Rends2 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Rends2 (Renal damage susceptibility QTL 2) Rattus norvegicus

Symbol: Rends2
Name: Renal damage susceptibility QTL 2
RGD ID: 634353
Previously known as: Rds2
Trait: kidney blood vessel morphology trait   (VT:0000530)    
Measurement Type: organ lesion measurement   (CMO:0000677)    
LOD Score: Not Available
P Value: 0.05
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2119,333,571 - 56,983,283RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0120,341,560 - 58,000,154RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0121,827,911 - 58,931,238RGDRnor5.0
RGSC_v3.4119,793,567 - 54,719,627RGD_MAPPER_PIPELINERGSC3.4
Cross Type: intercross
Strains Crossed: SHR SHRSP 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Measurement Method

Vertebrate Trait

Rat Strain
SHR  (IEA)
SHRSP  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Contribution of Genetic Factors to Renal Lesions in the Stroke-Prone Spontaneously Hypertensive Rat. Gigante B, etal., Hypertension 2003 Oct;42(4):702-6. Epub 2003 Jul 21.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
69436Synj2synaptojanin 214651859446621919Rat
68434Pde10aphosphodiesterase 10A15176574352218086Rat
62024Rps12ribosomal protein S1212168085421683010Rat
3732Sod2superoxide dismutase 214763831847645163Rat
2581Esr1estrogen receptor 114110633541499104Rat
61797Prknparkin RBR E3 ubiquitin protein ligase14868865149882520Rat
619965Adcy2adenylate cyclase 213437563934822237Rat
2150Arg1arginase 112047587820488422Rat
61887Pdcd2programmed cell death 215648494756490437Rat
70494Terttelomerase reverse transcriptase12963721329659509Rat
3757Srd5a1steroid 5 alpha-reductase 113368606933720468Rat
3832Tcp1t-complex 114782906147836809Rat
69352Slc6a18solute carrier family 6 member 1812960728829621925Rat
67398TbpTATA box binding protein15646333056480430Rat
3234Oprm1opioid receptor, mu 114316005743413409Rat
3049Mas1MAS1 proto-oncogene, G protein-coupled receptor14787995647911500Rat
631382Taar4trace amine-associated receptor 412148105021482093Rat
631385Taar7htrace amine-associated receptor 7h12137349321374569Rat
631386Taar8btrace amine-associated receptor 8b12130297821307489Rat
631388Taar7gtrace amine-associated receptor 7g12138736021388436Rat
631391Taar8atrace amine associated receptor 8A12133276321333887Rat
631395Taar7dtrace-amine-associated receptor 7d12140932521410401Rat
620523Tcf21transcription factor 2112270135322704212Rat
621621Taar1trace-amine-associated receptor 112151774221518740Rat
631390Taar8ctrace amine-associated receptor 8c12128984321290877Rat
631392Taar7btrace amine-associated receptor 7b12144083221441908Rat
631387Taar7atrace amine-associated receptor 7a12145093321452009Rat
631394Taar7etrace-amine-associated receptor 7e12140171621402792Rat
628825Enpp1ectonucleotide pyrophosphatase/phosphodiesterase 112069874620763741Rat
631383Taar9trace amine-associated receptor 912127497221275988Rat
620902Mpc1mitochondrial pyruvate carrier 115243774552449369Rat
708511Enpp3ectonucleotide pyrophosphatase/phosphodiesterase 312056370020635044Rat
621405Hey2hes-related family bHLH transcription factor with YRPW motif 212682213126832218Rat
61936Slc22a2solute carrier family 22 member 214812106148163268Rat
708561Afdnafadin, adherens junction formation factor15388471154034216Rat
621647Vipvasoactive intestinal peptide14206487842073219Rat
621557Sdhasuccinate dehydrogenase complex flavoprotein subunit A12893596528960936Rat
621603Hint3histidine triad nucleotide binding protein 312703593627045799Rat
631393Taar7f-pstrace amine-associated receptor 7f, pseudogene12139567621396564Rat
620538Ppp1r14cprotein phosphatase 1, regulatory (inhibitor) subunit 14c13977340339886970Rat
620546Syne1spectrin repeat containing nuclear envelope protein 114151214641983382Rat
631384Taar6trace amine-associated receptor 612145847521459512Rat
619916Agpat41-acylglycerol-3-phosphate O-acyltransferase 414852513148633798Rat
621161Ezrezrin14696796147011505Rat
727955Ldhal6blactate dehydrogenase A-like 6B14599784545999268Rat
621092Psmb1proteasome 20S subunit beta 115644243256463544Rat
620676Rps6ka2ribosomal protein S6 kinase A215263158252906739Rat
727795Tfb1mtranscription factor B1, mitochondrial14411524044161737Rat
727798Trmt11tRNA methyltransferase 11 homolog12705443727109765Rat
621392Ccn2cellular communication network factor 212080219920805315Rat
619856Trdntriadin12395565124410494Rat
70949Dll1delta like canonical Notch ligand 115631206256320177Rat
2871Igf2rinsulin-like growth factor 2 receptor14797910948067501Rat
3224Slc22a1solute carrier family 22 member 114807665748103679Rat
708504Arid1bAT-rich interaction domain 1B14556799145923644Rat
1303071Akap7A-kinase anchoring protein 712008719020217799Rat
3720Slc9a3solute carrier family 9 member A312912463329167912Rat
3715Slc6a3solute carrier family 6 member 312970944329750413Rat
621790Exoc3exocyst complex component 312909129829122056Rat
1306836Rnf217ring finger protein 21712601666826108736Rat
619747Stx7syntaxin 712119707521237320Rat
620261Dynlt1dynein light chain Tctex-type 114688701746893956Rat
3701Slc22a3solute carrier family 22 member 314823547648324617Rat
1307525Kiaa0408LKiaa0408-like12861560028630309Rat
1308544Cfap90cilia and flagella associated protein 9013482588734850044Rat
1306375Mrpl36mitochondrial ribosomal protein L3612996548129968896Rat
1307311Mthfd1lmethylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like14044392640632911Rat
1307896Clptm1lCLPTM1-like12966754529683530Rat
1307454Tcp10bt-complex protein 10b15293782352961307Rat
1305187Gpr31G protein-coupled receptor 3115292695352927912Rat
1308562Ccr6C-C motif chemokine receptor 615247447752508301Rat
1307356Tent4aterminal nucleotidyltransferase 4A13376612133799433Rat
1307359Brd9bromodomain containing 912932997429357285Rat
738049Mas1lMAS1 proto-oncogene like, G protein-coupled receptor14787159247879942Rat
3668Sgk1serum/glucocorticoid regulated kinase 112298025723098122Rat
1308516Trip13thyroid hormone receptor interactor 1312935709329402078Rat
1310121Tppptubulin polymerization promoting protein12925711129281134Rat
735159Ipcef1interaction protein for cytohesin exchange factors 114323790343451735Rat
1306801Clvs2clavesin 212373527223762997Rat
1305200Ttll2tubulin tyrosine ligase like 215296718352976690Rat
1306387Mrpl18mitochondrial ribosomal protein L1814783716947841987Rat
708362Scaf8SR-related CTD-associated factor 814372768643855889Rat
1310175Slc2a12solute carrier family 2 member 1212280306822862204Rat
1308678Pnldc1PARN like ribonuclease domain containing exonuclease 114784322447861675Rat
1309747Ice1interactor of little elongation complex ELL subunit 113264037232682669Rat
