Cia24 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Cia24 (Collagen induced arthritis QTL 24) Rattus norvegicus

Symbol: Cia24
Name: Collagen induced arthritis QTL 24
RGD ID: 634342
Previously known as: Cia13; Type II Collagen induced arthritis QTL 24
Trait: joint integrity trait   (VT:0010548)    
Measurement Type: joint inflammation composite score   (CMO:0000919)    
LOD Score: 4.5
P Value: Not Available
Variance: 7.6
Inheritance Type: additive
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24146,565,735 - 175,236,377RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.04145,373,934 - 176,509,907RGD_MAPPER_PIPELINERnor6.0
Rnor_5.04208,670,980 - 240,723,450RGDRnor5.0
RGSC_v3.44149,304,432 - 179,854,843RGDRGSC3.4
RGSC_v3.14149,549,274 - 180,099,967RGD
Cross Type: intercross
Strains Crossed: DA/Bkl BN/SsN 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Candidate Gene Status
Cd4 is a candidate Gene for Cia24
Cd69 is a candidate Gene for Cia24
Tnfrsf7 is a candidate Gene for Cia24
Tnfrsf1a is a candidate Gene for Cia24

Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
BN/SsN  (IEA)
DA/Bkl  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Polymorphisms of the tumor necrosis factor receptor type 1 locus among autoimmune susceptible and resistant inbred rat strains. Furuya T, etal., Immunogenetics 2001 Jul;53(5):427-9.
2. Identification of four new quantitative trait loci regulating arthritis severity and one new quantitative trait locus regulating autoantibody production in rats with collagen-induced arthritis. Griffiths MM, etal., Arthritis Rheum 2000 Jun;43(6):1278-89
3. Quest for arthritis-causative genetic factors in the rat. Joe B Physiol Genomics. 2006 Oct 3;27(1):1-11. Epub 2006 Jun 27.
4. The complexity in hunting for candidate genes within QTL that determine susceptibility to arthritis in rats. Xiong Q, etal., Crit Rev Immunol. 2008;28(2):127-57.
5. Genetic and molecular basis of quantitative trait loci of arthritis in rat: genes and polymorphisms. Xiong Q, etal., J Immunol. 2008 Jul 15;181(2):859-64.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
7499834LOC102548450uncharacterized LOC1025484504146564239146568426Rat
1562113Cideccell death-inducing DFFA-like effector c4146569288146582173Rat
2319333Apoo-ps2apolipoprotein O, pseudogene 24146587525146589978Rat
1565488Jagn1jagunal homolog 14146591577146596287Rat
41402055LOC120102752U2 spliceosomal RNA4146594912146595102Rat
735148Il17reinterleukin 17 receptor E4146604547146618206Rat
1306392Il17rcinterleukin 17 receptor C4146618321146631444Rat
1309412Creld1cysteine-rich with EGF-like domains 14146631883146641493Rat
1562419Prrt3proline-rich transmembrane protein 34146641173146650487Rat
1311566Emc3ER membrane protein complex subunit 34146663065146678976Rat
1303172Fancd2FA complementation group D24146679014146743422Rat
1565997Fancd2osFANCD2 opposite strand4146740863146747547Rat
1598136Brk1BRICK1 subunit of SCAR/WAVE actin nucleating complex4146750821146766050Rat
3960Vhlvon Hippel-Lindau tumor suppressor4146772483146779376Rat
1309584Irak2interleukin-1 receptor-associated kinase 24146786004146842615Rat
41146337LOC120102364uncharacterized LOC1201023644146787484146795910Rat
1586017Tatdn2TatD DNase domain containing 24146845156146865708Rat
632283Ghrlghrelin and obestatin prepropeptide4146865712146869621Rat
1359555Sec13SEC13 homolog, nuclear pore and COPII coat complex component4146877739146891130Rat
2176Atp2b2ATPase plasma membrane Ca2+ transporting 24146894602147208060Rat
41203173LOC120102365uncharacterized LOC1201023654147065997147066964Rat
11380647LOC108350745uncharacterized LOC1083507454147262869147277704Rat
628737Slc6a11solute carrier family 6 member 114147297972147413319Rat
620533Slc6a1solute carrier family 6 member 14147448961147482295Rat
7575330LOC102548867uncharacterized LOC1025488674147482960147497153Rat
2830Hrh1histamine receptor H 14147564963147649353Rat
41382729LOC120102366uncharacterized LOC1201023664147575390147578136Rat
40972096LOC120102367endogenous retrovirus group K member 21 Env polyprotein-like4147699712147708407Rat
1304817Atg7autophagy related 74147718663147925656Rat
41039995LOC120102368uncharacterized LOC1201023684147735944147739532Rat
1311653Vgll4vestigial-like family member 44147925630148038519Rat
41261845LOC120102369uncharacterized LOC1201023694147944627147947997Rat
1586150Tamm41TAM41 mitochondrial translocator assembly and maintenance homolog4148070388148103728Rat
3798Syn2synapsin II4148178846148347010Rat
2319464Edf1-ps2endothelial differentiation-related factor 1, pseudogene 24148247091148258212Rat
6491335Tuba1b-ps4tubulin, alpha 1B, pseudogene 44148253286148254718Rat
69077Timp4TIMP metallopeptidase inhibitor 44148306021148312558Rat
41143089LOC120102740small nucleolar RNA SNORA764148319434148319561Rat
3371Ppargperoxisome proliferator-activated receptor gamma4148423102148548471Rat
1309946Tsen2tRNA splicing endonuclease subunit 24148602805148638219Rat
2320714Mkrn2osMKRN2 opposite strand4148644489148653396Rat
1310618Mkrn2makorin, ring finger protein, 24148661529148679580Rat
3531Raf1Raf-1 proto-oncogene, serine/threonine kinase4148679534148740265Rat
41002253LOC120102730small nucleolar RNA SNORA174148787387148787491Rat
1587025Tmem40transmembrane protein 404148791509148819287Rat
620480Cand2cullin-associated and neddylation-dissociated 2 (putative)4148835050148864039Rat
41332887Trnaa-agc42transfer RNA alanine (anticodon AGC) 424148841925148842005Rat
621203Rpl32ribosomal protein L324148864048148867612Rat
41348576LOC120102637small nucleolar RNA SNORA74148866843148866982Rat
1586985Efcab12EF-hand calcium binding domain 124148869381148892922Rat
1585874Mbd4methyl-CpG binding domain 4 DNA glycosylase4148893049148904833Rat
1311302Ift122intraflagellar transport 1224148905031148975458Rat
3573Rhorhodopsin4148975597148988693Rat
1566236H1f8H1.8 linker histone4148993133148998254Rat
1310796Plxnd1plexin D14149002786149043097Rat
1311909Tmcc1transmembrane and coiled-coil domain family 14149069252149239585Rat
1592944Ssbl1small RNA binding exonuclease protection factor La like 14149078162149079669Rat
735230Washc2cWASH complex subunit 2C4149267851149325850Rat
11384346Rpl9-ps19ribosomal protein L9, pseudogene 194149309307149310333Rat
628707Zfand4zinc finger AN1-type containing 44149327339149399495Rat
1309339Marchf8membrane associated ring-CH-type finger 84149415642149530771Rat
1591759Rpl23al6ribosomal protein L23A like 64149492385149492849Rat
2096Alox5arachidonate 5-lipoxygenase4149531329149578696Rat
41121481Trnap-ggg3transfer RNA proline (anticodon GGG) 34149560503149560583Rat
1333902Or13a1olfactory receptor family 13 subfamily A member 14149602129149610213Rat
1333048Or6d12olfactory receptor family 6 subfamily D member 124149648444149649427Rat
1333814Or6d13bolfactory receptor family 6 subfamily D member 13B4149673586149674569Rat
1332818Or6d13olfactory receptor family 6 subfamily D member 134149696014149696997Rat
1332631Or6d12bolfactory receptor family 6 subfamily D member 12B4149717772149718755Rat
1586016Hsp90aa1-ps14heat shock protein 90 alpha family class A member 1, pseudogene 144149745787149748099Rat
1333047Or6d13colfactory receptor family 6 subfamily D member 13C4149752294149753277Rat
1585993Ppp1r15b-ps1protein phosphatase 1, regulatory subunit 15B, pseudogene 14149756752149759826Rat
1332875Or6d12colfactory receptor family 6 subfamily D member 12C4149777747149778730Rat
1334034Or6d14olfactory receptor family 6 subfamily D member 144149793474149794436Rat
1333628Or6d15olfactory receptor family 6 subfamily D member 154149818596149819528Rat
1333171Or6d15bolfactory receptor family 6 subfamily D member 15B4149839430149840362Rat
11489696Trnac-gca29transfer RNA cysteine (anticodon GCA) 294149848557149848628Rat
620229Zfp422zinc finger protein 4224149885805149893287Rat
1307785Rassf4Ras association domain family member 44149897525149932658Rat
1565700Depp1DEPP autophagy regulator 14149910794149913013Rat
1308850Tmem72transmembrane protein 724149946296149973550Rat
41351797LOC120102672small nucleolar RNA SNORA174150004608150004742Rat
41188358LOC120102768U2 spliceosomal RNA4150054525150054694Rat
1560120Akr1b1-ps2aldo-keto reductase family 1, member B1 (aldose reductase), pseudogene 24150078484150079434Rat
41392789C4h9orf85similar to human chromosome 9 open reading frame 854150205867150206875Rat
11463298LOC108350876uncharacterized LOC1083508764150306396150319990Rat
3651Cxcl12C-X-C motif chemokine ligand 124150388326150401173Rat
