BpQTLcluster7 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: BpQTLcluster7 (Blood pressure QTL cluster 7) Rattus norvegicus

Symbol: BpQTLcluster7
Name: Blood pressure QTL cluster 7
RGD ID: 70196
Trait: arterial blood pressure trait   (VT:2000000)    
Measurement Type: systolic blood pressure   (CMO:0000004)    
LOD Score: 6.82
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2672,202,632 - 117,202,632RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0675,623,277 - 120,623,277RGD_MAPPER_PIPELINERnor6.0
Rnor_5.062,916,542 - 85,163,175RGDRnor5.0
RGSC_v3.463,158,498 - 75,049,527RGDRGSC3.4
RGSC_v3.1675,052,653 - 120,052,653RGD
Cross Type: F2
Strains Crossed: GH BN 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
hypertension  (IDA)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Vertebrate Trait

Rat Strain
BN  (IEA)
GH  (IEA)

References

References - curated
# Reference Title Reference Citation
1. QTL Data Transfer QTL data import from the RatMap database
2. New target regions for human hypertension via comparative genomics. Stoll M, etal., Genome Res 2000 Apr;10(4):473-82.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
68418Dio2iodothyronine deiodinase 26109665523109679809Rat
3664Srsf5serine and arginine rich splicing factor 56100605165100610192Rat
3911Tshrthyroid stimulating hormone receptor6110341585110475297Rat
3596Rps29ribosomal protein S2968763522987636627Rat
3851Tgfb3transforming growth factor, beta 36105704058105726661Rat
69194Gphngephyrin69695436597483617Rat
2807Foxa1forkhead box A167509990775136534Rat
61844Psma3proteasome 20S subunit alpha 368948374189503775Rat
61849Psma6proteasome 20S subunit alpha 667276553472796554Rat
70907Actn1actinin, alpha 169899855399093334Rat
3762Sstr1somatostatin receptor 167583229275836806Rat
70894Acot1acyl-CoA thioesterase 16103636173103644167Rat
62009Zfp36l1zinc finger protein 36, C3H type-like 169893070598935748Rat
3171NfkbiaNFKB inhibitor alpha67285871372861941Rat
621556Aldh6a1aldehyde dehydrogenase 6 family, member A16104077975104098636Rat
621230Pnma1PNMA family member 16103782244103784029Rat
727829Sgpp1sphingosine-1-phosphate phosphatase 169442533994446534Rat
727844Gpr135G protein-coupled receptor 13569062753390630661Rat
2582Esr2estrogen receptor 269485843894909630Rat
620906Six1SIX homeobox 169174673991751975Rat
621279Arf6ADP-ribosylation factor 668785374287854890Rat
621417Kcnh5potassium voltage-gated channel subfamily H member 569361517493908107Rat
620664Hspa2heat shock protein family A (Hsp70) member 269512850495131281Rat
620212Nrxn3neurexin 36107641760109272849Rat
727780Gpx2glutathione peroxidase 269549358995496877Rat
621540Trim9tripartite motif-containing 968875682488856588Rat
69400Synj2bpsynaptojanin 2 binding protein6101189714101227400Rat
69246Gtf2a1general transcription factor 2A subunit 16110488891110521502Rat
61928Hif1ahypoxia inducible factor 1 subunit alpha69262405992669262Rat
620098Mgat2alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase68765636087658849Rat
620119Fntbfarnesyltransferase, CAAX box, subunit beta69553654095619587Rat
621611Jdp2Jun dimerization protein 26105261619105302386Rat
621656Timm9translocase of inner mitochondrial membrane 968961009489622924Rat
621390Srp54asignal recognition particle 54A67258758472626878Rat
3425Psen1presenilin 16103323052103375088Rat
620963Eif2s1eukaryotic translation initiation factor 2 subunit alpha69767282997697499Rat
621156Rpl36al1ribosomal protein L36A like 168765480887656202Rat
621215Vsx2visual system homeobox 26104214842104240264Rat
628874Mnat1MNAT1 component of CDK activating kinase69181470391971945Rat
621101MaxMYC associated factor X69563685995662204Rat
68380Ltbp2latent transforming growth factor beta binding protein 26104429947104530498Rat
621055Acot2acyl-CoA thioesterase 26103611738103619404Rat
1304671Snapc1small nuclear RNA activating complex, polypeptide 169268478592710772Rat
628756Npc2NPC intracellular cholesterol transporter 26104397239104418161Rat
620107NumbNUMB, endocytic adaptor protein6103431400103553422Rat
619850Pgfplacental growth factor6104816102104826685Rat
1303145Abhd12babhydrolase domain containing 12B68866862788696435Rat
1304923Batfbasic leucine zipper ATF-like transcription factor6105353715105376051Rat
620197Slc8a3solute carrier family 8 member A36100874359101007989Rat
708531Mthfd1methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 169497786295045375Rat
3681Slc10a1solute carrier family 10 member 16100613045100626670Rat
621444Slc25a21solute carrier family 25 member 2167420343974702902Rat
727810Frmd6FERM domain containing 668934598389419579Rat
735076Zbtb25zinc finger and BTB domain containing 2569507069995095888Rat
621470Adam4a disintegrin and metalloprotease domain 46101123284101125730Rat
620147Sel1lSEL1L adaptor subunit of SYVN1 ubiquitin ligase6110735450110779695Rat
735172Rab15RAB15, member RAS oncogene family69549958495524073Rat
621888Prkchprotein kinase C, eta69229200092490663Rat
620687Pyglglycogen phosphorylase L68869759888740260Rat
620820Eif2b2eukaryotic translation initiation factor 2B subunit beta6104866926104873351Rat
708497Sipa1l1signal-induced proliferation-associated 1 like 16101839351102118408Rat
2626FosFos proto-oncogene, AP-1 transcription factor subunit6105121170105124036Rat
620829Akap5A-kinase anchoring protein 569505152795061075Rat
620842Gemin2gem (nuclear organelle) associated protein 267670642476721154Rat
735219Entpd5ectonucleoside triphosphate diphosphohydrolase 56104019095104055311Rat
620435Sos2SOS Ras/Rho guanine nucleotide exchange factor 268804296688156140Rat
1304647Snx6sorting nexin 667223095072274157Rat
735131Mdga2MAM domain containing glycosylphosphatidylinositol anchor 268474642285608640Rat
3866Nkx2-1NK2 homeobox 167399660174001483Rat
620970Tmed10transmembrane p24 trafficking protein 106104991843105026705Rat
1305116Churc1churchill domain containing 169546448895485208Rat
1305119Daam1dishevelled associated activator of morphogenesis 169038954490550114Rat
1305913Rpl10lribosomal protein L10 like68454477184545791Rat
1304992Fkbp3FKBP prolyl isomerase 368311388583125500Rat
1305089Prorpprotein only RNase P catalytic subunit67266965972762419Rat
1303095Zbtb1zinc finger and BTB domain containing 169509683895125811Rat
1303096Fut8fucosyltransferase 869594924696176677Rat
620642Ralgapa1Ral GTPase activating protein catalytic subunit alpha 167297743273252378Rat
621461Ngbneuroglobin6106744378106749830Rat
1306119Mideasmitotic deacetylase associated SANT domain protein6103784779103854470Rat
1306726Six4SIX homeobox 469180232891816002Rat
1307897FancmFA complementation group M68312690383180455Rat
1305721L3hypdhtrans-L-3-hydroxyproline dehydratase69063631090647106Rat
1307597Arel1apoptosis resistant E3 ubiquitin protein ligase 16104560556104617712Rat
1305080Cdkl1cyclin dependent kinase like 168822415488273434Rat
1305657Ppp2r5eprotein phosphatase 2 regulatory subunit B', epsilon69416884694317872Rat
