Uae11 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Uae11 (Urinary albumin excretion QTL 11) Rattus norvegicus

Symbol: Uae11
Name: Urinary albumin excretion QTL 11
RGD ID: 724564
Trait: urine albumin amount   (VT:0002871)    
Measurement Type: urine albumin level   (CMO:0000130)    
LOD Score: 5.7
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81347,354,258 - 94,285,672RGD_MAPPER_PIPELINE
mRatBN7.21359,492,522 - 77,046,890RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01364,501,351 - 82,995,671RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01355,560,677 - 87,877,411RGDRnor5.0
RGSC_v3.41346,269,934 - 80,482,429RGDRGSC3.4
RGSC_v3.11346,283,977 - 80,496,617RGD
Cross Type: intercross
Strains Crossed: SS/JrTol SHR/NHsd 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
Albuminuria  (IDA)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
albuminuria  (QTM)
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
SHR/NHsd  (IEA)
SS/JrTol  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Time-course genetic analysis of albuminuria in Dahl salt-sensitive rats on low-salt diet. Garrett MR, etal., J Am Soc Nephrol 2003 May;14(5):1175-87.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
41178723LOC120096460U6 spliceosomal RNA135985108759851186Rat
40945853LOC120096400small nucleolar RNA SNORA17136015142760151558Rat
41182485LOC120096405small nucleolar RNA SNORA17136032876360328895Rat
1592348Dram2-ps1DNA damage regulated autophagy modulator 2, pseudogene 1136041456560415364Rat
41401987LOC120096367U6 spliceosomal RNA136054177860541876Rat
9418531LOC103693673phosphoenolpyruvate carboxykinase [GTP], mitochondrial pseudogene136060900260610979Rat
41220427U3l6small nucleolar RNA U3 like 6136064539960645487Rat
41089389LOC120096178uncharacterized LOC120096178136095664060957991Rat
11389558LOC108352618endogenous retrovirus group K member 113 Gag polyprotein-like136113043561134600Rat
1592306Rpl29-ps13ribosomal protein L29, pseudogene 13136122183861223353Rat
2324512Smad2-ps2SMAD family member 2, pseudogene 2136138061361382079Rat
41193295LOC120096448U6 spliceosomal RNA136140368061403786Rat
41232549LOC120096420small nucleolar RNA SNORA17136144256361442671Rat
40929865LOC120096464U6 spliceosomal RNA136174148761741592Rat
67366Pla2g4aphospholipase A2 group 4A136187781862022261Rat
41297106Tmem208-ps1transmembrane protein 208, pseudogene 1136215434362155350Rat
6491293Ptgs2osprostaglandin-endoperoxide synthase 2, opposite strand136216000262163710Rat
620349Ptgs2prostaglandin-endoperoxide synthase 2136216393662172193Rat
41145416Moxl-ps1monooxygenase like, pseudogene 1136222634162229836Rat
3277Pdcphosducin136229728162371754Rat
1307830Odr4odr-4 GPCR localization factor homolog136236910962424287Rat
1310664Tprtranslocated promoter region, nuclear basket protein136242431262487502Rat
1308976Prg4proteoglycan 4136248725762504657Rat
1564772Hmcn1hemicentin 1136261546163084524Rat
41377638LOC120096425small nucleolar RNA U13136290295462903058Rat
41058689LOC120096437U4 spliceosomal RNA136316528463165394Rat
1589909Gapdh-ps93Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 93136324705363250921Rat
40993432LOC120096450U6 spliceosomal RNA136335918863359294Rat
1306290Ivns1abpinfluenza virus NS1A binding protein136342704063446701Rat
1308695Swt1SWT1 RNA endoribonuclease homolog136345249463509982Rat
1307890Trmt1ltRNA methyltransferase 1-like136351009763543268Rat
1305491Rnf2ring finger protein 2136355396463584047Rat
71088Niban1niban apoptosis regulator 1136367424063827748Rat
1561496Edem3ER degradation enhancing alpha-mannosidase like protein 3136385828263920538Rat
11419406Rpl23al9ribosomal protein L23A like 9136389499663895471Rat
41062024LOC120096277uncharacterized LOC120096277136395152963957170Rat
1309104C13h1orf21similar to human chromosome 1 open reading frame 21136398258764199676Rat
11508071LOC108352552uncharacterized LOC108352552136415925864169444Rat
41316423LOC120096366U6 spliceosomal RNA136424129164241348Rat
40997506LOC120096278uncharacterized LOC120096278136428266564287061Rat
11379461LOC108352553uncharacterized LOC108352553136432864964402638Rat
1308584Tsen15tRNA splicing endonuclease subunit 15136449021664505591Rat
1304702Colgalt2collagen beta(1-O)galactosyltransferase 2136452364164628295Rat
1308947Ralgdsl1ral guanine nucleotide dissociation stimulator like 1136463448964904170Rat
7657602LOC102551528uncharacterized LOC102551528136467371864682656Rat
1560256Apobec4apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4136488701964895053Rat
1311791Arpc5actin related protein 2/3 complex, subunit 5136490450464913413Rat
1587499Rpl15-ps10ribosomal protein L15, pseudogene 10136495126164952106Rat
1309424Ncf2neutrophil cytosolic factor 2136495562264986144Rat
1310761Smg7SMG7 nonsense mediated mRNA decay factor136498614565050698Rat
1586370Ppid-ps22peptidylprolyl isomerase D, pseudogene 22136507127565072221Rat
