Gcr2 QTL Report (Rattus norvegicus) - Rat Genome Database
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QTL Registration

QTL: Gcr2 (Gastric cancer resistance QTL 2) Rattus norvegicus

Symbol: Gcr2
Name: Gastric cancer resistance QTL 2
RGD ID: 70203
Trait: stomach morphology trait   (VT:0000470)    
Measurement Type: stomach tumor susceptibility score   (CMO:0002043)    
LOD Score: 2.6
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.033,285,929 - 28,136,884RGD_MAPPER_PIPELINERnor6.0
Rnor_5.038,648,011 - 33,340,453RGDRnor5.0
RGSC_v3.434,010,230 - 23,762,628RGDRGSC3.4
RGSC_v3.134,010,230 - 23,659,000RGD
Cross Type: Not Available
Strains Crossed: ACI/N BUF/N 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method
necropsy  (IDA)

Vertebrate Trait

Rat Strain
ACI/N  (IEA)
BUF/N  (IEA)

References

References - curated
1. QTL data import from the RatMap database
2. Ushijima T, etal., Cancer Res 2000 Feb 15;60(4):1092-6.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3439Ptgs1prostaglandin-endoperoxide synthase 131556068515582339Rat
68417Ncs1neuronal calcium sensor 131055625010602672Rat
3610Rxraretinoid X receptor alpha362725606295354Rat
71076Lhx2LIM homeobox 232262867422658447Rat
71078Lhx3LIM homeobox 3336538613662509Rat
71096Dnm1dynamin 131133808111382043Rat
620004Angptl2angiopoietin-like 231226282212292665Rat
70920Col5a1collagen type V alpha 1 chain364301806581010Rat
3785Stxbp1syntaxin binding protein 131182377911885479Rat
3229Odf2outer dense fiber of sperm tails 2384497338495764Rat
69408Lcn2lipocalin 231141418911417534Rat
708460Ppp6cprotein phosphatase 6, catalytic subunit32347812323510959Rat
620478Inpp5einositol polyphosphate-5-phosphatase E338433073856154Rat
629476Ggta1glycoprotein, alpha-galactosyltransferase 131461409914701185Rat
620320Olfm1olfactomedin 1367610316798739Rat
620124Tsc1TSC complex subunit 1372199557269063Rat
2489Dbhdopamine beta-hydroxylase357092365731895Rat
621350Fnbp1formin binding protein 1398656579936333Rat
621714Sptan1spectrin, alpha, non-erythrocytic 1385344378599259Rat
620384Vegp2von Ebners gland protein 2342172604221330Rat
620078Pomt1protein-O-mannosyltransferase 131125342411271873Rat
708507Egfl7EGF-like-domain, multiple 7340347594044280Rat
727779Nek6NIMA-related kinase 632281192722888598Rat
621629Olr414olfactory receptor 41432088232420883259Rat
621106Kcnt1potassium sodium-activated channel subfamily T member 1333106413366558Rat
619793Rapgef1Rap guanine nucleotide exchange factor 1381895948307077Rat
620468Igkv28immunoglobulin kappa chain variable 28 (V28)31786679417867361Rat
620282Golga2golgin A231131732811337569Rat
62076Ptgesprostaglandin E synthase397274089738752Rat
619872Lcn1lipocalin 1342331114236960Rat
3533Ralgdsral guanine nucleotide dissociation stimulator370901347130548Rat
68350Nr5a1nuclear receptor subfamily 5, group A, member 132299890023020441Rat
621125Sardhsarcosine dehydrogenase357372035802153Rat
621135Pdclphosducin-like32160234921609821Rat
2331Celcarboxyl ester lipase371340217141522Rat
620648Barhl1BarH-like homeobox 1374912347498555Rat
628863Tor1atorsin family 1, member A398003229807318Rat
621222Fcnbficolin B366178166626193Rat
628666Slc25a25solute carrier family 25 member 2531144239611476186Rat
620673Strbpspermatid perinuclear RNA binding protein32181768021956988Rat
620527Surf1SURF1, cytochrome c oxidase assembly factor354617175464560Rat
1303196St6galnac6ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 631162005011641460Rat
1305173Gtf3c5general transcription factor IIIC subunit 5371443547164678Rat
1305178RGD1305178similar to Hypothetical protein MGC11690398139149822222Rat
1304833Rc3h2ring finger and CCCH-type domains 232162197621676789Rat
620843Lmx1bLIM homeobox transcription factor 1 beta31260874812686937Rat
727897Pmpcapeptidase, mitochondrial processing subunit alpha338342623842061Rat
620881Rab14RAB14, member RAS oncogene family31437327014395357Rat
2514Dpm2dolichyl-phosphate mannosyltransferase subunit 2, regulatory31158794111590528Rat
1303005St6galnac4ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 431160710311619595Rat
1303007Rpl35ribosomal protein L3532329481323297774Rat
3187Notch1notch receptor 1339055623951015Rat
2237C5complement C531420646614229141Rat
2237C5complement C531404999314113931Rat
2843Hspa5heat shock protein family A (Hsp70) member 531383830413842763Rat
2076Ak1adenylate kinase 131165214311659135Rat
621093Psmb7proteasome 20S subunit beta 732289007222951718Rat
620611Slc2a8solute carrier family 2 member 831202022712029920Rat
1304638Coq4coenzyme Q4383493868357719Rat
628682Gpsm1G-protein signaling modulator 1337673943794360Rat
628609Abo3histo-blood group ABO system transferase 3351098805127376Rat
1306007Zbtb6zinc finger and BTB domain containing 632167918121697532Rat
1306022Nup188nucleoporin 188388522718908608Rat
1305621Usp20ubiquitin specific peptidase 20398225869856057Rat
1305109Stomstomatin31451557614538199Rat
1305821Plpp7phospholipid phosphatase 7 (inactive)31111455111130427Rat
621686Dab2ipDAB2 interacting protein31488926315060286Rat
1307329Gle1GLE1 RNA export mediator384980988530218Rat
1307004Fubp3far upstream element binding protein 331022071210269757Rat
1306283Ndufa8NADH:ubiquinone oxidoreductase subunit A831536288815379386Rat
1306285Vav2vav guanine nucleotide exchange factor 2358115045976311Rat
1307586Rpl7aribosomal protein L7a354589855461627Rat
1307411Rbm18RNA binding motif protein 1831544404315463881Rat
1305081Aif1lallograft inflammatory factor 1-like392379449262628Rat
1307447Dolpp1dolichyldiphosphatase 1389571038966618Rat
1310287Zbtb43zinc finger and BTB domain containing 4331248977412509372Rat
1308561Zbtb26zinc finger and BTB domain containing 2632168533921697945Rat
735020Qrfppyroglutamylated RFamide peptide394023979404354Rat
1304778Cercamcerebral endothelial cell adhesion molecule384211168444743Rat
1307355Stkld1serine/threonine kinase-like domain containing 1354815245500568Rat
1307018Niban2niban apoptosis regulator 231192171511971327Rat
1306220Rexo4REX4 homolog, 3'-5' exonuclease355005785510908Rat
1307382Surf6surfeit 6354414045452156Rat
1307383Slc27a4solute carrier family 27 member 4383639378376858Rat
1310612RabepkRab9 effector protein with kelch motifs31384535213865843Rat
1305930Entr1endosome associated trafficking regulator 1338274983834219Rat
1305336Ciz1CDKN1A interacting zinc finger protein 131139204611409218Rat
1304895Ddx31DEAD-box helicase 31374228717488299Rat
1306582Ntmt1N-terminal Xaa-Pro-Lys N-methyltransferase 1396427489659633Rat
1305897Mrrfmitochondrial ribosome recycling factor31546388415520621Rat
1307739Morn5MORN repeat containing 531537910915407252Rat
1307198Pbx3PBX homeobox 331324103113436084Rat
1305159Wdr5WD repeat domain 5360618926080724Rat
1306593Zdhhc12zinc finger DHHC-type palmitoyltransferase 12386563978659102Rat
1306599Urm1ubiquitin related modifier 1383890248405868Rat
1305882Gpr107G protein-coupled receptor 10731063287610694654Rat
1305886Sh3glb2SH3 domain-containing GRB2-like endophilin B2389092318924066Rat
1306573Exosc2exosome component 231015173410161997Rat
2163Ass1argininosuccinate synthase 131032741110375847Rat
1304691Rabgap1RAB GTPase activating protein 132169803221815383Rat
1305363Mapkap1MAPK associated protein 131348495213701772Rat
1306074Mymkmyomaker, myoblast fusion factor356082435617689Rat
1305921Pkn3protein kinase N3386280338656464Rat
1311501Cacfd1calcium channel flower domain containing 1355558075571205Rat
1311084RGD1311084similar to 1700113K14Rik protein396298239636137Rat
1308635DnlzDNL-type zinc finger337964803798467Rat
1333496Olr418olfactory receptor 41832098164620982578Rat
1307287Sh2d3cSH2 domain containing 3C31175642711793547Rat
1333914Olr410olfactory receptor 41031631842916319367Rat
1333103Olr417olfactory receptor 41732096575120966704Rat
1333332Olr429olfactory receptor 42932129202621292955Rat
1333333Olr425olfactory receptor 42532114794421148897Rat