41354715LOC120102371uncharacterized LOC1201023714150423574150431401Rat
7749382LOC102548743uncharacterized LOC1025487434150498770150548561Rat
40976786LOC120102649small nucleolar RNA SNORA484150527373150527515Rat
1596703Ube2m-ps1ubiquitin-conjugating enzyme E2M, pseudogene 14150686815150745259Rat
41109424LOC120102372uncharacterized LOC1201023724150812902150819415Rat
1563294Eno1-ps20enolase 1, pseudogene 204150927402150929143Rat
41340890LOC120102373uncharacterized LOC1201023734150943127150952907Rat
1559850Zfp637zinc finger protein 6374150984940151010079Rat
41401598LOC120102374uncharacterized LOC1201023744150988154150999023Rat
6502210Zfp239zinc finger protein 2394151029431151039283Rat
41036133LOC120102375uncharacterized LOC1201023754151066816151075877Rat
620366Hnrnpfheterogeneous nuclear ribonucleoprotein F4151083262151104464Rat
70998Fxyd4FXYD domain-containing ion transport regulator 44151109779151113659Rat
1583233H2az2l1H2A.Z histone variant 2 like 14151152904151153567Rat
41016825LOC120102376uncharacterized LOC1201023764151176337151179656Rat
1305836Rasgef1aRasGEF domain family, member 1A4151187533151267982Rat
1563660Csgalnact2chondroitin sulfate N-acetylgalactosaminyltransferase 24151271774151308856Rat
41347889LOC120102660small nucleolar RNA SNORA174151283431151283559Rat
1597753Dppa3-ps3developmental pluripotency-associated 3, pseudogene 34151323404151325118Rat
3556Retret proto-oncogene4151325969151368176Rat
1597729Polr2l-ps2RNA polymerase II, I and III subunit L, pseudogene 24151425481151425881Rat
1308043Bms1BMS1 ribosome biogenesis factor4151558163151595187Rat
11379695LOC10835075260S ribosomal protein L17 pseudogene4151573137151573717Rat
1561270Zfp248zinc finger protein 2484151605433151630249Rat
2293498Zfp9zinc finger protein 94151638724151656740Rat
41096242LOC120102774U4 spliceosomal RNA4151638871151639012Rat
1310736Ankrd26ankyrin repeat domain containing 264151670604151740032Rat
2245Cacna1ccalcium voltage-gated channel subunit alpha1 C4151764138152379454Rat
1562214Dcp1bdecapping mRNA 1B4152358267152395747Rat
1562038Cacna2d4calcium voltage-gated channel auxiliary subunit alpha2delta 44152408588152521478Rat
1587001Lrtm2leucine-rich repeats and transmembrane domains 24152485863152508248Rat
1307891Adipor2adiponectin receptor 24152524604152588848Rat
41299916LOC120102588U6 spliceosomal RNA4152565797152565884Rat
40959422LOC120102757U2 spliceosomal RNA4152575725152575876Rat
628850Wnt5bWnt family member 5B4152609566152733790Rat
1305523Fbxl14F-box and leucine-rich repeat protein 144152662542152666360Rat
628733Erc1ELKS/RAB6-interacting/CAST family member 14152763664153055724Rat
40986091Timm23-ps6translocase of inner mitochondrial membrane 23, pseudogene 64152877093152878119Rat
7728321Casp6-ps2caspase 6, pseudogene 24153024536153025248Rat
41078896LOC120102377uncharacterized LOC1201023774153055775153064184Rat
9455361LOC103694898COMM domain-containing protein 6 pseudogene4153087395153094324Rat
1304975Rad52RAD52 homolog, DNA repair protein4153106062153128598Rat
621141Wnk1WNK lysine deficient protein kinase 14153128334153253905Rat
9472652Rps12l11ribosomal protein S12 like 114153219586153220023Rat
620552Ninj2ninjurin 24153306439153408618Rat
1584727Rpl4-ps7ribosomal protein L4, pseudogene 74153376053153378932Rat
1561056B4galnt3beta-1,4-N-acetyl-galactosaminyl transferase 34153409019153509019Rat
41205097Trnaa-agc80transfer RNA alanine (anticodon AGC) 804153468859153468931Rat
41105292Trnal-aag13transfer RNA leucine (anticodon AAG) 134153529208153529282Rat
1310710Ccdc77coiled-coil domain containing 774153534184153566059Rat
1305429Kdm5alysine demethylase 5A4153565909153643912Rat
1306559Il17rainterleukin 17 receptor A4153667534153690174Rat
1565302Tmem121btransmembrane protein 121B4153695191153700104Rat
1306557Hdhd5haloacid dehalogenase like hydrolase domain containing 54153701026153753303Rat
11370866LOC108350753uncharacterized LOC1083507534153846873153873689Rat
1564182Cecr2CECR2, histone acetyl-lysine reader4153890310153998078Rat
1590470Slc25a18solute carrier family 25 member 184154000808154021373Rat
735157Atp6v1e1ATPase H+ transporting V1 subunit E14154022358154044486Rat
1306985Bcl2l13Bcl2-like 134154056116154112890Rat
620160BidBH3 interacting domain death agonist4154113198154136353Rat
1359504Mical3microtubule associated monooxygenase, calponin and LIM domain containing 34154152776154353274Rat
1584998Pex26peroxisomal biogenesis factor 264154414332154426954Rat
1566041Tuba8tubulin, alpha 84154440045154456918Rat
40978413LOC120102509uncharacterized LOC1201025094154458546154471554Rat
1359153Usp18ubiquitin specific peptidase 184154471634154499154Rat
7621965LOC102553072uncharacterized LOC1025530724154499466154500917Rat
620788Slc6a13solute carrier family 6 member 134154539246154577784Rat
620255Slc6a12solute carrier family 6 member 124154585386154603750Rat
1593191Iqsec3IQ motif and Sec7 domain ArfGEF 34154610933154707310Rat
1564159Eef1e1-ps2eukaryotic translation elongation factor 1 epsilon 1, pseudogene 24154775536154776601Rat
6490793Vdac2-ps4voltage-dependent anion channel 2, pseudogene 44154880345154881160Rat
2004A2malpha-2-macroglobulin4154897770154947787Rat
1584999Mug1l1murinoglobulin 1 like 14154980279155036688Rat
11453896LOC108350755thymosin beta-10 pseudogene4155001910155003394Rat
1584878Sav1-ps1salvador family WW domain containing protein 1, pseudogene 14155048501155049735Rat
621366Mug1murinoglobulin 14155076270155130051Rat
11450202LOC108350756uncharacterized LOC1083507564155137257155149163Rat
1302962Mug2murinoglobulin 24155164061155236894Rat
1566313Cpamd8C3 and PZP-like, alpha-2-macroglobulin domain containing 84155332827155413098Rat
61978Klrg1killer cell lectin like receptor G14155455465155467301Rat
1359355M6prmannose-6-phosphate receptor, cation dependent4155501080155510219Rat
1309203Phc1polyhomeotic homolog 14155510274155532636Rat
11488957Trnaa-agc5transfer RNA alanine (anticodon AGC) 54155610386155610452Rat
41146352LOC120102380small ubiquitin-related modifier 1-like4155619960155620555Rat
1560851Rimklbribosomal modification protein rimK-like family member B4155664392155706888Rat
1307919Mfap5microfibril associated protein 54155727925155750458Rat
41024371LOC120102557U4 spliceosomal RNA4155771670155771782Rat
1303222Aicdaactivation-induced cytidine deaminase4155774132155783972Rat
41120875Cox7c-ps3Cytochrome c oxidase subunit 7C, pseudogene 34155783930155785243Rat
2133Apobec1apolipoprotein B mRNA editing enzyme catalytic subunit 14155800030155828515Rat
1564178Gdf3growth differentiation factor 34155831572155835953Rat
1310932Dppa3developmental pluripotency-associated 34155851461155854845Rat
1588989Tomm20-ps1translocase of outer mitochondrial membrane 20, pseudogene 14155881523155882431Rat
1303178NanogNanog homeobox4155943737155951116Rat
3706Slc2a3solute carrier family 2 member 34155960944156026000Rat
1565101Foxj2forkhead box J24156047043156073540Rat
620537C3ar1complement C3a receptor 14156074747156084680Rat
1563551Rpl31-ps10ribosomal protein L31, pseudogene 104156096909156097284Rat
1306053Necap1NECAP endocytosis associated 14156103935156119068Rat
40989992Rpl7-ps25ribosomal protein L7, pseudogene 254156171212156172467Rat
1359109Clec4a1C-type lectin domain family 4, member A14156173894156186009Rat
1359528Clec4a3C-type lectin domain family 4, member A34156214030156224818Rat
1359163Clec4a2C-type lectin domain family 4, member A24156262438156321695Rat
1359662Clec4aC-type lectin domain family 4, member A4156340439156434212Rat
1359354Clec4b2C-type lectin domain family 4, member B24156462742156486240Rat
1359505Clec6a-ps1C-type lectin domain family 6, member A, pseudogene 14156539408156559032Rat
1559669Slbp-ps1stem-loop binding protein, pseudogene 14156563058156563967Rat
1303339Clec4dC-type lectin domain family 4, member D4156589591156599279Rat
1359298Clec4eC-type lectin domain family 4, member E4156606927156612911Rat
11516150Eif4e-ps1eukaryotic translation initiation factor 4E, pseudogene 14156653571156657665Rat
1585454Vom2r48vomeronasal 2 receptor, 484156661971156702951Rat
1589986Vom2r49vomeronasal 2 receptor, 494156733978156781086Rat
41401725LOC120102735small nucleolar RNA SNORA174156772988156773105Rat
1566165Vom2r50vomeronasal 2 receptor, 504156801318156823561Rat
1561712Vom2r51vomeronasal 2 receptor, 514156834644156884468Rat
41066520LOC120102683small nucleolar RNA SNORA174156849122156849249Rat
735022Vom2r52vomeronasal 2 receptor, 524156918262156956543Rat