6500808Rpl15-ps5ribosomal protein L15, pseudogene 5136508136565082179Rat
1586357Rps2-ps37ribosomal protein S2, pseudogene 37136510007265100981Rat
1307331Nmnat2nicotinamide nucleotide adenylyltransferase 2136510595065277350Rat
41162937LOC120096279uncharacterized LOC120096279136513564165145949Rat
621053Lamc2laminin subunit gamma 2136528466465344164Rat
621052Lamc1laminin subunit gamma 1136537437265501492Rat
1305609Shcbp1lSHC binding and spindle associated 1 like136556886365599155Rat
1308548Dhx9DExH-box helicase 9136560232265639098Rat
1549702NplN-acetylneuraminate pyruvate lyase136565509965697464Rat
2321674S100a11-ps1S100 calcium binding protein A11, pseudogene 1136575661265759510Rat
3571Rgs8regulator of G-protein signaling 8136580470365848955Rat
1589741Rgs16regulator of G-protein signaling 16136588766865892862Rat
727933Rnaselribonuclease L136589499065910354Rat
1584051Rgsl1regulator of G-protein signaling like 1136591505265969846Rat
41086608LOC120096281heterogeneous nuclear ribonucleoprotein A3-like136594073265942250Rat
2710Glulglutamate-ammonia ligase136596905366035121Rat
735067Rgsl2hregulator of G-protein signaling like 2 homolog (mouse)136597369565974702Rat
1586783Teddm1btransmembrane epididymal protein 1B136600018866002536Rat
1593124Teddm1atransmembrane epididymal protein 1A136601744866018750Rat
41250377LOC120096282uncharacterized LOC120096282136612708666138232Rat
11417578Gng5-ps5G protein subunit gamma 5, pseudogene 5136618782366188322Rat
41032515LOC120096399small nucleolar RNA SNORA17136621940066219531Rat
41007714LOC120096284uncharacterized LOC120096284136622022266222911Rat
41188211Eif3m-ps1eukaryotic translation initiation factor 3, subunit M, pseudogene 1136622126266223067Rat
2322549Ccnb1ip1-ps3cyclin B1 interacting protein 1, pseudogene 3136631153466312300Rat
2323778Zfp648zinc finger protein 648136633709866344963Rat
2246Cacna1ecalcium voltage-gated channel subunit alpha1 E136657465967063443Rat
11511033LOC108352605ubiquitin-conjugating enzyme E2 G1 pseudogene136660363666607613Rat
7660382LOC10255266740S ribosomal protein S27-like136719741767197656Rat
7656010LOC102552819uncharacterized LOC102552819136725586867260117Rat
41265064LOC120096369U6 spliceosomal RNA136726326267263367Rat
69252Ier5immediate early response 5136727013467272226Rat
11442089LOC108352557uncharacterized LOC108352557136727525867284186Rat
1593291Mr1major histocompatibility complex, class I-related136729836267317985Rat
61915Stx6syntaxin 6136733232967378580Rat
1304622Kiaa1614KIAA1614 homolog136738891667427392Rat
1306554Xpr1xenotropic and polytropic retrovirus receptor 1136744120567585950Rat
7544266LOC102553685uncharacterized LOC102553685136762168967650996Rat
1561635Rps17l3ribosomal protein S17 like 3136768129567681991Rat
7606491LOC102547468uncharacterized LOC102547468136769957567702579Rat
1305030Acbd6acyl-CoA binding domain containing 6136772678667863392Rat
5128565LOC100526819deoxyuridine triphosphatase pseudogene136776429967765086Rat
1308044Lhx4LIM homeobox 4136787710967917219Rat
41042311LOC12009628660S ribosomal protein L37-like136789489667896073Rat
68957Qsox1quiescin sulfhydryl oxidase 1136794978067987434Rat
621162Cep350centrosomal protein 350136802332768164478Rat
41192305LOC120096287uncharacterized LOC120096287136803731568056961Rat
1561738Ifitm2-ps2interferon induced transmembrane protein 2, pseudogene 2136818713168187808Rat
628851Tor1aip1torsin 1A interacting protein 1136819668168226121Rat
735059Tor1aip2torsin 1A interacting protein 2136822522668256536Rat
1565760Fam163afamily with sequence similarity 163, member A136826286768341323Rat
41363484LOC120096289uncharacterized LOC120096289136829342868299278Rat
1598123Atp5f1c-ps3ATP synthase F1 subunit gamma, pseudogene 3136837544268377184Rat
1598107Eef1a1-ps15eukaryotic translation elongation factor 1 alpha 1, pseudogene 15136838982868391692Rat
1307078Tdrd5tudor domain containing 5136839418068447745Rat
620461Nphs2NPHS2 stomatin family member, podocin136844872068461312Rat
1566124Axdnd1axonemal dynein light chain domain containing 1136847195768544788Rat
621641Soat1sterol O-acyltransferase 1136855227468597529Rat
1590898Abl2ABL proto-oncogene 2, non-receptor tyrosine kinase136867370268770846Rat
41143873LOC120096449U6 spliceosomal RNA136868913868689244Rat
7677982Dclre1b-ps1DNA cross-link repair 1B, pseudogene 1136871882868720740Rat
1310101Tor3atorsin family 3, member A136876989368798738Rat
1311162Fam20bFAM20B, glycosaminoglycan xylosylkinase136880166368839979Rat
1592117Eno1l2enolase 1 like 2136890152168913658Rat
1311537Ralgps2Ral GEF with PH domain and SH3 binding motif 2136892467469104637Rat
1598128Angptl1angiopoietin-like 1136896318668981649Rat
1595460Tex35testis expressed 35136922047869232678Rat
7603387Clec20aC-type lectin domain containing 20A136923276969258134Rat
1307566Rasal2RAS protein activator like 2136927988269569161Rat