1307442Arid4aAT-rich interaction domain 4A68952245989593868Rat
1305636Zfp410zinc finger protein 4106103963265103990252Rat
1307253Sav1salvador family WW domain containing protein 168847853688500121Rat
1303126Smoc1SPARC related modular calcium binding 16100701330100897441Rat
1303128Rnf113a2ring finger protein 113A26104063677104064958Rat
2151Arg2arginase 269793600297961379Rat
620986Rtn1reticulon 169076321290983436Rat
1306310MbipMAP3K12 binding inhibitory protein 167380813373825394Rat
13046242700097O09RiklRIKEN cDNA 2700097009 gene like67254216672587511Rat
1307393Wdr89WD repeat domain 8969435046894382085Rat
1308574Flrt2fibronectin leucine rich transmembrane protein 26114777547114872688Rat
1306982Cfl2cofilin 267235566472359709Rat
1307621C6h14orf28similar to human chromosome 14 open reading frame 2868296530482973942Rat
1307392Ift43intraflagellar transport 436105729734105806257Rat
1306115Pcnx1pecanex 16101565461101702339Rat
3569Rgs6regulator of G-protein signaling 66102264451102796311Rat
1306006Brms1lBRMS1 like transcriptional repressor67326667373300630Rat
1307187Nek9NIMA-related kinase 96104944056104984538Rat
1307795Zfyve1zinc finger FYVE-type containing 16103184938103234111Rat
1307122Zc2hc1czinc finger, C2HC-type containing 1C6104932631104941555Rat
735119Atp6v1dATPase H+ transporting V1 subunit D69765672597672295Rat
1311502Ston2stonin 26110567485110676376Rat
1311087Exd2exonuclease 3'-5' domain containing 26100116867100150452Rat
1308327Alkbh1alkB homolog 1, histone H2A dioxygenase6107068301107088784Rat
1310202Galnt16polypeptide N-acetylgalactosaminyltransferase 166100168943100250718Rat
1307273Abcd4ATP binding cassette subfamily D member 46104246459104260965Rat
1560556Ttc6tetratricopeptide repeat domain 667513682775368176Rat
1310207Tmem63ctransmembrane protein 63c6106667389106738778Rat
1308907Gpatch2lG patch domain containing 2-like6105883383105935644Rat
1310462Rdh12retinol dehydrogenase 1269801546598028388Rat
3373Ppm1aprotein phosphatase, Mg2+/Mn2+ dependent, 1A69143909491486139Rat
1559639Rpl10al1ribosomal protein L10A like 168734960487350328Rat
1311326Klhl28kelch-like family member 2868298736083018971Rat
1311327Acyp1acylphosphatase 16104919162104932348Rat
1310994Irf2bplinterferon regulatory factor 2 binding protein-like6106527179106531294Rat
1561024Mphosph6-ps2M phase phosphoprotein 6, pseudogene 269929722399298400Rat
1310330Slc38a6solute carrier family 38, member 669198765292076416Rat
1310843Gle1-ps1GLE1 RNA export mediator, pseudogene 16107124892107127024Rat
1359208Dmac2ldistal membrane arm assembly component 2 like68820558088223934Rat
1311962Pole2DNA polymerase epsilon 2, accessory subunit68767470287712723Rat
1310769Erg28ergosterol biosynthesis 28 homolog6105474112105483078Rat
1312001Rdh11retinol dehydrogenase 1169797937797995252Rat
1311438Pighphosphatidylinositol glycan anchor biosynthesis, class H69787490397897188Rat
1308362Plekhh1pleckstrin homology, MyTH4 and FERM domain containing H169783928897888712Rat
1309051Ppp1r36protein phosphatase 1, regulatory subunit 3669513852695159102Rat
1309052Dpf3double PHD fingers 36102841403103125558Rat
1310474Togaram1TOG array regulator of axonemal microtubules 168301902583083343Rat
1310476Mphosph6-ps1M phase phosphoprotein 6, pseudogene69932107199322114Rat
1560681Rad51bRAD51 paralog B69809652598640988Rat
1310629Nkx2-8NK2 homeobox 867408627474087977Rat
1306504Klhdc2kelch domain containing 268777718387791609Rat
1310899Fcf1Fcf1 rRNA-processing protein6104617780104629643Rat
1307820Zfyve26zinc finger FYVE-type containing 2669803187498095538Rat
1310528Rhojras homolog family member J69403530794117642Rat
1306515Actr10actin related protein 1068944614189472350Rat
1306199Baz1abromodomain adjacent to zinc finger domain, 1A67238970172512516Rat
1305447Sptlc2serine palmitoyltransferase, long chain base subunit 26106948682107031532Rat
1308732Tmem30btransmembrane protein 30B69225162692254702Rat
1308005Tigar-ps1TP53 induced glycolysis regulatory phosphatase, pseudogene 168750952187511891Rat
1307543Fbxo33F-box protein 3367690061976934232Rat
1306535Dcaf5DDB1 and CUL4 associated factor 569917150699260183Rat
1306232Clec14aC-type lectin domain containing 14A67588147075884612Rat
1306238Angel1angel homolog 16106349125106386202Rat
1306241Dcaf4DDB1 and CUL4 associated factor 46103154847103180992Rat
1308036Dhrs7l1dehydrogenase/reductase (SDR family) member 7-like 169128920091312010Rat
1309492CipcCLOCK-interacting pacemaker6106595011106613732Rat
1309493Rps6kl1ribosomal protein S6 kinase-like 16104783227104799895Rat
1306250L2hgdhL-2-hydroxyglutarate dehydrogenase68816442988205585Rat
1309207Ppp2r3cprotein phosphatase 2, regulatory subunit B'', gamma67264702572670885Rat
1306949Insm2INSM transcriptional repressor 267297386172976453Rat
1308702Prpf39pre-mRNA processing factor 3968308898183113826Rat
735098Flvcr2FLVCR choline and putative heme transporter 26105408355105472355Rat
1306567Trmt5tRNA methyltransferase 569196355891987660Rat
1308755Rbm25RNA binding motif protein 256103271775103319090Rat
1306492Ninninein68852540588627710Rat
1308089Plekhg3pleckstrin homology and RhoGEF domain containing G369526575695308952Rat
1309103Sec23aSec23 homolog A, COPII coat complex component67665879376706125Rat
1308263Adck1aarF domain containing kinase 16107277170107377057Rat
1306798Lin52lin-52 DREAM MuvB core complex component6104098818104199323Rat
1309058Fam161bFAM161 centrosomal protein B6103990603104007754Rat
1309357Lrfn5leucine rich repeat and fibronectin type III domain containing 567946640379822821Rat
1310311Dnaaf2dynein, axonemal, assembly factor 268766110187670267Rat
1310315Prox2prospero homeobox 26104731385104758619Rat
1305786Plek2pleckstrin 269770012397719417Rat
1309227Mlh3mutL homolog 36104881483104917686Rat
1310296Med6mediator complex subunit 66101270410101283929Rat
1308211Klhdc1kelch domain containing 168767018287765431Rat
1307704Riox1ribosomal oxygenase 16103579642103582260Rat
1308446Zdhhc22zinc finger DHHC-type palmitoyltransferase 226106629090106646996Rat
1308455Tmx1thioredoxin-related transmembrane protein 168896069188971744Rat
1308917JkampJNK1/MAPK8-associated membrane protein69064804390661985Rat
1308071Pals1protein associated with LIN7 1, MAGUK p55 family member69754813397654163Rat
1309325Trappc6btrafficking protein particle complex subunit 6B67674089876752035Rat
1309669Acot6acyl-CoA thioesterase 66103732372103741446Rat
1305248Syne2spectrin repeat containing nuclear envelope protein 269453708894848085Rat
1562299Taf8l1TATA-box binding protein associated factor 8 like 169929390799295840Rat
1563850Akr1b8-ps2aldo-keto reductase family 1, member B8, pseudogene 267756972077571967Rat
1562028Map4k5mitogen-activated protein kinase kinase kinase kinase 568828408788377118Rat
1359636Prps1l3phosphoribosyl pyrophosphate synthetase 1-like 367475533174763493Rat
1559545RGD1559545similar to ATPase inhibitory factor 168982191689842882Rat
1559921Mifl3macrophage migration inhibitory factor like 369926996299270606Rat
