Uae16 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Uae16 (Urinary albumin excretion QTL 16) Rattus norvegicus

Symbol: Uae16
Name: Urinary albumin excretion QTL 16
RGD ID: 724515
Trait: urine albumin amount   (VT:0002871)    
Measurement Type: urine albumin excretion rate   (CMO:0000757)    
LOD Score: 8.0
P Value: Not Available
Variance: 8.0
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2958,163,035 - 100,929,646RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0963,270,073 - 107,878,387RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0963,077,544 - 107,462,655RGDRnor5.0
RGSC_v3.4955,476,135 - 99,799,760RGDRGSC3.4
RGSC_v3.1955,623,117 - 100,009,240RGD
Cross Type: intercross
Strains Crossed: SS/Jr SHR/FubRkb 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
Albuminuria  (IDA)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
albuminuria  (QTM)
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
SHR/FubRkb  (IEA)
SS/Jr  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Early onset albuminuria in Dahl rats is a polygenetic trait that is independent from salt loading. Poyan Mehr A, etal., Physiol Genomics 2003 Aug 15;14(3):209-16.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1311885Hsfy2heat shock transcription factor, Y linked 295818241558183828Rat
1562369Satb2SATB homeobox 295834802758534256Rat
41377830LOC120094880U7 small nuclear RNA95842251458422570Rat
7574954LOC102549320uncharacterized LOC10254932095852723658603337Rat
41273883LOC120094688uncharacterized LOC12009468895889810858899892Rat
7505088LOC102549484uncharacterized LOC10254948495889970458949945Rat
1306941C9h2orf69similar to human chromosome 2 open reading frame 6995894982158958456Rat
1311269Tyw5tRNA-yW synthesizing protein 595896110058979188Rat
1303159Maip1matrix AAA peptidase interacting protein 195897890158986831Rat
41313489LOC120094912small nucleolar RNA SNORA1795899507858995205Rat
1590802Rpl6-ps7ribosomal protein L6, pseudogene 795908227059083124Rat
11493513LOC108351935uncharacterized LOC10835193595910533959149851Rat
1309930Spats2lspermatogenesis associated, serine-rich 2-like95931994959493864Rat
41260367LOC120094689uncharacterized LOC12009468995934920359351098Rat
11470202LOC10835193660S ribosomal protein L30-like95935380059354253Rat
1564820Kctd18potassium channel tetramerization domain containing 1895950222059566857Rat
41052886LOC120094872U6 spliceosomal RNA95954434359544444Rat
1308450Sgo2shugoshin 295954860559573229Rat
620528Aox1aldehyde oxidase 195957962159658772Rat
41096022LOC120094690uncharacterized LOC12009469095965508059658278Rat
1359328Aox3aldehyde oxidase 395966478459749701Rat
41013560LOC120094932small nucleolar RNA SNORA1795970150259701601Rat
41034877Ptp4a1-ps5protein tyrosine phosphatase 4A1, pseudogene 595973618059736701Rat
1311975Aox4aldehyde oxidase 495976123859818169Rat
11403437Rpl21l4ribosomal protein L21 like 495982107659823671Rat
1359668Aox2aldehyde oxidase 295982840359916175Rat
9134966LOC103690538uncharacterized LOC10369053895988788859901999Rat
735129Bzw1basic leucine zipper and W2 domains 195993067259944468Rat
1311469Clk1CDC-like kinase 195994777459959002Rat
631415Ppil3peptidylprolyl isomerase like 395996640559980147Rat
1310329Nif3l1NGG1 interacting factor 3 like 195998010160001490Rat
41352736LOC120094958U2 spliceosomal RNA95998629659986483Rat
1311844Orc2origin recognition complex, subunit 296000163160038301Rat
1309752Hycc2hyccin PI4KA lipid kinase complex subunit 296005688360129176Rat
7709066Banf1-ps3BAF nuclear assembly factor 1, pseudogene 396009990260100455Rat
1310737Ndufb3NADH:ubiquinone oxidoreductase subunit B396012924060139452Rat
620847CflarCASP8 and FADD-like apoptosis regulator96018533860236173Rat
6501057LOC100909946uncharacterized LOC10090994696019500760199453Rat
620945Casp8caspase 896026386360312542Rat
1359362Flacc1flagellum associated containing coiled-coil domains 196031558160343692Rat
41185075LOC120094796uncharacterized LOC12009479696034380860368188Rat
620915Trak2trafficking kinesin protein 296034853160414036Rat
1559449StradbSTE20 related adaptor beta96041418260433084Rat
41344301Trnav-aac15transfer RNA valine (anticodon AAC) 1596041537860415450Rat
1565450C2cd6C2 calcium dependent domain containing 696043492660530842Rat
41076818LOC120094795uncharacterized LOC12009479596045159160485960Rat
41122244LOC120094911small nucleolar RNA SNORA1796050905460509188Rat
1306705Tmem237transmembrane protein 23796053334860569253Rat
620016Mpp4MAGUK p55 scaffold protein 496056973460613035Rat
40979013LOC120094797mitochondrial intermembrane space import and assembly protein 40-like96058484160585260Rat
1310372Als2alsin Rho guanine nucleotide exchange factor ALS296061318260686394Rat
1562399Rps2-ps15ribosomal protein S2, pseudogene 1596069961560700505Rat
1306205Cdk15cyclin-dependent kinase 1596071078760803638Rat
41261015LOC120094798uncharacterized LOC12009479896090520160907409Rat
41189416LOC120094799uncharacterized LOC12009479996091928260922015Rat
2321905Fzd7frizzled class receptor 796093143360934252Rat
1562029Kiaa2012KIAA2012 homolog96096739861076596Rat
1306919Sumo1small ubiquitin-like modifier 196107879061108697Rat
1596173Set-ps16Set nuclear proto-oncogene, pseudogene 1696110895261113900Rat
620484Nop58NOP58 ribonucleoprotein96112093961144810Rat
41058289LOC120094899small nucleolar RNA SNORA4896112427761124421Rat
41160946Snord70small nucleolar RNA, C/D box 7096112597461126060Rat
40961944Snord70bsmall nucleolar RNA, C/D box 70B96112674561126828Rat
41128145Snord11bsmall nucleolar RNA, C/D box 11B96113716861137247Rat
41004670Snord11small nucleolar RNA, C/D box 1196113771561137798Rat
71082Bmpr2bone morphogenetic protein receptor type 296119271861307280Rat
1564239Dbi-ps3diazepam binding inhibitor, acyl-CoA binding protein, pseudogene 396133652861336927Rat
1307676Fam117bfamily with sequence similarity 117, member B96134028461418531Rat
41278460LOC120094801uncharacterized LOC12009480196139447061398897Rat
735110Ica1lislet cell autoantigen 1-like96141095961469884Rat
735072Wdr12WD repeat domain 1296147549861502762Rat
1306822Carfcalcium responsive transcription factor96150236861552433Rat