6488950Srsf6-ps2serine and arginine rich splicing factor 6, pseudogene 2136930786069311387Rat
15941772810025M15RiklRIKEN cDNA 2810025M15 gene like136956948569576111Rat
1304982Cryzl2crystallin zeta like 2136961260569655018Rat
621658Sec16bSEC16 homolog B, endoplasmic reticulum export factor136966575769727199Rat
40946709LOC120096393small nucleolar RNA SNORA48136978564869785786Rat
41187100LOC120096293uncharacterized LOC120096293136980137769886020Rat
708419Brinp2BMP/retinoic acid inducible neural specific 2137043100670532766Rat
727799Astn1astrotactin 1137053742370855440Rat
2325487Mir488microRNA 488137068306470683142Rat
1591785Pappa2pappalysin 2137087391871147874Rat
1596806Cdca4-ps1cell division cycle associated 4, pseudogene 1137111330571114442Rat
1304773Cop1COP1, E3 ubiquitin ligase137146716471561826Rat
9685080Mir1843bmicroRNA 1843b137155154871551609Rat
3886Tnrtenascin R137175171472172731Rat
2311260Kiaa0040KIAA0040 ortholog137227451972312103Rat
1306002Tnntenascin N137231916072386362Rat
41323203LOC120096295uncharacterized LOC120096295137238190372393438Rat
1309432Mrps14mitochondrial ribosomal protein S14137242916872434915Rat
1303146Cacybpcalcyclin binding protein137243748572447810Rat
1304620Rabgap1lRAB GTPase activating protein 1-like137246411473059845Rat
41304642LOC120096380small nucleolar RNA SNORA67137256813872568277Rat
1587949Gpr52G protein-coupled receptor 52137280026572804989Rat
41324919LOC120096410small nucleolar RNA SNORA17137286767072867801Rat
2321320Rpl7l1-ps1ribosomal protein L7-like 1, pseudogene 1137307053173071358Rat
1563512Rc3h1ring finger and CCCH-type domains 1137317407573245762Rat
11505411Bola2l2bolA family member 2 like 2137320381173207963Rat
1307404Serpinc1serpin family C member 1137325720873271476Rat
1308731Zbtb37zinc finger and BTB domain containing 37137327192073303427Rat
621549Gas5growth arrest specific 5137330361173306932Rat
41271594LOC120096384small nucleolar RNA SNORD74137330382973303909Rat
40994115LOC120096422small nucleolar RNA SNORD75137330431473304375Rat
41224292LOC120096374small nucleolar RNA SNORD24137330452573304606Rat
41102469LOC120096385small nucleolar RNA SNORD44137330513773305197Rat
41128275Snord78small nucleolar RNA, C/D box 78137330543173305496Rat
41337361LOC120096376small nucleolar RNA SNORD79137330581073305894Rat
41364214LOC120096386small nucleolar RNA snR60/Z15/Z230/Z193/J17137330606073306140Rat
41251985LOC120096383small nucleolar RNA SNORD47137330647673306553Rat
41168241Snord81Small nucleolar RNA SNORD81137330670073306776Rat
1308286Dars2aspartyl-tRNA synthetase 2 (mitochondrial)137330872673336558Rat
1311868Cenplcentromere protein L137333723573352115Rat
9398754LOC10369211540S ribosomal protein S10 pseudogene137335874773359425Rat
1309490Klhl20kelch-like family member 20137336345173408293Rat
1565820Slc9c2solute carrier family 9, member C2 (putative)137342468373524244Rat
1311153Ankrd45ankyrin repeat domain 45137342476673450466Rat
2322986Cox7c-ps1Cytochrome c oxidase subunit 7C, pseudogene 1137343219073432909Rat
7711400Tex50testis expressed 50137343337573438787Rat
71005Prdx6peroxiredoxin 6137352874673539295Rat
7594218LOC102552207uncharacterized LOC102552207137353833873558780Rat
1588198Actg1-ps4actin, gamma 1, pseudogene 4137365431373656160Rat
11487222Qrsl1l1glutaminyl-tRNA amidotransferase subunit QRSL1 like 1137369160573692616Rat
619816Tnfsf4TNF superfamily member 4137372332973746809Rat
40955712LOC120096296uncharacterized LOC120096296137378340873796165Rat
9340199LOC103692000uncharacterized LOC103692000137378404473833312Rat
1305066Tnfsf18TNF superfamily member 18137383347873907249Rat
1592116Gapdh-ps108Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 108137395020873951423Rat
7559320LOC102553985uncharacterized LOC102553985137411812174123585Rat
3880FaslgFas ligand137415151974172760Rat
735185SucoSUN domain containing ossification factor137419280874257896Rat
9391883LOC103692015uncharacterized LOC103692015137429587674307920Rat
1309106C13h1orf105similar to human chromosome 1 open reading frame 105137431332074356322Rat
1311337Pigcphosphatidylinositol glycan anchor biosynthesis, class C137434361974346148Rat
727949Dnm3dynamin 3137435904374838135Rat
7718449LOC102554129uncharacterized LOC102554129137436896574441367Rat
40983846LOC120096413small nucleolar RNA SNORA17137453667874536749Rat
41160019LOC120096419small nucleolar RNA SNORA17137453705474537152Rat
2325378Mir199a2microRNA 199a-2137458295474583063Rat
2325548Mir214microRNA 214137458837474588481Rat
4888566Mir3120microRNA 3120137458837674588492Rat
41319216LOC120096458U6 spliceosomal RNA137476459874764696Rat
7537425LOC102554073uncharacterized LOC102554073137483792274841823Rat
7706115LOC102555077uncharacterized LOC102555077137485050174853120Rat
1311526Mettl13methyltransferase 13, eEF1A N-terminus and K55137488615174899937Rat
41165488LOC120096299uncharacterized LOC120096299137491488974916011Rat
1309753Vamp4vesicle-associated membrane protein 4137491987274942791Rat