1565752Dnajc17l1DnaJ heat shock protein family (Hsp40) member C17 like 169931721899318129Rat
1561926Snw1SNW domain containing 16107095450107119536Rat
1562540Ccdc196coiled-coil domain containing 19669691396096939415Rat
1563583Ttll5tubulin tyrosine ligase like 56105483091105700920Rat
1564488Lrrc74aleucine rich repeat containing 74A6106386276106417112Rat
1311236Slc39a9solute carrier family 39, member 96100291537100330419Rat
1565002Dhrs7dehydrogenase/reductase 769133225991347856Rat
1562149Map3k9mitogen-activated protein kinase kinase kinase 96101423754101488822Rat
1560894Ccdc175coiled-coil domain containing 17569066194890745015Rat
1564008Dact1dishevelled-binding antagonist of beta-catenin 168979067689818254Rat
1563496Wbp11-ps3WW domain binding protein 11, pseudogene 36107227781107230018Rat
1561148Gle1-ps7GLE1 RNA export mediator, pseudogene 76107144085107146180Rat
1565917Acot5acyl-CoA thioesterase 56103701908103708696Rat
1565716Lrrc9leucine rich repeat containing 969101773991095847Rat
1564089Acot3acyl-CoA thioesterase 36103682518103688735Rat
1359615Dlstdihydrolipoamide S-succinyltransferase6104758511104783296Rat
1563216Isca2iron-sulfur cluster assembly 26104418509104420019Rat
1560978Bbof1basal body orientation factor 16104055246104081036Rat
1559456Six6os1Six6 opposite strand transcript 169157918591615183Rat
1311176Paplnpapilin, proteoglycan-like sulfated glycoprotein6103398166103432199Rat
1311149Coq6coenzyme Q6 monooxygenase6104007814104019888Rat
1310497Six6SIX homeobox 669163456891639548Rat
1562381Rps17l1ribosomal protein S17 like 169523656595237253Rat
1359232Atl1atlastin GTPase 168837716888475242Rat
1560824Pla2g1bl1phospholipase A2 group IB like 16100679993100680397Rat
1310518Ptgr2prostaglandin reductase 26103931367103963113Rat
1561115Ccdc177coiled-coil domain containing 1776100404526100411112Rat
1303243Sptbspectrin, beta, erythrocytic69531034295437221Rat
1359557Esrrbestrogen-related receptor beta6106007701106163136Rat
1560838Pax9paired box 967418674974203508Rat
1560347Tex21testis expressed 2169493138894969409Rat
1359133Aldoart2aldolase 1 A retrogene 267293982172941511Rat
1359264Gphb5glycoprotein hormone subunit beta 569412996894134585Rat
1586427Pomt2protein-O-mannosyltransferase 26106755462106794849Rat
1586428Eif4a1-ps8eukaryotic translation initiation factor 4A1, pseudogene 867662386676625179Rat
1586488Ddx21-ps10DExD-box helicase 21, pseudogene 1067639943576400992Rat
1582892Pcnx4pecanex 469112506391170423Rat
1586460Mrto4-ps8mRNA turnover 4, ribosome maturation factor, pseudogene 867660827276609088Rat
1566112Plekhd1pleckstrin homology and coiled-coil domain containing D16100340655100371942Rat
1565985Ttc9tetratricopeptide repeat domain 96101333274101368110Rat
1561721Fscbfibrous sheath CABYR binding protein68252784982530641Rat
1566220Heatr4HEAT repeat containing 46103574360103611578Rat
1582948Sec13-ps3SEC13 homolog, nuclear pore and COPII coat complex component, pseudogene 367890155878903012Rat
1566048Pqbp1-ps2polyglutamine binding protein 1, pseudogene 26116872017116875586Rat
1562622Tmem229btransmembrane protein 229B69777164597819582Rat
1582926Rpl26-ps13ribosomal protein L26, pseudogene 1369201780192018276Rat
1582931Pcbp2-ps9poly(rC) binding protein 2, pseudogene 967916269279163639Rat
1565693Gle1l1GLE1 RNA export mediator like 16107202205107204543Rat
1564082Vash1vasohibin 16106330374106345740Rat
1564654Syt16synaptotagmin 1669272141592972140Rat
1564946Ylpm1YLP motif containing 16104642615104718508Rat
1564393Garin2golgi associated RAB2 interactor family member 269748956297534729Rat
1589343Ism2isthmin 26106921213106944291Rat
1586354Snx7-ps1sorting nexin 7, pseudogene 168893116388934114Rat
1593648Bckdk-ps1branched chain ketoacid dehydrogenase kinase, pseudogene 169792618297927900Rat
1587342Ak2-ps1adenylate kinase 2, pseudogene 169701025497011724Rat
1587174Vrtnvertebrae development associated6104294655104296919Rat
1591349Dnal1dynein, axonemal, light chain 16103747801103779015Rat
1592286Rpl36-ps7ribosomal protein L36, pseudogene6113712903113717609Rat
1589336Tmed8transmembrane p24 trafficking protein family member 86106806973106841271Rat
1589285Ahsa1activator of Hsp90 ATPase activity 16106913296106921347Rat
1585290SlirpSRA stem-loop interacting RNA binding protein6107088760107097791Rat
1586305Tomm20ltranslocase of outer mitochondrial membrane 20 like68959401689612070Rat
1588546Cyp51a1-ps1cytochrome P450, family 51, subfamily a, polypeptide 1, pseudogene 167672542176727572Rat
1586499G3bp1-ps7G3BP stress granule assembly factor 1, pseudogene 767629770776301640Rat
1589026Lrr1leucine rich repeat protein 168764319587651894Rat
1587663Ldha-ps17lactate dehydrogenase A, pseudogene 1767572705975728506Rat
1585176Kiaa0586KIAA0586 homolog68962271189725951Rat
1560665Timm17al1translocase of inner mitochondrial membrane 17a-like 167963705479637877Rat
1582962Apoo-ps1apolipoprotein O, pseudogene 167885871878859404Rat
1589291Vipas39VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog6106888284106913139Rat
1583694Gle1-ps6GLE1 RNA export mediator, pseudogene 66107159244107161420Rat
1589004Syndig1lsynapse differentiation inducing 1-like6104318096104344989Rat
1597353Rpl23al7ribosomal protein L23A like 769170727191707812Rat
1593470Gemin8-ps8gem (nuclear organelle) associated protein 8, pseudogene 868427366484274511Rat
1597397Cct6a-ps11chaperonin containing Tcp1, subunit 6A (zeta 1), pseudogene 1168044267280487379Rat
1598344Pcna-ps1proliferating cell nuclear antigen, pseudogene 167779210877793917Rat
1597086Pnnpinin, desmosome associated protein67675813876766451Rat
1595528Susd6sushi domain containing 66100437834100531621Rat
1596109Eif2d-ps2eukaryotic translation initiation factor 2D, pseudogene 268286678382868664Rat
1595693Cep128centrosomal protein 1286109951009110328686Rat
1597173Acot5-ps1acyl-CoA thioesterase 5, pseudogene 16103721814103729656Rat
1597174Rpl23al8ribosomal protein L23A like 86103651415103651852Rat
1592352H2az2l2H2A.Z histone variant 2 like 268432180184322513Rat
1593493Kpna1-ps8karyopherin subunit alpha 1, pseudogene 86112516570112517700Rat
1592266Rpl11-ps10ribosomal protein L11, pseudogene 1068621246286220022Rat
1595409ErhERH, mRNA splicing and mitosis factor6100280933100291200Rat
1593640Atp5pdl1ATP synthase peripheral stalk subunit d like 169869672698697181Rat
1596753Acot4acyl-CoA thioesterase 46103668699103674037Rat
1597022Adam4l1a disintegrin and metallopeptidase domain 4-like 16101071648101074111Rat
1597025Smarce1-ps5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, pseudogene 568852027888524964Rat
1594757Mis18bp1MIS18 binding protein 168318249783231978Rat
1589353Noxred1NADP-dependent oxidoreductase domain containing 16106862350106888113Rat
1589363Gstz1glutathione S-transferase zeta 16106794594106805284Rat
1589368Samd15sterile alpha motif domain containing 156106841405106856197Rat
1594186Adtrp-ps1androgen-dependent TFPI-regulating protein, pseudogene 169799537297998563Rat
