Aia3 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Aia3 (Adjuvant induced arthritis QTL 3) Rattus norvegicus

Symbol: Aia3
Name: Adjuvant induced arthritis QTL 3
RGD ID: 61476
Trait: joint integrity trait   (VT:0010548)    
Measurement Type: joint inflammation composite score   (CMO:0000919)    
LOD Score: 3.9
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2486,730,991 - 131,730,991RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0486,532,519 - 131,532,519RGD_MAPPER_PIPELINERnor6.0
Rnor_5.04151,024,194 - 196,024,194RGDRnor5.0
RGSC_v3.4473,972,453 - 133,939,659RGDRGSC3.4
RGSC_v3.1474,248,583 - 119,248,583RGD
Cross Type: F2
Strains Crossed: DA F344/NRrrc 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Candidate Gene Status
Npy is a candidate Gene for Aia3
Tcrb is a candidate Gene for Aia3

Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
DA  (IEA)
F344/NRrrc  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Mapping and functional characterization of rat chromosome 4 regions that regulate arthritis models and phenotypes in congenic strains. Backdahl L, etal., Arthritis Rheum 2003 Feb;48(2):551-9.
2. Quest for arthritis-causative genetic factors in the rat. Joe B Physiol Genomics. 2006 Oct 3;27(1):1-11. Epub 2006 Jun 27.
3. Localization of quantitative trait loci regulating adjuvant-induced arthritis in rats: evidence for genetic factors common to multiple autoimmune diseases. Kawahito Y, etal., J Immunol 1998 Oct 15;161(8):4411-9
4. A genome scan localizes five non-MHC loci controlling collagen-induced arthritis in rats. Remmers EF, etal., Nat Genet 1996 Sep;14(1):82-5
5. Identification of genomic regions controlling experimental autoimmune uveoretinitis in rats. Sun SH, etal., Int Immunol 1999 Apr;11(4):529-34
6. Genetic control of arthritis onset, severity and chronicity in a model for rheumatoid arthritis in rats. Vingsbo-Lundberg C, etal., Nat Genet 1998 Dec;20(4):401-4
7. Localization in rats of genetic loci regulating susceptibility to experimental erosive arthritis and related autoimmune diseases. Wilder RL, etal., Transplant Proc 1999 May;31(3):1585-8
8. The complexity in hunting for candidate genes within QTL that determine susceptibility to arthritis in rats. Xiong Q, etal., Crit Rev Immunol. 2008;28(2):127-57.
9. Genetic and molecular basis of quantitative trait loci of arthritis in rat: genes and polymorphisms. Xiong Q, etal., J Immunol. 2008 Jul 15;181(2):859-64.
Related QTLs

Related QTL Description Reference
Eau1 maps to same region RGD:61073
Pia5 interacts with RGD:61089
Cia3 interacts with RGD:61062
Scwia1 maps to same region RGD:61064


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3552Reg1aregenerating family member 1 alpha4110892451110895115Rat
3594Rpn1ribophorin I4120543667120565069Rat
62022Tmsb10thymosin, beta 104105009959105011095Rat
2316Cd8aCD8 subunit alpha4103365804103370041Rat
2317Cd8bCD8 subunit beta4103312596103328523Rat
70884Eif2ak3eukaryotic translation initiation factor 2 alpha kinase 34102805495102866914Rat
619998Tmem150atransmembrane protein 150A4104410271104414630Rat
3256Reg3gregenerating family member 3 gamma4110922805110927803Rat
619907Serbp1Serpine1 mRNA binding protein 149640158796421816Rat
2797Hk2hexokinase 24115234509115283530Rat
3903Trhthyrotropin releasing hormone4124742111124777094Rat
70918Klf15KLF transcription factor 154122965718122978403Rat
69339Nup210nucleoporin 2104123511558123609874Rat
3092Mitfmelanocyte inducing transcription factor4130409020130621145Rat
620026Il12rb2interleukin 12 receptor subunit beta 249642639696515251Rat
