Panci1 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Panci1 (Pancreas inflammation QTL 1) Rattus norvegicus

Symbol: Panci1
Name: Pancreas inflammation QTL 1
RGD ID: 631201
Previously known as: Pancreatitis and diabetes mellitus in WBN/Kob; Pdwk1; Pi1
Trait: pancreas integrity trait   (VT:0010560)    
Measurement Type: percentage of study population displaying chronic pancreatitis at a point in time   (CMO:0001214)    
LOD Score: 0.0
P Value: 0.001
Variance: 12.0
Inheritance Type: additive
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.27116,677,189 - 127,103,496RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.07126,463,827 - 137,325,116RGD_MAPPER_PIPELINERnor6.0
Rnor_5.07126,177,060 - 136,963,167RGDRnor5.0
RGSC_v3.47123,574,930 - 134,614,033RGDRGSC3.4
RGSC_v3.17123,608,910 - 134,690,471RGD
Cross Type: intercross
Strains Crossed: BN/CrlCrlj WBN/KobSlc 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
pancreatitis  (IDA)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
BN/CrlCrlj  (IEA)
WBN/KobSlc  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Quantitative trait locus analysis for chronic pancreatitis and diabetes mellitus in the WBN/Kob rat. Tsuji A, etal., Genomics 2001 Jun 15;74(3):365-9.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
61826Chkbcholine kinase beta7120500960120504359Rat
69264Shank3SH3 and multiple ankyrin repeat domains 37120568707120630796Rat
70975Mapk12mitogen-activated protein kinase 127120206005120216711Rat
3369Pparaperoxisome proliferator activated receptor alpha7116832405116900878Rat
621300Cntn1contactin 17123263146123560896Rat
621814Slc2a13solute carrier family 2 member 137122399329122726605Rat
69244Abcd2ATP binding cassette subfamily D member 27122263034122311642Rat
620462Pim3Pim-3 proto-oncogene, serine/threonine kinase7119953377119956587Rat
620999Nell2neural EGFL like 27126343089126662694Rat
2397Cpt1bcarnitine palmitoyltransferase 1B7120491354120500833Rat
1304826Alg12ALG12, alpha-1,6-mannosyltransferase7119895112119909488Rat
708500Alg10ALG10, alpha-1,2-glucosyltransferase7121335042121340308Rat
735191Panx2pannexin 27120139259120153056Rat
62041Syt10synaptotagmin 107120863014120920730Rat
2024Acracrosin7120636581120644474Rat
1304735Mov10l1Mov10 like RISC complex RNA helicase 17120070171120135406Rat
628739Mioxmyo-inositol oxygenase7120405031120407529Rat
1305126Kif21akinesin family member 21A7122062523122179051Rat
735090Prickle1prickle planar cell polarity protein 17124639142124735027Rat
1306041Ttc38tetratricopeptide repeat domain 387116925273116948616Rat
1306749Rabl2RAB, member of RAS oncogene family like 27120652175120660906Rat
1305019Cerkceramide kinase7117225855117269436Rat
1306274Lmf2lipase maturation factor 27120418343120422825Rat
1306207Pphln1periphilin 17124538594124629985Rat
1308860Pdzrn4PDZ domain containing RING finger 47123816961123965491Rat
1305756Tympthymidine phosphorylase7120438768120444088Rat
1307725Adamts20ADAM metallopeptidase with thrombospondin type 1 motif, 207125396227125528020Rat
1310614Creld2cysteine-rich with EGF-like domains 27119909626119916556Rat
1306462Ttll8tubulin tyrosine ligase like 87120000638120046556Rat
1306587Pkdrejpolycystin family receptor for egg jelly7116909094116915468Rat
1306588Tbc1d22aTBC1 domain family, member 22a7117292481117577468Rat
1307743Tubgcp6tubulin, gamma complex associated protein 67120177686120198986Rat
1304765Ano6anoctamin 67126933629127113589Rat
1305874Hdac10histone deacetylase 107120199126120205850Rat
1306001Cdpf1cysteine rich, DPF motif domain containing 17116896672116905542Rat
1304692Pus7lpseudouridine synthase 7 like7125659507125706582Rat
1302971Adm2adrenomedullin 27120393219120394965Rat
