Bp94 QTL Report (Rattus norvegicus) - Rat Genome Database

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Pathways

QTL: Bp94 (Blood pressure QTL 94) Rattus norvegicus

Symbol: Bp94
Name: Blood pressure QTL 94
RGD ID: 631570
Trait: arterial blood pressure trait   (VT:2000000)    
Measurement Type: systolic blood pressure   (CMO:0000004)    
LOD Score: Not Available
P Value: 1.0E-4
Variance: Not Available
Inheritance Type: additive
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21123,479,780 - 142,990,467RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01130,917,121 - 152,871,103RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01131,958,920 - 159,182,239RGDRnor5.0
RGSC_v3.41124,748,920 - 145,648,920RGDRGSC3.4
RGSC_v3.11124,827,264 - 145,727,326RGD
Cross Type: backcross
Strains Crossed: SS.LEW-(D1Rat39-D1Rat131)/Jr 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
hypertension  (IDA)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
# Reference Title Reference Citation
1. Multiple blood pressure QTL on rat chromosome 1 defined by Dahl rat congenic strains. Saad Y, etal., Physiol Genomics 2001 Jan 19;4(3):201-14.
2. Closely linked non-additive blood pressure quantitative trait loci. Toland EJ, etal., Mamm Genome. 2008 Mar;19(3):209-18. Epub 2008 Mar 7.
Related QTLs

Related QTL Description Reference
Bp30 interacts with RGD:2291850
Bp314 sub_region RGD:2291850
Bp313 sub_region RGD:2291850
Bp27 interacts with RGD:2291850


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
40976304LOC120100448small nucleolar RNA SNORA171123620368123620504Rat
2323071Dcaf12-ps1DDB1 and CUL4 associated factor 12, pseudogene 11123731057123733750Rat
40931072LOC120099850uncharacterized LOC1200998501123918082123925951Rat
7683637LOC102553173uncharacterized LOC1025531731123943804123994246Rat
69305Nr2f2nuclear receptor subfamily 2, group F, member 21124008282124022521Rat
7661531LOC102553329uncharacterized LOC1025533291124017749124165290Rat
2322933Srsf7-ps1serine and arginine rich splicing factor 7, pseudogene 11124210206124239378Rat
11468718Rpl21-ps25ribosomal protein L21, pseudogene 251124344834124345343Rat
41237530LOC120100125U6 spliceosomal RNA1124419603124419709Rat
40953130LOC12009778560S ribosomal protein L27-like1124728576124728938Rat
41077517LOC120099851uncharacterized LOC1200998511124972989125042272Rat
1562967Mctp2multiple C2 and transmembrane domain containing 21125769932126002886Rat
7698364LOC102553828spermatogenesis-associated protein 13-like1126159731126164254Rat
41088730Trnaa-agc79transfer RNA alanine (anticodon AGC) 791126350554126350634Rat
9191646LOC103691162uncharacterized LOC1036911621126477043126482167Rat
1583787Mif-ps8macrophage migration inhibitory factor, pseudogene 81126777227126777631Rat
7634877LOC102554078uncharacterized LOC1025540781126851551126852404Rat
41344751LOC120099852uncharacterized LOC1200998521126926159126934246Rat
1311983Rgmarepulsive guidance molecule BMP co-receptor a1127128934127172918Rat
1310056Chd2chromodomain helicase DNA binding protein 21127188146127317041Rat
41219816LOC120099853uncharacterized LOC1200998531127336589127338218Rat
40975001LOC120099854uncharacterized LOC1200998541127347845127351622Rat
41143699LOC120099855uncharacterized LOC1200998551127368228127374172Rat
41330022LOC120099856uncharacterized LOC1200998561127413163127418868Rat
1583735Top1-ps1DNA topoisomerase 1, pseudogene 11127423431127432141Rat
9249251LOC103691177histone H2A.Z pseudogene1127473174127484619Rat
1596692Fam174bfamily with sequence similarity 174, member B1127515393127618591Rat
41117170LOC120099857uncharacterized LOC1200998571127569126127570853Rat
41389607Ipmk-ps1inositol polyphosphate multikinase, pseudogene 11127578732127592426Rat
41204376LOC120099858uncharacterized LOC1200998581127620887127636745Rat
1583786Rpl26-ps7ribosomal protein L26, pseudogene 71127659594127660098Rat
621843St8sia2ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 21127762573127838017Rat
41343720LOC120097791uncharacterized LOC1200977911127962107127984875Rat
41241885LOC120100156U1 spliceosomal RNA1128006617128006780Rat
2322257LOC100360396hypothetical protein LOC1003603961128028275128028907Rat
620227Slco3a1solute carrier organic anion transporter family, member 3a11128106232128388043Rat
41257043Actg1-ps11actin, gamma 1, pseudogene 111128530958128550705Rat