620430Myocmyocilin137497673074987128Rat
1566064Prrc2cproline-rich coiled-coil 2C137500399575073701Rat
7598395LOC102555487uncharacterized LOC102555487137514960175157370Rat
628601Fmo4flavin containing dimethylaniline monoxygenase 4137515468375172874Rat
2622Fmo1flavin containing dimethylaniline monoxygenase 1137518218475214439Rat
628600Fmo2flavin containing dimethylaniline monoxygenase 2137522114975244377Rat
1594389Hsp90aa1-ps13heat shock protein 90 alpha family class A member 1, pseudogene 13137525157375254102Rat
1559491Fmo6flavin containing monooxygenase 6137525661775288167Rat
619761Fmo3flavin containing dimethylaniline monoxygenase 3137530936775334915Rat
1564745Mroh9maestro heat-like repeat family member 9137538780075443118Rat
40929598LOC120096402small nucleolar RNA SNORA17137540782675407928Rat
9112028LOC10369202040S ribosomal protein S8 pseudogene137559070675593669Rat
628884Prrx1paired related homeobox 1137560077775671896Rat
41312610LOC120096300uncharacterized LOC120096300137566651575684794Rat
1584663Cct6a-ps8chaperonin containing Tcp1, subunit 6A (zeta 1), pseudogene 8137569179975693451Rat
1564990Gorabgolgin, RAB6-interacting137574567875762307Rat
1564106Ntmt2N-terminal Xaa-Pro-Lys N-methyltransferase 2137605068376093972Rat
1305191Kifap3kinesin-associated protein 3137612770276264654Rat
1308992Scyl3SCY1 like pseudokinase 3137627842876303038Rat
41306939LOC120096301uncharacterized LOC120096301137629502176297631Rat
1563470FirrmFIGNL1 interacting regulator of recombination and mitosis137630191476345842Rat
1306783Mettl18methyltransferase 18, RPL3 N3(tau)-histidine137634588876348798Rat
7603484LOC102555981uncharacterized LOC102555981137635116876367038Rat
1592115Ppid-ps19peptidylprolyl isomerase D, pseudogene 19137635887476365328Rat
1598005Ak2-ps2adenylate kinase 2, pseudogene 2137639204276392929Rat
3654Seleselectin E137640284176412741Rat
1561908Cops8-ps2COP9 signalosome subunit 8, pseudogene 1137641372176414261Rat
3655Sellselectin L137641696976436444Rat
3656Selpselectin P137647622976511846Rat
1589758F5coagulation factor V137651350976583106Rat
1308611Slc19a2solute carrier family 19 member 2137660197576616175Rat
1309708Ccdc181coiled-coil domain containing 181137662456776638224Rat
1562452Blzf1basic leucine zipper nuclear factor 1137664175776656977Rat
619880Nme7NME/NM23 family member 7137665730376786768Rat
2170Atp1b1ATPase Na+/K+ transporting subunit beta 1137678658076807096Rat
41056279LOC120096205uncharacterized LOC120096205137690473376910108Rat
41240085LOC120096206uncharacterized LOC120096206137692958176941817Rat
41216393LOC120096446U6 spliceosomal RNA137701156277011667Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
11115D13Mgh7418136202237462022792Ratregion
33796D13Mit3216137474185474742070Ratregion
34534D13Mgh5140136105793861058078Ratregion
33604D13Mit5244137474191674742160Ratregion
33733D13Mit2202135987440859874610Ratregion
36033D13Rat29164136490158664901750Ratregion
36197D13Rat42169137143707171437240Ratregion
37240D13Rat63103137704678777046890Ratregion
35392D13Rat28185136545068665450871Ratregion
36920D13Rat46224137402391874024211Ratregion
36920D13Rat46224137402398774024211Ratregion
37844D13Rat85136136906051969060785Ratregion
37844D13Rat85136136906064969060785Ratregion
37886D13Rat67213136417800064178213Ratregion
36506D13Rat32108137486211774862225Ratregion
36727D13Rat31163136394622063946383Ratregion
36779D13Rat43131137278878572788916Ratregion
35607D13Rat44139136836319368363334Ratregion
39942D13Rat137249136626377066263995Ratregion
38058D13Rat99208136457144964571657Ratregion
38170D13Rat61207136517047665170683Ratregion
40476D13Rat155146137189223171892377Ratregion
38396D13Rat77220136093329860933518Ratregion
38662D13Rat102127136504398065044107Ratregion
38968D13Rat69207137117426571174472Ratregion
38990D13Rat58259136826957668269837Ratregion
39544D13Rat138212136703781067038022Ratregion
41967D13Arb10228136105793161058159Ratregion
42995D13Rat151198136182562661825824Ratregion
42998D13Rat181219136343229863432517Ratregion
43000D13Rat182219136332902363329242Ratregion
42382D13Rat196222136523036065230582Ratregion
40754D13Rat130203136916318869163391Ratregion
41008D13Rat129359136640769766408058Ratregion
44552D9Wox21136137174568471745742Ratregion
45055D13Got43211136485477164854979Ratregion
45056D13Got42151136341081363410964Ratregion
45058D13Got41245136233172262331967Ratregion
45059D13Got48182136762913167629313Ratregion
45062D13Got55173137647835976478532Ratregion
45064D13Got51124136953576169535887Ratregion
45067D13Got111192137558793975588131Ratregion
45068D13Got52124137236924072369364Ratregion
45069D13Got53161137348495073485113Ratregion
45071D13Got57252137641583476416086Ratregion
45076D13Got58198137627400076274198Ratregion
67823D13Uwm7200135954483159545011Ratregion
625774D13Got45269136670682566707096Ratregion
60043D13Got40127136412360864123735Ratregion
60044D13Got44207136573458265734789Ratregion
