Cm79 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Cm79 (Cardiac mass QTL 79) Rattus norvegicus

Symbol: Cm79
Name: Cardiac mass QTL 79
RGD ID: 6893344
Trait: heart mass   (VT:0007028)    
Measurement Type: heart weight to body weight ratio   (CMO:0000074)    
LOD Score: 1.5
P Value: 0.04
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21343,720,770 - 62,022,792RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01349,058,507 - 67,207,219RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01354,128,085 - 72,173,144RGDRnor5.0
RGSC_v3.41345,161,605 - 64,281,346RGDRGSC3.4
Cross Type: Not Available
Strains Crossed: WKY/Tkyo SHR/Tkyo 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait
heart mass  (IDA)

Rat Strain
SHR/Tkyo  (IEA)
WKY/Tkyo  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Identification of quantitative trait loci for cardiac hypertrophy in two different strains of the spontaneously hypertensive rat. Inomata H, etal., Hypertens Res 2005 Mar;28(3):273-81.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3561Rgs1regulator of G-protein signaling 1135601854656022889Rat
3862Timm17atranslocase of inner mitochondrial membrane 17A134673111746742604Rat
67366Pla2g4aphospholipase A2 group IVA136187781862022261Rat
70983Cacna1scalcium voltage-gated channel subunit alpha1 S134749394947564194Rat
620055Ppfia4PTPRF interacting protein alpha 4134575382745802305Rat
3882Tnnt2troponin T2, cardiac type134726732547285390Rat
2048Adora1adenosine A1 receptor134565887245695821Rat
62053Csrp1cysteine and glycine-rich protein 1134715817147179388Rat
621665Rgs2regulator of G-protein signaling 2135579974955802354Rat
620287Mybphmyosin binding protein H134565315645660893Rat
727850Kiss1KiSS-1 metastasis-suppressor134477510644780707Rat
621123Ptprvprotein tyrosine phosphatase, receptor type, V134654812546569148Rat
628835Gpr37l1G protein-coupled receptor 37-like 1134659857446605421Rat
3804Syt2synaptotagmin 2134608804646197976Rat
3821Cntn2contactin 2134394286843975973Rat
708516Ptpn7protein tyrosine phosphatase, non-receptor type 7134657090446584048Rat
628717Klhl12kelch-like family member 12134589991345933648Rat
708421Brinp3BMP/retinoic acid inducible neural specific 3135841388358846828Rat
68353Nr5a2nuclear receptor subfamily 5, group A, member 2134831363448433494Rat
621137Rnpeparginyl aminopeptidase134669945846717829Rat
727956Lhx9LIM homeobox 9135038905250409947Rat
620428Cfhcomplement factor H135151237651613829Rat
620432Myogmyogenin134574545545748044Rat
621765Tnni1troponin I1, slow skeletal type134722921747241640Rat
620911Nfascneurofascin134399722344183863Rat
1304916Optcopticin134535395445368254Rat
735051Dstykdual serine/threonine and tyrosine protein kinase134385726643905280Rat
621305Atp2b4ATPase plasma membrane Ca2+ transporting 4134515613745255292Rat
620874Chi3l1chitinase 3 like 1134564180245649787Rat
620226Prelpproline and arginine rich end leucine rich repeat protein134536840745391480Rat
1304635Atp6v1g3ATPase H+ transporting V1 subunit G3134980025649825247Rat
735074Kcnt2potassium sodium-activated channel subfamily T member 2135166412952059209Rat
1307236Lmod1leiomodin 1134675404846796186Rat
1305532Rbbp5RB binding protein 5, histone lysine methyltransferase complex subunit134391225443939107Rat
1305083Ro60Ro60, Y RNA binding protein135549951455520504Rat
3554Renrenin134479626044807491Rat
1306084Cyb5r1cytochrome b5 reductase 1134584901745855458Rat
2225Btg2BTG anti-proliferation factor 2134553188145535642Rat
1305132Klhdc8akelch domain containing 8A134373570243744277Rat
1305646Chit1chitinase 1134556584145613593Rat
1306206Kif21bkinesin family member 21B134757612947626112Rat
3451Ptprcprotein tyrosine phosphatase, receptor type, C134959619349708283Rat
1305139Zfp281zinc finger protein 281134809610348104265Rat
1306541Pik3c2bphosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta134449467344555663Rat
1307782Mett27l1methyltransferase 27 like 1134828454548285459Rat
1305414Uchl5ubiquitin C-terminal hydrolase L5135552072255556503Rat
1311611Gpr25G protein-coupled receptor 25134771281547714721Rat
1308441Dennd1bDENN domain containing 1B135054532450772922Rat
1307950Glrx2glutaredoxin 2135548187555504737Rat
1310510Cfhr1complement factor H-related 1135139558351410571Rat
1359351Mgat4e-likeMgat4 family, member E-like134583745845843215Rat
1310950Camsap2calmodulin regulated spectrin-associated protein family, member 2134772325147802606Rat
1311766Cdc73cell division cycle 73135535722655449690Rat
1311960Tmcc2transmembrane and coiled-coil domain family 2134379402943831716Rat
1310816Ube2tubiquitin-conjugating enzyme E2T134640335246413854Rat
1312041Shisa4shisa family member 4134679973546803816Rat