41089556Rpl13-ps4ribosomal protein L13, pseudogene 41128596532128600414Rat
619716Sv2bsynaptic vesicle glycoprotein 2b1128978471129152479Rat
727893Akap13A-kinase anchoring protein 131129313183129619647Rat
9322177LOC103691165uncharacterized LOC1036911651129641309129655041Rat
41175336Brix1-ps1biogenesis of ribosomes BRX1, pseudogene 11129680951129683336Rat
1310815Klhl25kelch-like family member 251129724894129750142Rat
11517459LOC10834984960S ribosomal protein L7a pseudogene1129755848129757145Rat
7709422Gapdh-ps69Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 691129758471129759490Rat
6495781LOC10091088860S ribosomal protein L36-like1129764986129765341Rat
41164166LOC120100400small nucleolar RNA SNORA481129979431129979573Rat
11397546LOC108349597uncharacterized LOC1083495971130040995130043791Rat
1560280Agbl1AGBL carboxypeptidase 11130043914130950739Rat
11411641LOC108349814high mobility group protein B1-like1130158350130158821Rat
2316393Vom1r-ps67vomeronasal 1 receptor pseudogene 671131058349131059234Rat
7537804LOC102553800uncharacterized LOC1025538001131429410131442617Rat
41303997LOC120099860uncharacterized LOC1200998601131469335131484623Rat
41138645Rnu1-18RNA, U1 small nuclear 181131845667131845829Rat
7676282LOC102553862uncharacterized LOC1025538621132019641132025235Rat
3214Ntrk3neurotrophic receptor tyrosine kinase 31132116472132503849Rat
41050960LOC120099861uncharacterized LOC1200998611132181245132187438Rat
9468236LOC103691168uncharacterized LOC1036911681132680421132684321Rat
1309123Mrpl46mitochondrial ribosomal protein L461132698872132707639Rat
1559901Mrps11mitochondrial ribosomal protein S111132707601132717253Rat
1309793Det1DET1 partner of COP1 E3 ubiquitin ligase1132749736132765963Rat
41003782LOC120099862uncharacterized LOC1200998621132785368132793311Rat
7500992LOC102547416uncharacterized LOC1025474161132796668132801878Rat
41247581LOC120099863uncharacterized LOC1200998631132800647132808007Rat
2325398Mir8microRNA 81132806420132806514Rat
1305051Aenapoptosis enhancing nuclease1132815094132824522Rat
1306407Isg20interferon stimulated exonuclease gene 201132829303132837027Rat
7742101LOC102547609uncharacterized LOC1025476091132868748132874634Rat
41129480LOC120097803uncharacterized LOC1200978031132925214132928678Rat
41179479LOC120099864uncharacterized LOC1200998641132956992132959786Rat
68358Acanaggrecan1132981582133044416Rat
1308098Hapln3hyaluronan and proteoglycan link protein 31133046465133064665Rat
3083Mfge8milk fat globule EGF and factor V/VIII domain containing1133064665133080069Rat
11436035Rpl27a-ps3ribosomal protein L27a, pseudogene 31133096265133099871Rat
1311389Abhd2abhydrolase domain containing 2, acylglycerol lipase1133217403133298564Rat
40958364LOC120100454U2 spliceosomal RNA1133230750133230898Rat
1309649Rlbp1retinaldehyde binding protein 11133308920133322296Rat
2321863FanciFA complementation group I1133327264133383661Rat
620057PolgDNA polymerase gamma, catalytic subunit1133382764133399578Rat
11503785Trnar-ucg1transfer RNA arginine (anticodon UCG) 11133399712133399784Rat
7692197LOC102547943uncharacterized LOC1025479431133414486133421488Rat
1592552LOC685596similar to ubiquinol-cytochrome c reductase binding protein1133425137133425500Rat
41312538Atp5mpl-ps1ATP synthase membrane subunit 6.8PL, pseudogene 11133428752133429328Rat
7530616Mir9-3hgMir9-3 host gene1133431075133469302Rat
4888559Mir3597-3microRNA 3597-31133440038133440152Rat
2325463Mir9-3microRNA 9-31133440049133440138Rat
41179128LOC120099866uncharacterized LOC1200998661133470652133492131Rat
727859RhcgRh family, C glycoprotein1133531704133555902Rat
41279797Cul4b-ps1cullin 4B, pseudogene 11133574646133575249Rat
41068534LOC120099869uncharacterized LOC1200998691133590983133598028Rat
1308541TicrrTOPBP1-interacting checkpoint and replication regulator1133597618133639513Rat
1310310Kif7kinesin family member 71133639487133658539Rat
41320917Pin4-ps6peptidylprolyl cis/trans isomerase, NIMA-interacting 4, pseudogene 61133647167133647563Rat
40978721LOC120099868uncharacterized LOC1200998681133652575133654456Rat
3351Plin1perilipin 11133664294133676854Rat
619842Pex11aperoxisomal biogenesis factor 11 alpha1133680091133687172Rat
1559862Wdr93WD repeat domain 931133687254133737449Rat
2318883Snrpepl2small nuclear ribonucleoprotein polypeptide E like 21133709656133710137Rat