1594799Nbeal1neurobeachin-like 196157515461743896Rat
41335151Atp5mc2-ps1ATP synthase membrane subunit c locus 2, pseudogene 196174626061746688Rat
735221Cyp20a1cytochrome P450, family 20, subfamily a, polypeptide 196175580461805123Rat
628771Abi2abl-interactor 296182718661905703Rat
1308387Raph1Ras association (RalGDS/AF-6) and pleckstrin homology domains 196190747661990170Rat
7736852LOC102547711uncharacterized LOC10254771196204614362050985Rat
41364019LOC120094895small nucleolar RNA SNORA5196209395062094058Rat
41235983LOC120094692uncharacterized LOC12009469296214346762149952Rat
2299Cd28Cd28 molecule96216632462194674Rat
61975Ctla4cytotoxic T-lymphocyte-associated protein 496231887462325978Rat
620123Icosinducible T-cell co-stimulator96236807562406900Rat
1590313Psma7-ps3proteasome 20S subunit alpha 7, pseudogene 396241270962415587Rat
11385622LOC108351940uncharacterized LOC10835194096244344262466139Rat
7595922LOC102548093uncharacterized LOC10254809396275091462757597Rat
1593480Paics-ps7phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase, pseudogene 796290127462922952Rat
1584992Pard3bpar-3 family cell polarity regulator beta96303843564067178Rat
621442Nrp2neuropilin 296412281564238007Rat
7626358LOC102548410uncharacterized LOC10254841096438316264410799Rat
2321317Rpl37-ps5ribosomal protein L37, pseudogene 596441747564417847Rat
41384701LOC120094933small nucleolar RNA SNORA1796443688164436969Rat
1304808Ino80dINO80 complex subunit D96444707564514013Rat
7594970Nop16-ps2NOP16 nucleolar protein, pseudogene 296453634964546088Rat
1359670Ndufs1NADH:ubiquinone oxidoreductase core subunit S196454643064579751Rat
1311415Eef1b2eukaryotic translation elongation factor 1 beta 296458016364582737Rat
40960633Snord51small nucleolar RNA, C/D box 5196458173164581808Rat
41148168Snora41small nucleolar RNA, H/ACA box 4196458207064582201Rat
2728Cmklr2chemerin chemokine-like receptor 296458331064617883Rat
1560005Zdbf2zinc finger, DBF-type containing 296467297464748446Rat
2321064Cox5b-ps1cytochrome c oxidase subunit 5B, pseudogene 196479269464793077Rat
1305739Adam23ADAM metallopeptidase domain 2396486264965009718Rat
9235481Fam237afamily with sequence similarity 237 member A96502431265035051Rat
2320917Dytndystrotelin96503737865098549Rat
1307874Mdh1bmalate dehydrogenase 1B96512037065168008Rat
11476915LOC108351941dnaJ homolog subfamily A member 1 pseudogene96516520265166696Rat
1307883Fastkd2FAST kinase domains 296516614865188184Rat
11454381LOC108351943uncharacterized LOC10835194396522571165235289Rat
1588771Cpocarboxypeptidase O96531999665338250Rat
40959969LOC120094803Kruppel like factor 796543368365526372Rat
1306029Klf7KLF transcription factor 796543368365526372Rat
9211165LOC103690543uncharacterized LOC10369054396557369165585909Rat
41094824LOC120094693uncharacterized LOC12009469396559217365596677Rat
2320870Hmga1-ps2high mobility group AT-hook 1, pseudogene 296571420665715579Rat
11396265LOC108351945uncharacterized LOC10835194596575070565758684Rat
9375952LOC103690545small integral membrane protein 7-like96582536165826864Rat
620218Creb1cAMP responsive element binding protein 196590351165972562Rat
7651604Mettl21amethyltransferase 21A, HSPA lysine96593425365999964Rat
41294387LOC120094695uncharacterized LOC12009469596606187866071873Rat
1310683Ccnyl1cyclin Y-like 196607172166121742Rat
631406Fzd5frizzled class receptor 596611309666120276Rat
1307151Plekhm3pleckstrin homology domain containing M396616623366325332Rat
40943289LOC120094696uncharacterized LOC12009469696630022366302108Rat
2423Crygecrystallin, gamma E96642992466432521Rat
7688659LOC102552040uncharacterized LOC10255204096643336666440952Rat
2422Crygdcrystallin, gamma D96644205766443668Rat
2421Crygccrystallin, gamma C96645159166453626Rat
1584991Crygbcrystallin, gamma B96646146066463520Rat
1595217Crygacrystallin, gamma A96648217666484638Rat
41296899Trnap-agg73transfer RNA proline (anticodon AGG) 7396652953766529617Rat
2862Idh1isocitrate dehydrogenase (NADP(+)) 196653414666563703Rat
1592067Pikfyvephosphoinositide kinase, FYVE-type zinc finger containing96656374766657873Rat
620612Pth2rparathyroid hormone 2 receptor96670605066810601Rat
1596909Tcf19-ps1transcription factor 19, pseudogene 196698752466988262Rat
40952034LOC120094967U4 spliceosomal RNA96703546867035644Rat
1586353Crygfcrystallin, gamma F96744826567450429Rat
2323551Srek1-ps1splicing regulatory glutamic acid and lysine rich protein 1, pseudogene 196757132867632585Rat
3044Map2microtubule-associated protein 296772342267981886Rat
1309976Unc80unc-80 homolog, NALCN channel complex subunit96801194068190135Rat
1564890Rperibulose-5-phosphate-3-epimerase96819102768211295Rat
1590799Kansl1lKAT8 regulatory NSL complex subunit 1-like96821115168316992Rat
2011Acadlacyl-CoA dehydrogenase, long chain96833398168372149Rat
41315872LOC120094878U7 small nuclear RNA96836621168366273Rat
41388248LOC120094910small nucleolar RNA SNORA1796838151668381647Rat
1598796Myl1myosin, light chain 196843751468458256Rat
1590798Pum3-ps2pumilio RNA-binding family member 3, pseudogene 296848084668482298Rat
69416Lancl1LanC like glutathione S-transferase 196851505268548646Rat
2395Cps1carbamoyl-phosphate synthase 196861415368737037Rat
40939110LOC120094918small nucleolar RNA SNORA1796875681568756940Rat
620486Erbb4erb-b2 receptor tyrosine kinase 496952373370596743Rat
41176457LOC120094945U6atac minor spliceosomal RNA96986598769866117Rat
41400105LOC120094804uncharacterized LOC12009480496998441869994916Rat
11489282LOC10835200740S ribosomal protein S10 pseudogene97041881470419577Rat
41242467LOC120094697uncharacterized LOC12009469797064431670744273Rat
1562431Pced1bl1PC-esterase domain containing 1B like 197085955470861542Rat
1308686Ikzf2IKAROS family zinc finger 297104603871191296Rat
1565062Spag16sperm associated antigen 1697133300572252772Rat
41136363LOC120094917small nucleolar RNA SNORA1797134573571345862Rat
41009382Got2-ps1glutamic-oxaloacetic transaminase 2, pseudogene 197177349471780853Rat
7527018Tubb4b-ps4tubulin, beta 4B class IVb, pseudogene 497185965971861139Rat
41092498LOC120094902small nucleolar RNA SNORA4897215415872154301Rat