1359167Nuak2NUAK family kinase 2134375345443770604Rat
1306522Rgs18regulator of G-protein signaling 18135649313456516045Rat
1309306Mdm4MDM4 regulator of p53134443259644516165Rat
1309287Ppp1r12bprotein phosphatase 1, regulatory subunit 12B134619941846397108Rat
1305304Etnk2ethanolamine kinase 2134481101244829052Rat
1307111Aspmassembly factor for spindle microtubules135107484951123755Rat
1310687Elf3E74 like ETS transcription factor 3134669046046695394Rat
1308290Zc3h11azinc finger CCCH-type containing 11A134507342245113901Rat
1310650Kif14kinesin family member 14134792697547990598Rat
1310652Lad1ladinin 1134724960547263967Rat
1305482Lrrn2leucine rich repeat neuronal 2134432194444382454Rat
1310537Ipo9importin 9134681046046862694Rat
1307922Tmem9transmembrane protein 9134745848647475832Rat
1307944Ppp1r15bprotein phosphatase 1, regulatory subunit 15B134457784044585737Rat
1309947Crb1crumbs cell polarity complex component 1135080148450989261Rat
1309892Tmem183atransmembrane protein 183A134580364145820409Rat
1309674Sox13SRY-box transcription factor 13134483109744875522Rat
1307472Pkp1plakophilin 1134730960747357432Rat
1303151Adipor1adiponectin receptor 1134585946145879248Rat
1565602Kdm5blysine demethylase 5B134600158946073868Rat
1565940Arl8aADP-ribosylation factor like GTPase 8A134658584546594851Rat
1564614Cfhr4complement factor H-related 4135142259251491476Rat
1566099C13h1orf53similar to human chromosome 1 open reading frame 53135041378550418974Rat
1359331RabifRAB interacting factor134593637145948929Rat
1310502Phlda3pleckstrin homology-like domain, family A, member 3134719325047196335Rat
1311668F13bcoagulation factor XIII B chain135113090851156383Rat
1359520Ddx59DEAD-box helicase 59134787625847901214Rat
1562103Rgs13regulator of G-protein signaling 13135592229055955753Rat
1561854Ascl5achaete-scute family bHLH transcription factor 5134749179947493269Rat
1308112Mgat4eMGAT4 family, member E134598297945991793Rat
1311892Inavainnate immunity activator134766644647687383Rat
1311160Nek7NIMA-related kinase 7135002221250149374Rat
1560834Zbtb41zinc finger and BTB domain containing 41135104294851065768Rat
1564839Rpl31l9ribosomal protein L31 like 9134786001747860658Rat
1560339Lgr6leucine-rich repeat-containing G protein-coupled receptor 6134642438246544074Rat
1582969Hnrnpc-ps4heterogeneous nuclear ribonucleoprotein C, pseudogene 4135163375751635019Rat
1583292Ndufv3-ps1NADH:ubiquinone oxidoreductase subunit V3, pseudogene 1134591624045916673Rat
1562140Zc3h15-ps3zinc finger CCCH-type containing 15, pseudogene 3135631975356321734Rat
1583808Armc10-ps1armadillo repeat containing 10, pseudogene 1134852978948530780Rat
1562134Rpl9-ps26ribosomal protein L9, pseudogene 26134849660548497272Rat
1586615B3galt2Beta-1,3-galactosyltransferase 2135538940655398419Rat
1563522Lax1lymphocyte transmembrane adaptor 1134513482545145381Rat
1586467Cct3-ps2chaperonin containing Tcp1, subunit 3 (gamma), pseudogene 2134999387349995668Rat
1582913Rps15-ps17ribosomal protein S15, pseudogene 17135304260453047289Rat
1562613Snrpb2-ps1small nuclear ribonucleoprotein polypeptide B2, pseudogene 1134803068648031382Rat
1584079Cfhr2complement factor H-related 2135117582451247924Rat
1566310Golt1agolgi transport 1A134476035644773123Rat
1565548Rpl7l1-ps2ribosomal protein L7-like 1, pseudogene 2135754836957549188Rat
1564395Plekha6pleckstrin homology domain containing A6134461474044754951Rat
1562634Mroh3maestro heat-like repeat family member 3134763000447665461Rat
1565384Igfn1immunoglobulin-like and fibronectin type III domain containing 1134739561847427506Rat
1561544Tmem81transmembrane protein 81134393967743942108Rat
1590261Nav1neuron navigator 1134686697247119368Rat
1593499Arpc1b-ps1actin related protein 2/3 complex, subunit 1B, pseudogene 1135929635159299407Rat
1592306Rpl29-ps13ribosomal protein L29, pseudogene 13136122183861223353Rat
1589074Rpl11-ps12ribosomal protein L11, pseudogene 12134719397347207541Rat
1587674Fbxl14-ps2F-box and leucine-rich repeat protein 14, pseudogene 2134872039348722492Rat
1589272Hnrnpf-ps3heterogeneous nuclear ribonucleoprotein F, pseudogene 3134854206448543445Rat
1597466Hspa8-ps24heat shock protein family A (Hsp70) member 8, pseudogene 24135346617453468078Rat
1592348Dram2-ps1DNA damage regulated autophagy modulator 2, pseudogene 1136041456560415364Rat
1592636Rps7-ps10ribosomal protein S7, pseudogene 10134595072345951394Rat
619769Fmodfibromodulin134549351745504134Rat
1598307Rps2-ps31ribosomal protein S2, pseudogene 31135223102752233375Rat
1625994Vom2r-ps111vomeronasal 2 receptor, pseudogene 111135146812751468471Rat
2319172Cfhr2l1complement factor H-related 2-like 1135126263151296767Rat