1311751Mesp1mesoderm posterior bHLH transcription factor 11133738357133739875Rat
1305959Mesp2mesoderm posterior bHLH transcription factor 21133756601133759207Rat
2991Anpepalanyl aminopeptidase, membrane1133767332133810137Rat
1586888Ap3s2adaptor related protein complex 3 subunit sigma 21133818825133859269Rat
1311021Arpinactin-related protein 2/3 complex inhibitor1133864288133873124Rat
41141871LOC120099870uncharacterized LOC1200998701133872984133879902Rat
1306491Zfp710zinc finger protein 7101133966256134036593Rat
1597139Idh2isocitrate dehydrogenase (NADP(+)) 21134038644134057969Rat
1589010Naa38-ps1N(alpha)-acetyltransferase 38, NatC auxiliary subunit, pseudogene 11134093191134093669Rat
7554600LOC102548818uncharacterized LOC1025488181134107741134110798Rat
7638459LOC102548889uncharacterized LOC1025488891134114350134128483Rat
1307872Sema4bsemaphorin 4B1134136646134177777Rat
620133Cib1calcium and integrin binding 11134178331134183895Rat
1560277Gdpgp1GDP-D-glucose phosphorylase 11134184119134193281Rat
7590296LOC102549117uncharacterized LOC1025491171134186182134213438Rat
1310399Ttll13tubulin tyrosine ligase like 131134197801134213083Rat
1583734Ngrnneugrin, neurite outgrowth associated1134213235134219348Rat
620644Vps33bVPS33B, late endosome and lysosome associated1134223967134247232Rat
1311754Prc1protein regulator of cytokinesis 11134250086134271765Rat
41200941LOC120100407small nucleolar RNA SNORA481134251885134252021Rat
1309901Rccd1RCC1 domain containing 11134271870134281556Rat
1305357Unc45aunc-45 myosin chaperone A1134281930134296661Rat
41042766LOC120099871protein shisa-like-1a1134296708134298626Rat
1311839Hddc3HD domain containing 31134299469134301757Rat
11501622LOC10834944660S ribosomal protein L35a pseudogene1134302904134303425Rat
1310238Man2a2mannosidase, alpha, class 2A, member 21134304714134327611Rat
1564385FesFES proto-oncogene, tyrosine kinase1134337698134346934Rat
7565709LOC102553801uncharacterized LOC1025538011134346919134348781Rat
3274Furinfurin (paired basic amino acid cleaving enzyme)1134348142134361182Rat
11462077LOC108349447uncharacterized LOC1083494471134385420134400570Rat
1308810BlmBLM RecQ like helicase1134409832134496073Rat
1309666Crtc3CREB regulated transcription coactivator 31134552830134655929Rat
9396007LOC103691178chromobox protein homolog 3 pseudogene1134672915134675115Rat
1311884Iqgap1IQ motif containing GTPase activating protein 11134679581134769776Rat
1584548Zscan2zinc finger and SCAN domain containing 21134833701134848957Rat
1306429Wdr73WD repeat domain 731134860329134868475Rat
1562710Nmbneuromedin B1134869446134875507Rat
41341028Rpl26l1-ps1ribosomal protein L26-like 1, pseudogene 11134875225134875637Rat
69360Sec11aSEC11 homolog A, signal peptidase complex subunit1134881448134909427Rat
1308705Zfp592zinc finger protein 5921134951286135002443Rat
1309860Alpk3alpha-kinase 31135014455135062294Rat
621223Slc28a1solute carrier family 28 member 11135079375135122791Rat
735125Pde8aphosphodiesterase 8A1135166143135288986Rat
41062554LOC120100372small nucleolar RNA SNORA441135195011135195135Rat
62027Rps17ribosomal protein S171135295920135298506Rat
1310421Cpeb1cytoplasmic polyadenylation element binding protein 11135300048135407688Rat
9383371Snrnp48-ps1small nuclear ribonucleoprotein U11/U12 subunit 48, pseudogene 11135339418135340186Rat
1308950Ap3b2adaptor related protein complex 3 subunit beta 21135412580135445191Rat
7609569LOC102555928uncharacterized LOC1025559281135445291135469930Rat
2321127LOC100360933cDNA sequence BC048679-like1135445623135449427Rat
1305167Fsd2fibronectin type III and SPRY domain containing 21135484002135522517Rat
7489047Scarna15small Cajal body-specific RNA 151135484620135484683Rat
41294589LOC120100468small nucleolar RNA SNORA761135499682135499825Rat
1563506WhammWASP homolog associated with actin, golgi membranes and microtubules1135526363135557091Rat
620705Homer2homer scaffold protein 21135558977135659780Rat
41049822Rnu6-946RNA, U6 small nuclear 9461135620777135620883Rat
1310022RamacRNA guanine-7 methyltransferase activating subunit1135708529135714417Rat
1305713C1h15orf40similar to human chromosome 15 open reading frame 401135725869135732028Rat
1310962Btbd1BTB domain containing 11135734549135773067Rat
1307978Tm6sf1transmembrane 6 superfamily member 11135799844135828515Rat
628773Hdgfl3HDGF like 31135822600135876719Rat
7643677LOC102556513uncharacterized LOC1025565131135894458135909734Rat