1565501Vwc2lvon Willebrand factor C domain containing 2 like97225279372448543Rat
621072Bard1BRCA1 associated RING domain 197261607072694553Rat
41027314LOC120094698uncharacterized LOC12009469897262095572634535Rat
1304586Abca12ATP binding cassette subfamily A member 1297282266172995748Rat
70879Atic5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase97316484673184897Rat
2624Fn1fibronectin 197319604473264695Rat
41139219LOC120094699uncharacterized LOC12009469997326650873283004Rat
7652959LOC102554186uncharacterized LOC10255418697326660673278080Rat
7702950LOC102554284nucleolar protein 56-like97328421273285074Rat
41159026LOC120094960U2 spliceosomal RNA97346505173465140Rat
40935986LOC120094700uncharacterized LOC12009470097352898173537576Rat
7704514LOC102554970uncharacterized LOC10255497097364905473665651Rat
1562333Mregmelanoregulin97378672773842081Rat
41218150LOC120094956U2 spliceosomal RNA97385677373856963Rat
11425109LOC108351947uncharacterized LOC10835194797386997373873989Rat
41294134LOC120094954U2 spliceosomal RNA97387425373874443Rat
40944823LOC120094955U2 spliceosomal RNA97388983873890028Rat
2321037Vdac2-ps1voltage-dependent anion channel 2, pseudogene 197389045073891132Rat
41065706LOC120094957U2 spliceosomal RNA97389401373894203Rat
70925Pecrperoxisomal trans-2-enoyl-CoA reductase97389787773926511Rat
1582820Tmem169transmembrane protein 16997392655373950679Rat
3976Xrcc5X-ray repair cross complementing 597395521674044020Rat
1590797Marchf4membrane associated ring-CH-type finger 497407843774196070Rat
7624990LOC102555358uncharacterized LOC10255535897409316074105239Rat
41314403Cks2-ps4CDC28 protein kinase regulatory subunit 2, pseudogene 497412763674133481Rat
1306134Smarcal1Swi/SNF related matrix associated, actin dependent regulator of chromatin, subfamily a-like 197423971874286156Rat
41274183LOC120094703uncharacterized LOC12009470397428912874292893Rat
2319947Rpl37aribosomal protein L37A97429884374300926Rat
41145026LOC120094849uncharacterized LOC12009484997435520874365786Rat
7694989LOC102547940uncharacterized LOC10254794097437430874378142Rat
2873Igfbp2insulin-like growth factor binding protein 297441557474442945Rat
2876Igfbp5insulin-like growth factor binding protein 597445237174464953Rat
41330207LOC120094704uncharacterized LOC12009470497452946374549684Rat
3884Tnp1transition protein 197459446374595072Rat
7642363LOC102548134uncharacterized LOC10254813497459518174603935Rat
1597333Rps8-ps13ribosomal protein S8, pseudogene 1397466460074685585Rat
7564863LOC102548232uncharacterized LOC10254823297470007674708768Rat
7679868LOC102548321uncharacterized LOC10254832197471261774729921Rat
41012662LOC120094705uncharacterized LOC12009470597472996474742441Rat
41020349Dnajb13-ps1DnaJ heat shock protein family (Hsp40) member B13, pseudogene 197480072574801412Rat
41090859LOC120094706uncharacterized LOC12009470697495780274965568Rat
11356775LOC108351950uncharacterized LOC10835195097496106574971838Rat
727910Pinclpregnancy induced noncoding RNA like97498284974999760Rat
11470012LOC108351952uncharacterized LOC10835195297507989475083779Rat
7648480LOC102554721L-lactate dehydrogenase B chain-like97509364775094902Rat
40950643LOC120094708uncharacterized LOC12009470897519349175225446Rat
40983397LOC120094901small nucleolar RNA SNORA4897531080075310942Rat
68427Tns1tensin 197549188675702853Rat
41102125Rps21-ps7ribosomal protein S21, pseudogene 797564047275640715Rat
1560678Rufy4RUN and FYVE domain containing 497570293775727719Rat
2906Cxcr2C-X-C motif chemokine receptor 297572949375735868Rat
2905Cxcr1C-X-C motif chemokine receptor 197576689475771079Rat
9281499LOC103690558uncharacterized LOC10369055897582005675820840Rat
1305848Arpc2actin related protein 2/3 complex, subunit 297582078275851471Rat
631400Gpbar1G protein-coupled bile acid receptor 197586075875863260Rat
1306281Aampangio-associated, migratory cell protein97586338275869188Rat
2300155PnkdPNKD metallo-beta-lactamase domain containing97586862075937126Rat
1359409Tmbim1transmembrane BAX inhibitor motif containing 197587183575889366Rat
1596071Catipciliogenesis associated TTC17 interacting protein97594596075953618Rat
1601463Slc11a1solute carrier family 11 member 197595719375968115Rat
1305629Ctdsp1CTD small phosphatase 197597369475979298Rat
2325394Mir26bmicroRNA 26b97597659675976680Rat
1307048Vil1villin 197599114176018860Rat
2319715Usp37ubiquitin specific peptidase 3797601886376118732Rat
41395376Trnap-agg59transfer RNA proline (anticodon AGG) 5997606777276067852Rat
1311495Cnot9CCR4-NOT transcription complex subunit 997608426976109111Rat
40985578Trnav-aac39transfer RNA valine (anticodon AAC) 3997609924176099313Rat
621025Plcd4phospholipase C, delta 497611552376158602Rat
1309648Zfp142zinc finger protein 14297614105376164784Rat
1359658Bcs1lBCS1 homolog, ubiquinol-cytochrome c reductase complex chaperone97616492576168940Rat
1311557Rnf25ring finger protein 2597617003776176924Rat
1307318Stk36serine/threonine kinase 3697617692276204423Rat
1594742Ttll4tubulin tyrosine ligase like 497622165976258219Rat
727915Cyp27a1cytochrome P450, family 27, subfamily a, polypeptide 197626465576294551Rat
1308698Prkag3protein kinase AMP-activated non-catalytic subunit gamma 397629571576304959Rat
1560357Ppia-ps15peptidylprolyl isomerase A, pseudogene 1597631300576314011Rat
1304559Wnt6Wnt family member 697632988276343523Rat
1307015Wnt10aWnt family member 10A97634993176362400Rat
1562530Cdk5r2cyclin-dependent kinase 5 regulatory subunit 297641625176417719Rat
628860FevFEV transcription factor, ETS family member97643916476443603Rat
628768Cryba2crystallin, beta A297644725076457968Rat
2325360Mir375microRNA 37597645791176457985Rat
1563002Cfap65cilia and flagella associated protein 6597645921176494199Rat
7506283LOC102549980uncharacterized LOC10254998097649418676502960Rat
620021IhhIndian hedgehog signaling molecule97650431576510532Rat
1359338Nhej1nonhomologous end-joining factor 197652632276622488Rat
2319343Atp5mc2l1ATP synthase membrane subunit c locus 2 like 197654937076549840Rat
1307402Slc23a3solute carrier family 23, member 397662262176633188Rat
735175Cnppd1cyclin Pas1/PHO80 domain containing 197663347576640164Rat