2318727Psma6-ps2proteasome 20S subunit alpha 6, pseudogene 2135517292255173791Rat
2318772Rnf138-ps1ring finger protein 138, pseudogene 1135417955154189021Rat
2320695Rgs21regulator of G-protein signaling 21135623944856289290Rat
2321675Snrpesmall nuclear ribonucleoprotein polypeptide E134505098645057231Rat
2322511Tmem126a-ps2transmembrane protein 126A, pseudogene 2134419981544200394Rat
2324512Smad2-ps2SMAD family member 2, pseudogene 2136138061361382079Rat
2325425Mir181a-1microRNA 181a-1134948552749485626Rat
2325561Mir181b1microRNA 181b-1134948568849485797Rat
4888558Mir3570microRNA 3570134948550849485624Rat
7501983LOC102550525uncharacterized LOC102550525134480077244802578Rat
7514622LOC102557118uncharacterized LOC102557118134538044245384435Rat
7540956LOC102547307uncharacterized LOC102547307134789793147909758Rat
7528970LOC102553722uncharacterized LOC102553722134711749947121805Rat
7531223LOC102548579uncharacterized LOC102548579134974291349753887Rat
7516494LOC102548181uncharacterized LOC102548181134856681248598951Rat
7645761LOC102555306complement factor H-like135132597851336204Rat
7633688LOC102552406uncharacterized LOC102552406134561360645636556Rat
7636347Rpl9-ps13ribosomal protein L9, pseudogene 13135534264055347449Rat
7592623LOC102547698uncharacterized LOC102547698134815558348192151Rat
7561471LOC102551374uncharacterized LOC102551374135574418455779661Rat
7581466Gapdh-ps17Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 17135945364459485365Rat
7690852LOC102547822uncharacterized LOC102547822134827521548279720Rat
7739330LOC102552277uncharacterized LOC102552277135942587659443220Rat
7743630LOC102547022uncharacterized LOC102547022135507932155258202Rat
7674871LOC102547588uncharacterized LOC102547588134812037948137712Rat
7728603Cfhr1-ps1complement factor H-related 1, pseudogene 1135136121351385048Rat
9078385Lnc134long non-coding RNA 134134589496445899883Rat
9272792Ns5atp4-ps1NS5A transactivated protein 4, pseudogene 1134826830348268931Rat
9238526Zbed6zinc finger, BED-type containing 6134510725345113524Rat
9333559Mrpl42l1mitochondrial ribosomal protein L42 like 1134764400747644663Rat
9461626LOC103692077uncharacterized LOC103692077134492825644937589Rat
9417070Ube2d4l-ps1ubiquitin-conjugating enzyme E2D 4 like, pseudogene 1134878442248784894Rat
9219038LOC103691931uncharacterized LOC103691931135566677155685220Rat
9418531LOC103693673phosphoenolpyruvate carboxykinase [GTP], mitochondrial pseudogene136060900260610979Rat
11443633LOC108352542uncharacterized LOC108352542135030453050334723Rat
11466399LOC108352547uncharacterized LOC108352547135674709756874199Rat
11468747LOC108352538uncharacterized LOC108352538134840724648412548Rat
11474461LOC108352644uncharacterized LOC108352644135664764456651569Rat
11457516LOC108352541uncharacterized LOC108352541134941760449546358Rat
11453213LOC108352533uncharacterized LOC108352533134511636845130742Rat
11383645LOC108352617prothymosin alpha pseudogene135822663058226954Rat
11376556LOC108352643SRA stem-loop-interacting RNA-binding protein, mitochondrial pseudogene135391927553919609Rat
11377184LOC108352532uncharacterized LOC108352532134422058144222116Rat
11387688LOC108352645non-histone chromosomal protein HMG-14 pseudogene135722779857228089Rat
11389558LOC108352618endogenous retrovirus group K member 113 Gag polyprotein-like136113043561134600Rat
11392346LOC108352545uncharacterized LOC108352545135544205155468836Rat
11518999LOC108352543POU domain, class 5, transcription factor 1 pseudogene135142543951426788Rat
11506008LOC108352536uncharacterized LOC108352536134706715547070010Rat
11491242LOC108352544uncharacterized LOC108352544135514345155150865Rat
41353387LOC120096270uncharacterized LOC120096270135580120755801977Rat
41168767LOC120096465U6 spliceosomal RNA134870751048707619Rat
41277644LOC120096262uncharacterized LOC120096262135048752350511638Rat
41089389LOC120096178uncharacterized LOC120096178136095664060957991Rat
41089780LOC120096203uncharacterized LOC120096203134987376849877506Rat
41141102Mif-ps6macrophage migration inhibitory factor, pseudogene 6135192859551937627Rat
41205587Ptma-ps4prothymosin alpha, pseudogene 4135023323450236319Rat
41278710Trnak-uuu8transfer RNA lysine (anticodon UUU) 8134448230744482379Rat
41359476LOC120096190uncharacterized LOC120096190134584375445854407Rat
41384774LOC120096447U6 spliceosomal RNA135844882558448931Rat
41115546LOC120096260uncharacterized LOC120096260135015892750199965Rat
41387536Tent2-ps1terminal nucleotidyltransferase 2, pseudogene 1134971675149719879Rat
41145509LOC120096188uncharacterized LOC120096188134441333944418366Rat
41173336LOC120096403U2 spliceosomal RNA135869077658690958Rat