60045D13Got46185136703775967037944Ratregion
60048D13Got50133136881268668812819Ratregion
62439D13Uia3236136564197465642207Ratregion
66505D13Mco2269136201766562017934Ratregion
66515D13Mco7203137668814976688352Ratregion
66516D13Mco8191136092898860929179Ratregion
66721D13Mco23165136622671166226876Ratregion
66724D13Mco24607136105580161056408Ratregion
66727D13Mco25104136202545362025557Ratregion
1631857D13Uwm9193137207760172077794Ratregion
1627547D13Sunn1771211136442974164429952Ratregion
1627549D13Sunn1115211136093326360933474Ratregion
1627555D13Sunn1164257136123468361234940Ratregion
1635235D13Wox23203136584637765846580Ratregion
1635571D13Got238226136632697966327298Ratregion
1635571D13Got238226136632707266327298Ratregion
1636454D13Got234266136266337262663638Ratregion
1636872D13Got266252136957175569572007Ratregion
1637629D13Got23387137575828875758375Ratregion
1637645D13Wox25148137680490776805053Ratregion
7193088AA892455111136825366468253775Ratregion
7193105AW53157297136749733367497430Ratregion
7192475Ptgs2585136216841562169644Ratregion
7191290D13Arb10228136105793161058159Ratregion
7206446Glul999136603346866034467Ratregion
5039228RH127586215136491301464913227Ratregion
5039228RH127586215136491301464913229Ratregion
5039072RH127496191136382744763827638Ratregion
5036897AU049551233136626269266262925Ratregion
5037219AW10749681137330906273309143Ratregion
5035520LAMC2450136529945865299908Ratregion
5033989RH140936180137488650874886688Ratregion
5026084RH130849202137630261976302821Ratregion
5031498AU048126153137688856376888716Ratregion
5028801RH142379167137156126071561427Ratregion
5029025RH143231114136344457563444689Ratregion
5034438AI511465168136326445263264620Ratregion
5026746RH133375206137419302874193234Ratregion
5029239RH144043170136247662262476792Ratregion
5034702AA818930216136603458466034799Ratregion
5035060RH71332190136660680966606999Ratregion
5026928RH134073180136769591667696096Ratregion
5027022RH134433187136855402068554207Ratregion
5029629BE101794153136517901865179171Ratregion
5027201AI17322291137658079176580882Ratregion
5029821BF387596197136584475965844956Ratregion
5029877BE097200156136776644767766603Ratregion
5032663RH134836205136468235564682560Ratregion
5030059AW531572151136749740867497559Ratregion
5032739RH135123171136819584968196020Ratregion
5032827RH135448201137681178476811985Ratregion
5035224BQ201960174136757789467578068Ratregion
5030095BE110240185136657551666575701Ratregion
5030301AA87546191136560254265602633Ratregion
5030361AW533876164137096445370964617Ratregion
5033133RH137718123137574605375746176Ratregion
5033423RH138779222137569593775696159Ratregion
5033473RH138961821136248759262488413Ratregion
5025544RH128731180136216004762160227Ratregion
5028210D1Mit513187136398983363990020Ratregion
5030833BE120575152137280033172800483Ratregion
5033573RH139320207136892870568928912Ratregion
5030987BF411935187136238992062390107Ratregion
5031033BE121283196136242216462422360Ratregion
5033707RH139822214137330665673306870Ratregion
5033721RH139873210137265844572658655Ratregion
5031141BE116196161137458337474583535Ratregion
5051128RH134456197136080872060808919Ratregion
5053529RH142701163136585131065851473Ratregion
5056269RH144281149136744197267442121Ratregion
5053803RH142860104136660202766602131Ratregion
5056497RH144412114136419785264197966Ratregion
5054403RH143204100137634792076348020Ratregion
5057087AI501420190136737968167379871Ratregion
5055449RH143807153136560922165609374Ratregion
5054697RH143373131136544316665443297Ratregion
5057564BI283117153137530987275310025Ratregion
5055563RH143873619136603268466033303Ratregion
5055663RH143930147137629561876295765Ratregion
5054747RH143402122137043124870431370Ratregion
5057984BF386407150137681924176819391Ratregion
5058034BE101815175136723589967236074Ratregion
5055091RH143600284136355458863554872Ratregion
5059560BI291402214136382916063829374Ratregion
5059626BF394040104137206423672064340Ratregion
5056427RH144372106137605255776052663Ratregion
5058872BF393780119137243801472438133Ratregion
5052893RH142335150136575671465756864Ratregion
5058412BI290079177136411854464118721Ratregion
5059380AW530514194136683549566835689Ratregion
5057554BE095552153136238908162389234Ratregion
5053633RH142761244136584852565848769Ratregion
5051048RH134407183137352823073528413Ratregion
5050234RH133938206137522188075222086Ratregion
5051162RH134475187136802345068023637Ratregion
5051292RH134550195136824064268240837Ratregion
5050622RH134163181136738909567389276Ratregion
5041756RH129040157137231187772312034Ratregion
5041916RH129133180136355489563555075Ratregion
5044794RH130807200136657478066574980Ratregion
5041006RH128609207136345267163452878Ratregion
5045314RH131107220137488618674886406Ratregion
5043862RH130270153136855266268552815Ratregion
5045624RH131284201136824225168242452Ratregion
5045692RH131324210137661584276616052Ratregion
5041718RH129018151136898139468981545Ratregion