1561715C1s-ps1complement C1s, pseudogene 14157059237157061211Rat
41227954LOC120102684small nucleolar RNA SNORA174157084756157084883Rat
1310382Cd163CD163 molecule4157085080157118470Rat
13079161700013D24RikRIKEN cDNA 1700013D24 gene4157157264157241805Rat
1307612Pex5peroxisomal biogenesis factor 54157270671157296432Rat
9230431LOC10369222160S ribosomal protein L17 pseudogene4157313085157313947Rat
621153Clstn3calsyntenin 34157331494157364769Rat
2319177Zfp42lZinc finger protein 42-like4157344172157345836Rat
7702915LOC102553636uncharacterized LOC1025536364157375080157391503Rat
1302936C1rlcomplement C1r subcomponent like4157394183157410771Rat
41237120LOC120102383uncharacterized LOC1201023834157404793157408561Rat
7639415LOC102553847uncharacterized LOC1025538474157410200157417093Rat
1309091C1rcomplement C1r4157412718157423483Rat
619983C1scomplement C1s4157430249157442438Rat
1310223Lpcat3lysophosphatidylcholine acyltransferase 34157468397157509889Rat
1307665Emg1EMG1 N1-specific pseudouridine methyltransferase4157509258157517540Rat
620203Phb2prohibitin 24157517662157522268Rat
41081789LOC120102747small nucleolar RNA U894157520539157520799Rat
2325407Mir141microRNA 1414157523239157523332Rat
4888590Mir3575microRNA 35754157523652157523766Rat
2325553Mir200cmicroRNA 200c4157523679157523747Rat
620660Ptpn6protein tyrosine phosphatase, non-receptor type 64157526034157550783Rat
2318975Grcc10gene rich cluster, C10 gene4157551276157552924Rat
41213572LOC120102610U7 small nuclear RNA4157552861157552922Rat
61832Atn1atrophin 14157554287157568092Rat
2554Eno2enolase 24157572085157580971Rat
41299711LOC120102384uncharacterized LOC1201023844157572998157576719Rat
1304779Lrrc23leucine rich repeat containing 234157581285157592188Rat
1310854Spsb2splA/ryanodine receptor domain and SOCS box containing 24157613404157615293Rat
3896Tpi1triosephosphate isomerase 14157615283157618813Rat
1308438Usp5ubiquitin specific peptidase 54157619663157634681Rat
1359093Cdca3cell division cycle associated 34157634775157638799Rat
708344Gnb3G protein subunit beta 34157639468157645171Rat
1305699P3h3prolyl 3-hydroxylase 34157646242157662035Rat
1307437Gpr162G protein-coupled receptor 1624157662200157668341Rat
41287307LOC120102385uncharacterized LOC1201023854157663064157665454Rat
2306Cd4Cd4 molecule4157668878157695366Rat
1302990Lag3lymphocyte activating 34157712665157722229Rat
621529Ptmsparathymosin4157722384157726575Rat
1306294Mlf2myeloid leukemia factor 24157739651157744325Rat
1310070Cops7aCOP9 signalosome subunit 7A4157766626157792632Rat
41200147LOC120102584U6 spliceosomal RNA4157772787157772892Rat
40933824LOC120102387uncharacterized LOC1201023874157788553157793531Rat
1304952PianpPILR alpha associated neural protein4157796425157804842Rat
708346Zfp384zinc finger protein 3844157810263157840052Rat
7507389LOC102554095uncharacterized LOC1025540954157831204157851015Rat
1309407Ing4inhibitor of growth family, member 44157841882157850519Rat
1564880Acrbpacrosin binding protein4157851149157864211Rat
1562580Lpar5lysophosphatidic acid receptor 54157870493157883979Rat
40984833Trnap-agg37transfer RNA proline (anticodon AGG) 374157888872157888946Rat
620064Chd4chromodomain helicase DNA binding protein 44157898503157931632Rat
41371508LOC120102389uncharacterized LOC1201023894157913815157921519Rat
40942840Scarna11small Cajal body-specific RNA 114157923016157923151Rat
1304616Nop2NOP2 nucleolar protein4157932731157944462Rat
1308257Iffo1intermediate filament family orphan 14157945075157962302Rat
2661Gapdhglyceraldehyde-3-phosphate dehydrogenase4157962312157967158Rat
1562596Ncapd2non-SMC condensin I complex, subunit D24157968814157992314Rat
41366642Scarna10small Cajal body-specific RNA 104157986558157986885Rat
1306686Mrpl51mitochondrial ribosomal protein L514157991756157994715Rat
3948Vamp1vesicle-associated membrane protein 14158012634158019350Rat
1307893TapbplTAP binding protein-like4158021454158028905Rat
41257034LOC120102390uncharacterized LOC1201023904158028943158032695Rat
1560499Cd27CD27 molecule4158030700158035862Rat
41018919LOC120102626small nucleolar RNA SNORA704158053924158054052Rat
7708239LOC102555545uncharacterized LOC1025555454158058337158075209Rat
1565719Tuba3atubulin, alpha 3A4158075083158083972Rat
1309448Ltbrlymphotoxin beta receptor4158108884158115339Rat
3639Scnn1asodium channel epithelial 1 subunit alpha4158122962158146184Rat
621237Tnfrsf1aTNF receptor superfamily member 1A4158150815158163592Rat
2318544Plekhg6pleckstrin homology and RhoGEF domain containing G64158163443158182628Rat
41268541Rnu6-212RNA, U6 small nuclear 2124158206300158206401Rat
2318Cd9CD9 molecule4158256328158289136Rat
621759Vwfvon Willebrand factor4158360152158491539Rat
1591606Ano2anoctamin 24158514200158855639Rat
41030033LOC120102587U6 spliceosomal RNA4158700406158700512Rat
619728Ntf3neurotrophin 34158914984158984453Rat
7508270LOC102546745uncharacterized LOC1025467454159103806159151760Rat
2322439Psmg4l1proteasome assembly chaperone 4 like 14159216759159217124Rat
2953Kcna5potassium voltage-gated channel subfamily A member 54159354689159358173Rat
41211382LOC120102392uncharacterized LOC1201023924159369156159392659Rat
2949Kcna1potassium voltage-gated channel subfamily A member 14159464223159472905Rat
11411257LOC108350764uncharacterized LOC1083507644159499081159520684Rat
40956031LOC120102765U2 spliceosomal RNA4159526155159526327Rat
62083Kcna6potassium voltage-gated channel subfamily A member 64159542941159576189Rat
9174049Galnt8polypeptide N-acetylgalactosaminyltransferase 84159626438159650327Rat
1307307Ndufa9NADH:ubiquinone oxidoreductase subunit A94159659242159688034Rat
1359735Akap3A-kinase anchoring protein 34159688049159714067Rat
1306800Dyrk4dual specificity tyrosine phosphorylation regulated kinase 44159715658159757660Rat
1597431Rad51ap1RAD51 associated protein 14159759454159772473Rat
1311164Ferry3FERRY endosomal RAB5 effector complex subunit 34159772693159809322Rat
1564885Rps2-ps33ribosomal protein S2, pseudogene 334159815079159815810Rat
1597399Zfand6-ps1zinc finger AN1-type containing 6, pseudogene14159826591159827232Rat
1559795Rps7-ps22ribosomal protein S7, pseudogene 224159831330159832152Rat
620130Fgf6fibroblast growth factor 64159854913159863447Rat
7701270LOC102547991uncharacterized LOC1025479914159882493159889757Rat
620178Fgf23fibroblast growth factor 234159914267159923821Rat
1560038TigarTP53 induced glycolysis regulatory phosphatase4159927136159946077Rat
621083Ccnd2cyclin D24159966883159989261Rat
11455586LOC108350761uncharacterized LOC1083507614160023192160034671Rat
7707214LOC102548180uncharacterized LOC1025481804160164273160173745Rat
2322558Rpl26-ps6ribosomal protein L26, pseudogene 64160278486160278928Rat
41368239LOC120102394uncharacterized LOC1201023944160286011160296415Rat
1561791Parp11poly (ADP-ribose) polymerase family, member 114160298040160344369Rat
1563719Cracr2acalcium release activated channel regulator 2A4160428987160517427Rat
1587677Prmt8protein arginine methyltransferase 84160535813160618193Rat
7623583LOC102548836uncharacterized LOC1025488364160624391160629130Rat
1305424Tspan11tetraspanin 114160738149160805522Rat
1304740Tspan9tetraspanin 94160813879160995574Rat
93139004930433N12RiklRIKEN cDNA 4930433N12 gene like4161053128161134504Rat
1303230Senp18Sumo1/sentrin/SMT3 specific peptidase 184161066262161067689Rat
7513880Senp2-ps3SUMO specific peptidase 2, pseudogene 34161099569161101683Rat
1303080Senp17Sumo1/sentrin/SMT3 specific peptidase 174161126901161128328Rat
41331827LOC120102399uncharacterized LOC1201023994161154428161164224Rat
6499742Senp2-ps1SUMO specific peptidase 2, pseudogene 14161184094161185484Rat
11421259Senp2-ps9SUMO specific peptidase 2, pseudogene 94161192379161207739Rat
11382743LOC108350768uncharacterized LOC1083507684161192518161214185Rat
41176146LOC120102396sentrin-specific protease 2-like4161243521161247778Rat
1586882Senp2-ps8SUMO specific peptidase 2, pseudogene 84161286038161289049Rat
11392596LOC108350763uncharacterized LOC1083507634161303795161316166Rat
41318674LOC120102398sentrin-specific protease 2-like4161368024161370339Rat
1592312Senp2-ps4SUMO specific peptidase 2, pseudogene 44161394959161398658Rat
1591108Tead4l1TEA domain transcription factor 4 like 14161468780161472861Rat
41381450LOC120102401uncharacterized LOC1201024014161473210161480205Rat
1585671Tead4TEA domain transcription factor 44161474122161572837Rat
1584876Senp2-ps7SUMO specific peptidase 2, pseudogene 74161482938161484893Rat
2318745Ivns1abp-ps1influenza virus NS1A binding protein, pseudogene 14161576440161585763Rat