41208516LOC120096271uncharacterized LOC120096271135778059357877565Rat
41327582LOC120096255uncharacterized LOC120096255134696612146973821Rat
41362762LOC120096463U6 spliceosomal RNA135274260752742717Rat
41362831LOC120096438U4 spliceosomal RNA135112060051120725Rat
41177193LOC120096257uncharacterized LOC120096257134766902947676924Rat
41330862LOC120096453U6 spliceosomal RNA135357244653572552Rat
41178418LOC120096273uncharacterized LOC120096273135882140758874510Rat
41178723LOC120096460U6 spliceosomal RNA135985108759851186Rat
41342357LOC120096267uncharacterized LOC120096267135525830055264641Rat
41193295LOC120096448U6 spliceosomal RNA136140368061403786Rat
41216273Scarna18bsmall Cajal body-specific RNA 18B135552235955522493Rat
41345153LOC120096248ethanolamine kinase 2-like134481453744829052Rat
41182485LOC120096405small nucleolar RNA SNORA17136032876360328895Rat
41070118LOC120096220uncharacterized LOC120096220134768658347690468Rat
41128108LOC120096435U2 spliceosomal RNA135582745755827636Rat
41159165LOC120096256uncharacterized LOC120096256134705190547054848Rat
41220033LOC120096274uncharacterized LOC120096274135912258059156856Rat
41400277Gapdh-ps45Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 45135079289350794127Rat
41104579LOC120096251uncharacterized LOC120096251134550307245523082Rat
41197903LOC120096414U2 spliceosomal RNA135235842952358585Rat
41401176Trnak-uuu7transfer RNA lysine (anticodon UUU) 7134448191644481988Rat
41130351LOC120096253uncharacterized LOC120096253134676300046776339Rat
41294798LOC120096258uncharacterized LOC120096258134813331848143298Rat
41351842LOC120096185uncharacterized LOC120096185134375416743760164Rat
41401987LOC120096367U6 spliceosomal RNA136054177860541876Rat
41232549LOC120096420small nucleolar RNA SNORA17136144256361442671Rat
41165305LOC120096372U7 small nuclear RNA134846321548463275Rat
40945853LOC120096400small nucleolar RNA SNORA17136015142760151558Rat
40929865LOC120096464U6 spliceosomal RNA136174148761741592Rat
40930414LOC120096263uncharacterized LOC120096263135075797650759061Rat
40957481Trnap-agg34transfer RNA proline (anticodon AGG) 34134805899348059078Rat
40984291LOC120096268uncharacterized LOC120096268135552345055526544Rat
40934896LOC120096202uncharacterized LOC120096202134885424748861728Rat
40937936LOC120096418small nucleolar RNA SNORA17134886166148861776Rat
40989265LOC120096252uncharacterized LOC120096252134658088246582653Rat
40967358LOC120096187uncharacterized LOC120096187134440754344411825Rat
40993431LOC120096406small nucleolar RNA SNORA17134425476144254882Rat
40969561LOC120096259uncharacterized LOC120096259135007389450085983Rat
41075572Ndufb10-ps1NADH:ubiquinone oxidoreductase subunit B10, pseudogene 1134512119745122944Rat
41077524LOC120096186uncharacterized LOC120096186134420495044209708Rat
41245870LOC120096254uncharacterized LOC120096254134708947547097382Rat
41052885Ube2c-ps4ubiquitin-conjugating enzyme E2C, pseudogene 4134623456746243280Rat
41220427LOC120096436small nucleolar RNA U3136064539960645487Rat
41032285LOC120096272uncharacterized LOC120096272135790644658016448Rat
41337984LOC120096250uncharacterized LOC120096250134513631545140254Rat
41035098LOC120096269uncharacterized LOC120096269135570522355796688Rat
41226902LOC120096452U6 spliceosomal RNA134396455243964658Rat
41064276LOC120096266uncharacterized LOC120096266135229115852305340Rat
41016284LOC120096189uncharacterized LOC120096189134575604045759682Rat
41066519LOC120096371U1 spliceosomal RNA135211677652116948Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
11115D13Mgh7418136202237462022792Ratregion
11232D13Arb7317134480209344802410Ratregion
33935D13Mit8206134529565245295858Ratregion
33947D13Mit9152135305043453050594Ratregion
34534D13Mgh5140136105793861058078Ratregion
11375D13Arb8194134619287246193066Ratregion
11433D13Mgh15338134728269847283224Ratregion
33733D13Mit2226135987440859874610Ratregion
35997D13Rat26178135478438754784556Ratregion
36069D13Rat23166134570337045703527Ratregion
37314D13Rat101162134784107547841255Ratregion
36884D13Rat25166134504940445049579Ratregion
37154D13Rat154249134841465148414900Ratregion
37728D13Rat92208134822873048228937Ratregion
35601D13Rat24165134718100747181172Ratregion
35925D13Rat41163134372077043720931Ratregion
38240D13Rat91172134541775345417941Ratregion
40520D13Rat136136135068529050685424Ratregion
40688D13Rat124236134522835845228590Ratregion
38396D13Rat77224136093329860933518Ratregion
38518D13Rat72121134792071947920816Ratregion
38680D13Rat73246134885629348856541Ratregion
38840D13Rat105201134413959544139796Ratregion
39228D13Rat89209135347227953472488Ratregion
41967D13Arb10228136105793161058159Ratregion
41146D13Rat125235134549782145498068Ratregion