1309317Slc2a6solute carrier family 2 member 6355677295575144Rat
1333209Olr415olfactory receptor 41532089318720894134Rat
1333442Olr396olfactory receptor 39631574969115750629Rat
1333868Olr412-psolfactory receptor pseudogene 41232086706520867828Rat
1333900Olr402olfactory receptor 40231600120716002145Rat
1333139Olr434olfactory receptor 43432136328521364268Rat
1333082Olr413olfactory receptor 41332087870120879639Rat
1333084Olr400olfactory receptor 40031589519115896120Rat
1332629Olr407olfactory receptor 40731624157316242511Rat
1332682Olr411olfactory receptor 41132085276720853708Rat
1332944Olr428olfactory receptor 42832127621321277148Rat
1359542Ubac1UBA domain containing 1334533963476242Rat
1310460Fbxw2F-box and WD repeat domain containing 231387151313897033Rat
1310821Dolkdolichol kinase388501548852192Rat
1308313Uck1uridine-cytidine kinase 131127187411277757Rat
1308354Ptpaprotein phosphatase 2 phosphatase activator389821229012585Rat
1333097Olr398olfactory receptor 39831582322015824149Rat
1332825Olr427olfactory receptor 42732120860021209523Rat
1310836Ptges2prostaglandin E synthase 231142419511431379Rat
1311305Golga1golgin A132330931823353439Rat
1311471Prrx2paired related homeobox 2396818719718051Rat
727909Spaca9sperm acrosome associated 9372698517279253Rat
1310763Endogendonuclease G387418338744414Rat
1359394Trub2TruB pseudouridine synthase family member 2383384798348746Rat
1309048Snapc4small nuclear RNA activating complex, polypeptide 4338085963827425Rat
1332758Olr422olfactory receptor 42232106011721061070Rat
1311651Olfml2aolfactomedin-like 2A32322346823259318Rat
1308431Tor1btorsin family 1, member B397928189798924Rat
1333411Olr421olfactory receptor 42132102695521027947Rat
1333418Olr399olfactory receptor 39931585628915857212Rat
1306912Kyat1kynurenine aminotransferase 1387522898785617Rat
1308434Psmd5proteasome 26S subunit, non-ATPase 531391619913937031Rat
1332877Olr393-psolfactory receptor pseudogene 39331561785515618718Rat
1306174Lhx6LIM homeobox 631540934915433504Rat
1308600Dipk1bdivergent protein kinase domain 1B340837974091550Rat
1304977Nup214nucleoporin 21431099358411070638Rat
1304977Nup214nucleoporin 214392278699236878Rat
1309368Crb2crumbs cell polarity complex component 232203781222061247Rat
1306233RGD1306233similar to hypothetical protein MGC29761370476037051953Rat
1309292Nacc2NACC family member 2335080843574787Rat
1309399Lamc3laminin subunit gamma 3392654079327107Rat
1305459Adamtsl2ADAMTS-like 2356244735654890Rat
1310887Miga2mitoguardin 2389284848951189Rat
1305317Cntrlcentriolin31429944114371681Rat
708370Card9caspase recruitment domain family, member 9337983463806841Rat
1308925Brd3bromodomain containing 3359952046054467Rat
1308742RGD1308742similar to Complement C5 precursor31427355214291401Rat
1309097Fibcd1fibrinogen C domain containing 1393658669399578Rat
1307089Ntng2netrin G2377425117800834Rat
1310165Ptrh1peptidyl-tRNA hydrolase 1 homolog31181130311817007Rat
1308867Arpc5lactin related protein 2/3 complex, subunit 5-like32330145523309077Rat
1309229Agpat21-acylglycerol-3-phosphate O-acyltransferase 2340447414055384Rat
1310284Zer1zyg-11 related, cell cycle regulator386625798690486Rat
1308445Asb6ankyrin repeat and SOCS box-containing 6396597079664445Rat
1311727Gfi1bgrowth factor independent 1B transcriptional repressor371907217203444Rat
1307927Dennd1aDENN domain containing 1A32206112022501502Rat
1307479Gapvd1GTPase activating protein and VPS9 domains 131375157213825573Rat
1310377Phyhd1phytanoyl-CoA dioxygenase domain containing 1388280528846126Rat
1310390Phf19PHD finger protein 1931395713613978283Rat
1306160Lrp1bLDL receptor related protein 1B32520119427348126Rat
1303144Ak8adenylate kinase 8372794297394509Rat
1564740Nr6a1nuclear receptor subfamily 6, group A, member 132302922223218050Rat
1565512Ccdc187coiled-coil domain containing 187337246563747440Rat
1561980Surf4surfeit 4354682845481447Rat
1561547LOC500180similar to IG KAPPA CHAIN V-V REGION K2 PRECURSOR31929652819297065Rat
1334355Olr431-psolfactory receptor pseudogene 43132131753721317747Rat
1560029LOC502618ABO-family member 631459298514614011Rat
1563231RGD1563231similar to immunoglobulin kappa-chain VK-131699908916999747Rat
1564019Garnl3GTPase activating Rap/RanGAP domain-like 331203413112176591Rat
1565673Ttf1transcription termination factor 1376356307660153Rat
1564440Sohlh1spermatogenesis and oogenesis specific basic helix-loop-helix 1332907663295226Rat
1561058Ier5limmediate early response 5-like390363519037942Rat
1559916RGD1559916similar to immunoglobulin kappa-chain31641306316413774Rat
1334157Olr397olfactory receptor 39731578799415791206Rat
1564854RGD1564854similar to divalent cation tolerant protein CUTA31393670913955651Rat
1334305Olr416olfactory receptor 41632091366820914603Rat
1333467Olr401olfactory receptor 40131593051815931456Rat
1359465Dync2i2dynein 2 intermediate chain 2385992518615329Rat
1564114Cfap77cilia and flagella associated protein 77375085007632311Rat
1311152Abo2histo-blood group ABO system transferase 2353864345402666Rat
1309709Mvb12bmultivesicular body subunit 12B31278019612944542Rat
1311690Lrrc8aleucine rich repeat containing 8 VRAC subunit A388015448829506Rat
1333536Olr408olfactory receptor 40831628705616287994Rat
1334184Olr405-psolfactory receptor pseudogene 40531616342416164344Rat
1311594Adamts13ADAM metallopeptidase with thrombospondin type 1 motif, 13355199215558390Rat
1333882Olr409olfactory receptor 40931631157816312519Rat
1303031Cratcarnitine O-acetyltransferase389679848981959Rat
1309116Mrps2mitochondrial ribosomal protein S2370516957056726Rat
1334437Olr419olfactory receptor 41932099320520994152Rat
1559966Swi5SWI5 homologous recombination repair protein31130798111317049Rat
1560382RGD1560382similar to [Human Ig rearranged gamma chain mRNA, V_J_C region and complete cds.], gene product31661010116610935Rat
1333656Olr420olfactory receptor 42032101626621017192Rat
1334061Olr394-psolfactory receptor pseudogene 39431564392915644863Rat
1332916Olr395olfactory receptor 39531568899215689930Rat
1560002Cfap157cilia and flagella associated protein 15731181357511820549Rat
1334217Olr404olfactory receptor 40431611722816118166Rat
1303089Gsngelsolin31445610614508922Rat
1564893Med22mediator complex subunit 22354536785458760Rat
1332955Olr403olfactory receptor 40331603924916040172Rat
1333812Olr406olfactory receptor 40631618332216184257Rat
1333742Olr424olfactory receptor 42432113050021131492Rat
1334389Olr423olfactory receptor 42332111485621115842Rat
1586383Gpr21G protein-coupled receptor 2132176437721767300Rat
1564343RGD1564343similar to 40S ribosomal protein S1631487302214873533Rat
1583297LOC685000similar to Vomeronasal secretory protein 2 precursor (Vomeronasal secretory protein II) (VNSP II) (Lipocalin-4)343508864354261Rat
1566351Fam78afamily with sequence similarity 78, member A31108601611105151Rat
1586003LOC502825hypothetical LOC50282531713926217140655Rat
1586004LOC502823similar to fibrillarin31748061217485807Rat
1584720Qsox2quiescin sulfhydryl oxidase 2336623243691972Rat
1587247LOC500184similar to fibrillarin31793813917938911Rat
1564492RGD1564492similar to hypothetical protein, 2-6369795256980080Rat
1586401Prdm12PR/SET domain 1231018110410199185Rat
1565022Camsap1calmodulin regulated spectrin-associated protein 1333739713434027Rat
1583505LOC681186hypothetical protein LOC681186340956984104349Rat
1564696RGD1564696similar to immunoglobulin light chain variable region31700909717009842Rat
1564379Tmem250transmembrane protein 250335907833594475Rat
1564993Med27mediator complex subunit 27378847938059003Rat
1565817Surf2surfeit 2354645935468426Rat
1565575Setxsenataxin376804307731815Rat
1561137RGD1561137similar to 40S ribosomal protein S1632198388021984383Rat
1564403Lrsam1leucine rich repeat and sterile alpha motif containing 131197040112009463Rat
1359638Cdk9cyclin-dependent kinase 931174226911747117Rat
1584015LOC690155similar to phosducin-like32137368221382128Rat