1310979Thbs2thrombospondin 215567039455699789Rat
1309546Rmnd1required for meiotic nuclear division 1 homolog14085982940894390Rat
1311201Pabpc6poly(A) binding protein, cytoplasmic 615104526451048340Rat
1309729Fastkd3FAST kinase domains 313485834234866988Rat
1311306Rsph3radial spoke head 314710196147155201Rat
1311467Myct1myc target 114201813742029410Rat
1359185Taar5trace amine-associated receptor 512146992321470936Rat
1310742Dact2dishevelled-binding antagonist of beta-catenin 215518102355191026Rat
1308671Mtrr5-methyltetrahydrofolate-homocysteine methyltransferase reductase13486699134899425Rat
1311459Nkd2NKD inhibitor of WNT signaling pathway 212944289829470839Rat
1309633Wdr27WD repeat domain 2715583224055950457Rat
1310640Fndc1fibronectin type III domain containing 114728183947364247Rat
1305235Armt1acidic residue methyltransferase 114089455840918302Rat
1309918Rnaset2ribonuclease T215257634452603151Rat
1306482Rnf146ring finger protein 14612845886428475758Rat
1307544Cnksr3Cnksr family member 314349927343591630Rat
1309405Fbxo5F-box protein 514219606842202437Rat
1309309Irx4iroquois homeobox 413003056130039549Rat
1306962Slc18b1solute carrier family 18 member B112162823221670807Rat
1309374ErmardER membrane-associated RNA degradation15598331256004569Rat
1310945Ccdc170coiled-coil domain containing 17014094560741050010Rat
1310947Dynlt2dynein light chain Tctex-type 215597128355983301Rat
1309288Iydiodotyrosine deiodinase14000399940019323Rat
1307671Med23mediator complex subunit 2312049031520558461Rat
1307562Hddc2HD domain containing 212629403026313914Rat
1306681Smoc2SPARC related modular calcium binding 215526247255391804Rat
1310075Vnn1vanin 112153708421547395Rat
1306794Chd1chromodomain helicase DNA binding protein 115666174356729119Rat
1309834Irx2iroquois homeobox 213066096030666378Rat
1309060Irx1iroquois homeobox 113129461531300444Rat
1307099Eya4EYA transcriptional coactivator and phosphatase 412217227522415978Rat
1310304Fam120bfamily with sequence similarity 120B15632001556385064Rat
1307262Tmem242transmembrane protein 24214599271346019684Rat
1306621Zbtb2zinc finger and BTB domain containing 214082745740846733Rat
1310128Med10mediator complex subunit 1013347006433481698Rat
1305266Phf10PHD finger protein 1015595224955968994Rat
1308618TagapT-cell activation RhoGTPase activating protein14717072547179705Rat
1310033Moxd1monooxygenase, DBH-like 112107512421165348Rat
1305515Rgs17regulator of G-protein signaling 1714222224842324625Rat
1310141TbxtT-box transcription factor T15229809952309813Rat
1310046Adamts16ADAM metallopeptidase with thrombospondin type 1 motif, 1613243043632562481Rat
1305247Prdm9PR/SET domain 915650557956525726Rat
1359672Slc12a7solute carrier family 12 member 712947269229554246Rat
1311239Pdcd6programmed cell death 612896651828982188Rat
1311240Taar2trace amine associated receptor 212150029021504259Rat
70988Akap12A-kinase anchoring protein 1214073012340819863Rat
1560234Rsrc1-ps3arginine and serine rich coiled-coil 1, pseudogene 314364087643641971Rat
1564382Spry3-ps1sprouty RTK signaling antagonist 3, pseudogene 113515624835159075Rat
1561767Polr3g-ps1RNA polymerase III subunit G, pseudogene 115455194254552612Rat
1561992Sytl3synaptotagmin-like 314689630846967461Rat
1566426Ncoa7nuclear receptor coactivator 712685622827016950Rat
1565064Serac1serine active site containing 114662074146656801Rat
1303190Nox3NADPH oxidase 314423801244302851Rat
1564487Tulp4TUB like protein 414668241646813167Rat
1565215Rpl26-ps2ribosomal protein L26, pseudogene 212891793728918420Rat
1562948Acat2l1acetyl-CoA acetyltransferase 2-like 114780382247829012Rat
1560015RGD1560015similar to glycoprotein, synaptic 214726364747264682Rat
1564079Prr18proline rich 1815240021552404492Rat
1564281Zdhhc11zinc finger, DHHC-type containing 1112929621629327227Rat
1563246Rspo3R-spondin 312828391428368661Rat
1561027Pacrgparkin coregulated14988267150305564Rat
1560991Gtf2h5general transcription factor IIH subunit 514665680446663512Rat
1311933Leg1liver enriched gene 112879990228816230Rat
1359258Taar7ctrace amine-associated receptor 7C12142936421430440Rat
1311954Nsun2NOP2/Sun RNA methyltransferase 213366213933685887Rat
1559857Ahrraryl-hydrocarbon receptor repressor12899363429088673Rat
1359116Vom1r1vomeronasal 1 receptor 115454317354544143Rat
1359119Sft2d1SFT2 domain containing 115240968752425583Rat
1563824WtapWT1 associated protein14766596547691067Rat
1564024Tmem200atransmembrane protein 200A11932364619408324Rat
1359654Echdc1ethylmalonyl-CoA decarboxylase 112847635428507173Rat
1559962Hmgb2-ps6high mobility group box 2, pseudogene 611940928519410183Rat
1560609Vnn3vanin 312157136421583626Rat
1311599Lpcat1lysophosphatidylcholine acyltransferase 112976607029816401Rat
1311192Map3k4mitogen activated protein kinase kinase kinase 414843180148519358Rat
619893Plgplasminogen14832518648367643Rat
735106Ccdc127coiled-coil domain containing 12712892842028935885Rat
1359566Taar3trace amine-associated receptor 312149153821492566Rat
1583514LOC681177similar to GTPase activating protein testicular GAP113567520035781741Rat
1586689Calm1-ps2calmodulin 1, pseudogene 211971054019711425Rat
1583290Unc93aunc-93 homolog A15297314353029578Rat
1584748LOC679794similar to Cytochrome c, somatic14039100640392349Rat
1584766Brms1-ps1BRMS1, transcriptional repressor and anoikis regulator, pseudogene 114039663240399871Rat
1566403Tmem181transmembrane protein 18114683081246885173Rat
1583609Dlat-ps1dihydrolipoamide S-acetyltransferase, pseudogene 113323121133233823Rat
1587241Zfp273l-ps1zinc finger protein 273 like, pseudogene 113522232535238553Rat
1562524RGD1562524similar to ribosomal protein L2714254115942541467Rat
1583676Plekhg1pleckstrin homology and RhoGEF domain containing G114034868440434063Rat
1584942Brcc3-ps5BRCA1/BRCA2-containing complex, subunit 3, pseudogene 515361623653617108Rat
1584885Krt18-ps4keratin 18, pseudogene 415062105250622592Rat
1584886QkiQKI, KH domain containing RNA binding15038769850501568Rat
1564978Lrrc14bleucine rich repeat containing 14B12892147528925646Rat
1566336Cep72centrosomal protein 7212922531229255294Rat
1560718RGD1560718similar to putative protein kinase15370504253713934Rat
1566284Hnrnpa1-ps47heterogeneous nuclear ribonucleoprotein A1, pseudogene 4713960157639603128Rat
1566325RGD1566325similar to regulator of sex-limitation candidate 1613497913235014417Rat
1563977Epb41l2erythrocyte membrane protein band 4.1-like 211986301020037795Rat
1565877Zdhhc14zinc finger DHHC-type palmitoyltransferase 1414606912746340806Rat
1359366Acat2acetyl-CoA acetyltransferase 214769583347713879Rat
1565233Smok2asperm motility kinase 2A15357073753580441Rat
