Cm9 QTL Report (Rattus norvegicus) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Behavioral & Substance Use Disorder Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
QTL Registration

QTL: Cm9 (Cardiac mass QTL 9) Rattus norvegicus

Symbol: Cm9
Name: Cardiac mass QTL 9
RGD ID: 631678
Previously known as: Bp111; Blood pressure QTL 111
Trait: aorta mass   (VT:0002845)    
Measurement Type: aorta weight   (CMO:0000076)    
LOD Score: 4.27
P Value: 1.0E-4
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2191 - 28,982,497RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0191 - 29,558,305RGD_MAPPER_PIPELINERnor_6.0
Rnor_5.0191 - 29,550,005RGD_MAPPER_PIPELINERnor_5.0
RGSC_v3.4191 - 29,295,214RGD_MAPPER_PIPELINERGSC_v3.4
RGSC_v3.1190 - 29,300,041RGD
Cross Type: Not Available
Strains Crossed: SS/JrRkb SHR/FubRkb 



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement
aorta weight  (IDA)

Experimental Condition

Measurement Method

Vertebrate Trait
aorta mass  (IDA)

Rat Strain
SHR/FubRkb  (IEA)
SS/JrRkb  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Genetic Loci contribute to the progression of vascular and cardiac hypertrophy in salt-sensitive spontaneous hypertension. Siegel AK, etal., Arterioscler Thromb Vasc Biol 2003 Jul 1;23(7):1211-7.
Related QTLs

Related QTL Description Reference
Cm12 maps to same region RGD:629621


Region

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
Position Markers

Peak: (D19Rat18)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2196,482,418 - 6,482,577 (+)MAPPER
Rnor_6.0197,058,226 - 7,058,384NCBI
Rnor_5.0197,049,926 - 7,050,084UniSTS
RGSC_v3.4196,795,135 - 6,795,294RGD
RGSC_v3.4196,795,136 - 6,795,294UniSTS
Celera196,430,373 - 6,430,531UniSTS
RGSC_v3.1196,799,962 - 6,800,120RGD
RH 3.4 Map1942.1RGD
RH 3.4 Map1942.1UniSTS
RH 2.0 Map1938.5RGD
SHRSP x BN Map192.1999RGD
FHH x ACI Map191.02RGD


Additional Information

Database Acc Id Source(s)
NCBI Gene Cm9


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2004-09-08 Cm9  Cardiac mass QTL 9  Bp111  Blood pressure QTL 111  Symbol and Name updated 1299863 APPROVED

RGD Curation Notes
Note Type Note Reference