1598268Nt5c2-ps45'-nucleotidase, cytosolic II, pseudogene 467787813777879911Rat
1598269Paics-ps4phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase, pseudogene 467768566177687084Rat
1597693Dnajc17-ps2DnaJ heat shock protein family (Hsp40) member C17, pseudogene 26100030088100030817Rat
1598258Dnajc17-ps3DnaJ heat shock protein family (Hsp40) member C17, pseudogene 36100020724100021316Rat
1598273Ldha-ps5lactate dehydrogenase A, pseudogene 567351843473519312Rat
1598274Gapdh-ps103Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 10367348811273489095Rat
1598264Ube2e3-ps1ubiquitin-conjugating enzyme E2E 3, pseudogene 169135235091352964Rat
1597100Phb1-ps13prohibitin 1, pseudogene 136113779124113781487Rat
1597101Pomp-ps1proteasome maturation protein, pseudogene 16113385570113386040Rat
1597102Pa2g4-ps1proliferation-associated 2G4, pseudogene 16113241238113242425Rat
1597103Aimp2-ps1aminoacyl tRNA synthetase complex-interacting multifunctional protein 2, pseudogene 16111083223111084179Rat
1598309Ppil2-ps1peptidylprolyl isomerase like 2, pseudogene 16100024128100025851Rat
1598271Rps6-ps8ribosomal protein S6, pseudogene 867529572875296526Rat
1598272Pmpcb-ps2peptidase, mitochondrial processing subunit beta, pseudogene 267402462074043020Rat
1597505Faul1FAU ubiquitin like and ribosomal protein S30 fusion like 168322875183229261Rat
2311610Cox16cytochrome c oxidase assembly factor COX166101162231101181277Rat
2315525Nemfnuclear export mediator factor68779165087835826Rat
2319136Micos10l1mitochondrial contact site and cristae organizing system subunit 10 like 169136525091365507Rat
2318430Alad-ps1aminolevulinate dehydratase, pseudogene 168691994486921014Rat
2319091Gemin8-ps1gem (nuclear organelle) associated protein 8, pseudogene 168056394380564624Rat
2321461Rpl15-ps2ribosomal protein L15, pseudogene 267411817574118794Rat
2322884Entr1l1endosome associated trafficking regulator 1 like 167933121079332658Rat
2322957Tra2a-ps1transformer 2 alpha, pseudogene 16112038960112040601Rat
2320876Acp1-ps1acid phosphatase 1, pseudogene 168806492388066299Rat
2322466Trim13-ps1tripartite motif-containing 13, pseudogene 168069387880695270Rat
2322517Fam167b-ps1family with sequence similarity 167, member B, pseudogene 168062965380630098Rat
2323161Mepce-ps1methylphosphate capping enzyme, pseudogene 16111173160111175910Rat
2323258Serpinb5-ps1serpin family B member 5, pseudogene 16115542815115543441Rat
2323565Lsm14a-ps1LSM14A mRNA processing body assembly factor, pseudogene 16109533134109534328Rat
4888535Mir3593microRNA 359367325264773252737Rat
2323636Fam177a1family with sequence similarity 177, member A167263262872647553Rat
2323682Vti1bvesicle transport through interaction with t-SNAREs 1B69795770097976491Rat
2323769Lrif1-ps2ligand dependent nuclear receptor interacting factor, pseudogene 26107524191107525582Rat
2324554Pcbp2-ps1poly(rC) binding protein 2, pseudogene 16106300563106301925Rat
2324062LOC100362796cDNA sequence BC048679-like68729662687331624Rat
2325061Ndufaf2-ps1NADH:ubiquinone oxidoreductase complex assembly factor 2, pseudogene 169907473899075236Rat
2325062Ftl1l2ferritin light chain 1 like 267324261273243527Rat
2325111Rpl36l6ribosomal protein L36 like 669880953198810620Rat
6489654LOC100911923uncharacterized LOC10091192367395425873994337Rat
6488546Mia2MIA SH3 domain ER export factor 267678750876885246Rat
6492129Odc1-ps1ornithine decarboxylase 1, pseudogene 16100034351100035988Rat
6487637Hmgn4-ps1high mobility group nucleosomal binding domain 4, pseudogene 16112241807112242098Rat
6486301LOC100912568probable ATP-dependent RNA helicase DDX41-like6107230038107231786Rat
6494016Dnajc17-ps1DnaJ heat shock protein family (Hsp40) member C17, pseudogene 16100039837100040821Rat
6487545LOC100912402polyadenylate-binding protein 1-like6102655680102656969Rat
6494851Smim12-ps1small integral membrane protein 12, pseudogene 168735379387354855Rat
6501756Gsta4-ps2glutathione S-transferase alpha 4, pseudogene 268754048887541411Rat
6502380LOC100909680uncharacterized LOC10090968069748944197497915Rat
6495888LOC100910914M-phase phosphoprotein 6-like6100038861100039509Rat
6504372Mipol1mirror-image polydactyly 167475529375090403Rat
6497625Vdac1-ps15voltage-dependent anion channel 1, pseudogene 1568327846983279491Rat
6497809Gle1-ps8GLE1 RNA export mediator, pseudogene 86107236250107238366Rat
6501076Cfl1-ps1cofilin 1, pseudogene 16116892014116892729Rat
7489043Scarna3small Cajal body-specific RNA 369922243299222521Rat
7489013Snora58small nucleolar RNA, H/ACA box 586107080945107081020Rat
7532379LOC102556510uncharacterized LOC1025565106112647333112795278Rat
7532737LOC102549466uncharacterized LOC1025494666114407998114425638Rat
7513588LOC102551922uncharacterized LOC10255192268895437088960566Rat
7536015LOC102552673uncharacterized LOC1025526736101559962101564971Rat
7503266LOC102547797uncharacterized LOC10254779769772965697758676Rat
7503616Rps7-ps24ribosomal protein S7, pseudogene 2469567070895716079Rat
7646365LOC102548461uncharacterized LOC10254846167227414272290681Rat
7662623LOC102555554uncharacterized LOC1025555546106534079106549746Rat
7622910LOC102552601uncharacterized LOC1025526016101502291101514173Rat
7653006LOC102549102uncharacterized LOC10254910268885666188887580Rat
7624969Alg11-ps2ALG11, alpha-1,2-mannosyltransferase, pseudogene 267425915874260776Rat
7625633LOC102548655uncharacterized LOC10254865568824471488246140Rat
7641929Rabggtb-ps1Rab geranylgeranyltransferase subunit beta, pseudogene 169190857391913048Rat
7658560LOC102550062uncharacterized LOC1025500626116762814116822512Rat
7658903LOC102548223uncharacterized LOC10254822368793903487952758Rat
7643655Tmem183a-ps2transmembrane protein 183A, pseudogene 269268808192689176Rat
7644584LOC102547663transcription factor BTF3-like68776203787762866Rat
7661508LOC102556012uncharacterized LOC10255601269516301095171054Rat
7617617LOC102552530uncharacterized LOC1025525306101390013101404833Rat
7571132LOC102546647uncharacterized LOC10254664769866611898690763Rat
7561334LOC102548522uncharacterized LOC10254852267222721772231374Rat
7563444LOC102550345uncharacterized LOC10255034569215313792157129Rat
7582340LOC102551114uncharacterized LOC10255111469298790693002006Rat
7564407LOC102548030uncharacterized LOC10254803068794030987945176Rat
7565188Vcpkmtvalosin containing protein lysine methyltransferase68803648588042151Rat
7551483LOC102549614uncharacterized LOC1025496146114428052114467117Rat
7735797LOC102550910uncharacterized LOC10255091069287743392904513Rat
7751922LOC102551688uncharacterized LOC10255168867388432173909296Rat
7695433LOC102549502uncharacterized LOC10254950269110387691124774Rat
7712380Rpl11-ps7ribosomal protein L11, pseudogene 769494420294944813Rat
8157638Rn7sl1RNA component of signal recognition particle 7SL168763680887637106Rat
7741692LOC102552060uncharacterized LOC10255206068914475889147891Rat
7744426LOC102546497uncharacterized LOC10254649767326553073266513Rat
7748644LOC102552092uncharacterized LOC10255209267399997874011751Rat
