Cm79 QTL Report (Rattus norvegicus) - Rat Genome Database
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QTL: Cm79 (Cardiac mass QTL 79) Rattus norvegicus

Symbol: Cm79
Name: Cardiac mass QTL 79
RGD ID: 6893344
Trait: heart mass   (VT:0007028)    
Measurement Type: heart weight to body weight ratio   (CMO:0000074)    
LOD Score: 1.5
P Value: 0.04
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.01349,058,507 - 67,207,219RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01354,128,085 - 72,173,144RGDRnor5.0
RGSC_v3.41345,161,605 - 64,281,346RGDRGSC3.4
Cross Type: Not Available
Strains Crossed: WKY/Tkyo SHR/Tkyo 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait
heart mass  (IDA)

Rat Strain
SHR/Tkyo  (IEA)
WKY/Tkyo  (IEA)

References

References - curated
1. Inomata H, etal., Hypertens Res 2005 Mar;28(3):273-81.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1305132Klhdc8akelch domain containing 8A134907464449082729Rat
1359167Nuak2NUAK family kinase 2134909230649109055Rat
1311960Tmcc2transmembrane and coiled-coil domain family 2134913268549169771Rat
735051Dstykdual serine/threonine and tyrosine protein kinase134919532549243327Rat
1305532Rbbp5RB binding protein 5, histone lysine methyltransferase complex subunit134925030149277152Rat
1561544Tmem81transmembrane protein 81134927772249280153Rat
3821Cntn2contactin 2134928091349314061Rat
620911Nfascneurofascin134933540749522474Rat
2322511LOC100360239hypothetical LOC100360239134953841449538993Rat
11377184LOC108352532uncharacterized LOC108352532134954542249560734Rat
1305482Lrrn2leucine rich repeat neuronal 2134966035649730275Rat
1309306Mdm4MDM4 regulator of p53134978677649828780Rat
7603292LOC102549273uncharacterized LOC102549273134980680349809400Rat
1306541Pik3c2bphosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta134984893949909404Rat
9296464LOC103691892uncharacterized LOC103691892134986706249871201Rat
1307944Ppp1r15bprotein phosphatase 1, regulatory subunit 15B134993315549940961Rat
621305Atp2b4ATPase plasma membrane Ca2+ transporting 4135009164450153808Rat
1563522Lax1lymphocyte transmembrane adaptor 1135016456350175119Rat
11453213LOC108352533uncharacterized LOC108352533135018574950193563Rat
1583809LOC363987similar to NADH-ubiquinone oxidoreductase PDSW subunit (Complex I-PDSW) (CI-PDSW)135018793550188463Rat
1308290Zc3h11azinc finger CCCH-type containing 11A135019604250234862Rat
9238526Zbed6zinc finger, BED-type containing 6135019614350211670Rat
1561566LOC498231LRRGT00144135024247850261438Rat
2321675Snrpesmall nuclear ribonucleoprotein polypeptide E135025270750258951Rat
9461626LOC103692077uncharacterized LOC103692077135037175850380755Rat
1309674Sox13SRY-box transcription factor 13135043470250479118Rat
1305304Etnk2ethanolamine kinase 2135048117850498991Rat
3554Renrenin135050272450513953Rat
7501983LOC102550525uncharacterized LOC102550525135050768550509232Rat
727850Kiss1KiSS-1 metastasis-suppressor135052950650537603Rat
1566310Golt1agolgi transport 1A135053211650550029Rat
1564395Plekha6pleckstrin homology domain containing A6135055545450582236Rat
1304916Optcopticin135073550950748908Rat
620226Prelpproline and arginine rich end leucine rich repeat protein135074952650773934Rat
7514622LOC102557118uncharacterized LOC102557118135076145250764851Rat
619769Fmodfibromodulin135087488650885503Rat
9201554LOC103691904uncharacterized LOC103691904135090922350911243Rat
2225Btg2BTG anti-proliferation factor 2135091318550916944Rat
1305646Chit1chitinase 1135094702050994644Rat
7633688LOC102552406uncharacterized LOC102552406135100866951018293Rat
620874Chi3l1chitinase 3 like 1135102284451030797Rat
620287Mybphmyosin binding protein H135103422851041903Rat
2048Adora1adenosine A1 receptor135104211151076913Rat
9270250LOC103691905uncharacterized LOC103691905135112007951122225Rat
620432Myogmyogenin135112645951129048Rat
620055Ppfia4PTPRF interacting protein alpha 4135113483151183321Rat
1309892Tmem183atransmembrane protein 183A135118464751201401Rat
1359351LOC289035similar to UDP-N-acetylglucosamine:a-1,3-D-mannoside beta-1,4-N-acetylgluco135121842851225602Rat
7562072LOC102552665uncharacterized LOC102552665135122507451228447Rat
1306084Cyb5r1cytochrome b5 reductase 1135122969751236447Rat
1303151Adipor1adiponectin receptor 1135124047051260233Rat
9078385Lnc134long non-coding RNA 134135127594751280865Rat
628717Klhl12kelch-like family member 12135128093351314753Rat