1585259Tulp3TUB like protein 34161590478161632244Rat
1359404Rhno1RAD9-HUS1-RAD1 interacting nuclear orphan 14161634047161639437Rat
61807Foxm1forkhead box M14161639538161652012Rat
2323784Tex52testis expressed 524161651232161663250Rat
1589959Nrip2nuclear receptor interacting protein 24161673964161684055Rat
1311944Itfg2integrin alpha FG-GAP repeat containing 24161684249161698315Rat
41256239LOC120102402uncharacterized LOC1201024024161698505161701464Rat
628729Fkbp4FKBP prolyl isomerase 44161703379161711833Rat
7574084LOC102554670uncharacterized LOC1025546704161711959161722625Rat
628643Pzppregnancy-zone protein4161759176161805271Rat
1565709A2ml1alpha-2-macroglobulin-like 14161815111161857286Rat
7556630LOC102554736uncharacterized LOC1025547364161878162161881353Rat
1586149Klrb1akiller cell lectin like receptor B1A4161890577161904050Rat
2975Klrb1bkiller cell lectin like receptor B1B4161948259161961537Rat
41273212LOC120102404uncharacterized LOC1201024044162002325162017963Rat
1564464Clec2d2l3C-type lectin domain family 2 member D2 like 34162009857162024626Rat
1562831Clec2d2C-type lectin domain family 2 member D24162059007162071088Rat
6484980LOC100912974uncharacterized LOC1009129744162066864162085023Rat
1588731Clec2d2l1C-type lectin domain family 2 member D2 like 14162099067162107301Rat
1588718Clec2d2l2C-type lectin domain family 2 member D2 like 24162150431162166457Rat
620070Clec2dC-type lectin domain family 2, member D4162216052162239530Rat
7696800Ppp2r5al1protein phosphatase 2, regulatory subunit B', alpha like 14162232814162235046Rat
7635298LOC102549299uncharacterized LOC1025492994162261234162272138Rat
1588698Clec2dl1C-type lectin domain family 2 member D-like 14162263635162274882Rat
1587580Clec2gl1C-type lectin domain family 2, member G like 14162306322162339839Rat
1582927Cbx3l3chromobox 3 like 34162336494162338300Rat
41263594LOC120102406uncharacterized LOC1201024064162360081162367102Rat
1583336Klrb1ckiller cell lectin like receptor B1C4162380773162394688Rat
1587563Klrb1killer cell lectin like receptor B14162456294162474989Rat
1306865Clec2hC-type lectin domain family 2, member H4162493307162503318Rat
7506429LOC102553980ankyrin repeat domain-containing protein 13C-like4162511274162515628Rat
1587527Clec2eC-type lectin domain family 2, member E4162533853162540608Rat
2318170LOC100362418killer cell lectin-like receptor subfamily B member 1C4162565111162569981Rat
40964815LOC120102617U7 small nuclear RNA4162603035162603097Rat
1587506Rhox5-ps1Rhox homeobox family member 5, pseudogene 14162614042162615965Rat
1563148Clec2gC-type lectin domain family 2, member G4162617827162627699Rat
6500959LOC100909928uncharacterized LOC1009099284162669862162675001Rat
61318Cd69Cd69 molecule4162725446162733364Rat
1564770Clec2mC-type lectin domain family 2, member M4162768988162779951Rat
1592991Clec12aC-type lectin domain family 12, member A4162798125162816757Rat
1584868Chtopl1chromatin target of PRMT1-like 14162804334162805461Rat
1560487Clec12bC-type lectin domain family 12, member B4162827462162843821Rat
1563517Clec1bC-type lectin domain family 1, member B4162847978162856291Rat
1562513Clec9aC-type lectin domain containing 9A4162859742162875742Rat
1566110Clec1aC-type lectin domain family 1, member A4162875360162902571Rat
41389277LOC120102409uncharacterized LOC1201024094162899203162903794Rat
1565140Clec7aC-type lectin domain containing 7A4162902731162913931Rat
620515Olr1oxidized low density lipoprotein receptor 14162926436162949057Rat
1586337Tmem52btransmembrane protein 52B4162954025162959220Rat
7702000LOC102554909uncharacterized LOC1025549094162965380162980260Rat
1596143Gabarapl1GABA type A receptor associated protein like 14162980309162989452Rat
727903Klre1killer cell lectin like receptor E14163033581163041641Rat
2978Klrd1killer cell lectin like receptor D14163044920163056568Rat
3180Klrk1killer cell lectin like receptor K14163079887163092434Rat
1560637Klrc3killer cell lectin like receptor C34163105081163112737Rat
2977Klrc2killer cell lectin like receptor C24163122700163133843Rat
2976Klrc1killer cell lectin like receptor C14163142142163152425Rat
2323822Hax1-ps6HCLS1 associated protein X-1, pseudogene 64163166259163180255Rat
1359344Klri1killer cell lectin-like receptor family I member 14163183675163218903Rat
2318121Hax1-ps4HCLS1 associated protein X-1, pseudogene 44163249103163250300Rat
1359205Klri2killer cell lectin-like receptor family I member 24163252844163261484Rat
621452Klrh1killer cell lectin-like receptor subfamily H, member 14163288228163301977Rat
1585190Klra4killer cell lectin-like receptor, subfamily A, member 44163319139163340140Rat
1585178Klra5-ps3killer cell lectin-like receptor, subfamily A, member 5, pseudogene 34163368684163389413Rat
1585167Ly49si4immunoreceptor Ly49si44163428619163455232Rat
1359669Ly49si3immunoreceptor Ly49si34163480531163502045Rat
151664697LOC124459649killer cell lectin-like receptor subfamily A, member 12-like4163514585163532015Rat
1359487Ly49si1immunoreceptor Ly49si14163586930163600528Rat
41142959Ly49si3l1immunoreceptor Ly49si3 like 14163619289163643091Rat
1359240Ly49si2immunoreceptor Ly49si24163672025163845961Rat
1585116Ly49si4-ps1immunoreceptor Ly49si4, pseudogene 14163724510163782315Rat
1584856Ly49si1l1immunoreceptor Ly49si1 like 14163805956163825355Rat
2291887Klra17killer cell lectin-like receptor, subfamily A, member 174163837392163865260Rat
41302964Trnav-aac43transfer RNA valine (anticodon AAC) 434163876371163876443Rat
1584041Ly49s5l1Ly49 stimulatory receptor 5 like 14163894571163906310Rat
1359728Ly49s5Ly49 stimulatory receptor 54163937897163960288Rat
1359210Ly49i5Ly49 inhibitory receptor 54163983731164009424Rat
3023Klra22killer cell lectin-like receptor subfamily A, member 224164036378164057805Rat
1549735Ly49s6Ly49 stimulatory receptor 64164080442164104904Rat
1549723Ly49s4Ly49 stimulatory receptor 44164122071164144931Rat
1549758Ly49i4Ly49 inhibitory receptor 44164166784164188380Rat
1591115Klra4-ps2killer cell lectin-like receptor, subfamily A, member 4, pseudogene 24164214032164242000Rat
6495905Klra5-ps2killer cell lectin-like receptor, subfamily A, member 5, pseudogene 24164316495164341600Rat
1359730Ly49i3Ly49 inhibitory receptor 34164362028164384325Rat
628669Ly49i2Ly49 inhibitory receptor 24164470840164495461Rat
41004740Klra4-ps1killer cell lectin-like receptor, subfamily A, member 4, pseudogene 14164528494164548811Rat
1359586Klra1killer cell lectin-like receptor, subfamily A, member 14164606626164628406Rat
11433693LOC108350824peptidyl-prolyl cis-trans isomerase D pseudogene4164692297164694617Rat
1562972Ly49s8Ly49 stimulatory receptor 84164697264164721302Rat
735134Klra5killer cell lectin-like receptor, subfamily A, member 54164761839164824367Rat
1359503Ly49s7Ly49 stimulatory receptor 74164761847164779735Rat
1359302Ly49i7Ly49 inhibitory receptor 74164853287164871902Rat
1359667Klra2killer cell lectin-like receptor, subfamily A, member 24164873735164985429Rat
11458448LOC108350878uncharacterized LOC1083508784164985838165011361Rat
40937429LOC120102664small nucleolar RNA SNORA174165020142165020273Rat
1597384Magohbmago homolog B, exon junction complex subunit4165034131165041977Rat
1564211Styk1serine/threonine/tyrosine kinase 14165047613165097890Rat
621056Ybx3Y box binding protein 34165129747165153101Rat
41039852LOC120102625small nucleolar RNA SNORA704165144932165145065Rat
1597362Lpal2lipoprotein(a) like 24165207378165264321Rat
1597354Tas2r130taste receptor, type 2, member 1304165272827165273765Rat
620736Tas2r107taste receptor, type 2, member 1074165299663165300589Rat
2314260Tas2r106taste receptor, type 2, member 1064165313210165314133Rat
2314259Tas2r104taste receptor, type 2, member 1044165335957165336865Rat
620741Tas2r105taste receptor, type 2, member 1054165354682165355611Rat
620737Tas2r114taste receptor, type 2, member 1144165358191165359120Rat
1584874Nudc-ps1nuclear distribution C, dynein complex regulator, pseudogene 14165491141165492129Rat
628796Prb1proline-rich protein BstNI subfamily 14165508927165512393Rat
628797Prpmp5proline-rich protein MP54165537147165540256Rat
620386Prb3proline-rich protein BstNI subfamily 34165564424165569229Rat
1305082Prp2proline rich protein 24165600085165603662Rat
1596089Prp2l2proline rich protein 2 like 24165672249165675160Rat
1559532Prp25l1acidic proline-rich protein 25-like 14165737710165740324Rat
41367052LOC120093139acidic proline-rich protein PRP25-like4165774396165776501Rat