1584969Abl1ABL proto-oncogene 1, non-receptor tyrosine kinase31004182010145076Rat
1359111Tor2atorsin family 2, member A31179473111800261Rat
1584028LOC690140similar to olfactory receptor Olr137432131311621314069Rat
1561113RGD1561113similar to Hypothetical UPF0184 protein C9orf16 homolog31140807611410907Rat
1561736RGD1561736similar to ribosomal protein L1032514852725149104Rat
1562587Wdr38WD repeat domain 3832329171223294818Rat
1565200Ggta1l1glycoprotein, alpha-galactosyltransferase 1-like 131455591614573016Rat
1582840LOC690273hypothetical protein LOC69027332158122121582267Rat
1565106Rpl12ribosomal protein L1231200957812011952Rat
1584372LOC684988similar to ribosomal protein S13343412294341782Rat
1563514Spout1SPOUT domain containing methyltransferase 1387438908751634Rat
1588380LOC502622similar to transcription elongation factor B (SIII), polypeptide 232152105321521582Rat
1588381LOC502621similar to transcription elongation factor B (SIII), polypeptide 232151353521513980Rat
1588382LOC502620similar to transcription elongation factor B (SIII), polypeptide 232150916221510009Rat
1588383LOC502619similar to transcription elongation factor B (SIII), polypeptide 232150511121505570Rat
1592210LOC690754similar to fibrillarin31760471317605862Rat
1587713Fpgsfolylpolyglutamate synthase31171766711729694Rat
1589739LOC362126similar to Voltage-dependent anion-selective channel protein 2 (VDAC-2) (mVDAC2) (mVDAC6) (Outer mitochondrial membrane protein porin 2)32376254623769677Rat
1588379LOC502623similar to Ribosome biogenesis regulatory protein homolog32144272021450359Rat
1588449LOC498750similar to cDNA sequence BC00553731797971417980319Rat
1561766RGD1561766similar to basic transcription factor 331559751115598223Rat
1590958LOC690876similar to transcription elongation factor B (SIII), polypeptide 232151705421517951Rat
1589699Klf5-ps1Kruppel-like factor 5, pseudogene 131577180215774679Rat
1585467Hmcn2hemicentin 231038487310536529Rat
1586005LOC502801hypothetical LOC50280132043607720438415Rat
1586630LOC686066similar to 60S ribosomal protein L38389552898955655Rat
1589697LOC366036hypothetical LOC36603632358240523583100Rat
1589698LOC366027similar to NME1-NME2 protein32138253721384388Rat
1597527Pip5kl1phosphatidylinositol-4-phosphate 5-kinase-like 131159215611597513Rat
1597535Fam102afamily with sequence similarity 102, member A31155408411586315Rat
1593188Engendoglin31167953011717486Rat
1596103LOC690401hypothetical protein LOC69040132296223122964205Rat
1592609Gtf3c4general transcription factor IIIC subunit 4374048577422779Rat
1597179LOC296593similar to Aspartate aminotransferase, mitochondrial precursor (Transaminase A) (Glutamate oxaloacetate transaminase 2)350445435045872Rat
1594720Scaisuppressor of cancer cell invasion32335758623474218Rat
1591934Klf5-ps2Kruppel-like factor 5, pseudogene 232156450921565435Rat
1591937Tbc1d13TBC1 domain family, member 13387018498718400Rat
1591938Gbgt1globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group)370765827079652Rat
1592227LOC690737similar to Eukaryotic translation initiation factor 5 (eIF-5)31765792517659531Rat
1595411LOC681413similar to stem-loop binding protein353618665362738Rat
1597546Naif1nuclear apoptosis inducing factor 131147633011482629Rat
1588742Ttll11tubulin tyrosine ligase like1131508424415312312Rat
1596290Traf1TNF receptor-associated factor 131400334014022955Rat
1597311LOC690381similar to glycosyltransferase-like domain containing 1 isoform b31649816616499499Rat
1596705LOC681385similar to Vomeronasal secretory protein 2 precursor (Vomeronasal secretory protein II) (VNSP II) (Lipocalin-4)352779655281348Rat
1595050Ppp1r26protein phosphatase 1, regulatory subunit 26370321187040615Rat
1596715Lcn4lipocalin 4351676855170554Rat
1595906Prrc2bproline-rich coiled-coil 2B31116568711252401Rat
1597714Fam163bfamily with sequence similarity 163, member B356564005693273Rat
1596130Zbtb34zinc finger and BTB domain containing 3431245270512468487Rat
2307241AboABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase343746794394374Rat
2318734LOC100362149ribosomal protein S20-like32296422222964734Rat
2318882LOC100365500mCG142154-like31757739417579310Rat
2319500Ralgps1Ral GEF with PH domain and SH3 binding motif 131218272212415081Rat
2318320LOC10036236640S ribosomal protein S17-like32460059324601074Rat
2318922Ttc16tetratricopeptide repeat domain 1631179978811811600Rat
2319569LOC100361705rCG64259-like31932029119321014Rat
2319042LOC100365438mCG141619-like31751775517518862Rat
2320327LOC100361338hypothetical LOC10036133831909953219100167Rat
2321310LOC100360848rCG64259-like31657159016572209Rat
2322107LOC100360449ribosomal protein L9-like342822064282911Rat
2322732LOC100360117ribosomal protein L8-like333895823390465Rat
2322350Sec16aSEC16 homolog A, endoplasmic reticulum export factor338562183890785Rat
2320855LOC100364505hypothetical LOC10036450532032443120330672Rat
2320908LOC100361052rCG64257-like31649564116496412Rat
2320951LOC100361009rCG64257-like31653675316537430Rat
2320952LOC100361008Cytochrome c oxidase subunit 5A, mitochondrial-like390958959096496Rat
2323145LOC100363399hypothetical LOC10036339932417253924173279Rat
2323201LOC100363342hypothetical LOC10036334232406603124067420Rat
2321092LOC100360968mCG142527-like31955277319553437Rat
2323358LOC100363282Igk protein-like32030375020304293Rat
2324400LOC100366057rCG53375-like31856215018562681Rat
2324539LOC100362515hypothetical LOC10036251531852570818526227Rat
4888575Mir2964microRNA 2964384074278407526Rat
2323876LOC100359417ubiquinol-cytochrome c reductase subunit32488249524907663Rat
2325334Mir219-2microRNA 219-2384074308407525Rat
2325335Mir181a2microRNA 181a-232315035223150468Rat
2325386Mir126bmicroRNA 126b340424884042560Rat
2325454Mir181b2microRNA 181b-232315145523151542Rat
2324065LOC100362793ring finger protein 138-like341341104134770Rat
4888595Mir126amicroRNA 126a340424644042581Rat
6489735LOC100911937vomeronasal type-2 receptor 26-like31723717617241266Rat
6490002LOC100911867patatin-like phospholipase domain-containing protein 7-like347309774771891Rat
6488496LOC100912221target of rapamycin complex 2 subunit MAPKAP1-like31417269414203317Rat
6489329LOC100912008uncharacterized LOC100912008348697904872633Rat
6489529LOC100912042surfeit locus protein 2-like348726574876499Rat
6489628LOC100911917mediator of RNA polymerase II transcription subunit 22-like348617534867005Rat
6485978LOC100912604spermidine synthase-like31458881814591980Rat
6492253LOC100911507von Ebner gland protein 2-like341374564140240Rat
6492447LOC100911541E3 ubiquitin-protein ligase RNF138-like342139144214574Rat
6484475LOC690819Ig kappa chain V19-17-like31709886617099512Rat
6490777LOC100911738heterogeneous nuclear ribonucleoprotein K-like345871094587922Rat
6490845LOC10091175340S ribosomal protein S7-like31351422113514935Rat
6493667LOC100911251disks large homolog 5-like32155439721564309Rat
6493893LOC100911266uncharacterized LOC100911266340920164094902Rat
6491244LOC100911704histo-blood group ABO system transferase 2-like343746684409316Rat
6492996LOC100911432uncharacterized LOC100911432359918405993910Rat
6502032LOC100909750tyrosine-protein kinase ABL1-like394091999448254Rat
6501108LOC100909960uncharacterized LOC10090996031089385610934525Rat
6501441LOC100909783orexigenic neuropeptide QRFP-like394023979404338Rat
7518353LOC102554659laminin subunit gamma-3-like399377289959739Rat
7489046Mir7578microRNA 7578360001336000214Rat
7524910LOC102554559uncharacterized LOC102554559394933239498259Rat
7508238LOC102554154uncharacterized LOC102554154393329529336234Rat
7511011LOC102555629uncharacterized LOC10255562931107601311082555Rat
7519388LOC102548933uncharacterized LOC10254893331457314914575432Rat
7519941LOC102549213uncharacterized LOC10254921331483112814837521Rat
7539922LOC102551194uncharacterized LOC10255119432778961727972025Rat
7662165LOC102557127histone H3.3-like32160581721606872Rat
7620876LOC102552327PIH1 domain-containing protein 1-like334420173448977Rat