1594328Slc6a19solute carrier family 6 member 1912958620529604960Rat
1589982Ahcy-ps10adenosylhomocysteinase, pseudogene 1012032070620322406Rat
1589454Atp5f1c-ps1ATP synthase F1 subunit gamma, pseudogene 114740725947408527Rat
1591372Vom2r8vomeronasal 2 receptor, 815468633054725985Rat
1591347Vom2r9vomeronasal 2 receptor, 915485828654876546Rat
1588386LOC501391hypothetical LOC50139115331928153347307Rat
1590840Hnrnpa1-ps18heterogeneous nuclear ribonucleoprotein A1, pseudogene 1813400507334006590Rat
1590841Rpl10a-ps11ribosomal protein L10A, pseudogene 1113120294431203499Rat
1586034Dnaja4-ps1DnaJ heat shock protein family (Hsp40) member A4, pseudogene 112732226827323406Rat
1586664Smlr1small leucine-rich protein 111983739019858906Rat
1586097Nt5c2-ps25'-nucleotidase, cytosolic II, pseudogene 214269972042701497Rat
1586100Rab1-ps1RAB1, member RAS oncogene family, pseudogene 113879930038800803Rat
1586104Hdac1-ps17Histone deacetylase 1, pseudogene 1712801008128010909Rat
1586105Hnrnpa1-ps43heterogeneous nuclear ribonucleoprotein A1, pseudogene 4312675747026758537Rat
1586106Sec24c-ps2SEC24 homolog C, COPII coat complex component, pseudogene 212671385926716732Rat
1586108Zbed4-ps1zinc finger, BED-type containing 4, pseudogene 112390376923906388Rat
1589918Bcl2l13-ps1Bcl2-like 13, pseudogene 112889484128901203Rat
1584466Snx9sorting nexin 914642489746510096Rat
1584802Ndufs6l1NADH:ubiquinone oxidoreductase subunit S6-like 112996883329977423Rat
1583370Cep43centrosomal protein 4315253341852564025Rat
1587386Fth1-ps4ferritin heavy chain 1, pseudogene 412363807123638977Rat
1587036Dut-psdeoxyuridine triphosphatase pseudogene14836874848369608Rat
1598061MGC94891hypothetical protein LOC68121015174032851764041Rat
1595446Cldn20claudin 2014413376944134428Rat
1597456Tbpl1TATA-box binding protein like 112277789222803305Rat
1593465Cenpwcentromere protein W12752532427530464Rat
1593138Zswim5-ps1zinc finger, SWIM-type containing 5, pseudogene 115491844454923515Rat
1593144Hnrnpa1-ps10heterogeneous nuclear ribonucleoprotein A1, pseudogene 1014818954448190737Rat
1593145Rpl13a-ps12ribosomal protein L13A, pseudogene 1214288511242885723Rat
1593146Mrpl30-ps10mitochondrial ribosomal protein L30, pseudogene 1012106800321068796Rat
1597161LOC301792clone rb2 rab1a related protein pseudogene13639757136398662Rat
1592591Vom2r7vomeronasal 2 receptor, 715429248454321356Rat
1594836Dr1-ps1down-regulator of transcription 1, pseudogene 112564945525650368Rat
1594796Tpd52l1TPD52 like 112617203826290704Rat
1588779Frmd1FERM domain containing 115507928555090230Rat
1594173Zfp748zinc finger protein 74813510273235137107Rat
1595500Psma7-ps1proteasome 20S subunit alpha 7, pseudogene 113432412834324855Rat
1595505Lims1-ps1LIM zinc finger domain containing 1, pseudogene 114343510143436082Rat
1595515Ap2b1-ps1adaptor related protein complex 2 subunit beta 1, pseudogene 113429219034295856Rat
1590175LOC685793similar to serine/threonine kinase15501996455023500Rat
1595392Rgmbrepulsive guidance molecule BMP co-receptor b15676659856792396Rat
1594397Taar7i-pstrace amine associated receptor 7i, pseudogene12135270821353774Rat
1598121Ube2ql1ubiquitin-conjugating enzyme E2Q family-like 113354881433589174Rat
1597985T2brachyury 215231171152385194Rat
1598312Mtrf1lmitochondrial translation release factor 1 like14220855342221020Rat
1592663Paics-ps5phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase, pseudogene 515238715852390972Rat
1594231Zfp455l1zinc finger protein 455 like 113486693434944939Rat
1642424LOC100125364hypothetical protein LOC10012536415595041955953173Rat
1626058Vom2r-ps18vomeronasal 2 receptor, pseudogene 1815476397354790926Rat
1626025Vom2r-ps17vomeronasal 2 receptor, pseudogene 1715475849254759374Rat
1626026Vom2r-ps15vomeronasal 2 receptor, pseudogene 1515441160154412412Rat
2316468Vom1r-ps3vomeronasal 1 receptor pseudogene 315465816854659198Rat
2316469Vom1r-ps2vomeronasal 1 receptor pseudogene 215452185454522753Rat
2321841Ccnb2-ps2cyclin B2, pseudogene 212009975320101246Rat
2324378Mtfr2-ps2mitochondrial fission regulator 2, pseudogene 215687145256872588Rat
2324102Mrpl46-ps1mitochondrial ribosomal protein L46, pseudogene 114484687344856699Rat
2324148Tiam2TIAM Rac1 associated GEF 214391817944119499Rat
2324149LOC100362709proteasome activator complex subunit 2-like13472220534723042Rat
6493251Nid2-ps2nidogen 2, pseudogene 213593681635964021Rat
6494479LOC100911237zinc finger protein 420-like12888439028908726Rat
6495554Ppid-ps12peptidylprolyl isomerase D, pseudogene 1213406515534070734Rat
6495654Brcc3-ps1BRCA1/BRCA2-containing complex, subunit 3, pseudogene 115346758353468455Rat
6499508LOC100910237uncharacterized LOC10091023712167994021680668Rat
6497368LOC100910657sperm motility kinase Y-like15502005155039555Rat
7514941LOC102552482uncharacterized LOC10255248213931585739600133Rat
7525307LOC102555078uncharacterized LOC10255507815351560553547049Rat
7526176LOC102549462uncharacterized LOC10254946215070371950723245Rat
7542654LOC102549608uncharacterized LOC10254960815093418450953773Rat
7532311LOC102553363uncharacterized LOC10255336312064633620663699Rat
7511239LOC102546606uncharacterized LOC10254660614272165642725386Rat
7511531LOC102552728uncharacterized LOC10255272812007906220087734Rat
7512936LOC102555131afadin-like15312877653138065Rat
7540144LOC102546520uncharacterized LOC10254652013838878238396368Rat
7650092LOC102553526uncharacterized LOC10255352612093016520935165Rat
7636033Arf1-ps5ADP-ribosylation factor 1, pseudogene 512859712228600478Rat
7558063Tmem127-ps1transmembrane protein 127, pseudogene 114413524944138115Rat
7636934Rpl29-ps7ribosomal protein L29, pseudogene 712150126521502159Rat
7624072LOC102553457uncharacterized LOC10255345712093516520952028Rat
7598034Rpsa-ps16ribosomal protein SA, pseudogene 1615620053756201249Rat
7630011Mapre1-ps1microtubule-associated protein, RP/EB family, member 1, pseudogene 114054595940552212Rat
7630698LOC102555830uncharacterized LOC10255583012286840122877359Rat
7611691LOC102550953uncharacterized LOC10255095315612961556134424Rat
7616497LOC102551889uncharacterized LOC10255188915652581456559776Rat
7570512LOC102548198uncharacterized LOC10254819814507748945100267Rat
7571387LOC102548472uncharacterized LOC10254847214551254745515991Rat
7595988LOC102550786uncharacterized LOC10255078615612187456128366Rat
7620815LOC102551987uncharacterized LOC10255198714723466447246436Rat
7544841LOC102555832uncharacterized LOC10255583213967915439685439Rat
7600894LOC102549842zinc finger protein 91-like13507540835091448Rat
7579399LOC102554376uncharacterized LOC10255437612216858822169892Rat
7579985LOC102550720uncharacterized LOC10255072015615987056166702Rat
7563457LOC102553224uncharacterized LOC10255322414821483448221581Rat