1583292Ndufv3-ps1NADH dehydrogenase (ubiquinone) flavoprotein 3, pseudogene 1135129722351297656Rat
1359331RabifRAB interacting factor135131747651330536Rat
1592636LOC685511similar to 40S ribosomal protein S7 (S8)135133235851333002Rat
11467019LOC108352535uncharacterized LOC108352535135135246951355487Rat
1308112Mgat4eMGAT4 family, member E135136480351382702Rat
9215774LOC103691910uncharacterized LOC103691910135137113951372927Rat
9213668LOC103691912uncharacterized LOC103691912135138129951382848Rat
1565602Kdm5blysine demethylase 5B135138437151455392Rat
3804Syt2synaptotagmin 2135156924851577824Rat
1309287Ppp1r12bprotein phosphatase 1, regulatory subunit 12B135158360351784641Rat
7737183LOC102553256ubiquitin-conjugating enzyme E2 C-like135162212251624147Rat
1310816Ube2tubiquitin-conjugating enzyme E2T135179087751801379Rat
1560339Lgr6leucine-rich repeat-containing G protein-coupled receptor 6135181190451931193Rat
621123Ptprvprotein tyrosine phosphatase, receptor type, V135193523951956262Rat
708516Ptpn7protein tyrosine phosphatase, non-receptor type 7135195802351971431Rat
1565940Arl8aADP-ribosylation factor like GTPase 8A135197297451981976Rat
628835Gpr37l1G protein-coupled receptor 37-like 1135198569851992547Rat
1310687Elf3E74 like ETS transcription factor 3135208387352088798Rat
621137Rnpeparginyl aminopeptidase135209286352124006Rat
3862Timm17atranslocase of inner mitochondrial membrane 17A135212464152136127Rat
1307236Lmod1leiomodin 1135214709952189835Rat
1312041Shisa4shisa family member 4135219398952197205Rat
1310537Ipo9importin 9135220338452256196Rat
7539150LOC102553639uncharacterized LOC102553639135225968552266982Rat
1590261Nav1neuron navigator 1135226047452515016Rat
7586102LOC102553951uncharacterized LOC102553951135235962852367485Rat
11506008LOC108352536uncharacterized LOC108352536135246087252467679Rat
7528970LOC102553722uncharacterized LOC102553722135251268752518742Rat
62053Csrp1cysteine and glycine-rich protein 1135255384352575054Rat
9252026LOC103691921uncharacterized LOC103691921135257610952584807Rat
11459163LOC108352537uncharacterized LOC108352537135258737652589240Rat
1310502Phlda3pleckstrin homology-like domain, family A, member 3135258891752592002Rat
1589074LOC685812similar to ribosomal protein L11135259763552603205Rat
621765Tnni1troponin I1, slow skeletal type135262485652637297Rat
1310652Lad1ladinin 1135264525752659619Rat
3882Tnnt2troponin T2, cardiac type135266297452680992Rat
1307472Pkp1plakophilin 1135270517452753089Rat
1565384Igfn1immunoglobulin-like and fibronectin type III domain containing 1135279118852823037Rat
7646811LOC102555007immunoglobulin-like and fibronectin type III domain-containing protein 1-like135282092852823299Rat
1307922Tmem9transmembrane protein 9135285403152871300Rat
1561854Ascl5achaete-scute family bHLH transcription factor 5135288705552888603Rat
70983Cacna1scalcium voltage-gated channel subunit alpha1 S135288957052964558Rat
1306206Kif21bkinesin family member 21B135297650553026750Rat
1562634LOC498236LRRGT00186135303059653087386Rat
9333559LOC10369192228S ribosomal protein L42, mitochondrial135306744053067949Rat
1311892Inavainnate immunity activator135308843853108713Rat
1311611Gpr25G protein-coupled receptor 25135313581553139180Rat
1310950Camsap2calmodulin regulated spectrin-associated protein family, member 2135314571253225349Rat
1564839RGD1564839similar to ribosomal protein L31135328384053284281Rat
1359520Ddx59DEAD-box helicase 59135329987253324824Rat
7540956LOC102547307uncharacterized LOC102547307135332139253333118Rat
1310650Kif14kinesin family member 14135335007353421992Rat
9288424LOC10369192360S ribosomal protein L31 pseudogene135339799553399251Rat
1562613RGD1562613similar to U2 small nuclear ribonucleoprotein B135346017753460902Rat
1305139Zfp281zinc finger protein 281135353108053534399Rat
7674871LOC102547588uncharacterized LOC102547588135355514453572396Rat
7592623LOC102547698uncharacterized LOC102547698135362137453628484Rat
9272792LOC103693671uncharacterized protein C1orf43 homolog pseudogene135370518353707594Rat
7690852LOC102547822uncharacterized LOC102547822135371187853716296Rat
1307782RGD1307782similar to Williams-Beuren syndrome critical region protein 27135372099253722037Rat
68353Nr5a2nuclear receptor subfamily 5, group A, member 2135375047053870288Rat
11468747LOC108352538uncharacterized LOC108352538135384460153850856Rat