1306844Retreg2reticulophagy regulator family member 297664028276646400Rat
1306260Zfand2bzinc finger AN1-type containing 2B97666546676668447Rat
71077Abcb6ATP binding cassette subfamily B member 697666855476677263Rat
1310450Atg9aautophagy related 9A97667740376688050Rat
1359242Ankzf1ankyrin repeat and zinc finger peptidyl tRNA hydrolase 197668819476695162Rat
1309474Glb1lgalactosidase, beta 1-like97669332576705548Rat
629474Stk16serine/threonine kinase 1697670559176708859Rat
1359623Tuba4atubulin, alpha 4A97670961776714327Rat
7695235LOC102554903uncharacterized LOC10255490397671474776730584Rat
1591035Dnajb2DnaJ heat shock protein family (Hsp40) member B297673106076739278Rat
620777Ptprnprotein tyrosine phosphatase, receptor type, N97674101076756704Rat
40942445LOC120094712uncharacterized LOC12009471297674560976750739Rat
3555Resp18regulated endocrine-specific protein 1897676517976771824Rat
1583848Dnpepaspartyl aminopeptidase97679993176808841Rat
620686Desdesmin97685097976858695Rat
7559628LOC102550477uncharacterized LOC10255047797685832976873352Rat
2124Spegstriated muscle enriched protein kinase97686571476923170Rat
40998509LOC120094713uncharacterized LOC12009471397690245676921926Rat
1560644GmppaGDP-mannose pyrophosphorylase A97692672476934274Rat
11504586LOC108351955uncharacterized LOC10835195597693729576940926Rat
621068Asic4acid sensing ion channel subunit family member 497694153276962900Rat
41266346LOC120094714uncharacterized LOC12009471497694623276947900Rat
1359458Chpfchondroitin polymerizing factor97696317876967878Rat
1306073Obsl1obscurin like cytoskeletal adaptor 197696780276993771Rat
2319152Tmem198transmembrane protein 19897696807976974131Rat
2912Inhainhibin subunit alpha97699446576997366Rat
1305046Stk11ipserine/threonine kinase 11 interacting protein97701229777027989Rat
3712Slc4a3solute carrier family 4 member 397703624377053940Rat
40983058LOC120094715uncharacterized LOC12009471597711987877144297Rat
11451317LOC108351964uncharacterized LOC10835196497834128378353399Rat
11441754LOC108351966uncharacterized LOC10835196697840676678510208Rat
1564536RGD1564536similar to Cofilin, non-muscle isoform (Cofilin-1)97843364778434301Rat
11492101LOC108351965uncharacterized LOC10835196597851091578541993Rat
41245564LOC120094891small nucleolar RNA SNORA4397857850178578638Rat
1560587Epha4Eph receptor A497881546078958139Rat
41120957LOC120094716uncharacterized LOC12009471697889685178933600Rat
7521510LOC102551060uncharacterized LOC10255106097896537978982823Rat
41022835LOC120094905U1 spliceosomal RNA97935164579351807Rat
40973822LOC120094851uncharacterized LOC12009485197937539879380326Rat
9346176LOC103690559uncharacterized LOC10369055997939681379426093Rat
620431Pax3paired box 397956745579664042Rat
11455030LOC108351956RING finger protein 223-like97968147879684988Rat
40952464LOC120094975U6 spliceosomal RNA97975781579757917Rat
1565739Sgpp2sphingosine-1-phosphate phosphatase 297976265879884665Rat
1303210Farsbphenylalanyl-tRNA synthetase subunit beta97988785279947082Rat
1311644Mogat1monoacylglycerol O-acyltransferase 197998096379988513Rat
70552Acsl3acyl-CoA synthetase long-chain family member 398011516480164636Rat
7514331LOC102551819U3 small nucleolar RNA-associated protein 14 homolog B-like98012062280129166Rat
1302957Kcne4potassium voltage-gated channel subfamily E regulatory subunit 498024342980251533Rat
41018431Trnat-agu20transfer RNA threonine (anticodon AGU) 2098033471680334790Rat
619975Hdac1lhistone deacetylase 1-like98045261580454615Rat
41241510LOC120094717uncharacterized LOC12009471798064940180677567Rat
3626Scg2secretogranin II98080307480808646Rat
6499336Eef1a1-ps8eukaryotic translation elongation factor 1 alpha 1, pseudogene 898086618480867575Rat
40949615LOC120094936small nucleolar RNA SNORA1798087056180870674Rat
1566037Rpsa-ps11ribosomal protein SA, pseudogene 1198091006880912886Rat
1311772Ap1s3adaptor related protein complex 1 subunit sigma 398095040281009889Rat
1305996Wdfy1WD repeat and FYVE domain containing 198103485281092823Rat
1309556Mrpl44mitochondrial ribosomal protein L4498110665881111709Rat
11406805LOC10835203040S ribosomal protein S2 pseudogene98111517781116076Rat
3748Serpine2serpin family E member 298112474681188866Rat
1589866Fam124bfamily with sequence similarity 124 member B98151301881533621Rat
1308190Cul3cullin 398159264181670428Rat
1561963Dock10dedicator of cytokinesis 1098184359982101540Rat
1306139Rnf11l2ring finger protein 11-like 298218177982183568Rat
9171458Nyap2neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 298240679782658250Rat
41266326LOC120094719uncharacterized LOC12009471998316197583182540Rat
11449647LOC108352031glyceraldehyde-3-phosphate dehydrogenase pseudogene98336527983366295Rat
7570114LOC102553709uncharacterized LOC10255370998344640383484732Rat
2922Irs1insulin receptor substrate 198355296483605797Rat
1306477Rhbdd1rhomboid domain containing 198363003783748690Rat
41300199LOC120094721uncharacterized LOC12009472198382906283863252Rat
1305355Col4a4collagen type IV alpha 4 chain98383317383875436Rat
71085Col4a3collagen type IV alpha 3 chain98387584984004955Rat
1310230Mffmitochondrial fission factor98400779884036039Rat
1588633Tm4sf20transmembrane 4 L six family member 2098403871584052615Rat
41118077LOC120094722uncharacterized LOC12009472298404353984047154Rat
41192800LOC120094723uncharacterized LOC12009472398407402184082651Rat
1560041Agfg1ArfGAP with FG repeats 198412484584182615Rat
11476313LOC10835200460S ribosomal protein L30-like98426224084265380Rat
1311413Slc19a3solute carrier family 19 member 398427572284299368Rat
3646Ccl20C-C motif chemokine ligand 2098438903184391629Rat
1561436Daw1dynein assembly factor with WD repeats 198443555284472632Rat
1311951SphkapSPHK1 interactor, AKAP domain containing98450938384657582Rat
41106528LOC120094724uncharacterized LOC12009472498501268385038789Rat
1334135Or5ak27-ps1olfactory receptor family 5 subfamily AK member 27, pseudogene 198505117685051964Rat
41331248LOC120094919small nucleolar RNA SNORA1798517594485176070Rat
1560766Pid1phosphotyrosine interaction domain containing 198528433585503035Rat
1359385Dnerdelta/notch-like EGF repeat containing98558698585902461Rat