7582363LOC102557016uncharacterized LOC10255701615641922356420968Rat
7550261Gnb1-ps3G protein subunit beta 1, pseudogene 313785007237852984Rat
7551033LOC102546790uncharacterized LOC10254679014299602243017130Rat
7583283LOC102546868uncharacterized LOC10254686812353050623533251Rat
7583660LOC102546709uncharacterized LOC10254670915320805153262172Rat
7734973LOC102556805rho GTPase-activating protein 20-like13862589138700200Rat
7693175LOC102546375uncharacterized LOC10254637515321050653226581Rat
7695090LOC102551311afadin-like15336152653399874Rat
7672762LOC102556502uncharacterized LOC10255650215500370355030833Rat
7704848Znf726l-ps1zinc finger protein 726 like, pseudogene 113495272434955509Rat
7723368Yes1-ps1YES proto-oncogene 1, Src family tyrosine kinase14336702943372347Rat
7683242LOC102553528uncharacterized LOC10255352814769055147695815Rat
7712286LOC102551377uncharacterized LOC10255137714666616746682516Rat
7740967Nkain2sodium/potassium transporting ATPase interacting 212466862725877051Rat
7697243LOC102551340zinc finger protein 728-like13516573235183894Rat
7718701LOC102547287zinc finger protein 728-like13505253535064003Rat
7670365LOC102556873uncharacterized LOC10255687315504724155070804Rat
7745301LOC102552962uncharacterized LOC10255296212034200220349386Rat
7746808LOC102555956zinc finger protein 120-like12886591728875433Rat
7747355LOC102548409uncharacterized LOC10254840914549136645497049Rat
7678966LOC102555465uncharacterized LOC10255546512257657822594738Rat
7681875LOC102553527uncharacterized LOC10255352713109632531105986Rat
9078384LOC103690946activated RNA polymerase II transcriptional coactivator p15 pseudogene12963011729632569Rat
9166062LOC103690972protein LSM12 homolog pseudogene14815397948154524Rat
9168471LOC103690969uncharacterized LOC10369096914738140247429212Rat
9220759Rpl30-ps2ribosomal protein L30, pseudogene 214248714542487730Rat
9308929LOC103690944uncharacterized LOC10369094412597207826002017Rat
9225009Ube2n-ps4ubiquitin-conjugating enzyme E2N, pseudogene 414274362642748575Rat
9270734LOC103690958uncharacterized LOC10369095814085412740859896Rat
9255928LOC103689976sperm motility kinase 3-like15310734853123984Rat
9257174LOC103690942solute carrier family 2, facilitated glucose transporter member 3 pseudogene12379865323799648Rat
9302186LOC103690933uncharacterized LOC10369093312170462321734218Rat
9343707LOC103690943uncharacterized LOC10369094312448027524481011Rat
9344246LOC10369095160S ribosomal protein L34 pseudogene13500559135008025Rat
9306135LOC103694999uncharacterized LOC10369499915413935054228159Rat
9470588LOC103690990uncharacterized LOC10369099015408881354139209Rat
9413649LOC103690986uncharacterized LOC10369098615355118053557766Rat
10059728Cahmcolon adenocarcinoma hypermethylated15038580350386959Rat
11364129LOC10834973040S ribosomal protein S20 pseudogene13275477832761865Rat
11455515LOC108348755uncharacterized LOC10834875513351530533523055Rat
11446120LOC108349507uncharacterized LOC10834950712907865029084116Rat
11443130LOC108348724uncharacterized LOC10834872415579636755802412Rat
11464132LOC10834944240S ribosomal protein S15a pseudogene13364139933642354Rat
11465027Leg1-ps1liver enriched gene 1, pseudogene 112857121028583888Rat
11436392LOC108349526uncharacterized LOC10834952615664327856664148Rat
11437209Rpl36a-ps17ribosomal protein L36A, pseudogene 1712111964521120113Rat
11437431LOC108349187uncharacterized LOC10834918712123747721243704Rat
11361878Fpr2-ps3formyl peptide receptor 2, pseudogene 315490085354901858Rat
11365258LOC108349443uncharacterized LOC10834944312185917221870434Rat
11451513LOC108349392uncharacterized LOC10834939213328716733302936Rat
11368566LOC108349099uncharacterized LOC10834909914858077048591834Rat
11368884LOC108349236uncharacterized LOC10834923612310406023112500Rat
11429793LOC108349511uncharacterized LOC10834951113496182534967714Rat
11452897LOC10834983140S ribosomal protein S29 pseudogene12126179721262125Rat
11433159LOC108349524uncharacterized LOC10834952415157156851583996Rat
11394768LOC108349732uncharacterized LOC10834973213735354037360813Rat
11414134LOC108348899uncharacterized LOC10834889912348657323493321Rat
11415566Trnae-cuc1transfer RNA glutamic acid (anticodon CUC) 112684641326846484Rat
11423353LOC108349518uncharacterized LOC10834951814447439944522719Rat
11385252Rpl36a-ps9ribosomal protein L36A, pseudogene 911975479819755162Rat
11375087LOC108349508uncharacterized LOC10834950813217249432206222Rat
11398775LOC10834850860S ribosomal protein L7a pseudogene12765349227655379Rat
11387570LOC108349468uncharacterized LOC10834946812325955723395640Rat
11400668Actb-ps4actin, beta, pseudogene 415125917351263331Rat
11392724LOC108348488uncharacterized LOC10834848815381127153829904Rat
11518972LOC108348481high mobility group protein B1 pseudogene15383319453833888Rat
11520738LOC10834951760S ribosomal protein L7a pseudogene14029604740296903Rat
11477525LOC108349802glyceraldehyde-3-phosphate dehydrogenase pseudogene14977352149774521Rat
11479453Soga3SOGA family member 312862903628701416Rat
11508573LOC10834872660S ribosomal protein L21 pseudogene12347687823477482Rat
11496872LOC10834907140S ribosomal protein S27-like12533649425337281Rat
11498733LOC10834947060S ribosomal protein L24 pseudogene15319464753195128Rat
11512463LOC108349469uncharacterized LOC10834946912330225523315783Rat
11490079LOC10834983560S ribosomal protein L35a pseudogene15656131056561783Rat
41085858Bard1-ps1BRCA1 associated RING domain 1, pseudogene 115649803756512415Rat
41137230LOC120099105uncharacterized LOC12009910513610834336115467Rat
41167968Rnu6-75RNA, U6 small nuclear 7515371795553718059Rat
41235294Trnaa-agc77transfer RNA alanine (anticodon AGC) 7712458968624589766Rat
41355712LOC120099123uncharacterized LOC12009912314791840647923178Rat
41356485Rab1a-ps4RAB1A, member RAS oncogene family, pseudogene 413812763038128295Rat
41087395LOC120099100uncharacterized LOC12009910013518412235188477Rat
41087412Snora20small nucleolar RNA, H/ACA box 2014783054047830669Rat
41324741LOC120099108uncharacterized LOC12009910814114428641198117Rat
41169781LOC120093143uncharacterized LOC12009314315314364253171314Rat
41206076Rnu6-959RNA, U6 small nuclear 95914182242541822528Rat
41358263LOC120100106uncharacterized LOC12010010615383994353906439Rat
41090434Rabggtb-ps2Rab geranylgeranyltransferase subunit beta, pseudogene 213374848833751375Rat
41091493LOC120100435small nucleolar RNA SNORA1713311115333111279Rat
41115603LOC120098885uncharacterized LOC12009888512276637922777891Rat
41359684Rnu6-894RNA, U6 small nuclear 89415467191154672008Rat
41092135Eif1-ps5eukaryotic translation initiation factor 1, pseudogene 512894424028944805Rat