41123928Prp25acidic proline-rich protein 254165802821165805103Rat
3413Prp15proline-rich protein 154165828456165832004Rat
40972614LOC120102183proline-rich protein 2-like4165878329165880711Rat
41198727Pam-ps1peptidylglycine alpha-amidating monooxygenase, pseudogene 14165903774165908067Rat
1306750Glalgliadoralin-A like4165928441165931317Rat
1596060Tas2r120taste receptor, type 2, member 1204165952266165953153Rat
620738Tas2r121taste receptor, type 2, member 1214165987429165988346Rat
2323698Tas2r122l-ps1taste receptor, type 2, member 122 like, pseudogene 14166000949166001846Rat
1596038Tas2r124taste receptor, type 2, member 1244166030544166031473Rat
1564838Tas2r102taste receptor, type 2, member 1024166042808166043851Rat
2322480Tas2r124-ps1taste receptor, type 2, member 124, pseudogene 14166073129166074058Rat
620740Tas2r13taste receptor, type 2, member 134166078913166079857Rat
2314262Tas2r136taste receptor, type 2, member 1364166098848166099840Rat
2314258Tas2r117taste receptor, type 2, member 1174166106800166107756Rat
1594689Tas2r109taste receptor, type 2, member 1094166114120166115082Rat
2324836Tas2r145taste receptor, type 2, member 1454166138007166138957Rat
2314257Tas2r129taste receptor, type 2, member 1294166144657166145619Rat
1596030Tas2r125taste receptor, type 2, member 1254166188550166189485Rat
2314255Tas2r113taste receptor, type 2, member 1134166210496166211425Rat
7566935Tas2r116-ps1taste receptor, type 2, member 116, pseudogene 14166243677166244658Rat
2314263Tas2r110taste receptor, type 2, member 1104166252371166253372Rat
2314261Tas2r116taste receptor, type 2, member 1164166266984166267958Rat
727880Tas2r123taste receptor, type 2, member 1234166276923166277924Rat
2314265Tas2r103taste receptor, type 2, member 1034166297968166333604Rat
1587511Tas2r140taste receptor, type 2, member 1404166323842166324780Rat
2322729Smim10l1small integral membrane protein 10 like 14166341699166345530Rat
11501436LOC108350777uncharacterized LOC1083507774166431911166436571Rat
2323199LOC100363344SMR2 protein-like4166474153166476399Rat
619775Prh1proline rich protein HaeIII subfamily 14166543755166547614Rat
735181Prr4proline rich 44166605104166608903Rat
9072808LOC103692262zinc finger HIT domain-containing protein 3 pseudogene4166654362166660847Rat
2947Kapkidney androgen regulated protein4166674595166677639Rat
2322992Esd-ps2esterase D, pseudogene 24166689082166693523Rat
2322840Rplp2-ps2ribosomal protein lateral stalk subunit P2, pseudogene 24166702138166703247Rat
1559537Etv6ETS variant transcription factor 64166849031167085211Rat
41337965LOC120102413uncharacterized LOC1201024134166994319167000861Rat
41193953LOC120102686small nucleolar RNA SNORA174167111232167111361Rat
1562777Bcl2l14Bcl2-like 144167217561167258723Rat
1304749Lrp6LDL receptor related protein 64167269856167400364Rat
7637027LOC102551409uncharacterized LOC1025514094167415371167419796Rat
1593458Mansc1MANSC domain containing 14167438817167459047Rat
1307624Borcs5BLOC-1 related complex subunit 54167458640167543556Rat
1310721Dusp16dual specificity phosphatase 164167546780167630173Rat
1309502Crebl2cAMP responsive element binding protein-like 24167673359167699299Rat
11403894LOC108350781uncharacterized LOC1083507814167701118167722927Rat
71045Gpr19G protein-coupled receptor 194167710944167739232Rat
69062Cdkn1bcyclin-dependent kinase inhibitor 1B4167760067167765177Rat
1303123Apold1apolipoprotein L domain containing 14167768437167825706Rat
9450947LOC103692240proteasome maturation protein pseudogene4167788500167790946Rat
1310437Ddx47DEAD-box helicase 474167845652167858115Rat
1310804Gprc5aG protein-coupled receptor, class C, group 5, member A4167903542167922276Rat
1563887Gprc5dG protein-coupled receptor, class C, group 5, member D4167943523167955616Rat
40952068Rps17-ps7ribosomal protein S17, pseudogene 74167958242167960696Rat
1304581Hebp1heme binding protein 14167974316168003854Rat
40994149LOC120102674small nucleolar RNA SNORA174167986914167987036Rat
1306151Fam234bfamily with sequence similarity 234, member B4168048313168124017Rat
1306546Gsg1germ cell associated 14168090773168107039Rat
621707Pbp2phosphatidylethanolamine binding protein 24168155827168157121Rat
2552Emp1epithelial membrane protein 14168212901168233039Rat
41091302LOC120102631small nucleolar RNA SNORA36 family4168442805168442931Rat
2738Grin2bglutamate ionotropic receptor NMDA type subunit 2B4168580824169044110Rat
41020684LOC120102418uncharacterized LOC1201024184169043518169049467Rat
41113925Rnu2-63RNA, U2 small nuclear 634169167908169168097Rat
7643284LOC102546865uncharacterized LOC1025468654169287350169292025Rat
9104942LOC103692246uncharacterized LOC1036922464169291491169294099Rat
40953625LOC120102185uncharacterized LOC1201021854169333442169334547Rat
7611210LOC102549638uncharacterized LOC1025496384169369605169385758Rat
1306030Atf7ipactivating transcription factor 7 interacting protein4169385872169471652Rat
1308734Plbd1phospholipase B domain containing 14169472983169529277Rat
2771Gucy2cguanylate cyclase 2C4169568505169649092Rat
1592176H2ajH2A.J histone4169675718169676202Rat
1307911Wbp11WW domain binding protein 114169680984169694431Rat
6488104Smco3l1single-pass membrane protein with coiled-coil domains 3 like 14169692479169702735Rat
1563896C4h12orf60similar to human chromosome 12 open reading frame 604169716821169731532Rat
1560652Smco3single-pass membrane protein with coiled-coil domains 34169719962169728849Rat
1306456Art4ADP-ribosyltransferase 44169740331169751571Rat
3088Mgpmatrix Gla protein4169766290169769612Rat
1565381Erp27endoplasmic reticulum protein 274169804656169821660Rat
1305383ArhgdibRho GDP dissociation inhibitor beta4169822951169841884Rat
70933Pde6hphosphodiesterase 6H4169857793169872969Rat
41299232LOC120102622small nucleolar RNA SNORA62/SNORA6 family4169959215169959370Rat
1562829RergRAS-like, estrogen-regulated, growth-inhibitor4169981634170089777Rat
41320141LOC120102419uncharacterized LOC1201024194170035182170057126Rat
7652118Phb1-ps5prohibitin 1, pseudogene 54170106088170119240Rat
62068Ptproprotein tyrosine phosphatase, receptor type, O4170164071170374790Rat
41236583LOC120102421uncharacterized LOC1201024214170358652170370882Rat
1310590Eps8EGFR pathway substrate 8, signaling adaptor4170388378170486873Rat
1311114Strapserine/threonine kinase receptor associated protein4170646042170660291Rat
1589836Deradeoxyribose-phosphate aldolase4170663689170742469Rat
9400932LOC103692250uncharacterized LOC1036922504170663801170675716Rat
1564925Slc15a5solute carrier family 15, member 54170878021170971620Rat
70927Mgst1microsomal glutathione S-transferase 14171029666171044893Rat
7629242LOC102547371uncharacterized LOC1025473714171213887171219182Rat
1561357Lmo3LIM domain only 34171234686171297677Rat
7617185LOC102547496uncharacterized LOC1025474964171292052171298878Rat
1560971Igbp1bimmunoglobulin (CD79A) binding protein 1b4171528962171530312Rat
7691241LOC102547697uncharacterized LOC1025476974172189038172205487Rat
1560090RerglRERG like4172383688172392778Rat
620231Pik3c2gphosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 gamma4172483752172851623Rat
41306080LOC120102423uncharacterized LOC1201024234172518596172533761Rat
1359567Plcz1phospholipase C, zeta 14172873110172929191Rat
2271Capza3capping actin protein of muscle Z-line subunit alpha 34172929273172930486Rat
11366389LOC108350783uncharacterized LOC1083507834173150183173178895Rat
621175Plekha5pleckstrin homology domain containing A54173333891173503546Rat
41153654LOC120102424uncharacterized LOC1201024244173484566173489427Rat
1307233Aebp2AE binding protein 24173527881173566033Rat
1588635Eef1g-ps3eukaryotic translation elongation factor 1 gamma, pseudogene 34173700496173701775Rat
40961810LOC120102186uncharacterized LOC1201021864173817659173823154Rat
7723672LOC102548769uncharacterized LOC1025487694173860216173882046Rat
41207469LOC120102425uncharacterized LOC1201024254173888010173917457Rat
7682226LOC102548837uncharacterized LOC1025488374173917464173951407Rat
61942Pde3aphosphodiesterase 3A4174172804174443944Rat
628660Slco1c1solute carrier organic anion transporter family, member 1c14174466621174513290Rat
69300Slco1b2solute carrier organic anion transporter family member 1B24174551463174619988Rat
621389Slco1a4solute carrier organic anion transporter family, member 1a44174710004174764810Rat
41302375LOC120102773U4 spliceosomal RNA4174712840174713071Rat
11474695LOC108350790uncharacterized LOC1083507904174780553174786029Rat
3700Slco1a1solute carrier organic anion transporter family, member 1a14174877045174950900Rat