1562134RGD1562134similar to 60S ribosomal protein L9135393334353933932Rat
1583808LOC363996similar to SVH protein135396688953967879Rat
1589272LOC683209similar to heterogeneous nuclear ribonucleoprotein F135397899553980396Rat
7516494LOC102548181uncharacterized LOC102548181135400540954036603Rat
1587674LOC688505similar to F-box and leucine-rich repeat protein 14135416690154172818Rat
9417070LOC103692078ubiquitin-conjugating enzyme E2 D4-like135423811854238590Rat
11381827LOC108352539uncharacterized LOC108352539135457360754579898Rat
11499904LOC108352540uncharacterized LOC108352540135474840654799917Rat
11457516LOC108352541uncharacterized LOC108352541135488155054918267Rat
4888558Mir3570microRNA 3570135495272354952839Rat
2325425Mir181a-1microRNA 181a-1135495274254952841Rat
2325561Mir181b1microRNA 181b-1135495290354953012Rat
3451Ptprcprotein tyrosine phosphatase, receptor type, C135506156155174150Rat
7531223LOC102548579uncharacterized LOC102548579135520200055219397Rat
1304635Atp6v1g3ATPase H+ transporting V1 subunit G3135526579455288651Rat
1586467Cct3-ps2chaperonin containing Tcp1, subunit 3 (gamma), pseudogene 2135545882655460621Rat
1311160Nek7NIMA-related kinase 7135548575955617534Rat
9410925LOC103691924uncharacterized LOC103691924135560496655608822Rat
1565063RGD1565063RGD1565063135570102255701429Rat
11443633LOC108352542uncharacterized LOC108352542135577840755805721Rat
727956Lhx9LIM homeobox 9135585454355879305Rat
1566099RGD1566099similar to novel protein135588136655886554Rat
7717561LOC102548647uncharacterized LOC102548647135595394155981554Rat
1308441Dennd1bDENN domain containing 1B135601581356242041Rat
1309947Crb1crumbs cell polarity complex component 1135627051956462893Rat
1560834Zbtb41zinc finger and BTB domain containing 41135651323156542444Rat
1307111Aspmassembly factor for spindle microtubules135654602156591793Rat
1311668F13bcoagulation factor XIII B chain135659889156623132Rat
1584079Cfhr2complement factor H-related 2135664165756713305Rat
2319172LOC100361907complement factor H-related protein B135672991056764060Rat
7645761LOC102555306complement factor H-like135679265256803359Rat
7728603LOC102554977complement factor H-related protein 1-like135683008356851658Rat
1310510Cfhr1complement factor H-related 1135686266656877650Rat
1564614RGD1564614similar to complement factor H-related protein135688966956958549Rat
11518999LOC108352543POU domain, class 5, transcription factor 1 pseudogene135689044156893756Rat
2321289LOC100360869POU class 5 homeobox 1-like135689251656893764Rat
1625994Vom2r-ps111vomeronasal 2 receptor, pseudogene 111135693520056935544Rat
620428Cfhcomplement factor H135697915557080540Rat
1582969LOC688938similar to heterogeneous nuclear ribonucleoprotein C135710046757101729Rat
735074Kcnt2potassium sodium-activated channel subfamily T member 2135713085557520263Rat
6497955LOC100910550macrophage migration inhibitory factor-like135739666557397287Rat
1598307LOC364000similar to 40S ribosomal protein S2135770456757705443Rat
1582913LOC688994similar to 40S ribosomal protein S15 (RIG protein)135852919258533872Rat
6496484LOC100910764histone deacetylase 1-like135864928758650176Rat
11376556LOC108352643SRA stem-loop-interacting RNA-binding protein, mitochondrial pseudogene135898911958989453Rat
2318772LOC100362111ring finger protein 138135925025059259695Rat
9091073LOC103693672uncharacterized LOC103693672135978680259789570Rat
7743630LOC102547022uncharacterized LOC102547022136014985960157052Rat
11491242LOC108352544uncharacterized LOC108352544136019243860193214Rat
2318727LOC100362156proteasome alpha 6 subunit136022007460221010Rat
7636347LOC10254930260S ribosomal protein L9-like136038929060390524Rat
1311766Cdc73cell division cycle 73136040377160496511Rat
1586615B3galt2Beta-1,3-galactosyltransferase 2136043594660444957Rat
11392346LOC108352545uncharacterized LOC108352545136049805260512402Rat
1307950Glrx2glutaredoxin 2136052905760552115Rat
1305083Ro60Ro60, Y RNA binding protein136054689260567882Rat
1305414Uchl5ubiquitin C-terminal hydrolase L5136056810260603812Rat
7644303LOC102549528uncharacterized LOC102549528136056831160572099Rat
9219038LOC103691931uncharacterized LOC103691931136071447760729503Rat
7561471LOC102551374uncharacterized LOC102551374136081822360828994Rat
621665Rgs2regulator of G-protein signaling 2136084645860849061Rat
9429724LOC103691934uncharacterized LOC103691934136087837260908972Rat
9093567LOC103691936uncharacterized LOC103691936136090938760925031Rat