2664Gata2GATA binding protein 24120654205120667763Rat
69079Wnt7aWnt family member 7A4123863108123908981Rat
2654Gadd45agrowth arrest and DNA-damage-inducible, alpha49615478996157091Rat
2042Add2adducin 24118444594118538505Rat
621062Clec4fC-type lectin domain family 4, member F4116129023116138744Rat
708443Prokr1prokineticin receptor 14120022301120033367Rat
621133Vax2ventral anterior homeobox 24116195528116219597Rat
631345Abcg2ATP binding cassette subfamily G member 248767624187802757Rat
71039Mgllmonoglyceride lipase4121192186121294187Rat
621700Sftpbsurfactant protein B4104359303104368439Rat
621294Aldh1l1aldehyde dehydrogenase 1 family, member L14123059989123106471Rat
621668Grip2glutamate receptor interacting protein 24124271456124356538Rat
3811Tacr1tachykinin receptor 14114920844115089733Rat
708509Vom1r90vomeronasal 1 receptor 904122139053122148056Rat
628685Fbln2fibulin 24123704289123763857Rat
620419Vamp5vesicle-associated membrane protein 54104423813104435059Rat
68321Sec61a1SEC61 translocon subunit alpha 14120973519120987871Rat
2590Fabp1fatty acid binding protein 14103191015103194791Rat
620468Igkv28immunoglobulin kappa chain variable 284101302903101303452Rat
620172Frmd4bFERM domain containing 4B4129895401130222070Rat
620551Tmf1TATA element modulatory factor 14129759952129785705Rat
727874Rtknrhotekin4115640813115657952Rat
621605Nat8bN-acetyltransferase 8B4118359445118364351Rat
708572Arl6ip5ADP-ribosylation factor like GTPase 6 interacting protein 54129810650129838628Rat
620445Tgoln2trans-golgi network protein 24104663356104671208Rat
620421Vamp8vesicle-associated membrane protein 84104442383104452884Rat
621516Gng12G protein subunit gamma 1249601111896134767Rat
2546Egr4early growth response 44118047869118050328Rat
620960Hint1-ps1histidine triad nucleotide binding protein 1, pseudogene 149210099492101568Rat
628802Retsatretinol saturase4104653306104662069Rat
631379Cyp26b1cytochrome P450, family 26, subfamily b, polypeptide 14117041808117058628Rat
68373Ruvbl1RuvB-like AAA ATPase 14120932486120967400Rat
68383Ggcxgamma-glutamyl carboxylase4104469737104485631Rat
619821Suclg1succinate-CoA ligase GDP/ADP-forming subunit alpha4105308236105337595Rat
708351Kdm3alysine demethylase 3A4103630907103675073Rat
621609Nat8N-acetyltransferase 84118279521118284671Rat
621084Uba3ubiquitin-like modifier activating enzyme 34129789526129810707Rat
621607Nat8f3N-acetyltransferase 8 (GCN5-related) family member 34118241792118246010Rat
735014Gkn1gastrokine 14119790101119795389Rat
1304825Fam136afamily with sequence similarity 136, member A4118805129118811046Rat
621171Anxa4annexin A44119184378119241183Rat
708391Vom1r97vomeronasal 1 receptor 974122361863122364034Rat
620586Rnf103ring finger protein 1034103526456103542529Rat
628706Sfxn5sideroflexin 54117750213117869826Rat
620875St3gal5ST3 beta-galactoside alpha-2,3-sialyltransferase 54104134613104192558Rat
1304561Chchd6coiled-coil-helix-coiled-coil-helix domain containing 64121803501122024209Rat
708384Vom1r102vomeronasal 1 receptor 1024122537934122545602Rat
708395Vom1r101vomeronasal 1 receptor 1014122499102122500235Rat
61912Slc6a6solute carrier family 6 member 64124195186124268880Rat
1303009Slc4a5solute carrier family 4 member 54115710101115810330Rat
708556Chmp3charged multivesicular body protein 34103576453103622566Rat
620858Tpra1transmembrane protein adipocyte associated 14121364093121375275Rat
3201Nr2c2nuclear receptor subfamily 2, group C, member 24124610216124666813Rat
3254Reg3bregenerating family member 3 beta4110861775110865015Rat
621606Nat8f1N-acetyltransferase 8 (GCN5-related) family member 14118336208118342923Rat