1311872Twf1twinfilin actin-binding protein 17125715938125727834Rat
1309727Mapk8ip2mitogen-activated protein kinase 8 interacting protein 27120526732120536982Rat
1310875TrabdTraB domain containing7120155042120166015Rat
1311441Wnt7bWnt family member 7B7116634817116679089Rat
1309851Zcrb1zinc finger CCHC-type and RNA binding motif containing 17124525227124538564Rat
1308012Dennd6bDENN domain containing 6B7120261679120273667Rat
1305495Plxnb2plexin B27120232276120258385Rat
1308552Mlc1modulator of VRAC current 17120046705120067049Rat
1309983Gramd4GRAM domain containing 47117150398117224056Rat
1305303Irak4interleukin-1 receptor-associated kinase 47125682502125708294Rat
1307090Sbf1SET binding factor 17120358338120385022Rat
1309340Mapk11mitogen-activated protein kinase 117120218471120225488Rat
1305949Zbed4zinc finger, BED-type containing 47119846374119883495Rat
1307939Cpne8copine 87121615293121789507Rat
1310381Arsaarylsulfatase A7120542788120547577Rat
1562115Tafa5TAFA chemokine like family member 57118613731118835016Rat
1562257Klhdc7bkelch domain containing 7B7120452081120456094Rat
1565937Ncaph2non-SMC condensin II complex, subunit H27120422926120439942Rat
1562562Tmem117transmembrane protein 1177125757591126219692Rat
1311229TrmutRNA mitochondrial 2-thiouridylase7116969750116987704Rat
1563990Ppp6r2protein phosphatase 6, regulatory subunit 27120285378120356995Rat
1563164Gtse1G-2 and S-phase expressed 17116949997116966826Rat
1561168Lrrk2leucine-rich repeat kinase 27122826712122987711Rat
1563062Gxylt1glucoside xylosyltransferase 17124400896124434682Rat
1560617RGD1560617hypothetical gene supported by NM_053561; AF0625947118084674118085850Rat
1302995Smgcsubmandibular gland protein C7123017896123048211Rat
1359605Dbx2developing brain homeobox 27126772389126802625Rat
1560078Celsr1cadherin, EGF LAG seven-pass G-type receptor 17116987616117125035Rat
1311907Selenooselenoprotein O7120167913120178806Rat
1311855Brd1bromodomain containing 17119774187119822031Rat
1564322Odf3bouter dense fiber of sperm tails 3B7120444232120447383Rat
1584027C7h12orf40similar to human chromosome 12 open reading frame 407122318495122386002Rat
1582851Yaf2YY1 associated factor 27124444152124499688Rat
1586367Syce3synaptonemal complex central element protein 37120456800120482882Rat
1586372Rpl18-ps11ribosomal protein L18, pseudogene 117125693060125693754Rat
1593154Aph1a-ps1aph-1 homolog A, gamma secretase subunit, pseudogene 17122043197122044039Rat
1590886Pkm-ps8pyruvate kinase M1/2, pseudogene 87121933227121935893Rat
1598341Zdhhc25zinc finger, DHHC-type containing 257119692679119693911Rat
1596079Ndufb4-ps1NADH:ubiquinone oxidoreductase subunit B4, pseudogene 17125743209125743656Rat
1594484St13-ps5ST13, Hsp70 interacting protein, pseudogene 57124222341124223485Rat
1594485Ptbp1-ps5polypyrimidine tract binding protein 1, pseudogene 57121962085121964251Rat
1588759Hmgb1-ps3high mobility group box 1, pseudogene 37122951911122953119Rat
1624205Muc19mucin 19, oligomeric7123017896123139053Rat
2322820Rpl9-ps2ribosomal protein L9, pseudogene 27120705785120711194Rat
2323271Ndufs2-ps2NADH:ubiquinone oxidoreductase core subunit S2, pseudogene 27123162940123173832Rat
2325399Mirlet7c2microRNA let-7c-27116803771116803865Rat
2325607Mirlet7bmicroRNA let-7b7116804186116804270Rat
2325613Mir349microRNA 3497120243311120243407Rat
6490492Rap1b-ps4RAP1B, member of RAS oncogene family, pseudogene 47122994814122995428Rat
6493127LOC100911384uncharacterized LOC1009113847124836005124846872Rat
7501918LOC102546882uncharacterized LOC1025468827119550685119554468Rat
7529302LOC102547254uncharacterized LOC1025472547119834687119843366Rat
7508602LOC102552792uncharacterized LOC1025527927124366597124389659Rat