41173954LOC120094725uncharacterized LOC12009472598568638485693986Rat
1306607Trip12thyroid hormone receptor interactor 1298591669186043312Rat
1307870Fbxo36F-box protein 3698604252286107220Rat
1309675Slc16a14solute carrier family 16, member 1498611006686137546Rat
7595527LOC102550706uncharacterized LOC10255070698611970286126905Rat
40957244LOC120094727uncharacterized LOC12009472798613731486139788Rat
1310830Csprscomponent of Sp100-rs98616578386174596Rat
1310173Sp110SP110 nuclear body protein98620050386225355Rat
1306355Sp140SP140 nuclear body protein98622447286274724Rat
1359550Sp100SP100 nuclear antigen98631099086377036Rat
1563917A630001G21RiklRIKEN cDNA A630001G21 gene like98638177786405385Rat
9334462LOC103690562uncharacterized LOC10369056298640947386421040Rat
1565945Rps10-ps8ribosomal protein S10, pseudogene 898642216286422790Rat
1306390Cab39calcium binding protein 3998646309586524545Rat
1309503Itm2cintegral membrane protein 2C98654592786559745Rat
41289198LOC120094894U1 spliceosomal RNA98656550586565670Rat
1559828Gpr55G protein-coupled receptor 5598658490686640601Rat
1561755Srp14l1signal recognition particle 14 like 198664582986649077Rat
41119897LOC120094730uncharacterized LOC12009473098664897086663626Rat
1308164Spata3spermatogenesis associated 398666035286672272Rat
41266300LOC120094731uncharacterized LOC12009473198668501986707213Rat
2318569C9h2orf72similar to human chromosome 2 open reading frame 7298669176786699920Rat
621669Psmd1proteasome 26S subunit, non-ATPase 198670971486785213Rat
61801Htr2b5-hydroxytryptamine receptor 2B98673579386756638Rat
1305615Armc9armadillo repeat containing 998680279186928611Rat
7690483LOC102548542uncharacterized LOC10254854298689060086956019Rat
41055286Trnap-agg49transfer RNA proline (anticodon AGG) 4998693189386931965Rat
1310580B3gnt7UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 798695622086960171Rat
3153Nclnucleolin98699958887008112Rat
41013737Snora75small nucleolar RNA, H/ACA box 7598700024887000384Rat
41153847Snord20small nucleolar RNA, C/D box 2098700106887001147Rat
40940351Snord82small nucleolar RNA, C/D box 8298700451587004586Rat
619867Nmur1neuromedin U receptor 198703323187038070Rat
1564629Tex44testis expressed 4498707568487077102Rat
7714518LOC102548729uncharacterized LOC10254872998709320987102973Rat
41138001LOC120094734uncharacterized LOC12009473498709647687113703Rat
41309199LOC120094735uncharacterized LOC12009473598713565287154677Rat
61829Ptmaprothymosin alpha98717625187180333Rat
41178953LOC120094949small nucleolar RNA U1398719052987190633Rat
1306204Pde6dphosphodiesterase 6D98719298987237979Rat
40940829Trnav-aac37transfer RNA valine (anticodon AAC) 3798721626887216349Rat
1306918Cops7bCOP9 signalosome subunit 7B98723813287263967Rat
620850Nppcnatriuretic peptide C98732005187324251Rat
1560168Dis3l2DIS3-like 3'-5' exoribonuclease 298735540987736616Rat
2322949Nsa2-ps1NSA2 ribosome biogenesis factor, pseudogene 198759060687591465Rat
1583637Rpl21-ps1ribosomal protein L21, pseudogene 198763513387635684Rat
1565100Alpgalkaline phosphatase, germ cell98774872187761500Rat
2325055Alppalkaline phosphatase, placental98776584687768606Rat
2099Alpialkaline phosphatase, intestinal98777341187776877Rat
41363602LOC120094871U6 spliceosomal RNA98779243687792530Rat
621650Akp3alkaline phosphatase 3, intestine, not Mn requiring98780468087808715Rat
61806Ecel1endothelin converting enzyme-like 198781951687829154Rat
1563955Prss56serine protease 5698784280687859978Rat
2352Chrndcholinergic receptor nicotinic delta subunit98786241787870833Rat
2354Chrngcholinergic receptor nicotinic gamma subunit98787808587884193Rat
1307790Eif4e2eukaryotic translation initiation factor 4E family member 298788612687914470Rat
41329502LOC120094860U6 spliceosomal RNA98792549287925595Rat
1559565Efhd1EF-hand domain family, member D198793825987984917Rat
2318130Gigyf2GRB10 interacting GYF protein 298800121288127040Rat
41096162Trnav-aac33transfer RNA valine (anticodon AAC) 3398801670588016779Rat
621661Kcnj13potassium inwardly-rectifying channel, subfamily J, member 1398806300388071112Rat
1311447Snorcsecondary ossification center associated regulator of chondrocyte maturation98814051088145527Rat
1309055Ngefneuronal guanine nucleotide exchange factor98814695688244454Rat
3164Neu2neuraminidase 298821849488267356Rat
41139248LOC120094737uncharacterized LOC12009473798828213688287642Rat
2914Inpp5dinositol polyphosphate-5-phosphatase D98828768088392748Rat
1310631Atg16l1autophagy related 16-like 198842073788457530Rat
41229829Scarna6lsmall Cajal body-specific RNA 6 like98844206588442334Rat
41104869Scarna6small Cajal body-specific RNA 698845058488450846Rat
3619SagS-antigen visual arrestin98846779788508821Rat
1563309Dgkddiacylglycerol kinase, delta98851668688607349Rat
1309613Usp40ubiquitin specific peptidase 4098860792088678940Rat
1549771Ugt1a9UDP glucuronosyltransferase family 1 member A998869698188808465Rat
727833Ugt1a9-psUDP glycosyltransferase 1 family, polypeptide A9, pseudogene98871318488714042Rat
708474Ugt1a8UDP glucuronosyltransferase family 1 member A898872709488808465Rat
620950Ugt1a7cUDP glucuronosyltransferase 1 family, polypeptide A7C98873957788808465Rat
620949Ugt1a6UDP glucuronosyltransferase family 1 member A698874721388808465Rat
11517988LOC108351970uncharacterized LOC10835197098874889788759048Rat
1583689Ugt1a5UDP glucuronosyltransferase family 1 member A598876225088808465Rat
1594329Ugt1a4-psUDP glycosyltransferase 1 family, polypeptide A4, pseudogene98877258788773555Rat
1549728Ugt1a3UDP glycosyltransferase 1 family, polypeptide A398878032888808465Rat
1549741Ugt1a2UDP glucuronosyltransferase 1 family, polypeptide A298879121688808465Rat
1594215Dnajb3DnaJ heat shock protein family (Hsp40) member B398879554288796555Rat
3935Ugt1a1UDP glucuronosyltransferase family 1 member A198880134488808465Rat
1565687Mroh2amaestro heat-like repeat family member 2A98881451588862346Rat
1305846HjurpHolliday junction recognition protein98885337988867730Rat
1592977Ppid-ps21peptidylprolyl isomerase D, pseudogene 2198889168288893091Rat
620762Trpm8transient receptor potential cation channel, subfamily M, member 898889703988990167Rat