7650400LOC102549127uncharacterized LOC102549127368058316810496Rat
7621681LOC102554760uncharacterized LOC102554760399655819968863Rat
7623233LOC102554311uncharacterized LOC10255431132313356523148304Rat
7576402LOC102554501uncharacterized LOC102554501394975379512236Rat
7638971LOC102557449uncharacterized LOC10255744931211274812130574Rat
7654995LOC102556236nucleoside diphosphate kinase B-like32160967421613174Rat
7626419LOC102554040uncharacterized LOC10255404031442032514456057Rat
7629611LOC102550392uncharacterized LOC102550392391087999115734Rat
7570096LOC102553670surfeit locus protein 4-like348763574884915Rat
7617739LOC102554283A disintegrin and metalloproteinase with thrombospondin motifs 13-like348938544897118Rat
7617994LOC102550843heterogeneous nuclear ribonucleoprotein A3-like387202098724324Rat
7596677LOC102547269ATP synthase subunit g, mitochondrial-like384473608448153Rat
7600298LOC102548484uncharacterized LOC102548484355526585561753Rat
7578982LOC102550017uncharacterized LOC10255001731252395212526848Rat
7579002LOC102547011uncharacterized LOC102547011383225178326640Rat
7560948LOC102551296pre-B-cell leukemia transcription factor 3-like31416486214169438Rat
7547503LOC102547882uncharacterized LOC102547882342850374289017Rat
7582623Prrt1bproline rich transmembrane protein 1B383123858317837Rat
7586711LOC102553311voltage-dependent N-type calcium channel subunit alpha-1B-like346132044617428Rat
7586747LOC10255139840S ribosomal protein S7-like31417203514172631Rat
7692108LOC102550543uncharacterized LOC102550543334340863439894Rat
7704837LOC102547612uncharacterized LOC102547612341062354110370Rat
7707194LOC102547684uncharacterized LOC10254768432473370324735058Rat
7707315LOC102546322COPII coat assembly protein sec16-like32335355123359951Rat
7684955LOC102554500ral guanine nucleotide dissociation stimulator-like349878204989208Rat
7684996LOC102554503uncharacterized LOC10255450332302506823031446Rat
7687800LOC102551549uncharacterized LOC10255154932143168921442721Rat
7725305LOC102552073uncharacterized LOC102552073341835104186491Rat
7732175LOC102551298MLV-related proviral Env polyprotein-like32797023327972000Rat
7741314LOC102546443NEDD4-binding protein 1-like32369846623699382Rat
7703143LOC102550940uncharacterized LOC10255094031399117213993028Rat
7679486LOC102548384alpha-endosulfine-like354322525433366Rat
7749459LOC102554600uncharacterized LOC10255460032325764523272058Rat
7711368LOC102548763uncharacterized LOC10254876331441802314420298Rat
7681886LOC102554998uncharacterized LOC102554998361885626189523Rat
7682627LOC102548789uncharacterized LOC102548789357650445768313Rat
9089865LOC103691777uncharacterized LOC10369177732406094224065033Rat
9093487LOC10369180540S ribosomal protein S14 pseudogene32427669524277212Rat
9094692LOC103691771uncharacterized LOC10369177131425660814258163Rat
9144784LOC103691756allergen Fel d 4-like346798504680268Rat
9151592LOC103691776uncharacterized LOC10369177632224572322248080Rat
9191018LOC103691766uncharacterized LOC10369176631129402011296785Rat
9122399LOC103691764microtubule-associated proteins 1A/1B light chain 3B pseudogene31084524610891850Rat
9085992LOC103691755activated RNA polymerase II transcriptional coactivator p15 pseudogene342317374232240Rat
9224209LOC103691806uncharacterized LOC10369180632649201126496320Rat
9357370LOC103691795mitogen-activated protein kinase 7-like31382454113825332Rat
9321685LOC103691763uncharacterized LOC103691763370255957033085Rat
9242896LOC103691753uncharacterized LOC103691753336878283691604Rat
9387198LOC103691761ATP synthase F(0) complex subunit C2, mitochondrial pseudogene31059417710594825Rat
9360889LOC103691769uncharacterized LOC10369176931352772013528048Rat
9252629LOC103691799Ig kappa chain V-III region MOPC 63-like31721312017217896Rat
9254771LOC103691759uncharacterized LOC103691759386899198701719Rat
9255024LOC103691770uncharacterized LOC10369177031413533814136083Rat
9255683LOC103691768uncharacterized LOC10369176831338788813393011Rat
9339909LOC103691762microtubule-associated proteins 1A/1B light chain 3B pseudogene368866136896088Rat
9363334LOC103690196transcription factor Sp3 pseudogene32417153824172373Rat
9258213LOC103691765uncharacterized LOC10369176531125065111254809Rat
9300418LOC103691752uncharacterized LOC103691752335842133588141Rat
9300457LOC10369515260S ribosomal protein L39 pseudogene31271596612716198Rat
9301596Fibcd1l1fibrinogen C domain containing 1-like 13999805710032206Rat
9343709LOC103691775uncharacterized LOC10369177532176922821775540Rat
9343716LOC103691804Ig kappa chain V-V region K2-like32035321220353714Rat
9343998LOC103691754uncharacterized LOC103691754339553713964685Rat
9263023LOC103691774uncharacterized LOC10369177432055265620640189Rat
9307218LOC103691772Ig kappa chain V-V region MOPC 21-like31708725717088015Rat
9366210LOC103691760vegetative cell wall protein gp1-like31044977110450823Rat
9462702LOC103691797Ig kappa chain V-II region TEW-like31645454816455380Rat
9424697B3galt9beta-1,3-galactosyltransferase 931390417113906523Rat
9467549LOC103691767uncharacterized LOC10369176731173164611739127Rat
9399895LOC103695151uncharacterized LOC10369515131047236610474504Rat
9408781LOC103691794uncharacterized LOC10369179431110209211104715Rat
9451632LOC103691758uncharacterized LOC103691758383763608377694Rat
9459683LOC103691757uncharacterized LOC103691757358022465803013Rat
11051988LOC502818Ig kappa chain V-I region HK102-like31844246318444505Rat
11473570LOC108350366uncharacterized LOC10835036632271607722783722Rat
11458713LOC103691773Ig kappa chain V-V region K2-like31838260718383187Rat
11459298LOC108350344uncharacterized LOC108350344369237716950556Rat
11459490LOC108350349uncharacterized LOC10835034931020023710202187Rat
11360258LOC108350354uncharacterized LOC10835035431388253313884996Rat
11372168LOC108348033WD repeat-containing protein 5-like349373794949887Rat
11051991LOC102551297Ig kappa chain V-II region 26-10-like31996119319962116Rat
11051998LOC102554848Ig kappa chain V-V region L7-like31813955318140128Rat
11051987LOC102555123Ig kappa chain V-V region K2-like31843533718436816Rat
11051989LOC102549452Ig kappa chain V-I region HK102-like31941557119421503Rat
11051990LOC102556862Ig kappa chain V-III region MOPC 63-like31824422818244829Rat
11052048LOC102552747Ig kappa chain V-V region K2-like32070748320709432Rat
11052049LOC690813Ig kappa chain V-IV region-like31710759017110056Rat
11431175LOC108350363Ig kappa chain V-V region K2-like32043549020436251Rat
11442301NEWGENE_735020pyroglutamylated RFamide peptide31003502410036981Rat
11442316LOC108350579actin, cytoplasmic 2-like32590819325910044Rat
11394962LOC108348147formin-binding protein 1-like31070536610791182Rat
11405618LOC108350340uncharacterized LOC108350340337984813807934Rat
11412302LOC108350358uncharacterized LOC10835035831534589015349563Rat
11415833LOC10835035540S ribosomal protein S29 pseudogene31452256214524447Rat
11420073LOC108350364uncharacterized LOC10835036432158293021588062Rat
11422106LOC108350591glyceraldehyde-3-phosphate dehydrogenase pseudogene387928698794412Rat
11425388LOC108350365uncharacterized LOC10835036532168415121695216Rat
11425803LOC108350352uncharacterized LOC10835035231313544413168658Rat
11426622LOC108350362uncharacterized LOC10835036231929277119308901Rat
11384512LOC108350359uncharacterized LOC10835035931551987415522928Rat
11375987LOC108350353uncharacterized LOC10835035331348273013484818Rat
11376705LOC108350347uncharacterized LOC108350347384950488498030Rat
11400024LOC108350342uncharacterized LOC108350342348983534900971Rat
11377311LOC108350345uncharacterized LOC108350345376600637676313Rat
11410406LOC108350343uncharacterized LOC108350343368707476882922Rat
11410852LOC108350350uncharacterized LOC10835035031054302910550067Rat
11390233LOC108350357uncharacterized LOC10835035731519737515199549Rat
11402264LOC108350341uncharacterized LOC108350341340249904027645Rat
11405005LOC108350346uncharacterized LOC108350346378352347841766Rat