5046390RH131725333136327893363279266Ratregion
5044450RH130610200137626445476264654Ratregion
5044896RH130865189137515483575155024Ratregion
5045462RH131192203136855144868551651Ratregion
5047456RH132338189136892479868924987Ratregion
5045962RH131479218136398270663982924Ratregion
5047626RH132436202137436372974363931Ratregion
5047902RH132595217137651150776511724Ratregion
5047948RH132621219137522446075224679Ratregion
5049362RH133437642136248675562487397Ratregion
5048196RH132763201137680003176800232Ratregion
5048290RH132818180137494883774949017Ratregion
5048334RH132843186136239492662395112Ratregion
5049320RH133413194136565537865655572Ratregion
5049678RH133618199136528081565281014Ratregion
5048356RH132856206137331117373311379Ratregion
5048386RH132874184136880381868804002Ratregion
5042298RH129354197136528486465285061Ratregion
5040266RH128185196137434593074346126Ratregion
5039366RH127665296136354265963542955Ratregion
5042094RH129235200137396279273962992Ratregion
5042094RH129235200137396279273962992Ratregion
5042206RH129301194136819672268196916Ratregion
5042390RH129407213137327204973272262Ratregion
5042442RH129436208136855237868552586Ratregion
5040652RH128406192136537448865374680Ratregion
5040758RH128466216136737826767378483Ratregion
5043406RH130007206137345024773450453Ratregion
5040100RH128089196137352876873528964Ratregion
5040182RH128136200137518223875182438Ratregion
5043922RH130307191137324125273241443Ratregion
5040548RH128346184136657742966577613Ratregion
5072532RH136904213136248897562489188Ratregion
5072700RH137002180137560096175601141Ratregion
5075202RH138458170136550214965502319Ratregion
5072216RH136720163136585131265851475Ratregion
5075950RH138891206136734081067341016Ratregion
5076558RH139246236136491299364913227Ratregion
5076558RH139246236136491299364913229Ratregion
5076646RH139296134136519892065199054Ratregion
5076878RH139431149137492625474926403Ratregion
5077044RH139527196137085497970855175Ratregion
5076914RH139452143136794979867949941Ratregion
5077116RH139570183137344949573449678Ratregion
5077200RH139620191136957587869576069Ratregion
5075600RH138688121137434593074346051Ratregion
5079534RH141053207137243459572434802Ratregion
5077220RH139631209137493907874939287Ratregion
5077270RH139660203136825610268256305Ratregion
5076892RH139439245137493904274939287Ratregion
5077808RH139971183137643606276436245Ratregion
5076438RH139175123136382689063827013Ratregion
5076554RH139243220137567058975670809Ratregion
5078344RH140286192136603385066034042Ratregion
5079786RH141202217137087682170877038Ratregion
5077990RH140078195136579139865791593Ratregion
5080204RH141445210137523594775236157Ratregion
5078372RH140304187136528538465285571Ratregion
5070624RH134609211136819532568195536Ratregion
5070694RH134650212137156152171561733Ratregion
5073142RH137263183137055510370555286Ratregion
5079256RH140870198136041513760415335Ratregion
5071186RH134937150137335188673352036Ratregion
5070722RH134667205136355424963554454Ratregion
5070782RH134702197137494253374942730Ratregion
5072054RH135438198136239159062391788Ratregion
5074252RH137909120137217249672172616Ratregion
5074372RH137979219137574925575749474Ratregion
5071298RH135002207137630155876301765Ratregion
5071468RH135099189136589260065892789Ratregion
5074628RH138126220136925245969252679Ratregion
5065094AI044307188137324542173245609Ratregion
5066856AU048110127136134886161348988Ratregion
5067040AU048001173136864543368645606Ratregion
5067438AU047744162137256662972566791Ratregion
5067634AU047627200137120177971201979Ratregion
5067984AU047419217136826684568267064Ratregion
5068098AU047349173137600636176006534Ratregion
5068270AU047247177136338934863389525Ratregion
5068576AU047062193137586619475866387Ratregion
5068716AU046977220137551437075514592Ratregion
5070089RH94466195137678709676787291Ratregion
5070133RH9449190137651170976511799Ratregion
5069002AU046789181137044163770441813Ratregion
5069038AU046763276136983484069835116Ratregion
5060064BI285975129136239611562396244Ratregion
5060332AW531480159137211615672116315Ratregion
5063512BF404302172136585132165851493Ratregion
5065862AA997206150137323869273238842Ratregion
5065916BE116085180137353384373534023Ratregion
5063484BF398919159136354340063543559Ratregion
5062810AW534587198137458625774586455Ratregion
5064368BF399136175136892496568925140Ratregion
5064408BI302115159136609536166095520Ratregion
5061162BE111027159136744445767444616Ratregion
5061168AI603613216136346304163463257Ratregion
5064486BE108065168136970553669705704Ratregion
5066164AA925877103136876923468769337Ratregion
5061186BI293319100137516910775169207Ratregion
5063002BI289144204137114489571145099Ratregion
5063310BF398732131137419373374193864Ratregion
5084268AI013385215136732670867326923Ratregion
5086931AA801206216136876925268769468Ratregion
5082059BF41582995136582517565825270Ratregion
5082209BI274170170136880197968802149Ratregion
5082413BE119343173136670870066708873Ratregion