7709349LOC102553798uncharacterized LOC10255379869000503790063921Rat
7728577LOC102549675uncharacterized LOC1025496756104984524104992105Rat
7709993LOC102552965uncharacterized LOC1025529656102119638102129558Rat
7681866LOC102547293uncharacterized LOC1025472936103270272103271699Rat
9093992LOC103690066uncharacterized LOC1036900666101227472101246665Rat
9078820LOC103692684small ubiquitin-related modifier 2 pseudogene6113315103113315382Rat
9159722LOC103695309glyceraldehyde-3-phosphate dehydrogenase pseudogene67706861277069628Rat
9167354LOC103695296glyceraldehyde-3-phosphate dehydrogenase pseudogene67232884872329825Rat
9083574LOC103690152disintegrin and metalloproteinase domain-containing protein 21-like6101256441101265828Rat
9084011LOC10369265340S ribosomal protein SA pseudogene69011930790120185Rat
9323203Cetn2l1centrin 2 like 169828300098283445Rat
9378291Mterf1-ps4mitochondrial transcription termination factor 1, pseudogene 468507777585097837Rat
9242302LOC103692643uncharacterized LOC10369264368237426182378710Rat
9299214LOC103692654chloride intracellular channel protein 4 pseudogene68814629188151998Rat
9427736Odc1-ps6ornithine decarboxylase 1, pseudogene 669932568899326687Rat
11360540Rpl35al8ribosomal protein L35A like 869164430291644739Rat
11370304LOC108351238uncharacterized LOC10835123867371889173725872Rat
11454361LOC108351251uncharacterized LOC10835125169148942091503040Rat
11455066LOC108351364uncharacterized LOC10835136467812468678134031Rat
11472163Rpl36a-ps20ribosomal protein L36A, pseudogene 2069100452191004960Rat
11457500LOC10835125360S ribosomal protein L9 pseudogene69064722690647925Rat
11359984LOC108351275uncharacterized LOC1083512756105368936105409361Rat
11452082LOC108351240uncharacterized LOC10835124067432347874333662Rat
11433025LOC10835127440S ribosomal protein S28 pseudogene6105086345105088164Rat
11425096LOC108351370uncharacterized LOC1083513706106468037106470741Rat
11385023LOC108351280uncharacterized LOC1083512806106517139106524101Rat
11407250LOC108351259uncharacterized LOC10835125969298123392987867Rat
11375288LOC108351336U6 snRNA-associated Sm-like protein LSm8 pseudogene69754355197545937Rat
11387951Ppia-ps6peptidylprolyl isomerase A, pseudogene 668281357082814071Rat
11390493LOC108351266uncharacterized LOC10835126669871077098715952Rat
11391162Trnak-cuu9transfer RNA lysine (anticodon CUU) 968947829889478370Rat
11392001LOC108351289uncharacterized LOC1083512896115890070116122724Rat
11500716LOC108351250uncharacterized LOC10835125069032156390324236Rat
11513758LOC108351371non-histone chromosomal protein HMG-17 pseudogene6106591118106594921Rat
11519512LOC108351282uncharacterized LOC1083512826107054936107062699Rat
11519988LOC108351283uncharacterized LOC1083512836109281426109294716Rat
11509237LOC108351242uncharacterized LOC10835124268432810184449141Rat
11515855LOC108351257uncharacterized LOC10835125769172975191740470Rat
11486546LOC108351288uncharacterized LOC1083512886114764986114777523Rat
11488287LOC108351243uncharacterized LOC10835124368444920884471178Rat
11491526LOC108351236uncharacterized LOC10835123667249434372522266Rat
14398595Mir3084a-4microRNA mir-3084a-468781508487815152Rat
41320628LOC120103573uncharacterized LOC1201035736103790733103803320Rat
41086662Ldha-ps27lactate dehydrogenase A, pseudogene 2767353767673538554Rat
41087372LOC120093280U6 spliceosomal RNA67723686577236971Rat
41111149LOC120093440small nucleolar RNA SNORA1767746342877463557Rat
41167763Odc1-ps10ornithine decarboxylase 1, pseudogene 106100080927100081946Rat
41167955LOC120093483small nucleolar RNA U136104716796104716890Rat
41235214LOC120093479small nucleolar RNA SNORA796110505359110505501Rat
41278108LOC120093303U6 spliceosomal RNA67249442772494534Rat
41324021LOC120093288U6 spliceosomal RNA6111923640111923746Rat
41324736LOC120103589uncharacterized LOC1201035896107352595107356059Rat
41088860LOC120093460small nucleolar RNA SNORA1768486751684867654Rat
41114783LOC120103593uncharacterized LOC1201035936111580380111685123Rat
41114950LOC120093357U1 spliceosomal RNA67220306672203228Rat
41140941LOC120093313U1 spliceosomal RNA67221868472218847Rat
41278504LOC120093504U4 spliceosomal RNA68906885389069001Rat
41279451Gle1-ps2GLE1 RNA export mediator, pseudogene 26107183066107185118Rat
41359618LOC120093501U4 spliceosomal RNA68280110282801218Rat
41206585LOC120093507U6 spliceosomal RNA68993071789930823Rat
41326578Ppid-ps7peptidylprolyl isomerase D, pseudogene 769080428990850500Rat
41386977LOC120103557uncharacterized LOC12010355769677556596786927Rat
41092179LOC120093263uncharacterized LOC1200932636109331773109333653Rat
41145298LOC120103582uncharacterized LOC1201035826107013477107021229Rat
41172970LOC120103596uncharacterized LOC1201035966113973500114024212Rat
41173474Acp1-ps3acid phosphatase 1, pseudogene 36110657818110672588Rat
41209044Hsp90ab1-ps16heat shock protein 90 alpha family class B member 1, pseudogene 1667750202177511120Rat
41259651LOC120103592uncharacterized LOC1201035926110747194110756876Rat
41328006LOC120103546uncharacterized LOC12010354668906754789082421Rat
41174745LOC120093305U6 spliceosomal RNA69547414695474248Rat
41174787Snord13l1small nucleolar RNA, C/D box 13 like 168714123087141336Rat
41363902LOC120093216uncharacterized LOC1200932166102742656102752167Rat
41120331LOC120093256uncharacterized LOC12009325668331404683353136Rat
41148093U2l3U2 spliceosomal RNA like 367673093876731128Rat
41188210Trnaa-agc97transfer RNA alanine (anticodon AGC) 9769449270394492783Rat
41261849LOC120093286U6 spliceosomal RNA6107091675107091774Rat
41331265Ldha-ps26lactate dehydrogenase A, pseudogene 2667352805573528933Rat
41365158LOC120103579uncharacterized LOC1201035796105420290105426393Rat
41097438LOC120093220uncharacterized LOC1200932206109042644109052706Rat
41188981Ddx41-ps1DEAD-box helicase 41, pseudogene 16107156477107157149Rat
41189254LOC120103554uncharacterized LOC12010355469438221594395832Rat
41190543LOC120103584WW domain-binding protein 11-like6107141542107143455Rat
41393512LOC120093467small nucleolar RNA SNORA1767401621574016333Rat
41155391LOC120093489U2 spliceosomal RNA67521655975216724Rat
41179058LOC120103570uncharacterized LOC1201035706100819254100820366Rat
41179368LOC120093436small nucleolar RNA SNORA1768277764282777773Rat
41191761Mt1-ps4metallothionein 1, pseudogene 46104866408104866746Rat
41265170LOC120093441small nucleolar RNA SNORA176109773449109773570Rat
41343659LOC120093108dehydrogenase/reductase SDR family member 7-like69119740591207825Rat
41343863LOC120093465U2 spliceosomal RNA68601876886018953Rat
41367672LOC120093335U1 spliceosomal RNA67222704472227207Rat
41156721LOC120093430small nucleolar RNA SNORA4868340667483406809Rat
41215294Rpl26-ps4ribosomal protein L26, pseudogene 469206709892067681Rat
41344929LOC120093217uncharacterized LOC1200932176102770524102773333Rat
41369129LOC12010356260S ribosomal protein L39-like69880152498804501Rat
41369745LOC120103553uncharacterized LOC12010355369263794692672153Rat