621401Reg3aregenerating islet-derived 3 alpha4110872398110875157Rat
69240Mogsmannosyl-oligosaccharide glucosidase4115621623115625026Rat
621610Nat8f5N-acetyltransferase 8 (GCN5-related) family member 54118260323118285038Rat
735071RSA-14-44RSA-14-44 protein49525165795253029Rat
621797Dnah6dynein, axonemal, heavy chain 64105064123105284361Rat
3729Sncasynuclein alpha48969642089797240Rat
3849Tgfatransforming growth factor alpha4118618043118700897Rat
61908Rab7aRAB7A, member RAS oncogene family4120461966120510756Rat
69251Hpgdshematopoietic prostaglandin D synthase49436842694397931Rat
620824Polr1aRNA polymerase I subunit A4103950051104014022Rat
628652Pcyox1prenylcysteine oxidase 14118832114118842951Rat
68368Grid2glutamate ionotropic receptor delta type subunit 249241501993892472Rat
621807CnbpCCHC-type zinc finger, nucleic acid binding protein4120302768120311694Rat
62038Dctn1dynactin subunit 14115671024115703824Rat
1307803Herc3HECT and RLD domain containing E3 ubiquitin protein ligase 348795220288042492Rat
1305008Suclg2succinate-CoA ligase GDP-forming subunit beta4128067031128337146Rat
1306723Prickle2prickle planar cell polarity protein 24124869655125214862Rat
1305577Mcm2minichromosome maintenance complex component 24121346434121360962Rat
1305851Tex261testis expressed 2614116253547116260730Rat
1304792Gcfc2GC-rich sequence DNA-binding factor 24114481613114519268Rat
1304799Dguokdeoxyguanosine kinase4115987101116014733Rat
1305589Fgd5FYVE, RhoGEF and PH domain containing 54124497061124594564Rat
1307014Mob1aMOB kinase activator 1A4115831581115848561Rat
1305742Tia1TIA1 cytotoxic granule-associated RNA binding protein4118852765118883252Rat
1305105Smyd1SET and MYND domain containing 14103195330103252989Rat
1305815Podxl2podocalyxin-like 24121306224121338070Rat
1306408Elmod3ELMO domain containing 34104614665104653122Rat
1305760XpcXPC complex subunit, DNA damage recognition and repair factor4123993670124020922Rat
1306746C4h2orf42similar to human chromosome 2 open reading frame 424118887688118916808Rat
1306422Cct7chaperonin containing TCP1 subunit 74117989232118006478Rat
1307065Mrpl35mitochondrial ribosomal protein L354103865812103876687Rat
1307592Lin28clin-28 homolog C (C. elegans)49541756695420497Rat
1305057NagkN-acetylglucosamine kinase4116281179116293870Rat
1305060Ctnna2catenin alpha 24109294249110443409Rat
1307688Isy1ISY1 splicing factor homolog4120276535120297227Rat
1304961Wbp1WW domain binding protein 14115625168115627567Rat
3753Sprsepiapterin reductase4117671948117676292Rat
1308770Mrps25mitochondrial ribosomal protein S254124668320124680086Rat
1307038Dusp11dual specificity phosphatase 114118367673118385183Rat
2027Actg2actin gamma 2, smooth muscle4116021832116046475Rat
1307793Pole4DNA polymerase epsilon 4, accessory subunit4115165285115171097Rat
1306709Mrpl53mitochondrial ribosomal protein L534115615329115616219Rat
1334150Or6c235-ps1olfactory receptor family 6 subfamily C member 235, pseudogene 14105479255105480121Rat
1311706Hdac11histone deacetylase 114123645873123667407Rat
1308501Ppm1kprotein phosphatase, Mg2+/Mn2+ dependent, 1K48761219887638993Rat
1309746Zfp638zinc finger protein 6384116355934116475051Rat
1560552Eefseceukaryotic elongation factor, selenocysteine-tRNA-specific4120719616120915779Rat
1305225Ccdc174coiled-coil domain containing 1744124392183124419035Rat
1308103Usp39ubiquitin specific peptidase 394104373948104406359Rat
1308906Htra2HtrA serine peptidase 24115556914115560202Rat
1359401Vom1r95vomeronasal 1 receptor 954122285444122286388Rat
1309144Thnsl2threonine synthase-like 24103112974103132122Rat
