Scl8 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Scl8 (Serum cholesterol level QTL8) Rattus norvegicus

Symbol: Scl8
Name: Serum cholesterol level QTL8
RGD ID: 631514
Trait: blood cholesterol amount   (VT:0000180)    
Measurement Type: serum total cholesterol level   (CMO:0000363)    
LOD Score: 4.4
P Value: Not Available
Variance: Not Available
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.02231,621,666 - 266,435,125RGD_MAPPER_PIPELINERnor6.0
Rnor_5.02250,313,889 - 285,068,071RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.42224,795,742 - 258,207,540RGDRGSC3.4
RGSC_v3.12224,810,349 - 258,222,147RGD
Cross Type: Not Available
Strains Crossed: BC/CpbU LEW/OlaHsd 

Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Measurement Method

Vertebrate Trait

Rat Strain
BC/CpbU  (IEA)
LEW/OlaHsd  (IEA)


References - curated
# Reference Title Reference Citation
1. Quantitative trait loci influencing blood and liver cholesterol concentration in rats. Bonne AC, etal., Arterioscler Thromb Vasc Biol 2002 Dec 1;22(12):2072-9.


Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
Position Markers

Peak: (D2Rat69)
Rat AssemblyChrPosition (strand)Source
Rnor_6.02254,121,593 - 254,121,739NCBI
Rnor_5.02272,813,816 - 272,813,962UniSTS
RGSC_v3.42247,295,669 - 247,295,816RGD
RGSC_v3.42247,295,670 - 247,295,816UniSTS
RGSC_v3.12247,310,276 - 247,310,423RGD
Celera2229,879,373 - 229,879,519UniSTS
RH 2.0 Map21076.7RGD
SHRSP x BN Map2106.7499RGD
Cytogenetic Map2q45UniSTS

Additional Information

RGD Curation Notes
Note Type Note Reference