41092469LOC120100446small nucleolar RNA SNORA1712874163928741754Rat
41116364LOC120100089uncharacterized LOC12010008913933371439367466Rat
41116401LOC120100100uncharacterized LOC12010010014921145349223035Rat
41146272Rnu11-3RNA, U11 small nuclear 311938143719381570Rat
41327994LOC120097700uncharacterized LOC12009770012778739427789150Rat
41094137LOC120100092uncharacterized LOC12010009213944664439458137Rat
41260918LOC120098884uncharacterized LOC12009888412275015822766306Rat
41261521LOC120100131U6 spliceosomal RNA12313135023131456Rat
41095055LOC120097701uncharacterized LOC12009770113015796330160240Rat
41120638LOC120100362small nucleolar RNA SNORA2413371671333716842Rat
41176576LOC120100395small nucleolar RNA U2-1914221196842212047Rat
41187490Mycbp-ps1Myc binding protein, pseudogene 113403274734033058Rat
41211591C7h8orf33-ps1similar to human chromosome 8 open reading frame 33, pseudogene 115657707856581277Rat
41364416LOC120093090sperm motility kinase 3A-like15338320753387835Rat
41391896LOC120093081uncharacterized LOC12009308115320502353206573Rat
41121065Rpl24-ps5ribosomal protein L24, pseudogene 515309710953097586Rat
41342237Trnap-agg24transfer RNA proline (anticodon AGG) 2413455371434553795Rat
41393107LOC120099111uncharacterized LOC12009911114427801944357752Rat
41123377LOC120100087uncharacterized LOC12010008713961516839639974Rat
41179892LOC120093155uncharacterized LOC12009315513527185235375055Rat
41191148LOC120097696uncharacterized LOC12009769613880800538876306Rat
41191607Rnu6-546RNA, U6 small nuclear 54614704589247045997Rat
41192130Nid2-ps5nidogen 2, pseudogene 513613231736147184Rat
41343609LOC120097694igE-binding protein-like13413543734150006Rat
41343633LOC120100475U2 spliceosomal RNA14310999143110055Rat
41367908LOC120100097uncharacterized LOC12010009714180708741809467Rat
41124938LOC120100484small nucleolar RNA U1312340034023400445Rat
41267112LOC120099121acetyl-CoA acetyltransferase, cytosolic-like14774190047759437Rat
41267122LOC120098984uncharacterized LOC12009898412984137229901226Rat
41288670Smokyl-ps1sperm motility kinase Y like, pseudogene 115497810954992728Rat
41102376LOC120100090uncharacterized LOC12010009013849901038527803Rat
41158252LOC120099117uncharacterized LOC12009911714693538246941677Rat
41182833Nid2-ps6nidogen 2, pseudogene 613954880339562954Rat
41182998H3f3a-ps4H3.3 histone A, pseudogene 415151296751532693Rat
41183125LOC120098836uncharacterized LOC12009883612056147420565071Rat
41194585LOC120099119acetyl-CoA acetyltransferase, cytosolic-like14776073847767531Rat
41270053LOC120099102rho GTPase-activating protein 20-like13584919135873247Rat
41127918LOC120097709uncharacterized LOC12009770914370756243712250Rat
41183869LOC120100101uncharacterized LOC12010010114967328549690129Rat
41219482Mrto4-ps2mRNA turnover 4, ribosome maturation factor, pseudogene 214651482446518112Rat
41270287LOC120099122uncharacterized LOC12009912214772752647730867Rat
41292788LOC120100099uncharacterized LOC12010009914894820948950577Rat
41128578LOC120099138uncharacterized LOC12009913815663459156638773Rat
41161183Snora29small nucleolar RNA, H/ACA box 2914783383547833971Rat
41130940LOC120099109uncharacterized LOC12009910914352558343527559Rat
41230696Snord100small nucleolar RNA, C/D box 10012168226921682343Rat
41199722LOC120093055small Cajal body-specific RNA 315264827452648388Rat
41200627LOC120099128uncharacterized LOC12009912815601060056014665Rat
41274044LOC120100449small nucleolar RNA SNORA1712761898427619106Rat
41352398LOC120097708uncharacterized LOC12009770814311178143117463Rat
41376744LOC120100178U1 spliceosomal RNA14058664340586804Rat
41109328Rab1a-ps2RAB1A, member RAS oncogene family, pseudogene 213680037436801331Rat
41110171LOC120100245U1 spliceosomal RNA15299135852991520Rat
41201839LOC120098986uncharacterized LOC12009898612990898529924691Rat
41202383LOC120100098uncharacterized LOC12010009815028556950361263Rat
40996607LOC120099120acetyl-CoA acetyltransferase, cytosolic-like14771719647723781Rat
40997215Srsf3-ps8serine and arginine rich splicing factor 3, pseudogene 814539120245391657Rat
40947244LOC120099110uncharacterized LOC12009911014391255943915882Rat
41011483LOC120097411igE-binding protein-like12160060821621842Rat
40948223Nid2-ps13nidogen 2, pseudogene 1313841522738440562Rat
40949489Rpl19-ps9ribosomal protein L19, pseudogene 915245594652469992Rat
40975206LOC120099127uncharacterized LOC12009912715509049255108428Rat
41340734Smokyl-ps2sperm motility kinase Y like, pseudogene 215349574053497994Rat
40952154LOC120097710uncharacterized LOC12009771014459645644608059Rat
40976307LOC120097714uncharacterized LOC12009771415574275555746829Rat
40955162LOC120098992uncharacterized LOC12009899213117776731197773Rat
40978443LOC120100095uncharacterized LOC12010009513961491439670599Rat
40928345LOC120099124uncharacterized LOC12009912414839474648414438Rat
40955462Trnap-agg33transfer RNA proline (anticodon AGG) 3314672881946728900Rat
40999580LOC120100096uncharacterized LOC12010009613847592038485517Rat
40983824LOC120098809uncharacterized LOC12009880911971052519718514Rat
40933306LOC120099116uncharacterized LOC12009911614662698446634286Rat
40933802LOC120098871uncharacterized LOC12009887112234033222351065Rat
40985057LOC120100215U7 small nuclear RNA13494816234948226Rat
40934626LOC120100109uncharacterized LOC12010010915336680853367922Rat
40935377Rpl24-ps8ribosomal protein L24, pseudogene 815302745853029294Rat
40938093Nid2-ps4nidogen 2, pseudogene 413927484839317809Rat
40962765Rnu6-783RNA, U6 small nuclear 78313480425834804364Rat
40938986Rnu6-1001RNA, U6 small nuclear 100112519679325196899Rat
40964934LOC120100455small nucleolar RNA SNORA1712526492725265029Rat
41010071LOC120100107uncharacterized LOC12010010715355901253570720Rat
41010141Rnu6-395RNA, U6 small nuclear 39515380653353806636Rat
41010327LOC120099115uncharacterized LOC12009911514605725346062998Rat
40941038Rnu4-5RNA, U4 small nuclear 512544589825446060Rat
40967854LOC120100474small nucleolar RNA SNORD8814129686941296962Rat
40996352Rab1a-ps3RAB1A, member RAS oncogene family, pseudogene 313750936237511163Rat
41025192LOC120099114uncharacterized LOC12009911414604328046049545Rat
41244766Snora33small nucleolar RNA, H/ACA box 3312168260321682729Rat
41077590LOC120098893uncharacterized LOC12009889312313267323172438Rat
41050934LOC120098989uncharacterized LOC12009898912998124829993418Rat
41051800LOC120100093uncharacterized LOC12010009313904619339056506Rat
41246986LOC120097713uncharacterized LOC12009771315110963951142691Rat
41247671Rnu6-859RNA, U6 small nuclear 85914369158143691678Rat
41247706Rpl23a-ps4ribosomal protein L23a, pseudogene 415221546152222521Rat
41332180Trnav-cac7transfer RNA valine (anticodon CAC) 712512645025126530Rat