1562103Rgs13regulator of G-protein signaling 13136097017261004260Rat
3561Rgs1regulator of G-protein signaling 1136106619661070772Rat
2320695Rgs21regulator of G-protein signaling 21136128642561310742Rat
11507220LOC108352546uncharacterized LOC108352546136130104461317700Rat
1562140RGD1562140similar to brain Zn-finger protein136136336461365366Rat
1306522Rgs18regulator of G-protein signaling 18136156438161591139Rat
11474461LOC108352644uncharacterized LOC108352644136171786061721765Rat
11466399LOC108352547uncharacterized LOC108352547136184997261940421Rat
11445940LOC108352548uncharacterized LOC108352548136199496562007791Rat
11387688LOC108352645non-histone chromosomal protein HMG-14 pseudogene136229425462294545Rat
1565548RGD1565548similar to ribosomal protein L7-like 1136266066462661483Rat
7664260LOC102552051uncharacterized LOC102552051136302508763049942Rat
11383645LOC108352617prothymosin alpha pseudogene136334097363341297Rat
708421Brinp3BMP/retinoic acid inducible neural specific 3136352648663959390Rat
1593499LOC689365similar to Actin-related protein 2/3 complex subunit 1B (ARP2/3 complex 41 kDa subunit) (p41-ARC)136441863864421694Rat
7739330LOC102552277uncharacterized LOC102552277136454889564566180Rat
7581466LOC102552334uncharacterized LOC102552334136460485664616811Rat
1592348LOC689412similar to CG4025-PA136555067365551379Rat
9418531LOC103693673phosphoenolpyruvate carboxykinase [GTP], mitochondrial pseudogene136574974865751678Rat
11389558LOC108352618endogenous retrovirus group K member 113 Gag polyprotein-like136628185566286312Rat
11443645LOC10835264660S ribosomal protein L29-like136636234566365136Rat
1592306LOC689456similar to 60S ribosomal protein L29 (P23)136637400566375161Rat
2324512LOC100362542MAD homolog 2136646839466543361Rat
67366Pla2g4aphospholipase A2 group IVA136706225267206688Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
11115D13Mgh7418136720680267207219Ratregion
11232D13Arb7317135050780550508121Ratregion
33935D13Mit8206135067699950677204Ratregion
33947D13Mit9152135853701858537177Ratregion
34534D13Mgh5140136620449166204630Ratregion
11375D13Arb8194135157683851577031Ratregion
11433D13Mgh15338135267830252678826Ratregion
33733D13Mit2226136500824565008446Ratregion
35997D13Rat26178135984626459846432Ratregion
36069D13Rat23166135108437451084530Ratregion
37314D13Rat101162135326469853264877Ratregion
36884D13Rat25166135026035750260531Ratregion
37154D13Rat154249135385149853851746Ratregion
37728D13Rat92208135366601053666218Ratregion
36588D13Rat27159136568263765682798Ratregion
35601D13Rat24165135257667452576838Ratregion
35925D13Rat41163134905850749058667Ratregion
38240D13Rat91172135079947850799665Ratregion
40520D13Rat136136135615237356152504Ratregion
40688D13Rat124236135060922850609459Ratregion
38396D13Rat77224136607560866075827Ratregion
38518D13Rat72121135334354853343644Ratregion
38680D13Rat73246135431168354311928Ratregion
38840D13Rat105201134947806749478267Ratregion
41967D13Arb10228136620448466204711Ratregion
41146D13Rat125235135087919150879437Ratregion
41178D13Rat126154135647791956478063Ratregion
41268D13Rat135174135405936954059545Ratregion
42992D13Rat176216135191782951918037Ratregion
42993D13Rat150143136052827660528402Ratregion
42995D13Rat151205136697177866971975Ratregion
42996D13Rat178243136278889762789139Ratregion
42997D13Rat179249136361128363611529Ratregion
42381D13Rat188135136087642860876578Ratregion
40948D13Rat120141134954973949549883Ratregion
45047D13Got25135134922359549223727Ratregion
45048D13Wox2147135014749450147634Ratregion
45051D13Got31253135226847152268723Ratregion
45052D13Got26186135065358950653772Ratregion
45053D13Got30231135151369351513933Ratregion
45054D13Got2294134972057549720682Ratregion
45060D13Got39206136443620564436410Ratregion
60547D6Got75268135855403058554297Ratregion
60759D13Wox3277135097447550974751Ratregion
67823D13Uwm7200136467590264676081Ratregion
625786D13Got110175136286601062866184Ratregion
60035D13Got23196134911992149120116Ratregion
60037D13Got28139135074396350744121Ratregion
60039D13Got34162135517455055174711Ratregion
60040D13Got35241135490613754906378Ratregion
60041D13Got36122135453494254535063Ratregion
60042D13Got37251135320121353201461Ratregion
66505D13Mco2274136720209367202361Ratregion
66516D13Mco8190136607013966070329Ratregion
66517D13Mco9270135140737451407636Ratregion
66668D13Mco10221135111994651120164Ratregion
