Rf4 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Rf4 (Renal disease susceptibility QTL 4) Rattus norvegicus

Symbol: Rf4
Name: Renal disease susceptibility QTL 4
RGD ID: 619619
Trait: urine total protein amount   (VT:0000032)    
Measurement Type: urine protein excretion rate to body weight ratio   (CMO:0001099)    
LOD Score: 4.1
P Value: 0.002
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2141 - 32,754,612RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0141 - 34,403,399RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0141 - 34,346,301RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4141 - 34,067,237RGD_MAPPER_PIPELINERGSC3.4
RGSC_v3.1140 - 34,067,237RGD
Cross Type: F2
Strains Crossed: ACI/N FHH/Eur 



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Vertebrate Trait

Rat Strain
ACI/N  (IEA)
FHH/Eur  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Evidence of gene-gene interactions in the genetic susceptibility to renal impairment after unilateral nephrectomy. Shiozawa M, etal., J Am Soc Nephrol 2000 Nov;11(11):2068-78.
2. Absence of an interaction between the Rf-1 and Rf-5 QTLs influencing susceptibility to renal damage in rats. van Dijk SJ, etal., Nephron Exp Nephrol. 2006;104(3):e96-e102. Epub 2006 Jul 12.

Region

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
Position Markers

Peak: (D14Mgh7)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21410,254,556 - 10,254,668 (+)MAPPER
Rnor_6.01411,903,344 - 11,903,455NCBI
Rnor_5.01411,846,246 - 11,846,357UniSTS
RGSC_v3.41411,567,182 - 11,567,293UniSTS
RGSC_v3.41411,567,181 - 11,567,293RGD
Celera1410,355,168 - 10,355,279UniSTS
RGSC_v3.11411,567,181 - 11,567,293RGD
RH 2.0 Map14177.6RGD


Additional Information

Database Acc Id Source(s)
NCBI Gene Rf4

RGD Curation Notes
Note Type Note Reference
qtl_statistics_details QTL is also significant for urine albumin excretion rate (LOD = 3.75) 70856