1309042Bnc1basonuclin zinc finger protein 11135917676135943333Rat
620578Sh3gl3SH3 domain containing GRB2 like 3, endophilin A31136124500136255669Rat
9089371LOC103691176U6 snRNA-associated Sm-like protein LSm5 pseudogene1136277978136278822Rat
1305155Adamtsl3ADAMTS-like 31136288793136596986Rat
1562653Saxo2stabilizer of axonemal microtubules 21136596445136638444Rat
1306521Efl1elongation factor like GTPase 11136638527136763518Rat
41041741LOC120100361small nucleolar RNA SNORA151136662596136662746Rat
1306790Mex3bmex-3 RNA binding family member B1136855130136859365Rat
41391087LOC120097812uncharacterized LOC1200978121136871425136877196Rat
41110788LOC120099872uncharacterized LOC1200998721136914913136919922Rat
41341971LOC120100412small nucleolar RNA SNORA171136970981136971112Rat
1566271Rpl7-ps20ribosomal protein L7, pseudogene 201137123201137130636Rat
7510373LOC102552825uncharacterized LOC1025528251137282138137284054Rat
41019099LOC120100465U2 spliceosomal RNA1137371689137371783Rat
1308063Tmc3transmembrane channel-like 31137552347137597477Rat
1561783Stard5StAR-related lipid transfer domain containing 51137606151137616017Rat
1583872Il16interleukin 161137617702137718022Rat
40984706Snrpc-ps10small nuclear ribonucleoprotein polypeptide C, pseudogene 101137642550137643027Rat
1310371Cfap161cilia and flagella associated protein 1611137743783137768685Rat
2320729Rchy1-ps1ring finger and CHY zinc finger domain containing 1, pseudogene 11137830459137831886Rat
1311666Tlnrd1talin rod domain containing 11137864340137866359Rat
1310344Mesdmesoderm development LRP chaperone1137866707137879999Rat
1305254Cemipcell migration inducing hyaluronidase 11137906921138062430Rat
1308210Abhd17cabhydrolase domain containing 17C, depalmitoylase1138084632138125595Rat
41188763LOC120099874uncharacterized LOC1200998741138184016138185964Rat
11503776LOC108349102uncharacterized LOC1083491021138189940138213720Rat
2154Arnt2aryl hydrocarbon receptor nuclear translocator 21138236235138392868Rat
7557291Ctxnd1cortexin domain containing 11138495689138547105Rat
61932Fahfumarylacetoacetate hydrolase1138548830138571599Rat
1359317Zfand6zinc finger AN1-type containing 61138581002138652052Rat
41067967Rnu6-891RNA, U6 small nuclear 8911138601694138601800Rat
40982279Pnpla8-ps1patatin-like phospholipase domain containing 8, pseudogene 11138732722138759449Rat
1590363Or5ae2olfactory receptor family 5 subfamily AE member 21138804766138805713Rat
1334373Or5ae1olfactory receptor family 5 subfamily AE member 11138860924138861871Rat
6489367Vmn2r116l-ps26vomeronasal 2, receptor 116 like, pseudogene 261138892454138912931Rat
1626046Vom2r-ps63vomeronasal 2 receptor, pseudogene 631138892457138892798Rat
708406Vom2r40vomeronasal 2 receptor, 401139409429139457552Rat
1641977Vom2r-ps64vomeronasal 2 receptor, pseudogene 641139409799139410704Rat
7573144Vmn2r116l-ps29vomeronasal 2, receptor 116 like, pseudogene 291139496211139515315Rat
1587126Vom2r42vomeronasal 2 receptor, 421139549127139593601Rat
40985241Vmn2r116l-ps15vomeronasal 2, receptor 116 like, pseudogene 151139595637139617784Rat
6485222Vmn2r116l-ps1vomeronasal 2, receptor 116 like, pseudogene 11139671255139673942Rat
1587109LOC679574similar to putative pheromone receptor (Go-VN3)1139696920139763181Rat
1587090Vom2r43vomeronasal 2 receptor, 431139793253139815783Rat
1333584Or13g1olfactory receptor family 13 subfamily G member 11139864790139865713Rat
41189502LOC120099875uncharacterized LOC1200998751139870107139920602Rat
1334399Or6f1olfactory receptor family 6 subfamily F member 11139888779139889705Rat
1332929Or14a260olfactory receptor family 14 subfamily A member 2601139918531139919472Rat
1333967Or14c44b-ps1olfactory receptor family 14 subfamily C member 44B, pseudogene 11139937745139938682Rat
41147859Rpl29-ps8ribosomal protein L29, pseudogene 81139956373139958279Rat
1333647Or14a258olfactory receptor family 14 subfamily A member 2581139960934139961884Rat
1333998Or6aa1olfactory receptor family 6 subfamily A member A11139968839139969795Rat
1333037Or14c44-ps1olfactory receptor family 14 subfamily C member 44, pseudogene 11140004210140005185Rat
6499723Ldha-ps1lactate dehydrogenase A, pseudogene 11140009867140010890Rat
1333281Or6aa1bolfactory receptor family 6 subfamily A member A1B1140016536140017495Rat
6499943Ldha-ps12lactate dehydrogenase A, pseudogene 121140025282140027726Rat