11383082LOC102556911Ig kappa chain V-V region L7-like31858030218580858Rat
11480053LOC108350348uncharacterized LOC108350348396039939605980Rat
11496785LOC10835055160S ribosomal protein L12 pseudogene32483716424837883Rat
11497379LOC103691800Ig kappa chain V-IV region-like31734548717346198Rat
11512228LOC108350356uncharacterized LOC10835035631491344214921584Rat
11499875LOC108350550adenylate kinase isoenzyme 1-like31164911611652091Rat
11482890LOC108350360rRNA 2'-O-methyltransferase fibrillarin pseudogene31760456117607740Rat
11518617LOC108350590ATP synthase subunit g, mitochondrial pseudogene384463188448182Rat
11490445LOC108350351uncharacterized LOC10835035131303114713048043Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10260D3Rat5216631409041114090566Ratregion
10344D3Wox12125371352027135317Ratregion
34186D3Mgh9125332859293286073Ratregion
34252D3Mgh1914231520312215203253Ratregion
34347D3Mgh16119360007486000866Ratregion
34457D3Mgh17140357758565776005Ratregion
36167D3Rat5012232122380321223924Ratregion
36195D3Rat5115032195539521955556Ratregion
36354D3Mit2222731513801215138221Ratregion
37010D3Rat4916032813672828136884Ratregion
36657D3Rat5816431011931810119462Ratregion
35054D3Rat5513831018749610187633Ratregion
35609D3Rat5315831312691413127093Ratregion
35617D3Rat5416831063961610639688Ratregion
35617D3Rat5416831063952810639688Ratregion
39630D3Rat195225339134903913724Ratregion
38448D3Rat72136340789934079114Ratregion
38506D3Rat9620631025290910253100Ratregion
38864D3Rat69224335118333512064Ratregion
39072D3Rat12420431106800211068201Ratregion
39214D3Rat13120232192769721927870Ratregion
39220D3Rat208128333175543317681Ratregion
41924D3Rat57169333451143345312Ratregion
42136D3Arb3290371402387140570Ratregion
41476D3Rat193147397902109790366Ratregion
42634D3Rat282244334519443452181Ratregion
42635D3Rat281148339527483952901Ratregion
42636D3Rat280124372670917267196Ratregion
42638D3Rat23223731059630410596526Ratregion
42639D3Rat231224397082139708423Ratregion
42640D3Rat22921331604020816040435Ratregion
42641D3Rat27821031506533915065554Ratregion
42642D3Rat27617032339887723399020Ratregion
40854D3Rat19223531351825613518613Ratregion
40912D3Rat19124932183321221833449Ratregion
40968D3Rat19419931059632210596510Ratregion
41720D3Rat23020031554767315547864Ratregion
43611D3Got1121531262220312622417Ratregion
43613D3Got225631169754411698063Ratregion
43613D3Got225631169754411697799Ratregion
43614D3Got5250391057079105958Ratregion
43616D3Got913231270826112708392Ratregion
43618D3Got1012131316542313165540Ratregion
43620D3Got1720432264594422646147Ratregion
43622D3Got1424931523591915236164Ratregion
43623D3Got1511931532250115322619Ratregion
43624D3Got1622431564064715640870Ratregion
43625D3Got713531538450215384633Ratregion
43626D3Got817731513802015138196Ratregion
60385D3Got17521932477298424773202Ratregion
60388D3Got2026032410719524107454Ratregion
60395D3Got4136363893396389474Ratregion
69714D3Kyo2158392450379245181Ratregion
625799D3Got1322732167844021678663Ratregion
66449D3Mco1623632563310625633366Ratregion
66452D3Mco1819931315325713153456Ratregion
66504D3Mco30200390006619000895Ratregion
66504D3Mco30200390006619000690Ratregion
728000D3Chm4223931034188110342118Ratregion
728000D3Chm42239397473119747549Ratregion
728005D3Chm40174397392209739393Ratregion
728012D3Chm1522331315938913159611Ratregion
728017D3Chm3250353026745302923Ratregion
728023D3Chm43173397487049748876Ratregion
728027D3Chm41173397395649739736Ratregion
728028D3Chm722731335260113352827Ratregion
728038D3Chm619131315846913158659Ratregion
67265D3Arb4142362738166273957Ratregion
67266D3Arb521031248101712481226Ratregion
1627944D3Cebr696335757463575841Ratregion
1628377D4Got21513131831102918311159Ratregion
1628400D3Got275230339584633958692Ratregion
1628792D3Got283154387190858719240Ratregion
1629333D3Cebr219931047700410477202Ratregion
1629670D3Got243297339788743979170Ratregion
1629869D3Got289140363767676376906Ratregion
1638736D3Wox39148387751398775286Ratregion
1638743D3Got29427331022051110220779Ratregion
1640270D3Got20216431242354212423705Ratregion
1640611D3Cebr731405745514057665Ratregion
1635287D4Got24729331804932718049614Ratregion
1636230D3Got260279364242856424558Ratregion
1636473D3Got270193339584833958675Ratregion
1632473D3Got20312932282355522823683Ratregion
1632473D3Got20312932281775022817878Ratregion
1634001D3Got201147335344513534597Ratregion
1634531D3Got2729232158565321585744Ratregion
7192563BI27475918131164118511641365Ratregion
7206072Srm031459110314591783Ratregion
5035781PMC169877P153132417159724172127Ratregion
5035791PMC18172P1523372421807242702Ratregion
5036017PMC85812P1361339126773913037Ratregion
5036123UniSTS:141382147390959779096123Ratregion
5036213D2Wsu141e20931384248113842689Ratregion
7206256Olfm184367808796780962Ratregion
7206554UniSTS:54704592531144263511443559Ratregion
5036233RH12584824531352110813521352Ratregion
5036533Umpk9431127601911276259Ratregion
5039004RH12745721531161921111619425Ratregion
5036601AU04856217332332949223329664Ratregion
5031330PMC140651P112132301411923014239Ratregion
7205786A004H18100031021122710212226Ratregion
7205880D5S19690337023223702924Ratregion
5031476AU048197166390469229047087Ratregion
5026124RH131004186384445168444701Ratregion
5026144RH13108122031649727216497491Ratregion
5026146RH13109018031544564915445828Ratregion
5031580AU047854276363254956325770Ratregion
5031582AU047848205362060386206239Ratregion
5034291RH142088202398747959874996Ratregion
5028957RH14296811332169685821696970Ratregion
5028979RH14305228732303881623039097Ratregion
5026452RH132268212353860265386237Ratregion
5026452RH132268212343747544374965Ratregion
5029085RH14346214831422479314224940Ratregion
5029097RH14351228332330922923309511Ratregion
5026658RH133045208398603319860538Ratregion
5026714RH133252193375085527508744Ratregion
5029389RH14460615231488057114880722Ratregion
5032038AU02866419331011316610113353Ratregion
5034672BF39095521931206285412063072Ratregion
5034674BF390992180385902048590383Ratregion
5032245AI847175102358115355811636Ratregion
5032341AI85286712732330887323308999Ratregion
5027008RH134378215389663448966558Ratregion
5029701AW523421156390280559028210Ratregion
5035430BM38692815031157482911574978Ratregion
5027217AW212655134354539605454093Ratregion
5027217AW212655134348620354862168Ratregion
5027219AI3262338531182508111825165Ratregion
5029775BI27811721032067657820676787Ratregion
5032617RH13466621331596850015968712Ratregion
5034874AI01373895392383019238395Ratregion
5029909BE09768215431552554015525695Ratregion
5029963BF38826316631384382513843990Ratregion
5030267BE09974315332168542221685574Ratregion
5030273BE10514816431545272915452892Ratregion
5025184RH12733919031536297315363162Ratregion
5025224RH12749120531179327211793476Ratregion
5033329RH13843715632206096222061117Ratregion
5025340RH12794221031451494214515151Ratregion
8663472rs106373454031494918014949180Ratregion
5025538RH128711195334534713453665Ratregion
5025578RH12886521031278028012780489Ratregion
5028075U37017194358133015813494Ratregion
5028224D2Mit3729931542975015429848Ratregion
5030875BF399073161398871009887260Ratregion
5033671RH13968120431393299213933195Ratregion
5025672RH129217192357372485737439Ratregion
5025736RH129462209357372625737470Ratregion
5028362WI-20657250374669597467208Ratregion
5028392D78264121367978276797947Ratregion
5028394D4590310531182399811824102Ratregion
5031023BE12111215132680244426802594Ratregion
5025902RH130140205370478137048017Ratregion
5025928RH13023418631558213815582323Ratregion
5028531AA959768164390962289096391Ratregion
5031149BE11638815531496047014960624Ratregion
5054901RH14349014831202994912030096Ratregion
5051122RH13445218431197139211971575Ratregion
5051328AW1076499532331004123310135Ratregion
5056445RH14438210331182794111828043Ratregion
5057089AI502150183340251614025343Ratregion
5054319RH143156207370595167059722Ratregion
5057846BF386249166392306249230789Ratregion