66724D13Mco24400136620235466202960Ratregion
66728D13Mco26376136001879160019166Ratregion
1630066D13Got232202136132556061325761Ratregion
1582024D13Hmgc23201135118192251182122Ratregion
1627537D13Sunn1090243135059574150595983Ratregion
1627537D13Sunn1090243135009528050095522Ratregion
1627549D13Sunn1115211136607557366075783Ratregion
1627555D13Sunn1164257136638745666387712Ratregion
1582092D13Hmgc24118135209949652099613Ratregion
1628628D13Got230156135634984456349999Ratregion
1642080D13Hmgc62209135213352652133734Ratregion
1642153D13Hmgc03237135107008351070319Ratregion
1642155D13Hmgc90200134998009649980295Ratregion
1642155D13Hmgc90200134998001349980295Ratregion
1642157D13Hmgc58165134918794049188104Ratregion
1642159D13Hmgc64196134910220549102400Ratregion
1642161D13Hmgc30205135108098951081193Ratregion
1642163D13Hmgc84254134999470849994961Ratregion
1642165D13Hmgc41223134916813149168353Ratregion
1632942D13Wox16240135262344652623685Ratregion
1633242D13Got25497136011505560115153Ratregion
1640292D13Wox12136190866261908802Ratregion
1637504D13Got248132135810161058101741Ratregion
7191290D13Arb10228136620448466204711Ratregion
7206432Aspm998135657858356579580Ratregion
7206476B3galt2424136044122860441651Ratregion
5035825PMC207566P7210135112628751126496Ratregion
5036113Cfh247135706201157062552Ratregion
5039204RH127572188135687796956878156Ratregion
5039204RH127572188135685189556852082Ratregion
5037209UniSTS:205458273135112665451126926Ratregion
5037217RH127096243135113650951136751Ratregion
5028699RH7104077135292165652921732Ratregion
5026150RH131106180135268009752680827Ratregion
5026178RH131213157136054350860543664Ratregion
5028807RH142402199135208431352084511Ratregion
5031632AU047672113136095920360959316Ratregion
5034355SHGC-76196150135015176550151914Ratregion
5034371RH64613118135182647551826592Ratregion
5026508RH132481192135296410252964293Ratregion
5026562RH132689220135624101756241236Ratregion
5026594RH132810188135133107551331262Ratregion
5034634BF390479197134923480749235003Ratregion
5029377RH144564156135015331350153467Ratregion
5026796RH133563201134994064749940847Ratregion
5035068STS-M6202185134922517349225257Ratregion
5029599BF386197156135550221755502372Ratregion
5027131RH16184119135125943451259552Ratregion
5027197AI64571083136053777360537855Ratregion
5029969BF400237181135210353952103719Ratregion
5032823RH135433197135218812252188318Ratregion
5032867RH13678064135342165153421714Ratregion
5027741AB072758129135640814656408274Ratregion
5030403BE112734174135197026451970437Ratregion
5025302RH127798217134978691149787127Ratregion
502795341.MMHAP33FRF11.seq178135193179651931973Ratregion
5030715BE107718154135063559350635746Ratregion
5028117D10Mit19283136115646561156547Ratregion
5028204D1Mit103102135282444652824547Ratregion
5033599RH139414122135133009651330217Ratregion
5028384AI448359217135113645151136667Ratregion
5033685RH139735208136156460461564811Ratregion
5051128RH134456197136595242365952621Ratregion
5051286RH134546185135055549450555678Ratregion
5056493RH144410225135585765655857880Ratregion
5051623BB17643199135104292551043023Ratregion
5056937RH144666163134934005249340214Ratregion
5051791RH94660135135257430652574441Ratregion
5057438AW254008131134927994549280075Ratregion
5057458AA858656200135125972851259927Ratregion
5054505RH143263233135267119652671428Ratregion
5054559RH143294224135219326352193486Ratregion
5057716BF392626106135004982250049927Ratregion
5055039RH143570169135385941353859581Ratregion
5057996BF386425150135159226251592411Ratregion
5055845RH144035137135212151052121646Ratregion
5058122BF386633197135209704852097244Ratregion
5058138BF386676175135138221451382388Ratregion
5058162BF386712150134967362149673770Ratregion
5055623RH143907211136054827360548483Ratregion
5052887RH142331200136040373860403937Ratregion
5053031RH142414209135263704152637249Ratregion
5053045RH142422219134929760349298877Ratregion
5053087RH142446178135088507250885249Ratregion
5049944RH133772199135630585556306053Ratregion
5059208AI137140102134979045349790554Ratregion
5050198RH133918217135357752153577737Ratregion
5053497RH142683204135624171056241913Ratregion
5053543RH142709100135522175555221854Ratregion
5050744RH134233216135023786150238076Ratregion
7192896Myog185135112649351126677Ratregion
5054163RH143066157135061540850615564Ratregion
5052929RH142356151135103056951030719Ratregion
5052959RH142373166134973004549730210Ratregion
5053003RH142398167134907854849078826Ratregion