41030689LOC120100112U4 spliceosomal RNA12774229627742439Rat
41053266LOC120100094uncharacterized LOC12010009413789243737948050Rat
41053334Rab1a-ps1RAB1A, member RAS oncogene family, pseudogene 113664225336643958Rat
41135452Trnap-agg46transfer RNA proline (anticodon AGG) 4615533563255335712Rat
41053469LOC120097702uncharacterized LOC12009770213260885332613035Rat
41152311LOC120099112uncharacterized LOC12009911214501622045033505Rat
41057629LOC120098995uncharacterized LOC12009899513139434731396128Rat
41220638LOC120100379small nucleolar RNA SNORA2112936727429367411Rat
41258807LOC120100091uncharacterized LOC12010009113901301039029344Rat
41297741LOC120100104sperm motility kinase Y-like15408241354992728Rat
41222494LOC120100088uncharacterized LOC12010008813773126837738194Rat
41222953Rpl21-ps4ribosomal protein L21, pseudogene 413508614635087759Rat
41033822LOC120099125uncharacterized LOC12009912515264003452644825Rat
41224548Hnrnpa1-ps23heterogeneous nuclear ribonucleoprotein A1, pseudogene 2312838267628386857Rat
41299842LOC120099113uncharacterized LOC12009911314531237845317435Rat
41336906LOC120100462small nucleolar RNA SNORA4014800320648003337Rat
41337719LOC120099107uncharacterized LOC12009910714020591640280051Rat
41226396Rpl24-ps7ribosomal protein L24, pseudogene 715328934853289825Rat
41302774LOC120098808uncharacterized LOC12009880811959611119606529Rat
41334313LOC120100334U2 spliceosomal RNA15130247251302596Rat
41037329LOC120099103uncharacterized LOC12009910313609044736107414Rat
41063986LOC120099104uncharacterized LOC12009910413603618236044823Rat
41064447LOC120099099uncharacterized LOC12009909913498934035015200Rat
41303130LOC120100105sperm motility kinase 3A-like15327403853282717Rat
41016349LOC120097707uncharacterized LOC12009770714215732742158793Rat
41066016LOC120100103uncharacterized LOC12010010315235338152363220Rat
41042088LOC120099033uncharacterized LOC12009903313324656133288412Rat
41067050LOC120100438small nucleolar RNA SNORA1712011976620119889Rat
41067146LOC120100108uncharacterized LOC12010010815326569453273015Rat
41307068LOC120100394small nucleolar RNA U2-3014221219042212259Rat
41042371LOC120100344small nucleolar RNA SNORD10112168155721681630Rat
41042460LOC120099118uncharacterized LOC12009911814718362847198482Rat
41043647LOC120100398U2 spliceosomal RNA12047052420470672Rat
41307516LOC120100432small nucleolar RNA SNORA1714844963848449772Rat
41021704Smok2a-ps1sperm motility kinase 2A, pseudogene 115340413253406963Rat
41021941LOC120098932uncharacterized LOC12009893212608422526091345Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
11047D2Mit1322515679441956794475Ratregion
33931D1Mit109515683509656835181Ratregion
34433D1Mgh314514580314045803251Ratregion
34465D1Mgh421714896358448963799Ratregion
34662D1Mgh215012234064722340797Ratregion
33660D1Mit913214936146549361612Ratregion
36253D1Rat1713414964823549648371Ratregion
36303D1Rat626511933357119333836Ratregion
37264D1Rat12711315236754352367656Ratregion
37598D1Rat17618913273727332737458Ratregion
35242D1Rat1118014026042240260599Ratregion
35517D1Rat1816114926836249268520Ratregion
36968D1Rat9122214678299546783217Ratregion
37194D1Rat20720615530042755300635Ratregion
37962D1Rat20123915698304756983283Ratregion
37974D1Rat21124313105084031051081Ratregion
36550D1Rat1215713349198733492143Ratregion
36552D1Rat2114015601346656013599Ratregion
36590D1Rat16015512845987428460027Ratregion
36610D1Rat2016415389511753895281Ratregion
36626D1Rat1516714343287343433040Ratregion
36640D1Rat1416613235591032356093Ratregion
36651D1Rat1615114223682142236969Ratregion
34973D1Rat1315814079518940795347Ratregion
35685D1Rat1012812469741724697545Ratregion
35853D1Rat912912952149329521616Ratregion
35885D1Rat814212887978028879880Ratregion
35891D1Rat1912614939317249393289Ratregion
39676D1Rat31424015224345852243690Ratregion
38004D1Rat12520115084066650840869Ratregion
38028D1Rat12110312076315820763261Ratregion
38082D1Rat14323614917668849176934Ratregion
38134D15Rat4521814409563844095856Ratregion
38164D1Rat18213015561564855615776Ratregion
40368D1Rat25314714348641943486572Ratregion
40644D1Rat25711015658582056585934Ratregion
40704D1Rat25220512339999023400201Ratregion
38426D1Rat19122914896358448963811Ratregion
38568D1Rat23824613373786933738115Ratregion
38640D1Rat15320712070439820704605Ratregion
38642D1Rat15423215117257751172819Ratregion
38722D1Rat22823514934202849342260Ratregion
38782D1Rat13619514328473143284926Ratregion
40086D1Rat25114312742866727428818Ratregion
40236D1Rat31517115246449852464672Ratregion
39086D1Rat23913413178872531788853Ratregion
39376D1Rat31320914564632545646532Ratregion
42077D1Arb332612234059822340924Ratregion
42264D1Rat46311012220216622202271Ratregion
42265D1Arb518313332442333324606Ratregion
42266D1Rat48923815271276252713019Ratregion
42267D1Rat49213015122287651222999Ratregion
42449D1Rat39123811964618819646425Ratregion
42451D1Rat47920412016619620166426Ratregion
42451D1Rat47920412016622220166426Ratregion
42452D1Rat39420612812535928125552Ratregion
42453D1Rat47822112491183924912057Ratregion
42454D1Rat39321112817879628178996Ratregion
42455D1Rat39721114079516340795374Ratregion
42456D1Rat33017213297220532972379Ratregion
42456D1Rat33017213297220532972816Ratregion
42456D1Rat33017213297229132972379Ratregion
42459D1Rat40021914079512940795348Ratregion
42460D1Rat40221514215750442157730Ratregion
42461D1Rat33212814774692947747057Ratregion
42461D1Rat33212814777221347772342Ratregion
42462D1Rat40314414706848547068629Ratregion
42464D1Rat40421715627202556272238Ratregion
40798D1Rat25620715594973655949961Ratregion
40826D1Rat25421214274504142745251Ratregion
41656D1Rat37716512974323529743400Ratregion
41916D1Rat9217515503371155033884Ratregion
43197D1Got2620612023483820235046Ratregion
43198D1Got2920212232122222321426Ratregion
43200D1Got2714912298244022982586Ratregion
43201D1Got3114612284279422842940Ratregion
43204D1Got3430012833116228331462Ratregion
43205D1Got3725312846122828461481Ratregion
43206D1Got3517912808592828086107Ratregion
43207D1Got5221414613640446136620Ratregion
43208D1Got5119014607517346075361Ratregion
43209D1Got4912714597359745973724Ratregion
43210D1Got5814114626607946266220Ratregion
43211D1Got4719714614925146149443Ratregion
43213D1Got4816014513881245138972Ratregion
43215D1Got5010814455533344555441Ratregion
43216D1Got27416014496580644965966Ratregion
43217D1Got5921014674186346742073Ratregion
43219D1Got6018214832654248326723Ratregion
43220D1Got6124114921817149218412Ratregion
43221D1Got5714414761120647611350Ratregion
43222D1Got5524214836265448362895Ratregion
43224D1Wox3714615034714250347288Ratregion
43225D1Wox115015032265250322795Ratregion
43227D1Got6416415376926453769425Ratregion
43227D1Got6416415376926453770571Ratregion