41178D13Rat126154135100457551004720Ratregion
41198D13Rat127244135338287853383120Ratregion
41268D13Rat135174134861868248618859Ratregion
42992D13Rat176216134653070646530915Ratregion
42993D13Rat150143135548109055481217Ratregion
42995D13Rat151205136182562661825824Ratregion
42996D13Rat178243135767941257679655Ratregion
42997D13Rat179249135849787258498119Ratregion
42381D13Rat188135135582979155829942Ratregion
40948D13Rat120141134421114144211288Ratregion
45047D13Got25135134388554543885678Ratregion
45048D13Wox2147134516231245162453Ratregion
45051D13Got31253134687496646875219Ratregion
45052D13Got26186134527247045272654Ratregion
45053D13Got30231134613206046132301Ratregion
45060D13Got39206135931391759314123Ratregion
60547D6Got75268135306716453067432Ratregion
60759D13Wox3277134559344745593724Ratregion
67823D13Uwm7200135954483159545011Ratregion
625786D13Got110175135775644957756624Ratregion
60035D13Got23196134378125543781451Ratregion
60037D13Got28139134536284345363002Ratregion
60039D13Got34162134970906049709222Ratregion
60040D13Got35241134943871349438955Ratregion
60041D13Got36122134907280149072923Ratregion
60042D13Got37251134777850747778756Ratregion
61294D18Mco3192135725619057256231Ratregion
66505D13Mco2274136201766562017934Ratregion
66516D13Mco8190136092898860929179Ratregion
66517D13Mco9270134602552746025790Ratregion
66668D13Mco10221134573893945739160Ratregion
66724D13Mco24400136105580161056408Ratregion
66728D13Mco26376135495485854955234Ratregion
1630066D13Got232202135628182656282028Ratregion
1627537D13Sunn1090243134521437145214612Ratregion
1627537D13Sunn1090243134521437145214612Ratregion
1627549D13Sunn1115211136093326360933474Ratregion
1627555D13Sunn1164257136123468361234940Ratregion
1582092D13Hmgc24118134670608746706205Ratregion
1628628D13Got230156135088058650880742Ratregion
1642080D13Hmgc62209134674000246740211Ratregion
1642153D13Hmgc03237134568907745689314Ratregion
1642155D13Hmgc90200134462450544624768Ratregion
1642155D13Hmgc90200134462456844624768Ratregion
1642157D13Hmgc58165134384988043850045Ratregion
1642159D13Hmgc64196134376375243763948Ratregion
1642161D13Hmgc30205134569998345700190Ratregion
1642163D13Hmgc84254134463918244639436Ratregion
1642165D13Hmgc41223134383007543830298Ratregion
1632942D13Wox16240134722778347228023Ratregion
1633242D13Got25497135505051255050611Ratregion
1640292D13Wox12135683994056840081Ratregion
1637504D13Got248132135262633052626462Ratregion
7191290D13Arb10228136105793161058159Ratregion
7206432Aspm998135111054451111542Ratregion
7206476B3galt2424135539468955395113Ratregion
5035825PMC207566P7210134574528245745492Ratregion
5036113Cfh247135159529351595835Ratregion
5039204RH127572188135138481151384999Ratregion
5039204RH127572188135138481151385000Ratregion
5039204RH127572188135141088951411077Ratregion
5037209UniSTS:205458273134574564945745922Ratregion
5037217RH127096243134575550445755747Ratregion
5028699RH7104077134752737247527449Ratregion
5026150RH131106180134728449447285225Ratregion
5026178RH131213157135549612955496286Ratregion
5028807RH142402199134669090346691102Ratregion
5031632AU047672113135591036155910474Ratregion
5034355SHGC-76196150134515803245158182Ratregion
5034371RH64613118134643924346439361Ratregion
5026508RH132481192134756373747563929Ratregion
5026562RH132689220135077189750772117Ratregion
5026594RH132810188134594946745949655Ratregion
5034634BF390479197134389675843896955Ratregion
5029377RH144564156134515647945156634Ratregion
5026796RH133563201134458542244585623Ratregion
5035068STS-M6202185134388712343887208Ratregion
5029599BF386197156135003861450038770Ratregion
5027131RH16184119134587844845878567Ratregion
5027197AI64571083135549058755490670Ratregion
5029969BF400237181134671013046710311Ratregion
5032823RH135433197134679461846794815Ratregion
5032867RH13678064134799025647990320Ratregion
5027741AB072758129135093507550935204Ratregion
5030403BE112734174134658313246583306Ratregion
5025302RH127798217134443273044432947Ratregion
502795341.MMHAP33FRF11.seq178134654467946544857Ratregion
5030715BE107718154134525472545254879Ratregion
5028117D10Mit19283135611032356110406Ratregion
5028204D1Mit103102134742887747428977Ratregion
5033599RH139414122134594848845948610Ratregion
5028384AI448359217134575544645755663Ratregion
5033685RH139735208135649335656493564Ratregion
5051128RH134456197136080872060808919Ratregion
5051286RH134546185134475472644754911Ratregion
5056493RH144410225135038988950390114Ratregion
5051623BB17643199134566191445662013Ratregion
5056937RH144666163134400186744002030Ratregion
5051791RH94660135134717863947178775Ratregion
5057438AW254008131134394189943942030Ratregion
5057458AA858656200134587874245878942Ratregion
5054505RH143263233134727554947275782Ratregion