5051138RH134461195135314586553146059Ratregion
5054309RH143150211136055315460553364Ratregion
5054389RH143196156135005246250052617Ratregion
5053121RH142465144136044301160443154Ratregion
5051677RH94594161135506242655062586Ratregion
5050886RH134315203136053973860539940Ratregion
5040728RH128449192135104106651041760Ratregion
5041196RH128717180135266564752665826Ratregion
5045182RH131031200136084587160846070Ratregion
5045226RH131056182135180102551801206Ratregion
5041338RH128800210135017486050175069Ratregion
5043940RH130318194136099716760997360Ratregion
5046126RH131573154135302655453026707Ratregion
5046224RH131630180135609243056092609Ratregion
5047580RH132409183134917497349175155Ratregion
5049044RH133254214135259174752591960Ratregion
5049170RH133325206135263595652637059Ratregion
5049302RH133402188135088513550885322Ratregion
5047936RH132614187134933550649335692Ratregion
5046860RH131996213135103998551040197Ratregion
5046874RH132004187135074957750749763Ratregion
5047038RH132098180135181199551812174Ratregion
5048280RH132812205135145503251455236Ratregion
5049696RH133629185136054397560544159Ratregion
5039582RH127788184135212473052124913Ratregion
5039782RH127904220134910862249108841Ratregion
5039822RH127927207135686277156862977Ratregion
5042284RH129346228135257474752574974Ratregion
5040028RH128048217135306770353067919Ratregion
5040296RH128202212135048127650481487Ratregion
5039688RH127850216135257465252574867Ratregion
5039966RH128011215135287093752871151Ratregion
5042492RH129466214134927689549277108Ratregion
5042524RH129486184135129724151297424Ratregion
7192892Myog114135112890451129017Ratregion
5043768RH130216205135697918756979391Ratregion
5043198RH129888197135129727551297471Ratregion
5041386RH128827189136054205360542241Ratregion
5075090RH138392176135050279850502973Ratregion
5075756RH138778247135353881353539059Ratregion
5072548RH136913151135506156255061712Ratregion
5074618RH138120135135181716251817296Ratregion
5076922RH139456221135220351152203731Ratregion
5080632RH141692199135265937252659570Ratregion
5080680RH141720211135055769950557909Ratregion
5075048RH138368172135176993851770109Ratregion
5075070RH138381243135308849453088736Ratregion
5077176RH139606220135220340552203624Ratregion
5077684RH139898184135375071853750901Ratregion
5070856RH134745186135212254052122725Ratregion
5079256RH140870198136555124665551443Ratregion
5073820RH137657152134966539449665545Ratregion
5070610RH134601206135226072752260932Ratregion
5072996RH137174187135198164451981830Ratregion
5073082RH137226207135131441151314617Ratregion
5071544RH135143187135362812253628308Ratregion
5073908RH137708167134924141249241578Ratregion
5071900RH135350196135197608751976282Ratregion
5073556RH137504226135263704552637270Ratregion
5074530RH138070130135309719253097321Ratregion
5064976BI302954171135081480450814974Ratregion
5065038BE108977156135046032250460477Ratregion
5066606AU048258221135811531758115537Ratregion
5066856AU048110127136651037366510499Ratregion
5067006AU048021295135173662551736915Ratregion
5067316AU047830217135299858752998806Ratregion
5068750AU046955113135132740451327514Ratregion
5068870AU046875102135003046150030568Ratregion
5070161RH94507185135051413150514320Ratregion
5069288AU04659768136104090161040968Ratregion
5063486BF3989200135500163155002252Ratregion
5065424BF412011190135219022352190412Ratregion
5062830AW528446144134928537649285519Ratregion
5064196BI296337241135092217550922415Ratregion
5065270BE121320160135197207551972234Ratregion
5060506BE110239199135147729051477488Ratregion
5062384BE106626190135102498351025172Ratregion
5062552BE106811169135493753254937700Ratregion
5064182BE120749197135019772150197917Ratregion
5066082BE116762150134982556949825718Ratregion
5066266PMC130177P2402135257462452575025Ratregion
5064776BF405092167135118230651182472Ratregion
5087006BF389061157135315274753152903Ratregion
5087297AA819837150135091508750915236Ratregion
5082631BE119883200135007067450070873Ratregion
5086578BM386596162136504231865042479Ratregion
5087241BE117324163134970588949706051Ratregion
5087686UniSTS:141040179135104367151043849Ratregion
5082885BF390334150135279124252791391Ratregion
5088983AU048885267135564817855648444Ratregion
5089197AU049013216135461555254615765Ratregion
5083047BI281641110134928323549283344Ratregion
5083051BF390705180134967985549680034Ratregion
5089309AU049079217136659581166596027Ratregion
5089483AU049182297135338130453381598Ratregion