41235421LOC120102719small nucleolar RNA SNORA174174964373174964496Rat
621387Slco1a8solute carrier organic anion transporter family, member 1a84174975119175018640Rat
69304Slco1a6solute carrier organic anion transporter family, member 1a64175072143175107950Rat
70985Slco1a5solute carrier organic anion transporter family, member 1A54175172390175254598Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10048D4Mit202394154902669154902892Ratregion
10049D4Wox161894154896195154896338Ratregion
10266D4Arb41604151805502151805662Ratregion
10267D4Mgh301334151805495151805620Ratregion
10522D4Wox141204157578205157578332Ratregion
10522D4Wox141204157578205157578332Ratregion
10523D4Wox151804157578615157578785Ratregion
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5077314RH1396851984174975217174975415Ratregion
5075970RH1389021714152174992152175163Ratregion
5075198RH1384551894154236687154236876Ratregion
5075210RH1384621294156077849156077978Ratregion
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5077436RH1397552204170388439170388659Ratregion
5077532RH1398101964157992767157993468Ratregion
5079456RH1410082204149912572149912792Ratregion
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5076714RH1393362324158741748158741980Ratregion
5075736RH1387672234150394362150394585Ratregion
7240487D4Kiru901874156124880156125067Ratregion
7240489D4Kiru1512404156191879156192119Ratregion
7240491D4Kiru122054156207922156208127Ratregion
7240493D4Kiru961934156260547156260744Ratregion
7240495D4Kiru551644156684359156684523Ratregion
7240497D4Kiru592494156704822156705071Ratregion
7240499D4Kiru772474156879824156880073Ratregion
7240501D4Kiru802524156955988156956242Ratregion
7240503D4Kiru1112124157431808157432020Ratregion
7240505D4Kiru1121294157444420157444549Ratregion
5076240RH1390612004146860115146860315Ratregion
5079618RH1411061904170389898170390088Ratregion
5077988RH1400772034157839189157839392Ratregion
5078032RH1401032144159688953159689167Ratregion
5078336RH1402821944162569664162569858Ratregion
5078382RH1403091834160816683160816866Ratregion
5079820RH1412221914156118668156118859Ratregion
5077798RH1399662174149399140149399357Ratregion
5078642RH1404631144170660134170660248Ratregion
5078668RH140480904157513016157513106Ratregion
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5079900RH1412672094157944179157944388Ratregion
5079900RH1412672094157944179157944388Ratregion
5078244RH1402271944157961933157962127Ratregion
5078304RH1402631804157423226157423406Ratregion
5078950RH1406462054153253583153253788Ratregion
5080108RH1413872154146756249146756464Ratregion
5080140RH1414072164157059101157059317Ratregion
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5080152RH1414151924146926607146926799Ratregion
5078326RH1402761554157117692157117847Ratregion
5078490RH1403731394154187043154187182Ratregion
5070576RH1345811924166674649166674841Ratregion
5070636RH1346171894149003145149003334Ratregion
5073052RH1372072104157270840157271050Ratregion
5073134RH1372582024161590548161590750Ratregion
5079224RH1408071714159963060159963231Ratregion
5079340RH1409322184162704271162704489Ratregion
5080344RH1415251834162620032162620215Ratregion
5070898RH1347691964154577444154577640Ratregion
5071130RH1349041904159369211159369401Ratregion
5080458RH1415902054162979557162979762Ratregion
5080544RH1416411804174290216174290396Ratregion
5078698RH1404982154168001800168002015Ratregion
5078720RH1405121584157994729157994887Ratregion
5071248RH1349731984146865731146866872Ratregion
5071494RH1351141934162805305162805495Ratregion
5073666RH1375692504148678552148678802Ratregion
5070622RH1346081874146842135146842322Ratregion
5070824RH1347272164151038912151039128Ratregion
5073132RH1372571504146875552146875702Ratregion
5071582RH1351651854148862375148862560Ratregion
5071638RH1351981854153137553153137755Ratregion
5074074RH1378052104157330724157330934Ratregion
5074106RH1378252034157587179157587382Ratregion
5074106RH1378252034157587179157587382Ratregion
5070872RH1347542184148986484148986702Ratregion
5071062RH1348641804163183827163184748Ratregion
5071188RH1349381814156073235156073416Ratregion
5073368RH1373961874169663011169663198Ratregion
5071864RH1353292034153409493153410013Ratregion
5071974RH1353921984148988325148988523Ratregion
5074316RH1379461504146644529146644679Ratregion
5073532RH1374911804167380681167380861Ratregion
5061732BF4027582434157564318157564561Ratregion
5061732BF4027582434157564318157564561Ratregion
5061834AW5338041704152520941152521112Ratregion
5063442BI2898951864162928904162929090Ratregion
5066692AU0482072864167139913167140199Ratregion
5066766AU0481631764166725382166725785Ratregion
5066766AU0481631764166725609166725785Ratregion
5066838AU0481211604146844318146844478Ratregion
5066840AU0481201654173104191173104353Ratregion
5066970AU0480421874158112657158112846Ratregion
5067370AU0477951194159522587159522823Ratregion
5067538AU0476851634154993866154994029Ratregion
5067894AU0474722284166299097166299318Ratregion
5067960AU0474332174172441839172442021Ratregion
5068100AU0473482824148128231148128508Ratregion
5068322AU0472152094153134671153134880Ratregion
5068442AU0471421714149818355149818526Ratregion
5068552AU0470771864152453894152454080Ratregion
5068614AU0470381394150441157150441303Ratregion
5068616AU0470372104168388066168388109Ratregion
5068670AU0470042214167369840167370061Ratregion
5068708AU046982924157854700157855312Ratregion
5069938AU04639604175083531175084431Ratregion
5069999RH944101914169568529169568720Ratregion
5068776AU0469391794174737736174737915Ratregion
5068868AU0468761364158694785158694918Ratregion
5070087RH944651734146898953146899126Ratregion
5070107RH944771744157670088157670262Ratregion
5068988AU0467991464163627332163627474Ratregion
5068988AU0467991464163845440163845586Ratregion
5070229RH945471594159354800159354959Ratregion
5070253RH94560974169766325169766423Ratregion
5069122AU0467101854168068177168068360Ratregion
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5069162AU0466832764162281975162282247Ratregion
5069826AU0477451854148611979148612164Ratregion
5062034BE1060631754151125063151125238Ratregion
5063604BE1078321964157977269157977465Ratregion
5060614BI2862272054156027504156027709Ratregion
5063834BE1200141534158599853158600006Ratregion
5065604BF4060091984170388878170389076Ratregion
5065704BF4128041464162133172162133318Ratregion
5062588BF4034671194146893959146894078Ratregion
5064430BI3021971584167917238167917396Ratregion
5060058BI2793261924165929741165929933Ratregion
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5060094BF3884741954148010706148010902Ratregion
5060150BI2795041794166607294166607473Ratregion
5060362AW5251901834161635932161636115Ratregion
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5063844BE1200432024174389595174389797Ratregion
5060642BE1041201164172362209172362325Ratregion
5065592BE1094141774154153877154154054Ratregion
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5065726BI3038371924165127705165127897Ratregion
5060820BF3957791244153373363153373487Ratregion
5062596BE1069032064169989172169989378Ratregion
5064450BE1080061604173563877173564037Ratregion
5064466BF3992801814161675753161675934Ratregion
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5062984BE1135491574172486558172486715Ratregion
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5064610BF3994342174148960134148960351Ratregion
5066182BF4139681014162099018162099112Ratregion
5066182BF4139681014162150511162150612Ratregion
5066202AA9980171444156113085156113229Ratregion
5066248PMC126040P12484167759858167760106Ratregion
5061214BE1112172074171129735171129942Ratregion
5061224BE0993401544167517550167517704Ratregion
5061268BE0994951844174439214174439398Ratregion
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5063008BI2957141304154606198154606328Ratregion
5064632BE1082281924161653721161653913Ratregion
5066288PMC137548P14844158915357158915841Ratregion
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5061420BE1051331574157993998157994155Ratregion
5066544AU0482941294148574601148574732Ratregion
5061568BF4020661974149193719149193916Ratregion
5082095BF4094731204161701971161702091Ratregion
5086303BM3870001584167084658167084816Ratregion
5086305AW5297641784152573992152574170Ratregion
5087038AA8006511974162232974162233171Ratregion
5082427BE1193692054152046482152046687Ratregion
5086463BM3871921894149541066149541255Ratregion
5087658D4Won312394163524459163524674Ratregion
5087658D4Won312394163743676163743915Ratregion