5086578BM386596162135990284059903002Ratregion
5087718Cacna1e124136689461466894738Ratregion
5087779D12Wsu95e236136432016864320408Ratregion
5082803BF390143150137664151576641665Ratregion
5082965BF390503168136398888263989050Ratregion
5089863AU049408171137267449472674668Ratregion
5088203AU048429103136940260869402711Ratregion
5089309AU049079217136143446961434686Ratregion
5090873AU050020118137660157076601688Ratregion
5083843AA892455180136825375668253936Ratregion
5089597AU049250254137310243773102691Ratregion
5084486AI176842154136925898169259135Ratregion
5084578AI169813110137531699475317104Ratregion
5084254AI169212113136463454664634659Ratregion
5082097BF409484216136688833466888550Ratregion
5084848AI235919149136855336768553516Ratregion
5084966AI172484142136603913966039281Ratregion
5082189BI280454215137330877773308992Ratregion
5082411BE119340205136826452168264726Ratregion
5085088AW533161175136355538763555562Ratregion
5085323BE095909192136739883867399030Ratregion
5088343AU048512168136935728269357452Ratregion
5088537AU048628253137362579173626044Ratregion
5085377BQ200675196137439893774399133Ratregion
5088927AU048853257136464501464645272Ratregion
5090053AU049522150136189705661897206Ratregion
5089151AU048985261137261948472619745Ratregion
5082503BE119592161137429166374291824Ratregion
5086008BE099794215137324427373244488Ratregion
5086018BQ199714218136725981067260028Ratregion
5081144RH141990193137626357776263770Ratregion
5085165BE095671162136527969765279859Ratregion
5083519BI282517164136880176268801926Ratregion
5086731AA850497180137626386676264046Ratregion
5081707BG371888225136237133162371556Ratregion
5085740BF388095180136513212565132305Ratregion
5085796BM385036159136962204169622200Ratregion
5083781AA800783142137437999374380135Ratregion
5503384MN291551137170059671702147Ratregion
5507721D11S4178803136725637767257180Ratregion
5504530PMC27868P2662136216841362169075Ratregion
5505208Serpinc1226137326342773264975Ratregion
5505974UniSTS:49674091136727124567271336Ratregion
5499491stSG598014355137231500572315360Ratregion
5499721UniSTS:234254362137574571875746081Ratregion
5500985PMC109273P1387137330348573303872Ratregion
5500735AFM310VE11531137542868775430218Ratregion
5503674Tdrd51130136842658068427710Ratregion
5503894Ptgs2146136216788162168027Ratregion
5504686PMC48141P4775137498570074986475Ratregion
5504690PMC48141P5200137498627574986475Ratregion
5502720SOAT1583136855566668556249Ratregion
6893264D13Hmgc2086196136313796863138162Ratregion
6893266D13Hmgc614199136953576569535964Ratregion
6893268D13Hmgc102201137018186570182068Ratregion
6893273D13Hmgc755209137048275770482966Ratregion
6893276D13Hmgc354225137059944770599672Ratregion
6893278D13Hmgc149217137107727671077493Ratregion
6893280D13Hmgc797178137168878071688958Ratregion
6893282D13Hmgc497225137163768971637916Ratregion
6893284D13Hmgc5885203137187008571870288Ratregion
6893286D13Hmgc170126137214580972145933Ratregion
6893288D13Hmgc885169137240294072403109Ratregion
6893290D13Hmgc665199137300290573003104Ratregion
6893292D13Hmgc664225137414491574145142Ratregion
6893294D13Hmgc486196137573670375736899Ratregion
6893296D13Hmgc871149137583427575834424Ratregion
Position Markers

Flank 1: (D13Wox5)
Rat AssemblyChrPosition (strand)Source
GRCr81347,354,258 - 47,354,444 (+)Marker Load Pipeline
Rnor_5.01355,560,677 - 55,560,862NCBI
RGSC_v3.41346,269,934 - 46,270,118RGD
RGSC_v3.11346,283,977 - 46,284,161RGD
RH 3.4 Map13173.5RGD
RH 3.4 Map13173.5UniSTS
RH 2.0 Map13376.9RGD
Cytogenetic Map13q13UniSTS
Peak: (D13Rat58)
Rat AssemblyChrPosition (strand)Source
GRCr81370,819,836 - 70,820,095 (+)Marker Load Pipeline
mRatBN7.21368,269,576 - 68,269,837 (+)MAPPER
Rnor_6.01373,748,382 - 73,748,640NCBI
Rnor_5.01378,673,431 - 78,673,689UniSTS
RGSC_v3.41371,116,479 - 71,116,738RGD
RGSC_v3.41371,116,480 - 71,116,738UniSTS
RGSC_v3.11371,130,667 - 71,130,926RGD
Celera1368,132,197 - 68,132,455UniSTS
SHRSP x BN Map1326.0398RGD
SHRSP x BN Map1326.0398UniSTS
FHH x ACI Map1330.44RGD
Cytogenetic Map13q21UniSTS
Flank 2: (D13Rat63)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21377,046,787 - 77,046,890 (+)MAPPER
Rnor_6.01382,995,569 - 82,995,671NCBI
Rnor_5.01387,877,309 - 87,877,411UniSTS
RGSC_v3.41380,482,327 - 80,482,429UniSTS
RGSC_v3.41380,482,326 - 80,482,429RGD
RGSC_v3.11380,496,515 - 80,496,617RGD
Celera1376,764,693 - 76,764,795UniSTS
RH 3.4 Map13487.9RGD
RH 3.4 Map13487.9UniSTS
RH 2.0 Map13562.3RGD
SHRSP x BN Map1332.2899RGD


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1298066Bp159Blood pressure QTL 1590.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134608804691088046Rat
10755495Bp387Blood pressure QTL 3873.78arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133466346187525369Rat
6893344Cm79Cardiac mass QTL 791.50.04heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)134372077062022792Rat
1354655Bp241Blood pressure QTL 2413.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1356056920101056920Rat