5089647AU049279211135869581358696023Ratregion
5081491AA998833156135053729450537450Ratregion
5081559BE117391168135585972655859893Ratregion
5081637BE117735162136054228260542443Ratregion
5081909BE118735193135104000551040197Ratregion
5085112AW531798205135099440850994612Ratregion
5090053AU049522150136708149067081639Ratregion
5085934AA866326212135208401452084225Ratregion
5080850RH141819220134954546249545651Ratregion
5084686AI23623191135123635451236444Ratregion
5082991BF390593171135164091951641089Ratregion
5086388BQ204841157135180210751802263Ratregion
5085836BE104220171134928098149281151Ratregion
5503554UniSTS:463953674135112690851127581Ratregion
5503605UniSTS:464794156135689276456892919Ratregion
5503558HRPT2__6588898136040308160403978Ratregion
5505159Lrrn2892134972764749728538Ratregion
5505210Lhx91309135586120855862516Ratregion
5505931UniSTS:4966230136110364861105336Ratregion
5506793G45403176135069480150694976Ratregion
5507185UniSTS:225072181135731640657316586Ratregion
5507035fa07h10.s11437135603768556039121Ratregion
5499719UniSTS:234220327135112652851126854Ratregion
5500256SHGC-1524061363136065181260653174Ratregion
5500063UniSTS:236515198134927569849275895Ratregion
5500633RH136376267135548762155487887Ratregion
5500661RH136499209135212481252125020Ratregion
5500775stSG6167450135870608158706970Ratregion
5501077PMC133893P1952135112663351127584Ratregion
5501223PMC156147P1293135091522550915317Ratregion
5501071PMC133870P1417135087760850878024Ratregion
5503898Oct4201135689269756892897Ratregion
5505843UniSTS:495935614136044170760442320Ratregion
5502819TNNI1208135263498752635976Ratregion
6480500D13Hmgc56200135102359151023790Ratregion
6480492D13Hmgc10178135089609150896268Ratregion
12832756rs1069358350135091800950918009Ratregion
12859027rs1981993230135089796450897964Ratregion
128794684110178135089609150896268Ratregion
Position Markers

Flank 1: (D13Rat41)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01349,058,507 - 49,058,667NCBI
Rnor_5.01354,128,085 - 54,128,245UniSTS
RGSC_v3.41345,161,605 - 45,161,766RGD
RGSC_v3.41345,161,606 - 45,161,766UniSTS
RGSC_v3.11345,175,580 - 45,175,891RGD
Celera1344,057,621 - 44,057,781UniSTS
RH 2.0 Map13307.0RGD
FHH x ACI Map1317.13RGD
Peak: (D13Arb8)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01351,576,838 - 51,577,031NCBI
Rnor_5.01356,629,544 - 56,629,737UniSTS
RGSC_v3.41347,698,108 - 47,698,301UniSTS
Celera1346,519,637 - 46,519,830UniSTS
RH 3.4 Map13172.5UniSTS
SHRSP x BN Map1314.7798UniSTS
SHRSP x BN Map1314.7798RGD
Cytogenetic Map13q13UniSTS
Flank 2: (D13Mgh7)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01367,206,802 - 67,207,219NCBI
Rnor_5.01372,172,727 - 72,173,144UniSTS
RGSC_v3.41364,280,928 - 64,281,346RGD
RGSC_v3.41364,280,929 - 64,281,346UniSTS
RGSC_v3.11364,295,008 - 64,295,426RGD
Celera1361,984,489 - 61,984,941UniSTS
RH 3.4 Map13292.7UniSTS
RH 3.4 Map13292.7RGD
RH 2.0 Map13410.6RGD
FHH x ACI Map1328.32RGD
Cytogenetic Map13q21UniSTS


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)131107975663Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)131107975663Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131107975663Rat
61339Bp24Blood pressure QTL 240.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)13901674250513953Rat
1581554Pur11Proteinuria QTL 11urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13901690682995569Rat
1581573Uae36Urinary albumin excretion QTL 36urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13901690682995569Rat
1581570Eae17Experimental allergic encephalomyelitis QTL 174.1nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)1312193394108478121Rat
9589141Insul28Insulin level QTL 2810.820.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)131409633059096330Rat
7411662Foco29Food consumption QTL 2920.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)131409633059096330Rat
1300163Cardf1Cardiac cell morphology QTL 14.18aorta morphology trait (VT:0000272)artery lesion measurement (CMO:0000975)131444158250799665Rat
2302275Gluco37Glucose level QTL 373.8blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)131444158251577031Rat
2317040Aia21Adjuvant induced arthritis QTL 212.75joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)131462463159624631Rat
2317046Aia8Adjuvant induced arthritis QTL 83.9700000286102295joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)131462463159624631Rat