41370298Ppa2-ps1inorganic pyrophosphatase 2, pseudogene67985657179860348Rat
41194368LOC120093500U4 spliceosomal RNA68086314280863276Rat
41346464LOC120093503U4 spliceosomal RNA6104736554104736684Rat
41372328LOC120093260uncharacterized LOC12009326069029469090296402Rat
41070124Snora32small nucleolar RNA, H/ACA box 3268528818185288298Rat
41159797LOC120103555uncharacterized LOC12010355569483906194841971Rat
41104368LOC120093427U11 spliceosomal RNA6104333711104333844Rat
41104710Snord127small nucleolar RNA, C/D box 12768310859683108680Rat
41128136Odc1-ps9ornithine decarboxylase 1, pseudogene 969931392799316759Rat
41186164LOC120093471small nucleolar RNA SNORA176112794531112794642Rat
41271388LOC120093314U6 spliceosomal RNA67757123077571335Rat
41374274LOC120103543uncharacterized LOC12010354368739378087415424Rat
41374377Arf1-ps2ADP-ribosylation factor 1, pseudogene 26109430838109431318Rat
41105615LOC120093496U4 spliceosomal RNA6113480735113480820Rat
41199209Snord45l1small nucleolar RNA, C/D box 45 like 168941468289414752Rat
41082530LOC120093308U6 spliceosomal RNA6112567734112567838Rat
41353003LOC120103578uncharacterized LOC1201035786105082756105103477Rat
41085348LOC120103595uncharacterized LOC1201035956112849326112890327Rat
41110107LOC120093287U6 spliceosomal RNA6112215144112215251Rat
41166107Gle1-ps4GLE1 RNA export mediator, pseudogene 46107150543107152648Rat
40971021LOC120093210uncharacterized LOC12009321067230649372316083Rat
40972135LOC120093296U6 spliceosomal RNA6107418656107418761Rat
40996730Gle1-ps3GLE1 RNA export mediator, pseudogene 36107225279107227328Rat
40997153Eif5-ps7eukaryotic translation initiation factor 5, pseudogene 769699679296997862Rat
40998058Odc1-ps3ornithine decarboxylase 1, pseudogene 36100007232100008388Rat
40946442LOC120093470small nucleolar RNA SNORA1769185127491851333Rat
41010932LOC120103563uncharacterized LOC12010356369886602798869636Rat
40949261LOC120103565uncharacterized LOC12010356569926055799267559Rat
40952038Ftl1-ps2ferritin light chain 1, pseudogene 26110989982110994781Rat
40952085S100a11-ps4S100 calcium binding protein A11, pseudogene 469701817797018474Rat
40977532LOC120103547uncharacterized LOC12010354769057634790580724Rat
41013569Snora50dsmall nucleolar RNA, H/ACA box 50D69587414995874265Rat
40978400LOC120103583uncharacterized LOC1201035836107060560107071738Rat
40978870LOC120093300U6 spliceosomal RNA67775521977755326Rat
40927049LOC120093488U2 spliceosomal RNA69160922691609398Rat
40955620LOC120103594uncharacterized LOC1201035946112752467112766151Rat
40956319LOC120093464small nucleolar RNA SNORA1769687980896879931Rat
40956471LOC120093469small nucleolar RNA SNORA1769651141596511548Rat
40998590LOC120093311U6 spliceosomal RNA67990149179901594Rat
40957535LOC120093486U2 spliceosomal RNA68021546380215666Rat
40958936LOC120093448small nucleolar RNA SNORA1768351670483516832Rat
40982521LOC120103556uncharacterized LOC12010355669511208995125645Rat
40934901Trnag-acctransfer RNA glycine (anticodon ACC)6106609469106609549Rat
40935991LOC120093509U6 spliceosomal RNA6104314104104314210Rat
41008008LOC120103588WW domain-binding protein 11-like6107238873107240904Rat
40963012LOC120093310U6 spliceosomal RNA67480579574805882Rat
41008056Prmt1-ps2protein arginine methyltransferase 1, pseudogene 26112302396112303446Rat
40988969LOC120093316small nucleolar RNA SNORA73 family69126560891265811Rat
40990865Ddx41l1DEAD-box helicase 41 like 16107185923107187961Rat
40967547LOC120093292U6 spliceosomal RNA67335971173359813Rat
41074541LOC120093346U1 spliceosomal RNA67220576072205923Rat
41075203LOC120103538uncharacterized LOC12010353867376066973766166Rat
41049039Pcnx4l1pecanex 4 like 169125465791258779Rat
41245801LOC120093302U1 spliceosomal RNA67221144572211608Rat
41246610LOC120103571uncharacterized LOC1201035716100904353100930460Rat
41316972LOC120093257uncharacterized LOC12009325768417249884177501Rat
41050981LOC120093454U2 spliceosomal RNA67649533176495501Rat
41319232LOC120093261uncharacterized LOC12009326169433207794334223Rat
41319468LOC120093324U1 spliceosomal RNA67222436972224532Rat
41052990LOC120103560uncharacterized LOC12010356069873266698741653Rat
41333177LOC12010357260S ribosomal protein L21-like6101527260101527772Rat
412556112310015A10RiklRIKEN cDNA 2310015A10 gene like69894309698960308Rat
41338597LOC120103552uncharacterized LOC12010355269210173992105881Rat
41151289LOC120103564uncharacterized LOC12010356469899946799001347Rat
41335350LOC120093450small nucleolar RNA SNORA1767371998573720115Rat
41032403Rps8-ps6ribosomal protein S8, pseudogene 668761771287619541Rat
41033385LOC120093510U6 spliceosomal RNA67563707175637177Rat
41033419Cbx1-ps2chromobox 1, pseudogene 269713808397147280Rat
41059572Odc1-ps11ornithine decarboxylase 1, pseudogene 116100089343100090052Rat
41059820LOC120093445small nucleolar RNA SNORA176102427215102427337Rat
41337874LOC120103580uncharacterized LOC1201035806106278424106285263Rat
41035462Snora26l1small nucleolar RNA, H/ACA box 26 like 167682355176823672Rat
41061609LOC120093487U2 spliceosomal RNA68471415384714319Rat
41226908LOC120093484small nucleolar RNA U1096112175841112175977Rat
41235353LOC120103545uncharacterized LOC12010354568795605487974828Rat
41303109LOC120093206uncharacterized LOC12009320667220087072202818Rat
41016925U3l1small nucleolar RNA U3 like 167965620179656389Rat
41236256LOC120103550uncharacterized LOC12010355069142876991442772Rat
41305281Trnav-aac44transfer RNA valine (anticodon AAC) 4467469405574694135Rat
41067375Prelid1-ps3PRELI domain containing 1, pseudogene 367661641576617250Rat
41067405Trnaa-agc24transfer RNA alanine (anticodon AGC) 2468944089989440979Rat
41237657LOC120093277U6 spliceosomal RNA6114359059114359165Rat
41020689LOC120103542uncharacterized LOC12010354268650696286535785Rat
41239514LOC120093306U6 spliceosomal RNA69609555596095658Rat
41044899LOC120103539uncharacterized LOC12010353967465429674666802Rat
41023230LOC120093444small nucleolar RNA SNORA1768369407183694202Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
11241D6Mit311767220263272202749Ratregion
11241D6Mit311767222752472227641Ratregion
11242D6Arb1738967220263372203021Ratregion
11242D6Arb1738967222725172227640Ratregion
33800D6Mit139768947314389473242Ratregion
33987D6Mit821569370131093701509Ratregion
33993D6Mit215768113288981133036Ratregion
34108D6Mgh101466104200080104200226Ratregion
34126D6Mgh41476104085867104086014Ratregion
34306D6Mgh510467346336373463459Ratregion
11347D6Wox1824267583645575836697Ratregion
33662D6Mit111869496892894969056Ratregion
37280D6Rat10414068531106185311189Ratregion
37376D6Rat8717369487683194877020Ratregion
35198D6Rat111766110547827110548006Ratregion
36813D6Rat2017667877764178777799Ratregion
36834D6Rat1751306103543936103544066Ratregion
36856D6Rat4914067450824774508389Ratregion
36990D6Rat121516109394713109394864Ratregion
37730D6Rat572226107366652107366874Ratregion
37848D6Rat10018269683399796834179Ratregion
37876D6Rat5921268231684282317040Ratregion