5087668D4Won472954155577738155578033Ratregion
5087672D4Won563484157663658157664006Ratregion
5087676D4Won721574161492893161493050Ratregion
5087876Gabt41954147415271147415466Ratregion
5088100Slc2a31224155962997155963119Ratregion
5082869BI2812982114166546064166546275Ratregion
5087390AA9263151894153575145153575334Ratregion
5087482PMC20739P22044159470926159471130Ratregion
5087869Fgf61694159854977159855146Ratregion
5087893Gpr191594167711156167711315Ratregion
5087901Grin2b1814168600099168600280Ratregion
5089167AU0489951204164073774164073894Ratregion
5089949AU0494601664168116835168117001Ratregion
5083207BI2753381194153405832153405951Ratregion
5083319BF4177811384148621699148621837Ratregion
5088086Ret1074151329531151329638Ratregion
5088179AU0484141844155938174155938360Ratregion
5089249AU0490441504166878412166878562Ratregion
5089421AU0491462004154066032154066232Ratregion
5089505AU0491952554158822360158822615Ratregion
5089639AU0492751584167371389167371549Ratregion
5084006AA894050984151051404151051502Ratregion
5081719AI5772672014159713625159713826Ratregion
5081761BE1180781804165126995165127175Ratregion
5084724AI4113872134157619843157620056Ratregion
5084724AI4113872134157619843157620056Ratregion
5090035AU0495111704168532478168532648Ratregion
5090153AU0495822144146602760146602974Ratregion
5084328AA9446032074167785505167785712Ratregion
5087570PMC317217P11384167760599167760737Ratregion
5087660D4Won382604163758268163758472Ratregion
5087660D4Won382604163872437163872697Ratregion
5087664D4Won402624163951117163951379Ratregion
5087666D4Won441414164390955164391027Ratregion
5087670D4Won522184156684151156684369Ratregion
5087674D4Won662474160065379160065626Ratregion
5087704Atp2b22774146896756146897034Ratregion
5087807D6H12S2489E7184163084236163084954Ratregion
5087842UniSTS:1429921834157575427157575610Ratregion
5087842UniSTS:1429921834157575427157575610Ratregion
5087974UniSTS:1436521154159470836159470951Ratregion
5082459BE1194731514149885137149885288Ratregion
5085329BQ2099742084152514192152514400Ratregion
5090749AU0499402394169461417169461659Ratregion
5090855AU0500061124151065250151065362Ratregion
5080806RH1417932124151007590151007802Ratregion
5080862RH1418262034168088154168088357Ratregion
5090613AU0498571314147265968147266101Ratregion
5081088RH1419582194170374393170374612Ratregion
5081128RH1419812114146861336146861547Ratregion
5081150RH1419931904167856362167856552Ratregion
5081312RH1420871984158163215158163413Ratregion
5085627BM3920902004167943569167943769Ratregion
5082477BI2748091874151277961151278148Ratregion
5082477BI2748091874151277961151278148Ratregion
5082479BI2748231744153410542153410716Ratregion
5086086BM3853282074153324416153324623Ratregion
5080728RH1417471514167718691167718842Ratregion
5084650AI4112731524157526457157526963Ratregion
5086117BM3853941514169474102169474253Ratregion
5084910AI1723912374151605607151605844Ratregion
5085010AI2297721224148619650148619772Ratregion
5083253BF4170761404167257922167258062Ratregion
5083359AA8184831924154022513154022705Ratregion
5081689BF4080771004146865461146865561Ratregion
5083573BI2828331644166546111166546275Ratregion
5086781AA9648031874149002814149003001Ratregion
5086785BM3867391694152525507152525676Ratregion
5086815BE1146561924169967206169967398Ratregion
5081937BF4153551584159406639159406797Ratregion
5083755AI2299832044148431745148431949Ratregion
5083958AI0120881464148868008148868313Ratregion
5502859Cxcl1211194150393531150394650Ratregion
5503621UniSTS:4653894594168601222168601681Ratregion
5502915Ntf310264158915019158916045Ratregion
5502945Wnt5b4204152610063152610483Ratregion
5503780Adipor26544152529079152529735Ratregion
5504147UniSTS:2591961844151842824151843363Ratregion
5503609BARC14504167694247167695912Ratregion
5504510PMC262394P11274146865824146866894Ratregion
5504512PMC262394P304146868795146869548Ratregion
5504436PMC20520P12834155962974155963257Ratregion
5504268G436641284146894612146894740Ratregion
5504288D3S2930E1934146898106146898299Ratregion
5504324D16S2601E1324156135401156135533Ratregion
5504940Mgp1704169766505169767081Ratregion
5505001Lrp63514167373370167373721Ratregion
5504440PMC20739P31894159470941159471130Ratregion
5504580PMC307617P31974167760580167760777Ratregion
5505261Hnrnpf3254151103480151103805Ratregion
5505186Mbd42004148897195148897395Ratregion
5505853UniSTS:495943914167711548167711639Ratregion
5505871UniSTS:495979914151918691151918782Ratregion
5506507RH790891304154034951154035792Ratregion
5506441UniSTS:4792816604149078400149079060Ratregion
5506803G457861164158885090158885206Ratregion
5506861G467981004160129028160129128Ratregion
5507161UniSTS:2248901114155800828155800939Ratregion
5507195UniSTS:2251091094155673578155673688Ratregion
5507215UniSTS:2253131524158914970158915122Ratregion
5500563RH1359991454146663423146663568Ratregion
5502160MARC_7181-7182:996687603:13874157622121157622508Ratregion
5502160MARC_7181-7182:996687603:13874157622121157622508Ratregion
5500178D6Mit1417304147171223147171953Ratregion
5499919UniSTS:2355402764154111853154112129Ratregion
5499921UniSTS:2355561044157970683157970787Ratregion
5499917UniSTS:2355232094146778951146779160Ratregion
5500348GDB:2148402684159854748159855016Ratregion
5502439RH124853904153629839153629929Ratregion
5500621RH1363131874165493585165493772Ratregion
5500392GDB:4354537484159469970159470718Ratregion
5500657RH1365192054157743973157744178Ratregion
5500675RH1366161924155619936155620127Ratregion
5503698MARC_34374-34375:1062687298:14574157931029157931486Ratregion
5503752UniSTS:4698195374148679655148680192Ratregion
5501177PMC152247P17814170114741170115522Ratregion
5501303D8S2817074153162583153162986Ratregion
5504171Raf12614148694134148694684Ratregion
5504490PMC23053P21104146772705146772815Ratregion
5501744MARC_10541-10542:1000149110:104157642135157642688Ratregion
5502096MARC_4161-4162:996679469:12274157519411157520248Ratregion
5502387RH1247021574167760846167761003Ratregion
5502587RH1254422614165491162165491423Ratregion
5502643RH1261382214157744080157744301Ratregion
5502569RH1253521914161706013161706644Ratregion
10755487rs1065535964168368347168368347Ratregion
Position Markers

Flank 1: (D4Mit19)
Rat AssemblyChrPosition (strand)Source
mRatBN7.24146,565,735 - 146,565,864 (+)MAPPER
Rnor_6.04145,373,934 - 145,374,062NCBI
Rnor_5.04208,670,980 - 208,671,108UniSTS
RGSC_v3.44149,304,432 - 149,304,561RGD
RGSC_v3.44149,304,433 - 149,304,561UniSTS
RGSC_v3.14149,549,274 - 149,549,402RGD
Celera4135,122,134 - 135,122,262UniSTS
RH 3.4 Map4950.3UniSTS
RH 3.4 Map4950.3RGD
Cytogenetic Map4 RGD
Peak: (D4Arb2)
Rat AssemblyChrPosition (strand)Source
Celera4154,400,714 - 154,401,111UniSTS
Cytogenetic Map4q42UniSTS
Flank 2: (D4Wox12)
Rat AssemblyChrPosition (strand)Source
mRatBN7.24175,236,234 - 175,236,377 (+)MAPPER
Rnor_6.04176,509,765 - 176,509,907NCBI
Rnor_5.04240,723,308 - 240,723,450UniSTS
RGSC_v3.44179,854,700 - 179,854,843RGD
RGSC_v3.44179,854,701 - 179,854,843UniSTS
RGSC_v3.14180,099,824 - 180,099,967RGD
Celera4163,769,128 - 163,769,270UniSTS
RH 3.4 Map41030.7UniSTS
RH 3.4 Map41030.7RGD
RH 2.0 Map41058.1RGD
Cytogenetic Map4q44UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1582232Gluco25Glucose level QTL 253.60.0023blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)485253748148090731Rat
1358352Srcrt3Stress Responsive Cort QTL 32.29blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)438465774146803430Rat
1582237Kidm34Kidney mass QTL 3440.0001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)4148090542168069246Rat
61446Coreg2Compensatory renal growth QTL 23.5kidney mass (VT:0002707)compensatory renal growth score (CMO:0001894)4148423102157580971Rat
1300116Hrtrt5Heart rate QTL 53.76heart pumping trait (VT:2000009)heart rate (CMO:0000002)4116179486151161268Rat
6478693Anxrr32Anxiety related response QTL 320.00092locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4144639524182687754Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)426775591168368347Rat
631683Bp116Blood pressure QTL 1160.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)4124303370169303370Rat
61451Ciaa4CIA Autoantibody QTL 43.1blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)4126395976167139601Rat
1331738Bp209Blood pressure QTL 2092.979arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)4138503169179293946Rat
6478700Anxrr33Anxiety related response QTL 330.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4144639524182687754Rat
1549827Scl46Serum cholesterol level QTL 463.5blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)4132396220177396220Rat