631645Bp121Blood pressure QTL 1213.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131981081464810814Rat
9589164Gluco66Glucose level QTL 666.670.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)132005247765052477Rat
1331784Bp222Blood pressure QTL 2222.944arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)132148248158537177Rat
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1324502279108770533Rat
61391Bp5Blood pressure QTL 55.6arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)132800833873008338Rat
70170Eae14Experimental allergic encephalomyelitis QTL 140.0024nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)132858445273584452Rat
1558644Cm45Cardiac mass QTL 453.60.002heart mass (VT:0007028)heart wet weight (CMO:0000069)132907693474076934Rat
6893338Cm76Cardiac mass QTL 7600.99heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)132907693474076934Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1335301263107975663Rat
2301962Cm72Cardiac mass QTL 724.12heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)133614753364868393Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133614753399968921Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133614753399968921Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133614753399968921Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)133614753399968921Rat
2303563Bw89Body weight QTL 896body mass (VT:0001259)body weight (CMO:0000012)133734634882346348Rat
61340Bp25Blood pressure QTL 254.20.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133937292784372927Rat
10755495Bp387Blood pressure QTL 3873.78arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133950130093652524Rat
4889861Pur29Proteinuria QTL 2913.80.005total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)134231074486833540Rat
1331750Bp220Blood pressure QTL 2202.98arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)134231074487310744Rat
70220Bp55Blood pressure QTL 555.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)134250834587508345Rat
61349Bp31Blood pressure QTL 315.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)134250834587508345Rat
1549897Stresp12Stress response QTL 123.35stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)134357571788575717Rat
619615Bp80Blood pressure QTL 800.0354arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134567662990676629Rat
2303032Bp328Blood pressure QTL 328arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134644457050799665Rat
4145117Mcs27Mammary carcinoma susceptibility QTL 270.0001mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)134877665553264877Rat
6893344Cm79Cardiac mass QTL 791.50.04heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)134905850767207219Rat
12879436Bp395Blood pressure QTL 395arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134999470851081193Rat
12879444Bp397Blood pressure QTL 397arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)135026035750897964Rat
12879472Bp399Blood pressure QTL 399arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)135060922853264877Rat
12879471Bp398Blood pressure QTL 398arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)135089609150918009Rat
12879441Bp396Blood pressure QTL 396arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)135108098996080989Rat
1298066Bp159Blood pressure QTL 1590.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)135156924896569248Rat
71119Thym2Thymus enlargement QTL 23.8thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)135157782490675199Rat
1641901Alcrsp6Alcohol response QTL 6response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1357903612102903612Rat
1354655Bp241Blood pressure QTL 2413.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1362975663107975663Rat
2303028Bp329Blood pressure QTL 329arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)136361128379034003Rat
724564Uae11Urinary albumin excretion QTL 115.7urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)136450135182995671Rat
738026Lnnr5Liver neoplastic nodule remodeling QTL 53.29liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)136500824591629354Rat
12879475Bp400Blood pressure QTL 400arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1366971778111971778Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general software used: MAPMAKER/QTL 1.1 1554311
qtl_general number of animals used: 151 F2 males 1554311