11512085LOC108351971uncharacterized LOC10835197198890685488909792Rat
40944180LOC120094914small nucleolar RNA SNORA1798899178588991916Rat
708488Spp2secreted phosphoprotein 298900685889026676Rat
7553846LOC102554187uncharacterized LOC10255418798906466489104187Rat
40983173LOC120094852uncharacterized LOC12009485298924012989242768Rat
1589685Arl4cADP ribosylation factor like GTPase 4C98930033589303770Rat
41275851LOC120094738uncharacterized LOC12009473898931119889324968Rat
41155597LOC120094739uncharacterized LOC12009473998932522289345530Rat
9102062LOC103690569uncharacterized LOC10369056998946099289469978Rat
11424261Gapdh-ps25Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 2598952514989526174Rat
41225257LOC120094740uncharacterized LOC12009474098956540589590849Rat
620219Sh3bp4SH3-domain binding protein 498966015689739163Rat
7548599LOC102554430uncharacterized LOC10255443098977724089781278Rat
41056788LOC120094980U6 spliceosomal RNA98978862789788730Rat
7737812LOC102554475uncharacterized LOC10255447598990182189920445Rat
1309244Agap1ArfGAP with GTPase domain, ankyrin repeat and PH domain 199003972090475196Rat
41232573LOC120094807uncharacterized LOC12009480799023271790241118Rat
621866Gbx2gastrulation brain homeobox 299050963390512212Rat
1310850Asb18ankyrin repeat and SOCS box-containing 1899053135090595953Rat
7663504LOC102554789uncharacterized LOC10255478999059597190640971Rat
1305311Iqca1IQ motif containing with AAA domain 199062673590742563Rat
620601Ackr3atypical chemokine receptor 399079968290811246Rat
7705608LOC102555030uncharacterized LOC10255503099084553190856417Rat
40967038LOC120094742uncharacterized LOC12009474299096632090990369Rat
7593803LOC102555145uncharacterized LOC10255514599097464190981811Rat
41035686LOC120094743uncharacterized LOC12009474399102931191033418Rat
1311404Cops8COP9 signalosome subunit 899120742791217258Rat
1308704Col6a3collagen type VI alpha 3 chain99136157891439434Rat
1310733Mlphmelanophilin99150741091542984Rat
628634Prlhprolactin releasing hormone99154312891549022Rat
1562478Rab17RAB17, member RAS oncogene family99155292491566759Rat
1359548Lrrfip1LRR binding FLII interacting protein 199159203291720250Rat
1566074Rbm44RNA binding motif protein 4499173115391756783Rat
61870Ramp1receptor activity modifying protein 199176548191816152Rat
1598338Pkm-ps10pyruvate kinase M1/2, pseudogene 1099182347291834122Rat
1307608Ube2fubiquitin-conjugating enzyme E2F (putative)99184597591881145Rat
1359514Sclyselenocysteine lyase99189026991910947Rat
1562432Espnlespin-like99191203891936803Rat
1309644Klhl30kelch-like family member 3099194247591952756Rat
1584688Erfeerythroferrone99195697191964846Rat
620128IlkapILK associated serine/threonine phosphatase99196644091988791Rat
6488392LOC100912214uncharacterized LOC10091221499199437591996238Rat
1312047Hes6hes family bHLH transcription factor 699200184992003562Rat
61945Per2period circadian regulator 299200728992049551Rat
1309252Traf3ip1TRAF3 interacting protein 199207362292110427Rat
41132162LOC120094985U6 spliceosomal RNA99208750692087608Rat
1310760Asb1ankyrin repeat and SOCS box-containing 199212033292140790Rat
7513527LOC102548291uncharacterized LOC10254829199216421992167303Rat
621286Twist2twist family bHLH transcription factor 299237474092419222Rat
7663763Rps27a-ps9ribosomal protein S27a, pseudogene 999242577992426321Rat
619979Hdac4histone deacetylase 499250346792750164Rat
40972669LOC120094890small nucleolar RNA SNORA4499260122092601359Rat
11410190LOC108351974uncharacterized LOC10835197499281772392865423Rat
727968Ndufa10NADH:ubiquinone oxidoreductase subunit A1099300703493041825Rat
41012887Spcs3-ps1signal peptidase complex subunit 3, pseudogene 199303549493038160Rat
1332746Or6b2olfactory receptor family 6 subfamily B member 299304847593049413Rat
1334214Or6b2bolfactory receptor family 6 subfamily B member 2B99305674093057675Rat
1334141Or6b3olfactory receptor family 6 subfamily B member 399307003193070969Rat
1333294Or9s23bolfactory receptor family 9 subfamily S member 23B99311732893118299Rat
1333345Or9s23olfactory receptor family 9 subfamily S member 2399313148393132454Rat
1333005Olr1348-psolfactory receptor pseudogene 134899313324693133449Rat
1333615Or9s27olfactory receptor family 9 subfamily S member 2799313663293146531Rat
1333489Or9s15olfactory receptor family 9 subfamily S member 1599314957393150544Rat
1333485Or9s14bolfactory receptor family 9 subfamily S member 14B99316024893161207Rat
1333070Or9s14olfactory receptor family 9 subfamily S member 1499317336093174328Rat
1333848Or9s13olfactory receptor family 9 subfamily S member 1399318459493194689Rat
1596701Cops9COP9 signalosome subunit 999320984393214774Rat
708465Otosotospiralin99321694893220614Rat
61853Gpc1glypican 199339623493424047Rat
9685085Mir149microRNA 14999341438993414477Rat
1595229Ankmy1ankyrin repeat and MYND domain containing 199342366493476651Rat
41317148LOC120094747uncharacterized LOC12009474799342929193434280Rat
1595220Dusp28dual specificity phosphatase 2899347283293474207Rat
1595210Rnpepl1arginyl aminopeptidase like 199347660093486331Rat
69354Capn10calpain 1099349813293510494Rat
40954341LOC120094865U6 spliceosomal RNA99351284493512931Rat
1309404Gpr35G protein-coupled receptor 3599352716593539573Rat
1562727Aqp12aaquaporin 12A99355452793560011Rat
1304996Kif1akinesin family member 1A99356303393647412Rat
2073Agxtalanine--glyoxylate aminotransferase99367538493685337Rat
1563692Mab21l4mab-21 like 499369045593701267Rat
41176099LOC120094749uncharacterized LOC12009474999369094793696037Rat
7728853Crocc2ciliary rootlet coiled-coil, rootletin family member 299370878693769617Rat
1566079Sned1sushi, nidogen and EGF-like domains 199377408793834003Rat
1562440Mterf4mitochondrial transcription termination factor 499383416293838838Rat
9112007LOC103690574ubiquitin-associated domain-containing protein 1 pseudogene99384071293842719Rat
1306146PaskPAS domain containing serine/threonine kinase99384427593886036Rat
7656325LOC102549694protein NYNRIN-like99387646993885044Rat
1308169Ppp1r7protein phosphatase 1, regulatory subunit 799388606893911198Rat