731165Uae21Urinary albumin excretion QTL 212.40.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)4106649412151649412Rat
737821Hcar9Hepatocarcinoma resistance QTL 93.7liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)4109866907167139601Rat
7411558Bw133Body weight QTL 13313.840.001body mass (VT:0001259)body weight gain (CMO:0000420)4125590636170590636Rat
10401796Kidm48Kidney mass QTL 48kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)4145568712182687754Rat
6478718Anxrr34Anxiety related response QTL 340.00896locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4144639524182687754Rat
1581574Eae20Experimental allergic encephalomyelitis QTL 207.8nervous system integrity trait (VT:0010566)percentage of study population developing experimental autoimmune encephalomyelitis during a period of time (CMO:0001047)4153031106158841762Rat
1300109Rf13Renal function QTL 133.91renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)4157710145182687754Rat
1549832Bss3Bone structure and strength QTL 311femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)4109827074154827074Rat
70177Xhs1X-ray hypersensitivity QTL 125.1intestine integrity trait (VT:0010554)post-insult time to onset of moribundity (CMO:0001896)482798864152731274Rat
731178Oia7Oil induced arthritis QTL 70.0001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4156050654157232313Rat
2303623Vencon2Ventilatory control QTL 23.8respiration trait (VT:0001943)minute ventilation (CMO:0000132)4135204660180204660Rat
1578674Bmd12Bone mineral density QTL 123.8femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)4135699135180699135Rat
1354660Salc1Saline consumption QTL 111.26drinking behavior trait (VT:0001422)saline drink intake rate (CMO:0001627)444463908148090542Rat
1298082Stresp4Stress response QTL 4blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)450119848146803430Rat
737978Pia23Pristane induced arthritis QTL 235.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4131730738167139601Rat
61362Oia2Oil induced arthritis QTL 20.001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4138503169173369699Rat
70201Gcr1Gastric cancer resistance QTL 12.7stomach morphology trait (VT:0000470)stomach tumor susceptibility score (CMO:0002043)4120260281147278687Rat
70200Alc18Alcohol consumption QTL 189.2drinking behavior trait (VT:0001422)ethanol intake volume to total fluid intake volume ratio (CMO:0001591)456647873149491524Rat
2293659Bmd35Bone mineral density QTL 354.50.0001femur strength trait (VT:0010010)femoral neck ultimate force (CMO:0001703)4137755016181392681Rat
1331759Hrtrt13Heart rate QTL 133.54628heart pumping trait (VT:2000009)heart rate (CMO:0000002)4110275411168266883Rat
724535Cm18Cardiac mass QTL 182.6heart mass (VT:0007028)calculated heart weight (CMO:0000073)4118856416163856416Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)411320076180699135Rat
6478754Anxrr43Anxiety related response QTL 430.14035locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4144639524182687754Rat
2302049Pia32Pristane induced arthritis QTL 325.10.001blood autoantibody amount (VT:0003725)serum immunoglobulin G-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002112)4105789505150789505Rat
724558Plsm2Polydactyly-luxate syndrome (PLS) morphotypes QTL 20.0003hindlimb integrity trait (VT:0010563)hind foot phalanges count (CMO:0001949)4132422778177422778Rat
6478763Anxrr46Anxiety related response QTL 460.07428locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4110870972155870972Rat
6478760Anxrr45Anxiety related response QTL 450.06717locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4110870972155870972Rat
1331802Srn5Serum renin concentration QTL 53.045renin activity (VT:0005581)plasma renin activity level (CMO:0000116)4119428175157578333Rat
1298524Oia8Oil induced arthritis QTL 8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4138503169173369699Rat
10053718Scort25Serum corticosterone level QTL 252.150.0097blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)4155561574182687754Rat
738009Sach4Saccharine consumption QTL 44.90.000016consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)459948935154902892Rat
2312567Glom19Glomerulus QTL 191.90.006kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)445456990146803430Rat
7207480Bss105Bone structure and strength QTL 1058.1femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)4109827074154827074Rat
634335Anxrr16Anxiety related response QTL 167.22locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)493308457167139447Rat
6478778Anxrr51Anxiety related response QTL 510.25384locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4124778595169778595Rat
631511Pia7Pristane induced arthritis QTL 74.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4131730738167139601Rat
61406Scwia1Streptococcal cell wall induced arthritis QTL 12.3joint integrity trait (VT:0010548)experimental arthritis severity measurement (CMO:0001459)4106805662151805662Rat
1354612Foco1Food consumption QTL 18.87eating behavior trait (VT:0001431)food intake rate (CMO:0000427)444463908148090542Rat
634347Hcar8Hepatocarcinoma resistance QTL 85.8liver integrity trait (VT:0010547)liver tumorous lesion area to total liver area ratio (CMO:0001075)4123143783168143783Rat
738031Alc14Alcohol consumption QTL 147.60.00003consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)459948935154902892Rat
1576316Ept5Estrogen-induced pituitary tumorigenesis QTL 53.8pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)483428419177635233Rat
1581566Eae21Experimental allergic encephalomyelitis QTL 216.2body mass (VT:0001259)maximum body weight loss to initial body weight ratio (CMO:0001400)4157680158158841762Rat
1576305Emca6Estrogen-induced mammary cancer QTL 65.8mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)444463720155883716Rat
738016Alc16Alcohol consumption QTL 163.60.00015consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)459948935154902892Rat
1358202Gluco11Glucose level QTL 112.40.02adipocyte glucose uptake trait (VT:0004185)absolute change in adipocyte glucose uptake (CMO:0000873)485379421167139601Rat
61422Cia13Collagen induced arthritis QTL 134.5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4132642577167139601Rat
634342Cia24Collagen induced arthritis QTL 244.5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4146565735175236377Rat
2293840Kiddil9Kidney dilation QTL 92.9kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)4120926564148090731Rat
631674Iddm14Insulin dependent diabetes mellitus QTL 14blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)464528739157573521Rat
12798519Anxrr54Anxiety related response QTL 542.540.05locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4114627026159627026Rat
12798523Anxrr56Anxiety related response QTL 562.830.05locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)485253748150276390Rat
61434Cia3Collagen induced arthritis QTL 34.8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4103194656148194656Rat
12798527Anxrr58Anxiety related response QTL 584.110.05locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4119463257147278687Rat
6478748Anxrr42Anxiety related response QTL 420.28008locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4144639524182687754Rat
12798525Anxrr57Anxiety related response QTL 573.210.05locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4147278504167139601Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Cia24


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-04-14 Cia24  Collagen induced arthritis QTL 24    Type II Collagen induced arthritis QTL 24  Name updated 1299863 APPROVED

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_disease homologous to a region of mouse chromosome 6, linked to CIA, systemic lupus erythematosus, and spontaneous diabetes; syntenic to the human chromosome 12p13.2 region, a suggestive locus in RA 61066
qtl_gene whole genome analysis using PGMapper revealed Cd69,Cxcl12, Cls, Clr, Il17ra, Il17re, Il17rc as RA associated genes 2300074
qtl_gene 637 known and 152 novel genes were found in an analysis based on PubMed and OMIM data 2307198
qtl_general associates with the increase of arthritis severity than that of BN 61066
qtl_general overlaps with Oia2 which mediates oil induced arthritis in (DA 3 LEW.1Av1) rats, and a QTL associated with IgG1 and IgE antibody production in the rat MOG-induced EAE model 61066