7651247LOC102554082uncharacterized LOC1025540827116698159116711879Rat
7623138LOC102546578uncharacterized LOC1025465787126074819126078227Rat
7556599LOC102549998uncharacterized LOC1025499987120394951120407665Rat
7544728LOC102552608uncharacterized LOC1025526087124139949124180762Rat
7600390LOC102553542uncharacterized LOC1025535427124987988125015033Rat
7567694LOC102549176uncharacterized LOC1025491767120256819120267136Rat
7714119LOC102547300uncharacterized LOC1025473007126970355126976957Rat
9232311LOC103692964uncharacterized LOC1036929647124838107124846839Rat
9337028LOC103692959uncharacterized LOC1036929597124058766124082256Rat
11466928LOC108351625uncharacterized LOC1083516257117791277117801505Rat
11452704LOC108351532uncharacterized LOC1083515327124548027124571262Rat
11372989LOC10835158540S ribosomal protein S19 pseudogene7121950954121955846Rat
11460636LOC10835156260S ribosomal protein L30 pseudogene7124468445124498589Rat
11406344LOC108351535uncharacterized LOC1083515357125345203125353428Rat
11406985LOC108351584uncharacterized LOC1083515847117291870117292481Rat
11415142LOC108351530uncharacterized LOC1083515307123039901123110869Rat
11416329LOC108351529uncharacterized LOC1083515297122745859122826500Rat
11417555LOC108351527uncharacterized LOC1083515277120634981120638123Rat
11426535LOC108351525uncharacterized LOC1083515257119760553119767979Rat
11407928Septin7-ps3septin 7, pseudogene 37120660773120689710Rat
11477881LOC108351538uncharacterized LOC1083515387125637491125657721Rat
11481295LOC108351526uncharacterized LOC1083515267120221658120224686Rat
11498066LOC108351522uncharacterized LOC1083515227118435651118453710Rat
11483961LOC108351528uncharacterized LOC1083515287122235139122241547Rat
11486329LOC108351533uncharacterized LOC1083515337124914411124925552Rat
11490457LOC108351537uncharacterized LOC1083515377125646585125666997Rat
41321956LOC120093705uncharacterized LOC1200937057116682789116691369Rat
41086182LOC120094050U6 spliceosomal RNA7120409735120409841Rat
41203087LOC120093713uncharacterized LOC1200937137125025292125034559Rat
41322371LOC120093930U7 small nuclear RNA7122910569122910631Rat
41323095LOC120093825uncharacterized LOC1200938257119979639119981431Rat
41355695LOC120093979small nucleolar RNA SNORA177125810986125811117Rat
41114013LOC120093885basic proline-rich protein-like7119514130119548919Rat
41207755LOC120093893uncharacterized LOC1200938937118061949118069267Rat
41326720LOC120093912U6 spliceosomal RNA7123911328123911427Rat
41121851LOC120093824uncharacterized LOC1200938247120142662120148440Rat
41122941LOC120093709uncharacterized LOC1200937097121197798121214827Rat
41102183LOC120093714uncharacterized LOC1200937147125116671125126413Rat
41182499LOC120093712uncharacterized LOC1200937127124190350124207136Rat
41293034LOC120093706uncharacterized LOC1200937067116778534116781215Rat
41294367LOC120093707uncharacterized LOC1200937077119674813119692680Rat
40998216Trnal-aag11transfer RNA leucine (anticodon AAG) 117119940210119940282Rat
40948348LOC120093716uncharacterized LOC1200937167126531444126535293Rat
41340613LOC120093711uncharacterized LOC1200937117123214161123227439Rat
40954500LOC120093936U7 small nuclear RNA7117544630117544692Rat
40982778LOC120093710uncharacterized LOC1200937107122285710122298329Rat
40933796LOC120093922U6 spliceosomal RNA7126753845126753948Rat
41008048LOC120094043U4 spliceosomal RNA7126638318126638409Rat
40940249LOC120093708uncharacterized LOC1200937087119663863119681600Rat
41311727LOC120093826uncharacterized LOC1200938267120547891120562900Rat
41075965LOC120093941U7 small nuclear RNA7123165869123165933Rat
41050109LOC120093827uncharacterized LOC1200938277120590368120594268Rat
41306769LOC120093828uncharacterized LOC1200938287120771619120828560Rat