1309153Smyd5SMYD family member 54117969615117984082Rat
1309807Fam13afamily with sequence similarity 13, member A48805652188155782Rat
1560707Lrrtm4leucine rich repeat transmembrane neuronal 44112545874113338713Rat
1311724Capgcapping actin protein, gelsolin like4104594743104611856Rat
1309786TprkbTp53rk binding protein4118342910118357908Rat
1306889Adamts9ADAM metallopeptidase with thrombospondin type 1 motif, 94125290633125462988Rat
1311080Ndnfneuron-derived neurotrophic factor49494439294981871Rat
1549782Pcgf1polycomb group ring finger 14115576165115587019Rat
1359215Vom1r89vomeronasal 1 receptor 8949594262695943550Rat
1310925Snrnp27small nuclear ribonucleoprotein U4/U6.U5 subunit 274119123676119133234Rat
1310809Lancl2LanC like glutathione S-transferase 248744182187483707Rat
1310746Chchd4coiled-coil-helix-coiled-coil-helix domain containing 44123968264123977398Rat
1359357EogtEGF domain specific O-linked N-acetylglucosamine transferase4129718897129756558Rat
1359363Abtb1ankyrin repeat and BTB domain containing 14121299302121305667Rat
1308363Txnrd3thioredoxin reductase 34122072548122112493Rat
1310889Mad2l1mitotic arrest deficient 2 like 149590669295918885Rat
1308669Foxp1forkhead box P14131559599132155092Rat
1549781Vom1r96vomeronasal 1 receptor 964122334287122335270Rat
1307823Nfu1NFU1 iron-sulfur cluster scaffold4119458981119480162Rat
1305230Reep1receptor accessory protein 14103746004103862347Rat
1310619Atp6v1b1ATPase H+ transporting V1 subunit B14116223799116242475Rat
1311313Mthfd2methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase4115811135115822663Rat
1309499Dok1docking protein 14115537453115540464Rat
1311590Alms1ALMS1, centrosome and basal body associated protein4118125581118226005Rat
1305971Lsm3LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated4124021023124027269Rat
1305975Bola3bolA family member 34115853350115862797Rat
1306494Vopp1VOPP1 WW domain binding protein48736367887432747Rat
1306495Krcc1lysine-rich coiled-coil 14103261642103274672Rat
1307144Antxr1ANTXR cell adhesion molecule 14119590770119778232Rat
1311377Rpiaribose 5-phosphate isomerase A4102723712102749374Rat
1306788Lrig1leucine-rich repeats and immunoglobulin-like domains 14127130899127230956Rat
1305768Cfap100cilia and flagella associated protein 1004122914693122938994Rat
1309640Smarcad1SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1`49431144194379184Rat
1310684Immtinner membrane mitochondrial protein4103880482103919116Rat
619963StambpStam binding protein4116055563116083563Rat
1307930Paip2bpoly(A) binding protein interacting protein 2B4116292001116323387Rat
1308811Slc25a26solute carrier family 25 member 264127036704127131026Rat
1305520Aak1AP2 associated kinase 14119300128119451834Rat
1309766Rmnd5arequired for meiotic nuclear division 5 homolog A4103375846103432890Rat
619985Mat2amethionine adenosyltransferase 2A4104489877104495447Rat
1305397Rbsnrabenosyn, RAB effector4124682228124712578Rat
1562986Bmp10bone morphogenetic protein 104119872066119877694Rat
1564525Mxd1max dimerization protein 14119097353119118080Rat
1563166Kbtbd8kelch repeat and BTB domain containing 84127675967127688785Rat
1560871Plxna1plexin A14121737934121782901Rat
1560289C4h3orf20similar to human chromosome 3 open reading frame 204124422033124470657Rat
1562720Spmip9sperm microtubule inner protein 94102885695102892934Rat
1564754Figlafolliculogenesis specific bHLH transcription factor4118432517118436846Rat
1562258Ino80bINO80 complex subunit B4115627907115631069Rat
1560795Spr-ps1sepiapterin reductase, pseudogene 14117689458117693286Rat