43230D1Got6723215673245856732692Ratregion
43661D1Got28325613200363932003890Ratregion
60238D1Got27320212970402129704223Ratregion
60243D1Got3213612629534526295481Ratregion
60244D1Got3618713001973330019920Ratregion
60245D1Got3818512909814429098329Ratregion
60246D1Got3916714212506642125233Ratregion
60247D1Got4014014154927241549412Ratregion
60248D1Got4118114190794141908122Ratregion
60249D1Got4213914368105343681192Ratregion
60250D1Got4315914220475342204912Ratregion
60251D1Got4426414266269242662956Ratregion
60252D1Got4512314220475642204879Ratregion
60253D1Got4614514401122144011366Ratregion
60256D1Got6213115036195050362081Ratregion
61283D1Mco218015673248456732668Ratregion
66403D1Mco418012903803729038251Ratregion
66617D1Mco4023114487495644875187Ratregion
66688D1Uia1520112867125728671458Ratregion
67242D1Arb425414023688040237138Ratregion
67244D1Arb713814319187143192009Ratregion
1631110D1Got30414514095149740951644Ratregion
1632082D1Cebr1018812991673329916921Ratregion
1626786D1Mco7525013276550232766175Ratregion
1626786D1Mco7525013276592532766175Ratregion
1627243D1Mco7217412580818825808362Ratregion
1627347D1Mco7324813006477630065024Ratregion
1627499D1Mco7419613193062231930818Ratregion
1627856D17Got21514913248534932485498Ratregion
1628396D17Got22215113110931331109465Ratregion
1629265D1Got3029414605990546059999Ratregion
1629318D1Cebr1116412951554529515709Ratregion
1629386D1Wox8215012405052124050671Ratregion
1629572D1Got37422214792179647922011Ratregion
1638813D1Got30517313230874832308921Ratregion
1641531D1Wox5114312970884929708992Ratregion
1633578D1Wox4520613332442833324634Ratregion
1639850D1Got43924513699110336991380Ratregion
1640652D1Got43320612558681925587025Ratregion
1636018D1Cebr722614659160346591829Ratregion
1636822D1Got36314712624678026246927Ratregion
1636991D1Cebr927214746739147467665Ratregion
1637068D17Got2219913075895930759055Ratregion
1637170D1Cebr218814660473246604922Ratregion
1637228D1Cebr1220312950620229506405Ratregion
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5500037UniSTS:23631932512324212223242447Ratregion
5499703UniSTS:23416719215002076750020952Ratregion
5502275RH12424210412363871923638823Ratregion
5502803POLS108713378763433788721Ratregion
5502845Ap2b133413429260534292939Ratregion
5502845Ap2b133413429260534292939Ratregion
5500707RH7132217113472282534722996Ratregion
5503640UniSTS:46544810815631330156313409Ratregion
5501139PMC148819P723214847597448476206Ratregion
5501443T88115230330052304181Ratregion
5504163UniSTS:25940757613429268234293258Ratregion
5501850MARC_15733-15734:1013528717:192215669790956698831Ratregion
5502112MARC_4677-4678:996679594:17313472260734722680Ratregion
5502533RH12520521014697086546971872Ratregion
Position Markers

Flank 1: (D1Rat6)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2119,333,571 - 19,333,836 (+)MAPPER
Rnor_6.0120,341,560 - 20,341,824NCBI
Rnor_5.0121,827,911 - 21,828,175UniSTS
RGSC_v3.4119,793,567 - 19,793,832RGD
RGSC_v3.4119,793,568 - 19,793,832UniSTS
RGSC_v3.1119,793,630 - 19,793,894RGD
Celera117,724,799 - 17,725,063UniSTS
RH 3.4 Map1182.9RGD
RH 3.4 Map1182.9UniSTS
RH 2.0 Map1111.9RGD
SHRSP x BN Map112.5699RGD
Cytogenetic Map1p12UniSTS
Peak: (D1Rat238)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2133,737,869 - 33,738,115 (+)MAPPER
Rnor_6.0136,371,658 - 36,371,903NCBI
Rnor_5.0137,768,680 - 37,768,925UniSTS
RGSC_v3.4173,897,422 - 3,897,668RGD
RGSC_v3.4173,897,423 - 3,897,668UniSTS
RGSC_v3.1173,897,422 - 3,897,668RGD
Celera132,342,596 - 32,342,841UniSTS
SHRSP x BN Map118.27UniSTS
SHRSP x BN Map118.27RGD
FHH x ACI Map125.71RGD
Cytogenetic Map17p14UniSTS
Flank 2: (D1Rat201)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2156,983,047 - 56,983,283 (+)MAPPER
Rnor_6.0157,999,919 - 58,000,154NCBI
Rnor_5.0158,931,003 - 58,931,238UniSTS
RGSC_v3.4154,719,264 - 54,719,627RGD
RGSC_v3.4154,719,344 - 54,719,579UniSTS
RGSC_v3.1154,722,289 - 54,722,524RGD
Celera153,183,677 - 53,183,912UniSTS
RH 3.4 Map1674.6UniSTS
RH 3.4 Map1674.6RGD
RH 2.0 Map1402.8RGD
SHRSP x BN Map181.26RGD
FHH x ACI Map175.5199RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354647Despr8Despair related QTL 80.0000341locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1124744506Rat
2298546Neuinf4Neuroinflammation QTL 45.1nervous system integrity trait (VT:0010566)spinal cord RT1-B protein level (CMO:0002132)1128736750Rat
2313053Bss51Bone structure and strength QTL 513.80.0001tibia length (VT:0004357)tibia length (CMO:0000450)1132356093Rat
2313070Bss52Bone structure and strength QTL 524.40.0001body length (VT:0001256)body length (CMO:0000013)1132356093Rat
2313090Bmd69Bone mineral density QTL 694.40.0001tibia mineral mass (VT:1000283)cortical volumetric bone mineral density (CMO:0001730)1132356093Rat
738020Pia8Pristane induced arthritis QTL 84.7joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1165833076Rat
1578650Bmd6Bone mineral density QTL 612.2femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)150910843284926Rat
1578651Bmd7Bone mineral density QTL 714.2femur mineral mass (VT:0010011)cortical volumetric bone mineral density (CMO:0001730)150910843284926Rat
1578669Bss9Bone structure and strength QTL 96.3femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)150910843284926Rat
1554320Bmd1Bone mineral density QTL 112.20.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)150910886060548Rat
1600360Mcs16Mammary carcinoma susceptibility QTL 162.4mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)1224439043433040Rat
7421626Bp360Blood pressure QTL 3600.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1439328949393289Rat
631688Hcas2Hepatocarcinoma susceptibility QTL 230.0001liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)15925874115540829Rat
4889451Eae29Experimental allergic encephalomyelitis QTL 295.51nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)1592587724697545Rat
631508Sald1Serum aldosterone level QTL 13.7blood aldosterone amount (VT:0005346)serum aldosterone level (CMO:0000487)1985600154856001Rat
2302038Pia31Pristane induced arthritis QTL 315.50.001blood autoantibody amount (VT:0003725)serum immunoglobulin M-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002111)11099206555992065Rat
1300167Hrtrt2Heart rate QTL 24.35heart pumping trait (VT:2000009)heart rate (CMO:0000002)11148131275088344Rat
2313062Bmd73Bone mineral density QTL 733.90.0001tibia mineral mass (VT:1000283)cortical volumetric bone mineral density (CMO:0001730)11148131282174945Rat
2313065Bss67Bone structure and strength QTL 673.10.0001tibia area (VT:1000281)tibia total energy absorbed before break (CMO:0001736)11148131282174945Rat