41021584LOC120093715uncharacterized LOC1200937157125921873125926252Rat
41073389Snora3l1small nucleolar RNA, H/ACA box 3 like 17123941058123941188Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
33798D7Mit242437121668493121668746Ratregion
33816D7Mit11927116738749116738842Ratregion
33838D3Mit181887116932605116932728Ratregion
33784D7Mit81967125357119125357308Ratregion
35304D7Rat41187127103496127103614Ratregion
37750D7Rat521537119919365119919516Ratregion
37866D7Rat812417122220558122220831Ratregion
36420D7Rat62427122935432122935679Ratregion
35118D7Rat71567119170078119170250Ratregion
35122D7Rat92467118198041118198277Ratregion
35681D7Rat51587124049796124049952Ratregion
35773D7Rat81267119513385119513506Ratregion
39910D7Rat1192267125233504125233722Ratregion
38076D7Rat851277120169095120169231Ratregion
38136D7Rat622407123771817123772045Ratregion
38306D7Rat971857116677010116677189Ratregion
40378D7Rat1231577118055438118055605Ratregion
38474D7Rat1111237120228788120228901Ratregion
40148D7Rat1241447119736284119736426Ratregion
39422D7Rat1211497118845592118845747Ratregion
39552D7Rat1182087125582248125582454Ratregion
42840D7Rat1972387120240322120240550Ratregion
42841D7Rat1961497123929322123929461Ratregion
41430D7Rat1251567119940457119940607Ratregion
42346D7Rat2331557116854121116854276Ratregion
41828D7Rat1992437117662740117662979Ratregion
41886D7Rat1982297117580923117581137Ratregion
44318D7Got1281267119723144119723266Ratregion
44320D7Got1272917120589606120589895Ratregion
44321D7Got1162617118446270118446531Ratregion
44322D7Got1211517119390670119390821Ratregion
44323D7Got1302147121665245121665459Ratregion
44324D7Got1291847121135438121135622Ratregion
44325D7Got1222527118203526118203778Ratregion
44326D7Got1172087117964548117964755Ratregion
44327D7Got1192707118089985118090255Ratregion
44329D7Got1312907123177720123178009Ratregion
44331D7Got1251957124429308124429503Ratregion
44332D7Got1242487125047895125048143Ratregion
44333D7Got1182777123408244123408521Ratregion
44335D7Got1262547125233422125233709Ratregion
44336D7Got1122167126483674126483890Ratregion
44337D7Got1151497124453039124453182Ratregion
44338D7Got1141997126097126126097325Ratregion
60558D7Got1062397116852655116852895Ratregion
60046D13Got471307117021397117021431Ratregion
62496D7Uia21907121973392121973582Ratregion
66603D7Mco63427125806461125806799Ratregion
66603D7Mco63427125806461125806889Ratregion
67284D7Arb91417120525661120525802Ratregion
67755D7Uwm221487116836447116836583Ratregion
1630649D7Wox441757120495002120495177Ratregion
1632006D7Wox531997120630286120630485Ratregion
1628868D7Got2401277126774776126774903Ratregion
1640998D7Got2621107124079093124079203Ratregion
1633865D7Wox487122265140122265344Ratregion
5038710BB1957881387120259549120259687Ratregion
5038712AW1085361167120406767120406979Ratregion
5036119Cntn11577123558833123558990Ratregion
5035600D14S10643137118151756118152069Ratregion
5035693D20S83807119065502119066478Ratregion
5031248PMC113093P13197116894866116895185Ratregion
5026024RH1306171987117225909117226107Ratregion
5028899RH1427471007125659725125659825Ratregion
5031554AU0479451447119752754119752898Ratregion
5034406BF4204381077126464799126464906Ratregion
5034408BF4205191277124836082124836209Ratregion
5029093RH1434961467120600500120600646Ratregion
5034680BI2757851647117577149117577309Ratregion
5032311AI8476941277120534611120534738Ratregion
5032325Ppara5347116895160116895694Ratregion
5035096SGC302611387120356123120356261Ratregion
5032423AW2157931287124639256124639384Ratregion
5035448BE1149741737124696400124696573Ratregion
5027495AW5488911277120199630120199757Ratregion
5030147BF3890681537124402248124402401Ratregion
5025134AW7427852387116900549116900787Ratregion