41201666LOC120099876uncharacterized LOC1200998761140041222140055037Rat
1332905Or14n1olfactory receptor family 14 subfamily N member 11140064224140065216Rat
1332817Or14c48-ps1olfactory receptor family 14 subfamily C member 48, pseudogene 11140107028140108065Rat
1334240Or14c43b-ps1olfactory receptor family 14 subfamily C member 43B, pseudogene 11140139131140140070Rat
1332664Or14c43olfactory receptor family 14 subfamily C member 431140171652140172647Rat
2322334Cdca4-ps2cell division cycle associated 4, pseudogene 21140183390140192383Rat
1334267Or14a257dolfactory receptor family 14 subfamily A member 257D1140204646140205587Rat
1333809Or14c40olfactory receptor family 14 subfamily C member 401140234383140235375Rat
1333180Or14e1-ps1olfactory receptor family 14 subfamily E member 1, pseudogene 11140262826140263202Rat
1332768Or14a257olfactory receptor family 14 subfamily A member 2571140276678140277619Rat
9229744LOC10369119360S acidic ribosomal protein P1-like1140289186140294946Rat
41194366LOC120100356U2 spliceosomal RNA1140302978140303142Rat
1334427Or14f1-ps1olfactory receptor family 14 subfamily F member 1, pseudogene 11140305863140306292Rat
1334054Or14a257bolfactory receptor family 14 subfamily A member 257B1140313700140314707Rat
1333057Or14c39bolfactory receptor family 14 subfamily C member 39B1140329678140330607Rat
1332591Or14e2-ps1olfactory receptor family 14 subfamily E member 2, pseudogene 11140358793140359187Rat
1333387Or14a257colfactory receptor family 14 subfamily A member 257C1140365515140366522Rat
1334239Or14a261-ps1olfactory receptor family 14 subfamily A member 261, pseudogene 11140385246140385832Rat
1333763Or14c39olfactory receptor family 14 subfamily C member 391140414652140415590Rat
70963Folh1folate hydrolase 11140428101140501563Rat
9349711LOC103691192twinkle protein, mitochondrial pseudogene1140480642140482788Rat
1626013Vom2r-ps66vomeronasal 2 receptor, pseudogene 661140519846140520742Rat
1598125Vom2r-ps67vomeronasal 2 receptor, pseudogene 671140594546140625318Rat
7544215Vmn2r116l-ps27vomeronasal 2, receptor 116 like, pseudogene 271140688438140712736Rat
41380632LOC120100443U2 spliceosomal RNA1140724802140724998Rat
2321947Brcc3-ps2BRCA1/BRCA2-containing complex, subunit 3, pseudogene 21140762660140885589Rat
6498800Rps4x-ps10ribosomal protein S4, X-linked, pseudogene 101140897229140897968Rat
620600Nox4NADPH oxidase 41140900886141078844Rat
1589755Tyrtyrosinase1141115036141210207Rat
41336186LOC120100222U7 small nuclear RNA1141120935141120995Rat
41118317LOC120100220U7 small nuclear RNA1141121136141121197Rat
2746Grm5glutamate metabotropic receptor 51141310069141884980Rat
7572872Sf3a1-ps1splicing factor 3A subunit 1, pseudogene 11141432976141436428Rat
7748684Eif5-ps5eukaryotic translation initiation factor 5, pseudogene 51141500532141507333Rat
7641285LOC102554680uncharacterized LOC1025546801142018187142025944Rat
2445Ctsccathepsin C1142028386142059841Rat
41001342LOC120100413small nucleolar RNA SNORA171142114137142114268Rat
628752Rab38RAB38, member RAS oncogene family1142182566142262923Rat
1598293Pgk1-ps7phosphoglycerate kinase 1, pseudogene 71142700683142701985Rat
2324099Rps19-ps10ribosomal protein S19, pseudogene 101142882999142883492Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
33870D1Mit172131126242834126243023Ratregion
36007D1Rat361361127453884127454022Ratregion
36023D1Rat381711131763437131763614Ratregion
37208D1Rat1992391134932150134932391Ratregion
37428D1Rat2002341125611501125611741Ratregion
37518D1Rat1342451133634986133635219Ratregion
35489D1Rat411461133480610133480759Ratregion
36862D1Rat421601133587283133587443Ratregion
37674D1Rat1791001125065093125065195Ratregion
37806D1Rat3522061138068269138068477Ratregion
37884D1Rat1842311131493780131494007Ratregion
37930D1Rat1832261129384185129384427Ratregion
37966D1Rat2091281134641522134641672Ratregion
36432D1Rat351651123479780123479925Ratregion
34777D1Rat371291127472095127472226Ratregion
35016D1Rat1061301137184788137184926Ratregion
35057D1Rat391351124668437124668572Ratregion
38120D1Rat1731561142635851142636017Ratregion
38296D1Rat1311761142990289142990467Ratregion
38332D1Rat1381971142830957142831158Ratregion
38336D1Rat3501711133786907133787062Ratregion
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38732D1Rat2302081133501235133501435Ratregion