5055661RH143929186354674585468097Ratregion
5055661RH143929186348755314876170Ratregion
5054949RH14351913531348568813485822Ratregion
5055115RH143614251338641183864368Ratregion
5058756BF38704616531015324010153404Ratregion
5058852BF387160202358987095898910Ratregion
5059610BE097431168397948639795030Ratregion
5059640BE09750219531003201110032205Ratregion
5059640BE097502195393993849399578Ratregion
5056443RH14438113132286228422863469Ratregion
5056861RH14462316331181949511819657Ratregion
5052410C8632212232183094721831068Ratregion
5058102BI277553151396594239659573Ratregion
5058116BF38661716931199621911996387Ratregion
5058134BF386669160338127013812860Ratregion
5052659RH14219117731159010011590274Ratregion
5058892BI278171114387444948744607Ratregion
5059824BE097994155357680985768252Ratregion
5055795RH144007118392649819265098Ratregion
5055813RH14401710931344786213447970Ratregion
5058278BF38693516232334497723345138Ratregion
5058316AI070911184390354309035613Ratregion
5059092BF387456182396569509657131Ratregion
5050284RH13396720631415961214159817Ratregion
5050284RH13396720631342621113426416Ratregion
5057694BF38602118431147803011478213Ratregion
5057718BF38607618031134135611341535Ratregion
5057774BF386172169382858338286001Ratregion
5050556RH13412419032181629921816488Ratregion
7193056C8632224032183085721831096Ratregion
5050176RH133905196359974695997664Ratregion
5050356RH134009201389092398909439Ratregion
5051206RH134500183385990138599195Ratregion
5051240RH134520189383153778315565Ratregion
5051326AW26036312331229334112293463Ratregion
5051330AI85251312232181787921818000Ratregion
5054251RH14311723331401702414017256Ratregion
5054513RH143268115371907947190908Ratregion
5050608RH134154211372244667224676Ratregion
5050714RH134216202385271998527400Ratregion
5054663RH14335314431163756611637709Ratregion
5051012RH134387180338430483843227Ratregion
5051066RH134420185387440238744207Ratregion
5044150RH130438183376597477659929Ratregion
5044322RH13053619731682115016821346Ratregion
5044398RH13058019331391628813916480Ratregion
5044614RH130705207372659217266127Ratregion
5041140RH12868520031125124411252267Ratregion
5043608RH13012218731127194211272128Ratregion
5045040RH13094819631020294910203144Ratregion
5045588RH131264214356545945654807Ratregion
5041384RH12882618531130800911308193Ratregion
5041404RH128837184354683805468563Ratregion
5041404RH128837184348764534876636Ratregion
5044176RH13045321631370047113700686Ratregion
5046024RH13151519431410514914105342Ratregion
5046260RH131650182333642003364381Ratregion
5041640RH12897318631203422012034405Ratregion
5041818RH12907619031063122510631414Ratregion
5041908RH129128186397274049727589Ratregion
5044838RH130832196370402907040485Ratregion
5048772RH13309622031148129511481514Ratregion
5046302RH13167420931127152411271732Ratregion
5044448RH130608184337941413794324Ratregion
5044554RH13067019732348602323486219Ratregion
5044888RH130861199354549955455193Ratregion
5044888RH130861199348630704863268Ratregion
5045410RH131162199355008415501039Ratregion
5046596RH131844183372687727268952Ratregion
5047446RH132332180397985109798689Ratregion
5045058RH130959186356564235656608Ratregion
5047582RH13241020532299904422999248Ratregion
5047606RH13242419232335429123354482Ratregion
5048834RH133133196392660749266939Ratregion
5048914RH133179181374871747487354Ratregion
5048966RH133209199385993498599547Ratregion
5048968RH13321021431038489610385109Ratregion
5048980RH133217217339054503905666Ratregion
5045798RH13138518631375284713753032Ratregion
5045818RH131396190398594339859622Ratregion
5045834RH131405216335908683591083Ratregion
5046218RH131626182383575168357697Ratregion
5047750RH13250719131428011314280303Ratregion
5047862RH132571212383765528376763Ratregion
5049130RH13330318431159016711590350Ratregion
5046722RH13191720931197564511975853Ratregion
5047904RH132596180392798139279993Ratregion
5047942RH13261821731143103711431253Ratregion
5049402RH133460199354525265452724Ratregion
5049402RH133460199348606024860800Ratregion
5049456RH133491219334602673460485Ratregion
5049462RH133495182388024138802594Ratregion
5047014RH13208518031055359910553778Ratregion
5048218RH132776194371358567136175Ratregion
5048318RH13283420031451566114515857Ratregion
5049328RH13341719631171726311717458Ratregion
5049802RH13369020131384538913845589Ratregion
5042064RH12921819032347813823478327Ratregion
5047276RH13223419031182917611829365Ratregion
5047286RH13224019231389008113890272Ratregion
5048376RH13286820431022148310221686Ratregion
5048408RH13288615031439862514398774Ratregion
5048474RH13292421831181788911818106Ratregion
5039848RH127941183390123879012569Ratregion
5040222RH12815918131004203410042214Ratregion
5040222RH128159181394094079409587Ratregion
5039598RH12779719431461429614614489Ratregion
5042040RH129204206380586128058817Ratregion
5042110RH12924621631174236011742575Ratregion
5040392RH12825718331450870014508882Ratregion
5040566RH12835718531133727511337459Ratregion
5039714RH12786521332183105021831259Ratregion
5040692RH128429216397177059717920Ratregion
5043350RH12997618332347830623478488Ratregion
5043384RH12999519131202028012020470Ratregion
5040118RH128099203365793386579540Ratregion
5042774RH12963818331248986912491162Ratregion
5042778RH129640183389083698908551Ratregion
5042848RH129681204383068158307018Ratregion
5042852RH129683200338433903843589Ratregion
5041044RH12863122031108609211086311Ratregion
5041156RH12869418531063293710633121Ratregion
5043734RH130196150340920414092190Ratregion
5043856RH130267211398139529814162Ratregion
5043912RH130300188388291118829298Ratregion
5040578RH12836420032181504321815242Ratregion
5041590RH12894418031125043311250612Ratregion
5072560RH13692020131836122518361425Ratregion
5072800RH137060181370563557056535Ratregion
5075148RH13842619032581333725813526Ratregion
5072044RH13543220131522418215224382Ratregion
5074142RH13784613131069160210691732Ratregion
5074284RH13792712731294181712941943Ratregion
5074426RH138010137333636033363739Ratregion
5076176RH13902316432169685921697022Ratregion
5076290RH139090187335084913508675Ratregion
5074562RH13808813031379968413799813Ratregion
5076684RH139318132377580417758172Ratregion
5076790RH13938015031140705211407201Ratregion
5076866RH13942416931182917611829344Ratregion
5076948RH139471187355684275568613Ratregion
5074814RH13823318832697504726975234Ratregion
5080584RH14166420431179999411800197Ratregion
5077218RH139630206365609206561290Ratregion
5076178RH13902413331558162515581757Ratregion
5075632RH13870622731178348711783713Ratregion
5075672RH13873012631127537111275496Ratregion
5079664RH14113219731113016211130358Ratregion
5077904RH140027220359955385995756Ratregion
5078406RH14032314431313102113131164Ratregion
5079740RH141176209354618125462244Ratregion
5079740RH141176209348698854870317Ratregion
5077888RH14001818932347814323478331Ratregion
5078734RH140521246337942643794509Ratregion
5080080RH14137121832288822222888439Ratregion
5080130RH141400209356084195608627Ratregion
5080142RH141408187360803116080497Ratregion
5080150RH141414206340439414044146Ratregion
5080164RH141422199340442854044483Ratregion
5078404RH14032214331508465815084802Ratregion
5078450RH14035015631530984315309998Ratregion
5079152RH14076517831124610811246285Ratregion
5070554RH134568214390959769096189Ratregion
5070592RH13459018431197097911971162Ratregion
5070774RH13469818631171774711717932Ratregion
5071122RH13489919832316376623163963Ratregion
5078650RH140467154355031395503292Ratregion
5078870RH14059918132167945821679638Ratregion
5070648RH134624180339070833907262Ratregion
5070766RH134692218386561498656366Ratregion
5071654RH135207182398532709853920Ratregion
5070976RH134815204397276419727844Ratregion
5073168RH13727921032137368021373889Ratregion
5073280RH137345190396041049604293Ratregion
5073382RH13740421331388087713881089Ratregion
5073392RH137410197386299818630177Ratregion
5072050RH135436208338086033808810Ratregion
5074364RH13797419031299529012995479Ratregion
5071264RH13498220731386967313869879Ratregion