5030663BF3987231937121334503121334696Ratregion
5030675BE1075821687122074905122075073Ratregion
5033497RH1390471877116899824116900011Ratregion
5028115mHAa28a6.seq1877119135206119135393Ratregion
5030951BE1084881527126993358126993510Ratregion
5033733RH1399172117120200013120200224Ratregion
5031071BE1157511677118132858118133025Ratregion
5031111BF4063652227120310875120311097Ratregion
5031117BE1098781887122264137122264325Ratregion
5031179BF4136592067121790292121790498Ratregion
5053701RH1428011037125725733125725836Ratregion
5055983RH1441151217122310975122311096Ratregion
5056479RH1444022817116711514116711795Ratregion
5052059RH948161647116895167116895331Ratregion
5054567RH1432981087124639200124639308Ratregion
5058716BE1023641967120003081120003277Ratregion
5056711RH1445362447124441492124441736Ratregion
5058154BI2776741507126559900126560050Ratregion
5056825RH1446021527120558731120558883Ratregion
5059014BF3873591527125925594125925746Ratregion
5058210BI2777831877120543372120543559Ratregion
5058240BF3868901507116778302116778452Ratregion
7191231DLAT2027120545879120546081Ratregion
5057598BE1010841747121479718121479892Ratregion
5050652RH1341801837120149494120149677Ratregion
5050040RH1338281887117227470117227658Ratregion
5054669RH1433571077124445802124446524Ratregion
5041812RH12907307120439749120439903Ratregion
5041076RH1286491947117292081117292275Ratregion
5041204RH1287222027120438507120438709Ratregion
5043754RH1302082207126343118126343338Ratregion
5045824RH1314002067124629718124629924Ratregion
5048738RH1330771997120418599120418798Ratregion
5045806RH1313891877124762205124762392Ratregion
5046234RH1316352127124400952124401164Ratregion
5046730RH1319211817116987647116987828Ratregion
5047044RH1321021927116987483116987675Ratregion
5042372RH1293961827116901115116901297Ratregion
5042612RH12953907120165276120165993Ratregion
5042450RH1294412037121615345121615548Ratregion
5042488RH1294641837120165568120165751Ratregion
5043756RH1302091527126343192126343344Ratregion
5040544RH1283441877125716164125716351Ratregion
5041416RH1288441857120206034120206219Ratregion
5075068RH1383801377125396282125396419Ratregion
5075526RH1386441267122853337122853463Ratregion
5075898RH1388601457120259619120259764Ratregion
5077550RH1398201817125397838125398019Ratregion
5077658RH1398831897120438861120439050Ratregion
5079468RH1410151857120177641120177826Ratregion
5077646RH1398761977118834622118834818Ratregion
5078174RH1401861907120386013120386203Ratregion
5078308RH1402662007116893729116893929Ratregion
5073146RH1372651847121345127121345311Ratregion
5080348RH1415272107120165335120165545Ratregion
5073228RH1373141507120652226120652376Ratregion
5078736RH140522987118179887118179985Ratregion
5071662RH1352122017120536731120536932Ratregion
5074004RH1377641877120218528120218715Ratregion
5070950RH1348001807120275687120275867Ratregion
5074744RH1381931267124410980124411106Ratregion
5071738RH1352561807116899823116900003Ratregion
5061770AW5333051527116917646116917798Ratregion
5067368AU0477971017117170753117170854Ratregion
5068282AU0472402767119232505119232783Ratregion
5068334AU0472092297123063478123063702Ratregion
5068354AU0471972197117916503117916717Ratregion
5070139RH944951627116895165116895327Ratregion
5069854AU0468623387120505069120505409Ratregion
5062220BE1063612037116778940116779143Ratregion
5063852BE1200601757122103887122104062Ratregion
5064010BE1204271467117223665117223811Ratregion
5064272BE1209561677117289031117289198Ratregion
5060680BE1108331877119782170119782357Ratregion
5065938BE1162181897122266067122266256Ratregion
5066022BE1165621287125659723125659851Ratregion
5061048BF401761937120535557120535650Ratregion
5061248BE0994141997124701708124701907Ratregion
5061418BF3963771787124581871124582049Ratregion