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39364D1Rat1462491135527212135527524Ratregion
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2302911D1Hmgc133211141875982141876303Ratregion
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7206384fj64a08.x101135021627135022343Ratregion
7193112FURIN1261134354199134354764Ratregion
7206452Mesp111591133738513133739672Ratregion
5035761WI-186491301130960533130960663Ratregion
5035963PMC321432P12011133678763133678964Ratregion
5038878RH1273852001134219037134219237Ratregion
5036239D7Jpk31471133367773133367920Ratregion
5036358Idh22041134038739134038943Ratregion
5039020RH1274672021135122411135122613Ratregion
5035536Ntrk31041132383823132383927Ratregion
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5032543STS-L295562321127766718127766950Ratregion
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5030207BG3791731331137884263137884396Ratregion
502788321.MMHAP17FRG9.seq1011135253550135253651Ratregion
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5030511BE1069011711133993450133993621Ratregion
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5070303RH945891961134348147134348343Ratregion
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5061954BE1122751181135828718135828836Ratregion
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5066346PMC156147P37191134355760134356479Ratregion
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5088096Sh3d2c23341136255309136255643Ratregion
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5089723AU0493251751128045090128045265Ratregion
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5084550AI1782482091125771316125771525Ratregion
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5080716RH1417402151124010196124010411Ratregion
5088699AU0487242481132930298132930546Ratregion
5085435BM3910501821134064263134064451Ratregion
5085453BE1015441941134999032134999227Ratregion
5081454AI5566763411135270754135271095Ratregion
5085974AI0119282861134678462134678748Ratregion
5080828RH1418062121135559126135559338Ratregion
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5083409BF3910751541123943878123944032Ratregion
5086835Folh11201140434040140434160Ratregion
5081777BE1181681801129596771129596951Ratregion
5147888D1Hmgc142641140879679140879943Ratregion
5147890D1Hmgc152001142314155142314355Ratregion
5503750ST10BE4802811124270774124271055Ratregion
5504460PMC21264P11941133017291133017485Ratregion
5504624PMC316637P14661124013509124013975Ratregion
5506009UniSTS:49730314351133020167133021602Ratregion
5506608NR2F2_20748521124009003124009855Ratregion
5506981fd07g02.x114601131955043131956503Ratregion
5506985fd21c02.x101135022296135023250Ratregion
5499501stSG6024433811131560385131560766Ratregion
5499941UniSTS:2357031921135002122135002314Ratregion
5499645MARC_6238-6239:992007182:34721124344833124345305Ratregion
5500204Rhcg11401133539249133540389Ratregion
5500111UniSTS:2368131851129878297129878482Ratregion
5502184MARC_7859-7860:996688105:31951133383406133383993Ratregion
5505225Zfp5925341134982844134983378Ratregion
5501422Pcsk301134355488134356700Ratregion
5501458L3559312911133018218133019509Ratregion
5501626FURIN1571134357114134357271Ratregion
5501930MARC_17499-17500:1016469992:15901127242417127243007Ratregion
5502911Nr2f29131124009237124010150Ratregion
Position Markers

Flank 1: (D1Rat35)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21123,479,780 - 123,479,925 (+)MAPPER
Rnor_6.01130,917,121 - 130,917,265NCBI
Rnor_5.01131,958,920 - 131,959,064UniSTS
RGSC_v3.41124,748,920 - 124,749,065RGD
RGSC_v3.41124,748,921 - 124,749,065UniSTS
RGSC_v3.11124,827,264 - 124,827,408RGD
Celera1115,650,615 - 115,650,759UniSTS
RH 3.4 Map11454.0UniSTS
RH 3.4 Map11454.0RGD
SHRSP x BN Map159.42UniSTS
SHRSP x BN Map159.42RGD
Cytogenetic Map1 RGD
Flank 2: (D1Rat131)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21142,990,289 - 142,990,467 (+)MAPPER
Rnor_6.01152,870,926 - 152,871,103NCBI
Rnor_5.01159,182,062 - 159,182,239UniSTS
RGSC_v3.41145,648,742 - 145,648,920RGD
RGSC_v3.41145,648,743 - 145,648,920UniSTS
RGSC_v3.11145,727,149 - 145,727,326RGD
Celera1141,251,340 - 141,251,517UniSTS
RH 3.4 Map11116.0UniSTS
RH 3.4 Map11116.0RGD
RH 2.0 Map1728.9RGD
SHRSP x BN Map174.4799RGD
FHH x ACI Map167.73RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1358359Sradr1Stress Responsive Adrenal Weight QTL 14.74adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)130882023123479925Rat