41293215LOC120094986U6 spliceosomal RNA99390673393906836Rat
1302987Ano7anoctamin 799391752493945323Rat
620962Hdlbphigh density lipoprotein binding protein99394809994018040Rat
40965981LOC120094809uncharacterized LOC12009480999398578693989762Rat
620056Septin2septin 299401814194051386Rat
1308003Farp2FERM, ARH/RhoGEF and pleckstrin domain protein 299405365094161982Rat
41266143LOC1200949515S ribosomal RNA99415679494156912Rat
727809Stk25serine/threonine kinase 2599416183494174095Rat
70984BokBCL2 family apoptosis regulator BOK99422349394234476Rat
1359473Thap4THAP domain containing 499424258194282312Rat
1309664Atg4bautophagy related 4B, cysteine peptidase99428241794314109Rat
1309614Dtymkdeoxythymidylate kinase99431555294324386Rat
1307908Ing5inhibitor of growth family, member 599432654994343392Rat
1307976D2hgdhD-2-hydroxyglutarate dehydrogenase99435055594368384Rat
1593854Gal3st2galactose-3-O-sulfotransferase 299438245694387990Rat
1308624Neu4neuraminidase 499439692094402576Rat
1311658Pdcd1programmed cell death 199441878694431945Rat
1309819Chchd2l3coiled-coil-helix-coiled-coil-helix domain containing protein 2-like 399450043994501110Rat
6490130Set-ps2Set nuclear proto-oncogene, pseudogene 299452574394574248Rat
1593789Noc3l-ps2NOC3-like DNA replication regulator, pseudogene 299461937094650913Rat
1592645Zfp207-ps1zinc finger protein 207, pseudogene 199471618294759721Rat
1592616Ahcy-ps2adenosylhomocysteinase, pseudogene 299489069494892294Rat
41348918LOC120094939small nucleolar RNA SNORA1799542152095421616Rat
9384454LOC10369058740S ribosomal protein S25 pseudogene99565867595659046Rat
1309973Fam174afamily with sequence similarity 174, member A99574281595761083Rat
41395183LOC120094750uncharacterized LOC12009475099581984395825054Rat
41233501LOC120094751uncharacterized LOC12009475199591321895960037Rat
621845St8sia4ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 499599013196084661Rat
41245914LOC120094752uncharacterized LOC12009475299620883596229501Rat
41069405LOC120094753uncharacterized LOC12009475399636047096409723Rat
41023977Czib-ps1CXXC motif containing zinc binding protein, pseudogene 199657454496583661Rat
41320137LOC120094925small nucleolar RNA SNORA1799712804597128175Rat
1303048Slco4c1solute carrier organic anion transporter family, member 4C199717749797229161Rat
7610058LOC102553020uncharacterized LOC10255302099722913997261503Rat
620278Slco6b1solute carrier organic anion transporter family member 6B199726665597347336Rat
41128648Gapdh-ps40Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 4099735703597358357Rat
1590183Slco6c1l-ps1solute carrier organic anion transporter family member 6c1 like, pseudogene 199740938897461111Rat
708431Slco6c1solute carrier organic anion transporter family, member 6c199750002897580776Rat
1359388Slco6d1solute carrier organic anion transporter family, member 6d199758309397739994Rat
1589682Tpt1-ps6tumor protein, translationally-controlled 1 pseudogene 699787450697875077Rat
41051343LOC120094586potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like99799691297998894Rat
3252Pampeptidylglycine alpha-amidating monooxygenase99799858198271966Rat
1307449Gin1gypsy retrotransposon integrase 199829359698315155Rat
1590765Ppip5k2diphosphoinositol pentakisphosphate kinase 299831522098394537Rat
41021246Trnap-agg31transfer RNA proline (anticodon AGG) 3199839748698397567Rat
1562136Macirmacrophage immunometabolism regulator99842076098440818Rat
11502495LOC108351978uncharacterized LOC10835197899844709698454842Rat
1560925Pdzph1PDZ and pleckstrin homology domains 199859122298729409Rat
1310902Nudt12nudix hydrolase 1299874162798755039Rat
11405256LOC108351976uncharacterized LOC10835197699885796198904468Rat
41236287LOC120094926small nucleolar RNA SNORA1799894837498948498Rat
1559955Rps17l2ribosomal protein S17 like 299909327299093890Rat
41202132LOC120094979U6 spliceosomal RNA99930440999304515Rat
41302765LOC120094754uncharacterized LOC12009475499951165699522408Rat
41281036LOC120094755uncharacterized LOC1200947559100320816100337741Rat
1585470Bmpr1a-ps1bone morphogenetic protein receptor type 1A, pseudogene 19100602229100605006Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10359D9Got10923298788122287881453Ratregion
10403D9Wox811896647532866475449Ratregion
10404D9Mit219896643705266437242Ratregion
10411D9Mgh414196745134667451485Ratregion
10807D9Wox1012397699412376994246Ratregion
10965D9Arb525798700863587008898Ratregion
33999D9Mit514297781389477814038Ratregion
34013D9Mit314495816286358163035Ratregion
34088D9Mgh211098636963186369743Ratregion
11296D9Arb312497594962675949750Ratregion
11312D9Bro116697702634377026453Ratregion
33688D9Mit717598920003589200212Ratregion
36009D9Rat5414998131436481314513Ratregion
36027D9Rat31349100929646100929786Ratregion
36059D15Rat3016297450771274507902Ratregion
36147D9Rat1514596538378965383934Ratregion
36155D9Rat913697739687677397012Ratregion
36340D9Mit1124897282990872830156Ratregion
37216D9Rat6720998838794388388152Ratregion
37218D9Rat6911696937159569371715Ratregion
37312D9Rat10010199465802494658115Ratregion
37522D9Rat8524696642120366421453Ratregion
35172D9Rat1912596228760862287724Ratregion
35555D9Rat813397690295476903085Ratregion
36803D9Rat5015099355248293552632Ratregion
36838D9Rat5116698451486184515030Ratregion
36908D9Rat414899205881192058970Ratregion
37002D9Rat5312898119923881199366Ratregion
37052D9Rat615798850705588507212Ratregion
37094D9Rat15620196411687264117084Ratregion
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Position Markers

Flank 1: (D9Rat3)
Rat AssemblyChrPosition (strand)Source
mRatBN7.29100,929,646 - 100,929,786 (-)MAPPER
Rnor_6.09107,878,387 - 107,878,528NCBI
Rnor_5.09107,462,655 - 107,462,796UniSTS
RGSC_v3.4999,799,760 - 99,799,902RGD
RGSC_v3.4999,799,761 - 99,799,902UniSTS
RGSC_v3.19100,009,240 - 100,009,382RGD
Celera998,358,237 - 98,358,378UniSTS
SHRSP x BN Map969.3899UniSTS
SHRSP x BN Map969.3899RGD
FHH x ACI Map977.9RGD
Peak: (D9Rat5)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2987,073,468 - 87,073,594 (+)MAPPER
Rnor_6.0993,442,819 - 93,442,944NCBI
Rnor_5.0993,170,879 - 93,171,004UniSTS
RGSC_v3.4985,186,768 - 85,187,066RGD