5063222BE1139211797121445354121445533Ratregion
5064850BE1086301527120590475120590627Ratregion
5064944BF4053131847120590605120590788Ratregion
5066552AU0482892157121214699121214914Ratregion
5066552AU0482892157121214699121214984Ratregion
5082073BF4159151377123498537123498674Ratregion
5087136AA8937471197119883109119883228Ratregion
5087358Chetk1767120501074120501250Ratregion
5089113AU0489611797123631466123631645Ratregion
5088267AU0484662727123408225123408497Ratregion
5083579BI2828681547116895168116895322Ratregion
5089477AU0491792617123631493123631753Ratregion
5089705AU0493141387125604147125604285Ratregion
5090821AU0499832497118579934118580177Ratregion
5085431BE0968361527126772448126772600Ratregion
5085748AI2316221507124403024124403174Ratregion
5089007AU0488991897117486066117486255Ratregion
5089165AU0489942897123181620123181909Ratregion
5086648AA8932412267119895225119895451Ratregion
5086663BE1152411727122108333122108505Ratregion
5085133BQ1955941527123050902123051054Ratregion
5086760AI4126382027124436930124437132Ratregion
5086797BM3874811567126970408126970564Ratregion
5086817BE1073721897120286837120287026Ratregion
5083927AA9431371237125920451125920574Ratregion
5503115D15Roc102407123841890123842130Ratregion
5503232UniSTS:2373782717120653572120653843Ratregion
5503714SBF1_86114307120358338120358768Ratregion
5504914Mapk1110587120218618120219676Ratregion
5505552D4S298315407120527519120529059Ratregion
5499673MARC_7139-7140:992008251:107122043372122043594Ratregion
5500567RH1360251867120439191120439377Ratregion
5501812MARC_13855-13856:1032800061:34097124640929124641338Ratregion
5501876MARC_16689-16690:1017862088:11277120496188120496842Ratregion
Position Markers

Flank 1: (D7Rat4)
Rat AssemblyChrPosition (strand)Source
mRatBN7.27127,103,496 - 127,103,614 (+)MAPPER
Rnor_6.07137,325,116 - 137,325,233NCBI
Rnor_5.07136,963,167 - 136,963,284UniSTS
RGSC_v3.47134,614,034 - 134,614,151UniSTS
RGSC_v3.47134,614,033 - 134,614,151RGD
RGSC_v3.17134,690,471 - 134,690,588RGD
Celera7123,609,897 - 123,610,014UniSTS
RH 3.4 Map71092.0RGD
RH 3.4 Map71092.0UniSTS
RH 2.0 Map7773.9RGD
SHRSP x BN Map780.4799RGD
FHH x ACI Map766.88RGD
Cytogenetic Map7q35UniSTS
Flank 2: (D7Rat97)
Rat AssemblyChrPosition (strand)Source
mRatBN7.27116,677,010 - 116,677,189 (+)MAPPER
Rnor_6.07126,463,649 - 126,463,827NCBI
Rnor_5.07126,176,882 - 126,177,060UniSTS
RGSC_v3.47123,574,502 - 123,574,680UniSTS
RGSC_v3.47123,574,473 - 123,574,930RGD
RGSC_v3.17123,608,732 - 123,608,910RGD
Celera7112,972,542 - 112,972,733UniSTS
RH 3.4 Map7908.3RGD
RH 3.4 Map7908.3UniSTS
RH 2.0 Map7688.9RGD
SHRSP x BN Map770.2799RGD
FHH x ACI Map754.48RGD
Cytogenetic Map7q34UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61357Bp38Blood pressure QTL 381.60.052arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)741333674119109060Rat
1300179Kidm5Kidney mass QTL 53.51kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)743747012135012528Rat
631504Cm27Cardiac mass QTL 273.45heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)744421311118198041Rat
70173Niddm19Non-insulin dependent diabetes mellitus QTL 194.330.00005blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)764002457135012528Rat
631540Bw9Body weight QTL 94.5body mass (VT:0001259)body weight (CMO:0000012)769736226117455174Rat
634331Pia17Pristane induced arthritis QTL 174.7joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)773829340130221005Rat
7411654Foco25Food consumption QTL 259.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)775918751120918751Rat
7411607Foco15Food consumption QTL 150.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)775918751120918751Rat