70225Bp58Blood pressure QTL 583.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132356093162846471Rat
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132737458199368955Rat
2313402Anxrr24Anxiety related response QTL 24aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)148963584144267916Rat
1578654Bss10Bone structure and strength QTL 104femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)149393172159356837Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)149393289199050459Rat
2298545Neuinf8Neuroinflammation QTL 84.6nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)157336763151090257Rat
1582234Gluco18Glucose level QTL 183.40.0003blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)178479925123479925Rat
4889494Scort2Serum corticosterone level QTL 24.2blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)180592172125592172Rat
1578780Cm52Cardiac mass QTL 523.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)181591954219808434Rat
738022Anxrr13Anxiety related response QTL 134.60.00039locomotor behavior trait (VT:0001392)number of 20 x 20 cm floor squares crossed into, out of or within a discrete space in an experimental apparatus (CMO:0001514)183547917128547917Rat
724529Cm16Cardiac mass QTL 162.7heart mass (VT:0007028)calculated heart weight (CMO:0000073)187580395150700247Rat
724521Uae1Urinary albumin excretion QTL 13.80.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)190508614173018436Rat
1358902Bw47Body weight QTL 471.67body mass (VT:0001259)body weight (CMO:0000012)190508614180359386Rat
1302788Scl19Serum cholesterol QTL 194.60.001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)190532338123479925Rat
1300153Bp171Blood pressure QTL 1713.37arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)190664883143200202Rat
2293142Bp314Blood pressure QTL 314arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)192184926137184926Rat
724567Tcas6Tongue tumor susceptibility QTL 66.85tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)192948896144267916Rat
1331793Bp200Blood pressure QTL 2003.71601arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)194494440172949803Rat
1331751Bp199Blood pressure QTL 1993.60022arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)194494440181830018Rat
1331749Hrtrt11Heart rate QTL 112.973heart pumping trait (VT:2000009)heart rate (CMO:0000002)194494440198211706Rat
70209Niddm23Non-insulin dependent diabetes mellitus QTL 232.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)194494440198324465Rat
731168Bp154Blood pressure QTL 1543.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)194642644214537671Rat
61346Rf2Renal disease susceptibility QTL 23.7urine protein amount (VT:0005160)urine protein level (CMO:0000591)199267916144267916Rat
61399Tcat1Tongue tumor resistance QTL 13.3tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 5 mm (CMO:0001879)199267916144267916Rat
8655649Arrd1Age-related retinal degeneration QTL 14.89retinal layer morphology trait (VT:0003727)percentage of study population developing retinopathy during a period of time (CMO:0002453)1100357752183970443Rat
2317833Alcrsp19Alcohol response QTL 1912.40.001response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1100979852145979852Rat
1641897Alcrsp1Alcohol response QTL 1response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)1100979852145979852Rat
2303591Gluco41Glucose level QTL 412blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1102168504147168504Rat
61370Mcs3Mammary carcinoma susceptibility QTL 32.15mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)1102268556147268556Rat
1354623Rf46Renal function QTL 463.8blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)1102813953151162766Rat
1354591Cm36Cardiac mass QTL 364.1heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1102813953201278233Rat
1354615Cm32Cardiac mass QTL 325.2heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)1102813953201278233Rat
1354606Bp246Blood pressure QTL 2463.6arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)1102813953218753816Rat
9590300Scort16Serum corticosterone level QTL 164.390.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)1103111621148111621Rat
8694370Bw154Body weight QTL 1548.910.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)1103111621148111621Rat