5054559RH143294224134679976046799984Ratregion
5057716BF392626106134469463944694745Ratregion
5055039RH143570169134842256648422735Ratregion
5057996BF386425150134620830946208459Ratregion
5055845RH144035137134672798546728122Ratregion
5058122BF386633197134670363946703836Ratregion
5058138BF386676175134600035946000534Ratregion
5058162BF386712150134433123844331388Ratregion
5055623RH143907211135550089455501105Ratregion
5052887RH142331200135535719255357392Ratregion
5053031RH142414209134724138247241591Ratregion
5053045RH142422219134395954843960824Ratregion
5053087RH142446178134550370245503880Ratregion
5049944RH133772199135083664150836840Ratregion
5059208AI137140102134443627444436376Ratregion
5050198RH133918217134814252948142746Ratregion
5053497RH142683204135077259050772794Ratregion
5053543RH142709100134975623449756334Ratregion
5050744RH134233216134507186145072077Ratregion
7192896Myog185134574548845745673Ratregion
5054163RH143066157134523453845234695Ratregion
5052929RH142356151134564955845649709Ratregion
5052959RH142373166134438222344382389Ratregion
5053003RH142398167134374009543740374Ratregion
5051138RH134461195134772327347723468Ratregion
5054309RH143150211135550577555505986Ratregion
5054389RH143196156134469727144697427Ratregion
5053121RH142465144135539647255396616Ratregion
5051677RH94594161134959705749597218Ratregion
5050886RH134315203135549255255492755Ratregion
5040728RH128449192134566005545660750Ratregion
5041196RH128717180134726999447270174Ratregion
5045182RH131031200135579916155799361Ratregion
5045226RH131056182134641349946413681Ratregion
5041338RH128800210134513487445135084Ratregion
5043940RH130318194135594908455949278Ratregion
5046126RH131573154134762591547626069Ratregion
5046224RH131630180135062200650622186Ratregion
5047580RH132409183134383691743837100Ratregion
5049044RH133254214134719607947196293Ratregion
5049170RH133325206134724029747241401Ratregion
5049302RH133402188134550376545503953Ratregion
5047936RH132614187134399732143997508Ratregion
5046860RH131996213134565897445659187Ratregion
5046874RH132004187134536845745368644Ratregion
5047038RH132098180134642447246424652Ratregion
5048280RH132812205134607351546073720Ratregion
5049696RH133629185135549659655496781Ratregion
5039582RH127788184134673120546731389Ratregion
5039782RH127904220134377017043770390Ratregion
5039822RH127927207135139568751395894Ratregion
5042284RH129346228134717908047179308Ratregion
5040028RH128048217134764433647644553Ratregion
5040296RH128202212134482872744828939Ratregion
5039688RH127850216134717898547179201Ratregion
5039966RH128011215134747546847475683Ratregion
5042492RH129466214134393884943939063Ratregion
5042524RH129486184134591625745916441Ratregion
5042524RH129486184134591625745916441Ratregion
7192892Myog114134574789945748013Ratregion
5043768RH130216205135151240751512612Ratregion
5043198RH129888197134591629145916488Ratregion
5041386RH128827189135549467455494863Ratregion
5075090RH138392176134480724144807417Ratregion
5075756RH138778247134810390248104149Ratregion
5072548RH136913151134959619349596344Ratregion
5074618RH138120135134642964046429775Ratregion
5076922RH139456221134681000746810228Ratregion
5080632RH141692199134726371947263918Ratregion
5080680RH141720211134475249544752706Ratregion
5075048RH138368172134638401046384182Ratregion
5075070RH138381243134766650147666744Ratregion
5077176RH139606220134680990146810121Ratregion
5077684RH139898184134831388148314065Ratregion
5070856RH134745186134672901546729201Ratregion
5079256RH140870198136041513760415335Ratregion
5073820RH137657152134432697944327131Ratregion
5070610RH134601206134686722446867430Ratregion
5072996RH137174187134659451846594705Ratregion
5073082RH137226207134593330545933512Ratregion
5071544RH135143187134819178848191975Ratregion
5073908RH137708167134390336343903530Ratregion
5071900RH135350196134658895846589154Ratregion
5073556RH137504226134724138647241612Ratregion
5074530RH138070130134767519947675329Ratregion
5064976BI302954171134543307945433250Ratregion
5065038BE108977156134484974144849897Ratregion
5066606AU048258221135264045652640677Ratregion
5066856AU048110127136134886161348988Ratregion
5067006AU048021295134635069546350988Ratregion
5067316AU047830217134759822447598446Ratregion
5068750AU046955113134594579645945907Ratregion
5070161RH94507185134479589244796082Ratregion
5069288AU04659768135599324955993317Ratregion
5065424BF412011190134679671946796909Ratregion
5062830AW528446144134394733043947474Ratregion
5064196BI296337241134554087645541117Ratregion
5065270BE121320160134658494546585105Ratregion
5060506BE110239199134609577446095973Ratregion
5062384BE106626190134564394245644132Ratregion
5062552BE106811169134947031649470485Ratregion