1331728Bp214Blood pressure QTL 2142.825arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)780221299124373579Rat
1331768Kidm10Kidney mass QTL 104.62096kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)780221299125221299Rat
2317052Aia17Adjuvant induced arthritis QTL 172.13joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)781737938126737938Rat
634322Bw12Body weight QTL 120body mass (VT:0001259)body weight (CMO:0000012)783153392128153392Rat
1358891Bp265Blood pressure QTL 2652.21arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)783591953134666232Rat
1358914Bp266Blood pressure QTL 266arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)783591953134666232Rat
71114Niddm14Non-insulin dependent diabetes mellitus QTL 144.5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)784257275129257275Rat
2298475Eau6Experimental allergic uveoretinitis QTL 60.0029uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)784257275129257275Rat
1558655Swd4Spike wave discharge measurement QTL 43.680.0002brain electrophysiology trait (VT:0010557)brain spike-and-wave discharge severity grade (CMO:0001988)786983365131983365Rat
1549899Stresp8Stress response QTL 84.370.0008stress-related behavior trait (VT:0010451)defensive burying duration (CMO:0001961)790482196135012528Rat
2299163Iddm34Insulin dependent diabetes mellitus QTL 342.71blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)791281130135012528Rat
631687Hcas1Hepatocarcinoma susceptibility QTL 13.90.001liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)791412594129807172Rat
2313102Bmd79Bone mineral density QTL 792.30.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)794811085116738842Rat
731176Glom5Glomerulus QTL 52.50.0035kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)796670164135012528Rat
1331731Bp216Blood pressure QTL 2162.851arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7102297359133492884Rat
70159Bp61Blood pressure QTL 610.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7103146217116738842Rat
731174Uae23Urinary albumin excretion QTL 232.40.0042urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)7104603555135012528Rat
2306821Bp335Blood pressure QTL 3350.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7106571501135012528Rat
631663Bw6Body weight QTL 63.4body mass (VT:0001259)body weight (CMO:0000012)7111075573134976056Rat
1300112Bp183Blood pressure QTL 1833.51arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)7111182207135012528Rat
1331748Bp215Blood pressure QTL 2154.043arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7112308254133492884Rat
1357339Stl14Serum triglyceride level QTL 143.450.0001blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)7112729683133492707Rat
1582240Sffal1Serum free fatty acids level QTL 13.40.0021blood free fatty acid amount (VT:0001553)serum free fatty acids level (CMO:0000547)7116677010124049952Rat
631201Panci1Pancreas inflammation QTL 100.001pancreas integrity trait (VT:0010560)percentage of study population displaying chronic pancreatitis at a point in time (CMO:0001214)7116677189127103496Rat
1354582Stl11Serum triglyceride level QTL 113.42blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)7119513385135012528Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Panci1


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-04-14 Panci1  Pancreas inflammation QTL 1  Pi1    Symbol updated 1299863 APPROVED

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general associates with the increased incidences of chronic pancreatitis 619682
qtl_general homologous to human chromosomes 22q12 q13.33 and 12q12q13.2 619682
qtl_statistics Likelihood Ratio Statistic: 17.1 619682
qtl_statistics_details also significant for body weight (lod=8) 619682