36518D6Rat131476102872536102872683Ratregion
36665D6Rat1417669653573096535927Ratregion
36761D6Rat6317369248448292484655Ratregion
34841D6Rat911606103829422103829584Ratregion
34886D6Rat151736100873387100873560Ratregion
35102D6Rat1617669312766793127822Ratregion
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5042254RH1293281856104919271104919456Ratregion
5043252RH1299192026112621022112621224Ratregion
5043280RH1299352066106888300106888506Ratregion
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5040292RH1281991976104718145104718342Ratregion
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5041062RH12864120769066205090662256Ratregion
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5072580RH13693119469748332497483518Ratregion
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5074966RH1383211996103328921103329120Ratregion
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5071980RH13539518969288234992882538Ratregion
5072002RH1354081936106621536106622303Ratregion
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5075442RH1385961226104705268104705390Ratregion
5075506RH1386331836103299953103300136Ratregion
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5074758RH1382011456110617849110617994Ratregion
5074964RH13832012668538805185388177Ratregion
5080602RH1416742126100860980100861192Ratregion
5080604RH1416761836103672839103673022Ratregion
5080654RH1417052096103574433103574642Ratregion
5080666RH14171118769796102397961210Ratregion
5077136RH13958118369297188792972070Ratregion
5075556RH13866215069507166195071811Ratregion
5075596RH13868512067583584075835960Ratregion
5077542RH13981619669174714491747340Ratregion
5079430RH140991067668913576689346Ratregion
5079490RH14102820369866612298666323Ratregion
5076838RH13940812969297194192972070Ratregion
5075854RH1388351216107118832107118953Ratregion
5076258RH13907112368951850989518632Ratregion
5076292RH13909115367267102172671174Ratregion
5076310RH1391011656104867627104867792Ratregion
5076900RH1394441596107068515107068674Ratregion
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5076494RH13920819969054894390549142Ratregion
5078296RH14025718069439557594395755Ratregion
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5073060RH13721322069117013991170359Ratregion
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5071520RH13512920469229682692297030Ratregion
5071700RH13523415367254527472545427Ratregion
5073904RH13770624769114402691144273Ratregion
5074078RH1378072386101369997101370235Ratregion
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5087384BQ1947242006102844459102844659Ratregion
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5090817AU0499802266103210329103210555Ratregion
5090863AU0500111996106508475106508672Ratregion
5085084AW53312415267682737776827529Ratregion
5090301AU04967013267740607077406202Ratregion
5090319AU04968022669852200398522231Ratregion
5090433AU04974713668917956089179696Ratregion
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5081432AI54790218667503402275034208Ratregion
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5085868BM39098217367536731375367486Ratregion
5085970AI10084618368961825289618435Ratregion
5084542AI17038924367588176675882010Ratregion
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5086199AA85861720669411799294118198Ratregion
5086249BE12144315369765253797652690Ratregion
5086276AI7130252006100406067100406267Ratregion
5081118RH14197520968950722989507438Ratregion
5081244RH14204918367605267276052858Ratregion
5081266RH14206121269769832197698533Ratregion
5084864AI1722029669507081995070915Ratregion
5085050UniSTS:25660864867672627876726909Ratregion
5086429BE1070211506106824919106825069Ratregion
5086667BE1072292046100328242100328446Ratregion
5081450AI55639418168821986288220561Ratregion
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5085762AI1020131746101073074101073247Ratregion
5085992AW53596417069765267197652841Ratregion
5084054AI23256412068816458588164705Ratregion
5503050Fzd610169810087498100975Ratregion
5503091ABCD45386104252008104252546Ratregion
5503168ksks2233006102008403102008703Ratregion
5503130NGB936106746842106747639Ratregion
5503607Titf1105767399843573999492Ratregion
5507539G197141446100609900100610044Ratregion
5507569G621051596106921098106921257Ratregion
5503500Cyp5131767672702176727338Ratregion
5503941Esr227369489805194899380Ratregion
5504302D1S1950E9668439398884394084Ratregion
5504348D11S369010469643212996432233Ratregion
5504616PMC316473P124767513353175133778Ratregion
5504782PMC99986P22846105120896105121180Ratregion
5505155Lrfn588667980636579807251Ratregion
5504644PMC321436P22226105122914105123136Ratregion
5504932Zbtb15669511221995112275Ratregion
5505106BP240034A10G43066105124058105124364Ratregion
5505349Six6168969163473691636425Ratregion
5505885UniSTS:4959999167583418075834271Ratregion
5505915Kcnh59369382099993821092Ratregion
5506072UniSTS:4982896668979480589794871Ratregion
5506236Satt124068558221485583701Ratregion
5506236Satt124068558221485583702Ratregion
5506521ARF6_71986668785389987854765Ratregion
5506909G478783076100463310100463617Ratregion
5507311fc10a03.x113046102616986102618290Ratregion
5507201UniSTS:22521814967400063674000785Ratregion
5506925G5409314367676591676766059Ratregion
5507095UniSTS:22454415667372162573721781Ratregion
5507241SHGC-15524830169268875992688994Ratregion
5507271fc41h02.x181768352003283520849Ratregion
5499913UniSTS:23551233168804147988041810Ratregion
5499599MARC_1069-1070:991929832:116869748265597482823Ratregion
5499655MARC_6691-6694:992007331:156669266800092668566Ratregion
5499657MARC_6693-6692:992007336:1108269266798192669063Ratregion
5500639RH1363992146103988902103989116Ratregion
5500300D14S11761626104150658104150820Ratregion
5500196SHGC-15229793767832263278323569Ratregion
5500533RH13589618368980096189801144Ratregion
5500661RH13649920967963759379637802Ratregion
5500737ODOSTSI32969315369193154020Ratregion
5500979PMC108124P19156105122435105123350Ratregion
5500360GDB:31592515969455441194554570Ratregion
5503426G1596620469893045198930655Ratregion
5501191PMC152810P120967399833673998545Ratregion
5501944MARC_17915-17916:1025020646:11306101277978101278829Ratregion
5502909Nkx2-143267399778773998219Ratregion
5502871Foxa192267513108875132010Ratregion
5502543RH1252181386105700748105700886Ratregion
Position Markers

Flank 1: (D6Mit3)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2672,202,632 - 72,202,749 (-)MAPPER
mRatBN7.2672,227,524 - 72,227,641 (+)MAPPER
Rnor_6.0675,623,277 - 75,623,393NCBI
Rnor_5.0685,163,175 - 85,163,291UniSTS
RGSC_v3.4675,049,527 - 75,049,644RGD
RGSC_v3.4675,049,528 - 75,049,644UniSTS
RGSC_v3.1675,052,653 - 75,052,770RGD
Celera671,073,450 - 71,073,566UniSTS
RH 2.0 Map6677.4RGD
Flank 2: (D6Mit12)
Rat AssemblyChrPosition (strand)Source
Rnor_5.062,916,444 - 2,916,542NCBI
RGSC_v3.463,158,401 - 3,158,498RGD
Celera614,434,730 - 14,434,828UniSTS
RH 3.4 Map666.8UniSTS
RH 3.4 Map666.8RGD
FHH x ACI Map61.69UniSTS