5064182BE120749197134511202545112222Ratregion
5066082BE116762150134447105744471207Ratregion
5066266PMC130177P2402134717895747179359Ratregion
5064776BF405092167134580130445801471Ratregion
5087006BF389061157134773003147730188Ratregion
5087297AA819837150134553378245533932Ratregion
5082631BE119883200134471522644715426Ratregion
5086578BM386596162135990284059903002Ratregion
5087241BE117324163134435779344357956Ratregion
5087686UniSTS:141040179134566266045662839Ratregion
5082885BF390334150134739567147395821Ratregion
5088983AU048885267135017916150179428Ratregion
5089197AU049013216134915372149153935Ratregion
5083047BI281641110134394518943945299Ratregion
5083051BF390705180134433747144337651Ratregion
5089309AU049079217136143446961434686Ratregion
5089483AU049182297134795686747957164Ratregion
5089647AU049279211135320628253206493Ratregion
5081491AA998833156134477295144773108Ratregion
5081559BE117391168135039195950392127Ratregion
5081637BE117735162135549490355495065Ratregion
5081909BE118735193134565899445659187Ratregion
5085112AW531798205134561335645613561Ratregion
5090053AU049522150136189705661897206Ratregion
5085934AA866326212134669060446690816Ratregion
5080850RH141819220134420686444207054Ratregion
5084686AI23623191134585536445855455Ratregion
5082991BF390593171134625661846256789Ratregion
5086388BQ204841157134641458146414738Ratregion
5085836BE104220171134394293543943106Ratregion
5503554UniSTS:463953674134574590345746577Ratregion
5503605UniSTS:464794156135142568651425842Ratregion
5503558HRPT2__6588898135535653555357433Ratregion
5505159Lrrn2892134437982544380717Ratregion
5505210Lhx91309135039344350394752Ratregion
5505931UniSTS:4966230135605637656058065Ratregion
5506793G45403176134531345545313631Ratregion
5507185UniSTS:225072181135185106451851245Ratregion
5507035fa07h10.s11437135056771950569156Ratregion
5499719UniSTS:234220327134574552345745850Ratregion
5500256SHGC-1524061363135560639555607758Ratregion
5500063UniSTS:236515198134393765243937850Ratregion
5500633RH136376267135002407350024340Ratregion
5500661RH136499209134673128746731496Ratregion
5501077PMC133893P1952134574562845746580Ratregion
5501223PMC156147P1293134553392045534013Ratregion
5501071PMC133870P1417134549623845496655Ratregion
5503898Oct4201135142561951425820Ratregion
5505843UniSTS:495935614135539516855395782Ratregion
5502819TNNI1208134723932847240318Ratregion
6480500D13Hmgc56200134564255045642750Ratregion
6480492D13Hmgc10178134551471945514897Ratregion
128794684110178134551471945514897Ratregion
Position Markers

Flank 1: (D13Rat41)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21343,720,770 - 43,720,931 (+)MAPPER
Rnor_6.01349,058,507 - 49,058,667NCBI
Rnor_5.01354,128,085 - 54,128,245UniSTS
RGSC_v3.41345,161,605 - 45,161,766RGD
RGSC_v3.41345,161,606 - 45,161,766UniSTS
RGSC_v3.11345,175,580 - 45,175,891RGD
Celera1344,057,621 - 44,057,781UniSTS
RH 2.0 Map13307.0RGD
FHH x ACI Map1317.13RGD
Peak: (D13Arb8)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21346,192,872 - 46,193,066 (+)MAPPER
Rnor_6.01351,576,838 - 51,577,031NCBI
Rnor_5.01356,629,544 - 56,629,737UniSTS
RGSC_v3.41347,698,108 - 47,698,301UniSTS
Celera1346,519,637 - 46,519,830UniSTS
RH 3.4 Map13172.5UniSTS
SHRSP x BN Map1314.7798UniSTS
SHRSP x BN Map1314.7798RGD
Cytogenetic Map13q13UniSTS
Flank 2: (D13Mgh7)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21362,022,374 - 62,022,792 (+)MAPPER
Rnor_6.01367,206,802 - 67,207,219NCBI
Rnor_5.01372,172,727 - 72,173,144UniSTS
RGSC_v3.41364,280,928 - 64,281,346RGD
RGSC_v3.41364,280,929 - 64,281,346UniSTS
RGSC_v3.11364,295,008 - 64,295,426RGD
Celera1361,984,489 - 61,984,941UniSTS
RH 3.4 Map13292.7UniSTS
RH 3.4 Map13292.7RGD
RH 2.0 Map13410.6RGD
FHH x ACI Map1328.32RGD
Cytogenetic Map13q21UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)131101056920Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)131101056920Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131101056920Rat
61339Bp24Blood pressure QTL 240.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)13599466844807491Rat
1581554Pur11Proteinuria QTL 11urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13599483377046787Rat
1581573Uae36Urinary albumin excretion QTL 36urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13599483377046787Rat
1581570Eae17Experimental allergic encephalomyelitis QTL 174.1nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)138897350101631289Rat
7411662Foco29Food consumption QTL 2920.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)13931346554313465Rat
9589141Insul28Insulin level QTL 2810.820.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)13931346554313465Rat