631496Bp97Blood pressure QTL 973.08arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1106047847151047847Rat
1300158Bp173Blood pressure QTL 1733.48arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)1115540693185145286Rat
7794788Mcs32Mammary carcinoma susceptibility QTL 322.61mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)1115540693238914717Rat
631199Cm23Cardiac mass QTL 234.60.0004heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)1115585465172949803Rat
7421630Bp362Blood pressure QTL 3620.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1118608292241799120Rat
2313060Bss71Bone structure and strength QTL 712.60.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)1118944747163944747Rat
631205Bp196Blood pressure QTL 19640.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1118944897199050459Rat
1598850Bp297Blood pressure QTL 2972.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1121006655166006655Rat
1598866Bp287Blood pressure QTL 2875.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1121006655166006655Rat
61442Strs1Sensitivity to stroke QTL 17.4cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)1121767634166767634Rat
2293140Bp313Blood pressure QTL 313arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1121833674166833674Rat
2325726Eae30Experimental allergic encephalomyelitis QTL 30nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)1123053310128593844Rat
631544Bp84Blood pressure QTL 845.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1123350408181759564Rat
1358189Cstrr1Cold stress response QTL 10.0001catecholamine amount (VT:0010543)urine norepinephrine level (CMO:0001629)1123350408182418476Rat
1641895Bp298Blood pressure QTL 298arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1123350408182418476Rat
1578770Stresp23Stress response QTL 23kidney sympathetic nerve activity (VT:0004050)stimulated renal sympathetic nerve activity to basal renal sympathetic nerve activity ratio (CMO:0001786)1123350408182418476Rat
631549Bp89Blood pressure QTL 895.7arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1123350581201284552Rat
631570Bp94Blood pressure QTL 940.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1123479780142990467Rat
634348Bp138Blood pressure QTL 138arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1125611501168883176Rat
9685799Bp375Blood pressure QTL 375arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1125611501170611501Rat
631654Bp107Blood pressure QTL 107arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1125611501170611501Rat
9685802Bp376Blood pressure QTL 376arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1126540680171540680Rat
738006Anxrr14Anxiety related response QTL 1440.00035locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1130636910175636910Rat
738028Anxrr12Anxiety related response QTL 124.90.00001locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1130636910175636910Rat
631202Gluco13Glucose level QTL 130.0001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1131763437159756369Rat
6893347Bw98Body weight QTL 980.20.53body mass (VT:0001259)body weight (CMO:0000012)1133680936178680936Rat
6893361Bw104Body weight QTL 1040.590.27body mass (VT:0001259)body weight (CMO:0000012)1133680936178680936Rat
1558645Bw55Body weight QTL 553.20.004body mass (VT:0001259)body weight (CMO:0000012)1133680936178680936Rat
631206Niddm40Non-insulin dependent diabetes mellitus QTL 40blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1136745990163747690Rat
71118Thym1Thymus enlargement QTL 110.170.001thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)1136829932181829932Rat
724550Thym3Thymus enlargement QTL 37.820.001thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)1136829932181829932Rat
631519Pia11Pristane induced arthritis QTL 115.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1136830018181830018Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Bp94

RGD Curation Notes
Note Type Note Reference
qtl_cross_type backcross  
qtl_disease overlaps with QTL for disease phenotypes of renal failure, stroke, ventricular mass, and salt susceptibility defined in other rat strains 68885
qtl_gene overlaps with genes Str1, Rf-2 and Lvm-2 68885
qtl_general also corresponded approximately with a blood pressure QTL described on human chr 15 68885