2313069Bss68Bone structure and strength QTL 682.90.0001tibia size trait (VT:0100001)tibia total energy absorbed before break (CMO:0001736)11148131282174945Rat
2313075Bss66Bone structure and strength QTL 663.40.0001tibia length (VT:0004357)tibia length (CMO:0000450)11148131282174945Rat
2313077Bss69Bone structure and strength QTL 693.50.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)11148131282174945Rat
2313092Bmd72Bone mineral density QTL 722.50.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)11148131282174945Rat
2313097Bss70Bone structure and strength QTL 703.50.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)11148131282174945Rat
2317755Glom22Glomerulus QTL 223.8urine protein amount (VT:0005160)urine protein level (CMO:0000591)11148148232355910Rat
1578756Iddm22Insulin dependent diabetes mellitus QTL 222.7blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)11183518156835181Rat
5684998Bss101Bone structure and strength QTL 1013.6tibia strength trait (VT:1000284)tibia ultimate force (CMO:0001734)11543162149361612Rat
5684999Bss102Bone structure and strength QTL 1025.50.00000072tibia strength trait (VT:1000284)tibia stiffness (CMO:0001735)11543162149361612Rat
631494Bp95Blood pressure QTL 95400.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)11620621049268520Rat
634353Rends2Renal damage susceptibility QTL 20.05kidney blood vessel morphology trait (VT:0000530)organ lesion measurement (CMO:0000677)11933357156983283Rat
1558642Prcr2Prostate cancer resistance QTL 24.3prostate integrity trait (VT:0010571)area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)12076315844095856Rat
724520Bp145Blood pressure QTL 1452.10.0024arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)12078482865784828Rat
1357397Bw41Body weight QTL 414.190.0001body mass (VT:0001259)body weight (CMO:0000012)12234064749361612Rat
1357401Bw43Body weight QTL 433.75body mass (VT:0001259)body weight (CMO:0000012)12234064749361612Rat
1357400Bw62Body weight QTL624.05inguinal fat pad mass (VT:0010424)inguinal fat pad weight to body weight ratio (CMO:0001253)12234064767340647Rat
631495Bp96Blood pressure QTL 964.52arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)122340647102268831Rat
1331785Rf27Renal function QTL 274.643urine sodium amount (VT:0006274)urine sodium level (CMO:0000129)12887978078430678Rat
1358359Sradr1Stress Responsive Adrenal Weight QTL 14.74adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)130882023123479925Rat
731169Bp153Blood pressure QTL 1530.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)13105084033492143Rat
2316649Bp344Blood pressure QTL 344arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)13224973533038814Rat
70225Bp58Blood pressure QTL 583.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132356093162846471Rat
1300172Bp172Blood pressure QTL 1723.56arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)13273727390665040Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132737458199368955Rat
1354599Bw29Body weight QTL 293.460.001body mass (VT:0001259)body weight (CMO:0000012)13344984878449848Rat
1354643Foco2Food consumption QTL 27.170.0001eating behavior trait (VT:0001431)food intake rate (CMO:0000427)13344984878449848Rat
8552900Pigfal1Plasma insulin-like growth factor 1 level QTL 17.4blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)13483685879836858Rat
8552948Pigfal11Plasma insulin-like growth factor 1 level QTL 114.7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)13483685879836858Rat
9589820Insglur3Insulin/glucose ratio QTL 310.750.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)13483685879836858Rat
1331732Srn4Serum renin concentration QTL 44.467renin activity (VT:0005581)plasma renin activity level (CMO:0000116)13523959878430678Rat
1331792Rf29Renal function QTL 294.589urine potassium amount (VT:0010539)urine potassium level (CMO:0000128)13523959878430678Rat
2313051Bss57Bone structure and strength QTL 573.70.0001tibia strength trait (VT:1000284)bone polar moment of inertia (CMO:0001558)143284731118944897Rat
2313059Bss55Bone structure and strength QTL 553.20.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143284731118944897Rat
2313072Bss53Bone structure and strength QTL 534.30.0001tibia length (VT:0004357)tibia length (CMO:0000450)143284731118944897Rat
2313078Bss54Bone structure and strength QTL 543.50.0001tibia area (VT:1000281)tibia midshaft cross-sectional area (CMO:0001717)143284731118944897Rat
2313094Bss58Bone structure and strength QTL 583.70.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)143284731118944897Rat
2313098Bmd70Bone mineral density QTL 703.60.0001tibia mineral mass (VT:1000283)cortical volumetric bone mineral density (CMO:0001730)143284731118944897Rat
2313099Bss56Bone structure and strength QTL 562.40.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)143284731118944897Rat
2302059Pia36Pristane induced arthritis QTL 363.80.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)14333300288333002Rat
1331778Rf28Renal function QTL 284.66urine potassium amount (VT:0010539)urine potassium excretion rate (CMO:0000761)14580314078430678Rat
2313402Anxrr24Anxiety related response QTL 24aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)148963584144267916Rat
4889962Bss94Bone structure and strength QTL 943.8tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)14936146582174945Rat
1578649Bmd8Bone mineral density QTL 84.9femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)14939317294393172Rat
1578654Bss10Bone structure and strength QTL 104femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)149393172159356837Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)149393289199050459Rat
6903308Scl36Serum cholesterol QTL 3620.0125blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)15386304190532583Rat
4889919Bss86Bone structure and strength QTL 864.1tibia area (VT:1000281)tibia midshaft total cross-sectional area (CMO:0001715)15389511782174945Rat
4889929Bss87Bone structure and strength QTL 876.7tibia area (VT:1000281)tibia-fibula cortical bone endosteal cross-sectional area (CMO:0001722)15389511782174945Rat
61342Bp27Blood pressure QTL 273.40.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)15673266898773277Rat
2300164Bmd44Bone mineral density QTL 445.40.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)156949932101949932Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Rends2


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-04-14 Rends2  Renal damage susceptibility QTL 2  Rds2    Symbol updated 1299863 APPROVED

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general SHR allele associates with a protective effect on renal damage 631854