2317040Aia21Adjuvant induced arthritis QTL 212.75joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)13983154154831541Rat
2317046Aia8Adjuvant induced arthritis QTL 83.9700000286102295joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)13983154154831541Rat
1300163Cardf1Cardiac cell morphology QTL 14.18aorta morphology trait (VT:0000272)artery lesion measurement (CMO:0000975)131192944945417941Rat
2302275Gluco37Glucose level QTL 373.8blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)131192944946193066Rat
631645Bp121Blood pressure QTL 1213.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131491565559915655Rat
9589164Gluco66Glucose level QTL 666.670.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)131515872260158722Rat
1331784Bp222Blood pressure QTL 2222.944arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)131769443653050594Rat
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1320605871101339738Rat
61391Bp5Blood pressure QTL 55.6arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)132230187567301875Rat
70170Eae14Experimental allergic encephalomyelitis QTL 140.0024nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)132320344868203448Rat
6893338Cm76Cardiac mass QTL 7600.99heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)132369296968692969Rat
1558644Cm45Cardiac mass QTL 453.60.002heart mass (VT:0007028)heart wet weight (CMO:0000069)132369296968692969Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1330395351101056920Rat
2301962Cm72Cardiac mass QTL 724.12heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)133124133158363171Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)133124133193395974Rat
2303563Bw89Body weight QTL 896body mass (VT:0001259)body weight (CMO:0000012)133228447177284471Rat
61340Bp25Blood pressure QTL 254.20.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133453521879535218Rat
12879477Bp401Blood pressure QTL 401arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133726209282262092Rat
61349Bp31Blood pressure QTL 315.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133737450982374509Rat
70220Bp55Blood pressure QTL 555.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133737450982374509Rat
4889861Pur29Proteinuria QTL 2913.80.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)133741558480753406Rat
1331750Bp220Blood pressure QTL 2202.98arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133741558482415584Rat
1549897Stresp12Stress response QTL 123.35stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)133843340883433408Rat
619615Bp80Blood pressure QTL 800.0354arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133975454484754544Rat
2303032Bp328Blood pressure QTL 328arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134118402245417941Rat
4145117Mcs27Mammary carcinoma susceptibility QTL 270.0001mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)134343790447841255Rat
6893344Cm79Cardiac mass QTL 791.50.04heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)134372077062022792Rat
12879436Bp395Blood pressure QTL 395arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134463918245700190Rat
12879444Bp397Blood pressure QTL 397arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134504940490049404Rat
12879472Bp399Blood pressure QTL 399arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134522835847841255Rat
12879471Bp398Blood pressure QTL 398arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134551471990514719Rat
12879441Bp396Blood pressure QTL 396arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134569998390699983Rat
1298066Bp159Blood pressure QTL 1590.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134608804691088046Rat
71119Thym2Thymus enlargement QTL 23.8thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)134619797684753113Rat
1641901Alcrsp6Alcohol response QTL 6response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)135236217197362171Rat
1354655Bp241Blood pressure QTL 2413.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1356056920101056920Rat
2303028Bp329Blood pressure QTL 329arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)135849787273485113Rat
724564Uae11Urinary albumin excretion QTL 115.7urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)135949252277046890Rat
738026Lnnr5Liver neoplastic nodule remodeling QTL 53.29liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)135987440885581182Rat
12879475Bp400Blood pressure QTL 400arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1361825626106807694Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general software used: MAPMAKER/QTL 1.1 1554311
qtl_general number of animals used: 151 F2 males 1554311