FHH x ACI Map61.69RGD
Cytogenetic Map6q11UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
9590290Uminl2Urine mineral level QTL 23.960.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)63878398983783989Rat
1358355Srcrt4Stress Responsive Cort QTL 46.39blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)6100364669140994061Rat
2313399Anxrr28Anxiety related response QTL 28aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)6100671796132340886Rat
1331725Bp212Blood pressure QTL 2123.52475arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)693701310128713626Rat
1331722Thshl1Thyroid stimulating hormone level QTL 111.70.0001blood thyroid-stimulating hormone amount (VT:0005119)serum thyroid stimulating hormone level (CMO:0001248)689762877106752806Rat
70176Mcsm1Mammary carcinoma susceptibility modifier QTL 1mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)658632962103632962Rat
724524Uae2Urinary albumin excretion QTL 22.70.0005urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)673463459109394713Rat
737827Hcar11Hepatocarcinoma resistance QTL 114.4liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)682523650110548006Rat
1641904Alcrsp4Alcohol response QTL 4response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)667262953112262953Rat
724513Uae14Urinary albumin excretion QTL 146.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)685311061133478515Rat
2303624Vencon5Ventilatory control QTL 54.45respiration trait (VT:0001943)minute ventilation (CMO:0000132)688047916133047916Rat
731173Uae22Urinary albumin excretion QTL 2210.1urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
2301964Bp323Blood pressure QTL 3234.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)67222764181132889Rat
9590306Scort18Serum corticosterone level QTL 182.880.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)63878398983783989Rat
1578665Bss16Bone structure and strength QTL 164.4femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)61173566972593685Rat
4889848Pur25Proteinuria QTL 25140.003urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)65672856290198260Rat
724536Uae7Urinary albumin excretion QTL 73.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)672202632130729475Rat
737976Pia24Pristane induced arthritis QTL 24joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)6112636280140994061Rat
1298087Iddm18Insulin dependent diabetes mellitus QTL 180.0001urine glucose amount (VT:0001758)percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)6116506292130245370Rat
1578668Bmd14Bone mineral density QTL 143.8femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)61173566972593685Rat
70196BpQTLcluster7Blood pressure QTL cluster 76.82arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)672202632117202632Rat
2301972Bp325Blood pressure QTL 3254.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)6172227641Rat
1300143Rf14Renal function QTL 142.92renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)63443413777102317Rat
12801411Schws8Schwannoma susceptibility QTL 8nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)694968928139968928Rat
1331797Bp213Blood pressure QTL 2133.291arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)6104085867128713626Rat
1331799Bp211Blood pressure QTL 2113.66407arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)672202632130919985Rat
71111Iddm8Insulin dependent diabetes mellitus QTL 81.90.002blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)6105156861140994061Rat
634307Bp141Blood pressure QTL 1414arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)63523041780230417Rat
634330Pia16Pristane induced arthritis QTL 163.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)645790088104200226Rat
1331779Rf38Renal function QTL 382.876kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)63207442872227641Rat
1331789Rf37Renal function QTL 373.224kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)672202632115200186Rat
8552796Vie3Viral induced encephalitis QTL 32.6brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)696833997140994061Rat
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat
4145118Mcs26Mammary carcinoma susceptibility QTL 260.0001mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)6106752656132339866Rat
1581563Uae33Urinary albumin excretion QTL 33urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)672227641130729205Rat
10054138Gmadr3Adrenal mass QTL 33.680.00045adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)685140138130140138Rat
1558641Cm47Cardiac mass QTL 472.90.001heart mass (VT:0007028)heart wet weight (CMO:0000069)657730540104085867Rat
61414Pia3Pristane induced arthritis QTL 34.5joint integrity trait (VT:0010548)post-insult time to onset of experimental arthritis (CMO:0001450)694968928137848904Rat
2293839Kiddil2Kidney dilation QTL 24.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62086642281133036Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)615107216107351382Rat
2293837Kiddil1Kidney dilation QTL 13.7kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)681132889104393926Rat
9590140Scort4Serum corticosterone level QTL 414.490.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)63878398983783989Rat
2293842Kiddil3Kidney dilation QTL 34.3kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)681132889104393926Rat
2293841Kiddil4Kidney dilation QTL 44.4kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)62086642281133036Rat
10054123Srcrt6Stress Responsive Cort QTL 62.50.0043blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)685140138130140138Rat
6893340Cm77Cardiac mass QTL 770.260.57heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)63330954981132889Rat
1576302Schws4Schwannoma susceptibility QTL 40.0078nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)683190345106747639Rat
1581550Pur8Proteinuria QTL 8urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)672227641130729205Rat
1300075Glom7Glomerulus QTL 75.60.0000002kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)671201409116201409Rat
738034Anxrr5Anxiety related response QTL 55.9exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)684130881129130881Rat
2290393Uae37Urinary albumin excretion QTL 370.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
12801471Schws9Schwannoma susceptibility QTL 9nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)661747639106747639Rat
6893332Cm74Cardiac mass QTL 740.40.64heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)657730540104085867Rat
1300076Glom8Glomerulus QTL 879e-09kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)686894788131894788Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene BpQTLcluster7

RGD Curation Notes
Note Type Note Reference
qtl_statistics_details QTL cluster is significantly associated with blood pressure for both intra-arterial and tail-cuff methods of measurement with LOD scores of 6.82 and 4.63, respectively 68932