8655951Rf63Renal function QTL 6312.2blood urea nitrogen amount (VT:0005265)plasma urea nitrogen level (CMO:0000586)136906051977046890Rat
70220Bp55Blood pressure QTL 555.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133737450982374509Rat
8655945Rf61Renal function QTL 613.6blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)136906051986800898Rat
71119Thym2Thymus enlargement QTL 23.8thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)134619797684753113Rat
61391Bp5Blood pressure QTL 55.6arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)132230187567301875Rat
4889861Pur29Proteinuria QTL 2913.80.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)133741558480753406Rat
1331783Bp221Blood pressure QTL 2213.72886arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)136906051986800898Rat
8655959Pur32Proteinuria QTL 328.4urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)137402391897213863Rat
631645Bp121Blood pressure QTL 1213.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131491565559915655Rat
12879441Bp396Blood pressure QTL 396arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134569998390699983Rat
2293687Bss26Bone structure and strength QTL 264.60.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1365103704106807694Rat
1300166Kidm6Kidney mass QTL 63.93kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)136906051986800898Rat
619615Bp80Blood pressure QTL 800.0354arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133975454484754544Rat
2303028Bp329Blood pressure QTL 329arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)135849787273485113Rat
1581570Eae17Experimental allergic encephalomyelitis QTL 174.1nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)138897350101631289Rat
70170Eae14Experimental allergic encephalomyelitis QTL 140.0024nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)132320344868203448Rat
61340Bp25Blood pressure QTL 254.20.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133453521879535218Rat
1581573Uae36Urinary albumin excretion QTL 36urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13599483377046787Rat
1549897Stresp12Stress response QTL 123.35stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)133843340883433408Rat
724564Uae11Urinary albumin excretion QTL 115.7urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)135949252277046890Rat
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1320605871101339738Rat
7387280Uae43Urinary albumin excretion QTL 435.690.4174urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1366451204106807694Rat
738027Lnnr6Liver neoplastic nodule remodeling QTL 63.3liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)137486211785581182Rat
738026Lnnr5Liver neoplastic nodule remodeling QTL 53.29liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)135987440885581182Rat
1558644Cm45Cardiac mass QTL 453.60.002heart mass (VT:0007028)heart wet weight (CMO:0000069)132369296968692969Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)133124133193395974Rat
2293702Bss34Bone structure and strength QTL 344.610.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1365103704106807694Rat
61349Bp31Blood pressure QTL 315.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133737450982374509Rat
2303563Bw89Body weight QTL 896body mass (VT:0001259)body weight (CMO:0000012)133228447177284471Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1330395351101056920Rat
1581554Pur11Proteinuria QTL 11urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13599483377046787Rat
12879477Bp401Blood pressure QTL 401arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133726209282262092Rat
1331750Bp220Blood pressure QTL 2202.98arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133741558482415584Rat
6893338Cm76Cardiac mass QTL 7600.99heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)132369296968692969Rat
1641901Alcrsp6Alcohol response QTL 6response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)135236217197362171Rat
12879475Bp400Blood pressure QTL 400arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1361825626106807694Rat
11530006Niddm72Non-insulin dependent diabetes mellitus QTL 720.001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)137402391880753406Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131101056920Rat
9589164Gluco66Glucose level QTL 666.670.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)131515872260158722Rat
2293341Glom15Glomerulus QTL 159.1kidney glomerulus integrity trait (VT:0010546)kidney sclerotic glomeruli count to total glomeruli count ratio (CMO:0001269)1374862117101339893Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Uae11

RGD Curation Notes
Note Type Note Reference
qtl_cross_pair SS/JrMcoxSHR/NHsd  
qtl_cross_type intercross  
qtl_general SS allele associated with increased urinary albumin excretion at 8 weeks of age 634617