RGSC_v3.4985,186,878 - 85,187,003UniSTS
RGSC_v3.1985,370,187 - 85,370,485RGD
Celera984,488,965 - 84,489,071UniSTS
RH 2.0 Map9840.1RGD
SHRSP x BN Map956.8699RGD
FHH x ACI Map958.88RGD
Flank 2: (D9Mit3)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2958,162,863 - 58,163,035 (+)MAPPER
Rnor_6.0963,269,904 - 63,270,073NCBI
Rnor_5.0963,077,375 - 63,077,544UniSTS
RGSC_v3.4955,475,965 - 55,476,135RGD
RGSC_v3.4955,475,966 - 55,476,135UniSTS
RGSC_v3.1955,622,948 - 55,623,117RGD
Celera955,627,158 - 55,627,327UniSTS
RH 3.4 Map9484.1UniSTS
RH 3.4 Map9484.1RGD
RH 2.0 Map9554.4RGD
SHRSP x BN Map941.0298RGD
FHH x ACI Map939.0RGD
Cytogenetic Map9 RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
7411571Bw138Body weight QTL 13814.30.001body mass (VT:0001259)body weight gain (CMO:0000420)93253550577535505Rat
1300180Bw14Body weight QTL 143.776body mass (VT:0001259)body weight (CMO:0000012)92375402461381613Rat
724547Cm21Cardiac mass QTL 212.7heart mass (VT:0007028)calculated heart weight (CMO:0000073)979271511102910209Rat
11353957Bmd92Bone mineral density QTL 920.01tibia mineral mass (VT:1000283)volumetric bone mineral density (CMO:0001553)94611419991114199Rat
631680Cm11Cardiac mass QTL 113.10.00089heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)92043051965430519Rat
61385Edpm9Estrogen-dependent pituitary mass QTL 93.430.05pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)963869687108869687Rat
70218Cm28Cardiac mass QTL 288.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)92526804479271759Rat
724544Uae9Urinary albumin excretion QTL 94.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)925268044114175309Rat
1578760Cm53Cardiac mass QTL 533.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)956771635101771635Rat
631643Bp120Blood pressure QTL 12030.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)92207120067071200Rat
1581580Uae34Urinary albumin excretion QTL 34urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)96207227596470995Rat
1581517Bp284Blood pressure QTL 284arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)97665062976771824Rat
1354626Bvd1Brain ventricular dilatation QTL 13.730.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)975712843111552878Rat
7794784Mcs31Mammary carcinoma susceptibility QTL 312.98mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)977813894111552878Rat
12879506Pur33Proteinuria QTL 33urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)94464992189649921Rat
731164Uae25Urinary albumin excretion QTL 253.50.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)925661188100929786Rat
1598849Memor17Memory QTL 172.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)94996854671098346Rat
10058949Gmadr5Adrenal mass QTL 520.014adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)94279151387976209Rat
1578757Pur6Proteinuria QTL 63.30.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)96207227596470995Rat
4889943Bss90Bone structure and strength QTL 904.1tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)98636963192058970Rat
2303170Bp332Blood pressure QTL 3323.730.027arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)95584784177026453Rat
631656Bp108Blood pressure QTL 1085.970.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94859825193598251Rat
1582203Gluco19Glucose level QTL 193.30.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)992491589100929786Rat
724515Uae16Urinary albumin excretion QTL 168urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)958163035100929646Rat
731171Glom6Glomerulus QTL 62.80.0003kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)964573531109573531Rat
61352Bp34Blood pressure QTL 345arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94249534379271511Rat
8662828Vetf6Vascular elastic tissue fragility QTL 63.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)93696235992058970Rat
2303178Bp334Blood pressure QTL 3343.70.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)97927151191616855Rat
1598834Memor11Memory QTL 112.5exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)93696235977814038Rat
70186Niddm26Non-insulin dependent diabetes mellitus QTL 263.87blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)92207116986369743Rat
7207814Bmd91Bone mineral density QTL 913.5femur size trait (VT:1000369)femoral neck cross-sectional area (CMO:0001697)92375414483851531Rat
6903941Pur31Proteinuria QTL 310.036urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)94019418885194188Rat
2303180Bp333Blood pressure QTL 3330.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)95662771378595166Rat
2290450Scl57Serum cholesterol level QTL 574.15blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)93696235995410867Rat
11353949Bp393Blood pressure QTL 393arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94019418885194188Rat
11353951Bp394Blood pressure QTL 394arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94464992189649921Rat
10054125Srcrt7Stress Responsive Cort QTL 73.330.0011blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)9187073594Rat
1300134Bp185Blood pressure QTL 1853.73arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)961381434104821652Rat
4889852Pur26Proteinuria QTL 26150.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)977813894101597663Rat
1331757Cdexp1CD45RC expression in CD8 T cells QTL 14.3CD8-positive T cell quantity (VT:0008077)blood CD45RC(high) CD8 T cell count to CD45RC(low) CD8 T cell count ratio (CMO:0001990)9102453767509080Rat
7411656Foco26Food consumption QTL 269.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)93253550577535505Rat
1578659Tspe1Trichinella spiralis expulsion QTL 14.8parasite quantity (VT:0010441)logarithm of the intestinal adult Trichinella spiralis count (CMO:0002024)96138143465691299Rat
1641894Alcrsp12Alcohol response QTL 12response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)92746863972468639Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Uae16

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general SS allele associated with increased urinary albumin excretion at 4 weeks of age 634633