5071498RH135117193357315455731737Ratregion
5071550RH135147180383380428338221Ratregion
5073604RH137532120383816678381786Ratregion
5072426RH136842180359980425998844Ratregion
5072444RH13685319531438116914381363Ratregion
5061790AW53353619731135700411357200Ratregion
5064994BE10886415032165948921659638Ratregion
5067062AU04798827931091648310916761Ratregion
5067062AU047988279375582177558495Ratregion
5067244AU047873285390719689072250Ratregion
8693333rs13455837356546395654639Ratregion
8693334rs106929875032510573025105730Ratregion
5067890AU047475243352294575229702Ratregion
5067980AU04742212231984502919845154Ratregion
5067980AU04742212231964030419640429Ratregion
5068146AU047320245362493486249587Ratregion
5070071RH9445619731032743510327631Ratregion
5070099RH9447215831384251313842670Ratregion
5069030AU04677124132293550722935747Ratregion
5069140AU04669919331102372411023916Ratregion
5069148AU04669215731400077614000932Ratregion
5070434AI59152911131370142613701536Ratregion
5060328AW53146920231055621410556415Ratregion
5063762AW53510715431270103412701187Ratregion
5060484BE110203156380430688043223Ratregion
5060500BE11023316231384416713844328Ratregion
5062342BF403122185397948469795030Ratregion
5063848BE120051150374912597491408Ratregion
5063956BE12031515131388531213885462Ratregion
5065662BF406161170376527727652941Ratregion
5060912AI07328517031165773211657901Ratregion
5060942BE10489915531536145415361608Ratregion
5062512BF403347204341860824186431Ratregion
5062512BF403347204341039404104289Ratregion
5064320BE11440315931557244815572606Ratregion
5060330AW53147719831293091712931114Ratregion
5061842AW53384018031470097314701152Ratregion
5065450BE11551121331105067111050883Ratregion
5062534BF4033709031001452510014614Ratregion
5062534BF40337090393818969381985Ratregion
5064178BE12072315031120973011209879Ratregion
5064570BE10812815031510172815101877Ratregion
5063038BE10703215731015175510151911Ratregion
5061432BE10515715431157867811578831Ratregion
5061540BF396659221354415285441748Ratregion
5061560BE105446190398653209865509Ratregion
5086851AI00832313231140814811408279Ratregion
5086865BQ20597417331548249315482665Ratregion
5087002AI22919719931138633811386536Ratregion
5082151BI28002815231488057114880719Ratregion
5082239BI280930169354681285468296Ratregion
5082239BI280930169348762014876369Ratregion
5086201AA85861920131459172014591920Ratregion
5087016BE107590203356466205646822Ratregion
5082439BI27475921031164112511641334Ratregion
5082597BE119814204387968288797032Ratregion
5082599BE119836155374881017488255Ratregion
5087797D2Wsu17e20531384245313842657Ratregion
5087905Hspa513331384246713842599Ratregion
5089789AU04936419131393000213930192Ratregion
5083031BF39069815131531207615312226Ratregion
5083307BF417583181383677598367939Ratregion
5088279AU048475134398776139877746Ratregion
5088317AU048497159397300109730401Ratregion
5088455AU04858015032277324822773397Ratregion
5089481AU049181265338640083864273Ratregion
5088705AU04872810832058173420581841Ratregion
5089717AU04932114731262430012624446Ratregion
5084032AI011615117386564758656591Ratregion
5081657BF414460120355632795563398Ratregion
5081667BE11791915532183684021836994Ratregion
5090291AU04966413631520313215203267Ratregion
5081981BE118976199373943057394503Ratregion
5090889AW742568246367978456798090Ratregion
5080820RH14180121131201409012014300Ratregion
5090517AU04979819831455919814559395Ratregion
5090597AU049847107397343569734462Ratregion
5088631AU0486847732477610924776185Ratregion
5081068RH141946205354415445441748Ratregion
5081104RH14196722031299362612993845Ratregion
5081186RH142014193338415313841723Ratregion
5085415AA942949141384056678405807Ratregion
5085515AA943866151386626358662785Ratregion
5085582AA94468916232191237721912538Ratregion
5089061AU04893118531438353014383714Ratregion
5082537BE119659150392513829251531Ratregion
5086046AI102331163370554657055627Ratregion
5081002RH141907193383357768335966Ratregion
5084656AA94650316331141506411415422Ratregion
5082799BF39012815931531305315313211Ratregion
5086293BQ205450207364268306427036Ratregion
5086325AA99784310431161620311616306Ratregion
5081126RH14198018732214578522145971Ratregion
5086743AA81918019631229341312293608Ratregion
5086758Stxbp124531182465411824898Ratregion
5086809BM386769220387835948783813Ratregion
5081763BE11809618231023705710237238Ratregion
5085722BQ20338018731430868114308868Ratregion
5503222UniSTS:23723717031577289515773063Ratregion
5503591UniSTS:46468411832300019223000309Ratregion
5504145UniSTS:25918016231383896913839502Ratregion
5504044px-43d224632506868225068927Ratregion
5504400PMC18813P2211374174537417663Ratregion
5504977Notch1192339083603908551Ratregion
5504930Zik112331454355914543681Ratregion
5505374Cdk9167531174230611743980Ratregion
5505598UniSTS:48513094832099320520994152Ratregion
5505694UniSTS:48939595432106011721061070Ratregion
5506131UniSTS:4984326631448395814484023Ratregion
5506199Tor1a368398003589800725Ratregion
5506539HSPA5_98879631384187913842674Ratregion
5506260D6S451168932273028322731971Ratregion
5506688REN36013229390353389035566Ratregion
5506821G4613020231247135612471557Ratregion
5506690REN36007274390366579036930Ratregion
5506692REN36008232390364509036681Ratregion
5506694REN36005259390373819037639Ratregion
5506696REN36009225390362479036471Ratregion
5506700REN36142251390060199006269Ratregion
5506702REN36342215389579618958175Ratregion
5507105UniSTS:224561220376170197617238Ratregion
5507053UniSTS:224268186382517578251942Ratregion
5499725UniSTS:234347214360139346014147Ratregion
5499727UniSTS:234364182383062238306404Ratregion
5499733UniSTS:23436924931003195610032204Ratregion
5499733UniSTS:234369249393993299399577Ratregion
5499735UniSTS:23438515632347984723480002Ratregion
5499739UniSTS:23439621231836106818361279Ratregion
5499731UniSTS:234365124397178099717932Ratregion
5499587At-9B-134114132504684425047984Ratregion
5503122GOLGA1-197632334126223342237Ratregion
5500831G0709310731324155213241658Ratregion
5500625RH13634020931032750410327713Ratregion
5503422DXS8087986368350876836072Ratregion
5501341ECD21896237390364509036686Ratregion
5501343ECD22059232390359079036138Ratregion
5501686UniSTS:265729247339072203907466Ratregion
5501746MARC_10305-10306:998934185:198132338708123388061Ratregion
5501920MARC_17455-17456:1028295191:1678388826578883334Ratregion
5505540D2S171152732283120122832577Ratregion
5502503RH1251030389474918948666Ratregion
5502485RH125061195390123779012571Ratregion
5502271RH124237154387439668744119Ratregion
5502531RH125204162337965413798168Ratregion
5502531RH125204162337965413796702Ratregion
5502567RH12536827331384195913842231Ratregion
11528616rs10698495631329474613294746Ratregion
11528617rs10675850031223622112236221Ratregion
11528618rs10698764431521766815217668Ratregion
Position Markers

Flank 1: (D3Mgh9)
Rat AssemblyChrPosition (strand)Source
Rnor_6.033,285,929 - 3,286,073NCBI
Rnor_5.038,648,011 - 8,648,155UniSTS
RGSC_v3.434,010,231 - 4,010,375UniSTS
RGSC_v3.434,010,230 - 4,010,375RGD
RGSC_v3.134,010,230 - 4,010,375RGD
Celera33,481,286 - 3,481,430UniSTS
SHRSP x BN Map32.2599RGD
SHRSP x BN Map32.2599UniSTS
FHH x ACI Map32.53RGD
Peak: (D3Rat55)
Rat AssemblyChrPosition (strand)Source
Rnor_6.0310,187,496 - 10,187,633NCBI
Rnor_5.0315,546,858 - 15,546,995UniSTS
RGSC_v3.4310,761,681 - 10,761,818UniSTS
RGSC_v3.4310,761,680 - 10,761,818RGD
RGSC_v3.1310,656,176 - 10,656,313RGD
Celera39,688,743 - 9,688,880UniSTS
Cytogenetic Map3p12UniSTS
RH 3.4 Map359.5RGD
RH 3.4 Map359.5UniSTS
RH 2.0 Map30.0RGD
Flank 2: (D3Rat49)
Rat AssemblyChrPosition (strand)Source
Rnor_6.0328,136,728 - 28,136,884NCBI
Rnor_5.0333,340,297 - 33,340,453UniSTS
RGSC_v3.4323,762,472 - 23,762,628UniSTS
RGSC_v3.4323,762,471 - 23,762,628RGD
RGSC_v3.1323,658,844 - 23,659,000RGD
Celera325,815,457 - 25,815,613UniSTS
RH 3.4 Map3295.7RGD
RH 3.4 Map3295.7UniSTS
SHRSP x BN Map312.0598UniSTS
SHRSP x BN Map312.0598RGD


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631679Cm10Cardiac mass QTL 107.340.0001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)3125786001Rat
70202Alc19Alcohol consumption QTL 192.5drinking behavior trait (VT:0001422)ethanol intake volume to total fluid intake volume ratio (CMO:0001591)3128136884Rat
631545Bp85Blood pressure QTL 853.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)3128500807Rat
61468Bp15Blood pressure QTL 154.4blood pressure trait (VT:0000183)diastolic blood pressure (CMO:0000005)3128500807Rat
61468Bp15Blood pressure QTL 154.4blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)3128500807Rat
61468Bp15Blood pressure QTL 154.4blood pressure trait (VT:0000183)pulse pressure (CMO:0000292)3128500807Rat
631831Alc8Alcohol consumption QTL 82.7consumption behavior trait (VT:0002069)calculated ethanol drink intake rate (CMO:0001615)3132972944Rat
4889966Bss95Bone structure and strength QTL 954.4tibia area (VT:1000281)tibia-fibula cross-sectional area (CMO:0001718)3137891710Rat
2312664Scl62Serum cholesterol level QTL 620.05blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)3139773425Rat
2290452Scl56Serum cholesterol level QTL 562.26blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)3195176874Rat
1358185Ept6Estrogen-induced pituitary tumorigenesis QTL 66.7pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)35711366000866Rat
2292615Ept17Estrogen-induced pituitary tumorigenesis QTL 176.7pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)35711366000866Rat
1298526Arunc3Aerobic running capacity QTL 32.2exercise endurance trait (VT:0002332)maximum distance run on treadmill (CMO:0001406)3263142133477544Rat
10401810Kidm53Kidney mass QTL 53kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)3263142148562146Rat
70203Gcr2Gastric cancer resistance QTL 22.6stomach morphology trait (VT:0000470)stomach tumor susceptibility score (CMO:0002043)3328592928136884Rat
1358357Srcrtb1Stress Responsive Cort Basal QTL 16.360.002blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)3328592928136884Rat
8693641Alc30Alcohol consumption QTL 3020.739drinking behavior trait (VT:0001422)calculated ethanol drink intake rate (CMO:0001615)3565463925105730Rat
1558654Bw56Body weight QTL 564.50.0000171body mass (VT:0001259)body weight (CMO:0000012)3600074834394365Rat
6893355Bw101Body weight QTL 1010.40.38body mass (VT:0001259)body weight (CMO:0000012)3600074834394365Rat
6893363Bw105Body weight QTL 1052.60.0036body mass (VT:0001259)body weight (CMO:0000012)3600074834394365Rat
70191BpQTLcluster4Blood pressure QTL cluster 43arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)3600074851687917Rat
70191BpQTLcluster4Blood pressure QTL cluster 43arterial blood pressure trait (VT:2000000)absolute change in systolic blood pressure (CMO:0000607)3600074851687917Rat
1558647Cm46Cardiac mass QTL 465.40.0000055heart mass (VT:0007028)heart wet weight (CMO:0000069)3600086634394121Rat
1558650Cm48Cardiac mass QTL 4840.0001heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)3600086634394121Rat
1558657Cm43Cardiac mass QTL 436.60.0000000293heart mass (VT:0007028)heart wet weight (CMO:0000069)3600086634394121Rat
1358905Hrtrt17Heart rate QTL 175.90.000014heart pumping trait (VT:2000009)heart rate (CMO:0000002)31009408193415837Rat
2298542Neuinf11Neuroinflammation QTL 113.9nervous system integrity trait (VT:0010566)spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126)31011931879772001Rat
1358885Bp251Blood pressure QTL 2513.8arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)310639528127023997Rat
1358888Bp264Blood pressure QTL 2644.43arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)310639528127023997Rat
11528620Bss113Bone structure and strength QTL 1139.750.00000000017femur morphology trait (VT:0000559)femoral neck width (CMO:0001695)31223622115217668Rat
634306Bp140Blood pressure QTL 1403.30.0013arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)31312691436600143Rat
634306Bp140Blood pressure QTL 1403.30.0013arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)31312691436600143Rat
634306Bp140Blood pressure QTL 1403.30.0013arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)31312691436600143Rat
634306Bp140Blood pressure QTL 1403.30.0013arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)31312691436600143Rat
634306Bp140Blood pressure QTL 1403.30.0013arterial blood pressure trait (VT:2000000)heart rate (CMO:0000002)31312691436600143Rat
634306Bp140Blood pressure QTL 1403.30.0013arterial blood pressure trait (VT:2000000)heart rate (CMO:0000002)31312691436600143Rat
634306Bp140Blood pressure QTL 1403.30.0013arterial blood pressure trait (VT:2000000)body weight (CMO:0000012)31312691436600143Rat
634306Bp140Blood pressure QTL 1403.30.0013arterial blood pressure trait (VT:2000000)body weight (CMO:0000012)31312691436600143Rat
631568Bp92Blood pressure QTL 922.20.005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)31312691441510346Rat
2325840Bp345Blood pressure QTL 3450.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)31409041129084626Rat
731172Bp151Blood pressure QTL 1510.04arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)31409041148562146Rat
12879849Bw180Body weight QTL 1800.037body mass (VT:0001259)body weight (CMO:0000012)31409041148562146Rat
12879850Cm91Cardiac mass QTL 910.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)31409041148562146Rat
12879851Cm92Cardiac mass QTL 920.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)31409041148562146Rat
12879852Cm93Cardiac mass QTL 930.001heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)31409041148562146Rat
12879853Am5Aortic mass QTL 50.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)31409041148562146Rat
12879854Kidm63Kidney mass QTL 630.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)31409041148562146Rat
631676Cm8Cardiac mass QTL 87.030.0001aorta mass (VT:0002845)aorta weight (CMO:0000076)31802366463023664Rat
10450794Scl69Serum cholesterol level QTL 696.30.001blood LDL cholesterol amount (VT:0000181)blood low density lipoprotein cholesterol level (CMO:0000053)32122380366223803Rat
10450804Scl70Serum cholesterol level QTL 704.70.001blood LDL cholesterol amount (VT:0000181)blood low density lipoprotein cholesterol level (CMO:0000053)32122380366223803Rat
631685Bp118Blood pressure QTL 1183.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)32465522569655225Rat
10450806Scl71Serum cholesterol level QTL 715.80.001blood LDL cholesterol amount (VT:0000181)blood low density lipoprotein cholesterol level (CMO:0000053)32477298428136884Rat
10450808Scl72Serum cholesterol level QTL 724.40.001blood LDL cholesterol amount (VT:0000181)blood low density lipoprotein cholesterol level (CMO:0000053)32477298428136884Rat
10450811Scl73Serum cholesterol level QTL 734.70.001blood LDL cholesterol amount (VT:0000181)blood low density lipoprotein cholesterol level (CMO:0000053)32477298428136884Rat
1298073Cm13Cardiac mass QTL 132.5heart mass (VT:0007028)heart wet weight (CMO:0000069)32563336639248391Rat
631832Sach1Saccharin preference QTL 12.70.02consumption behavior trait (VT:0002069)calculated saccharin drink intake volume (CMO:0001600)32813672845772990Rat
2313049Bss72Bone structure and strength QTL 722.60.0001tibia area (VT:1000281)tibia midshaft cross-sectional area (CMO:0001717)32813672851687917Rat
2313076Bss74Bone structure and strength QTL 7420.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)32813672851687917Rat
2313079Bss73Bone structure and strength QTL 731.5tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)32813672851687917Rat
2313093Bmd77Bone mineral density QTL 772.20.0001tibia mineral mass (VT:1000283)cortical volumetric bone mineral density (CMO:0001730)32813672851687917Rat
2313101Bmd76Bone mineral density QTL 763.60.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)32813672851687917Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Gcr2

RGD Curation Notes
Note Type Note Reference