1559797Eva1aeva-1 homolog A, regulator of programmed cell death4114593773114643011Rat
1561981Dnajb8DnaJ heat shock protein family (Hsp40) member B84120681918120685108Rat
1561547Igkvl16immunoglobulin kappa variable like 164100511688100512362Rat
1561200Ankrd53ankyrin repeat domain 534116245561116253018Rat
1561512Atoh8atonal bHLH transcription factor 84104259992104292168Rat
1561816Foxi3forkhead box I34102933487102937655Rat
1565913Cd207CD207 molecule4116155229116161587Rat
1566019C4h2orf81similar to human chromosome 2 open reading frame 814115661617115667929Rat
1562716Tcp1-ps1t-complex protein 1, pseudogene 14120705645120707221Rat
1560028Qrfprlpyroglutamylated RFamide peptide receptor like49467837094757034Rat
1563231Igkv2-112l2immunoglobulin kappa variable 2-112 like 24102208069102208647Rat
1561494Wdr54WD repeat domain 544115654968115677979Rat
1564002Emx1empty spiracles homeobox 14117725148117741616Rat
1359698Rnf181ring finger protein 1814104414586104421433Rat
1561296ZxdcZXD family zinc finger C4122882389122914486Rat
1565731Ccser1coiled-coil serine-rich protein 149015387391391441Rat
1560859Asprv1aspartic peptidase, retroviral-like 14119077415119078887Rat
1561779Ccdc142coiled-coil domain containing 1424115606151115616223Rat
1563162Rps7-ps20ribosomal protein S7, pseudogene 2048759277387602036Rat
1561172Lbx2ladybird homeobox 24115591974115593859Rat
1311011Loxl3lysyl oxidase-like 34115540640115556958Rat
1359498Tacstd2tumor-associated calcium signal transducer 249670795096709650Rat
1311023Dysfdysferlin4116490877116690709Rat
1561319Pcbp1poly(rC) binding protein 14118972698118974705Rat
1311934Gkn2gastrokine 24119778326119824366Rat
1359098Vom1r94vomeronasal 1 receptor 944122274165122275145Rat
1359257Vom1r79vomeronasal 1 receptor 7948691076686912251Rat
1359265Gmcl1germ cell-less 1, spermatogenesis associated4119140598119179891Rat
1562825Chst13carbohydrate sulfotransferase 134122824022122837940Rat
1564292Nop2-ps4NOP2 nucleolar protein, pseudogene 44128479630128481920Rat
1311671Tcf7l1transcription factor 7 like 14104680734104846086Rat
1549694Vom1r98vomeronasal 1 receptor 984122375967122376911Rat
1549695Vom1r74vomeronasal 1 receptor 7448674378186744692Rat
1549696Vom1r86vomeronasal 1 receptor 8648719852587199433Rat
1549699Vom1r88vomeronasal 1 receptor 8848734693387347826Rat
1549703Gfpt1glutamine fructose-6-phosphate transaminase 14119496691119546472Rat
1549704Vom1r78vomeronasal 1 receptor 7848687204986872966Rat
1549711Tmem43transmembrane protein 434123977680123992823Rat
1549714Vom1r76vomeronasal 1 receptor 7648678181586782714Rat
1560638Exoc6bexocyst complex component 6B4117094741117550221Rat
1549740Vom1r93vomeronasal 1 receptor 934122234616122242958Rat
1549746Vom1r82vomeronasal 1 receptor 8248704874187049637Rat
1549747Vom1r80vomeronasal 1 receptor 8048695493486955833Rat
1359218Vom1r77vomeronasal 1 receptor 7748680140086802317Rat
1559800Hmces5-hydroxymethylcytosine binding, ES cell specific4120392812120415616Rat
1549727Vom1r100vomeronasal 1 receptor 1004122468150122471495Rat
1549731Vom1r83vomeronasal 1 receptor 8348711393687114844Rat
1549732Vom1r85vomeronasal 1 receptor 8548716095987161867Rat
1563030Tafa1TAFA chemokine like family member 14128738028129244223Rat
1549753Vom1r84vomeronasal 1 receptor 8448713607487136982Rat
1549756Vom1r87vomeronasal 1 receptor 8748725552587256433Rat
1562105Arhgap25Rho GTPase activating protein 254119896844119974982Rat
1564699Hmgb1-ps19high-mobility group box 1, pseudogene 1949574279595743265Rat
1549765Vom1r81vomeronasal 1 receptor 8148697716786978099Rat
1563842M1apmeiosis 1 associated protein4115445910115536745Rat
1560845Vom1r-ps73vomeronasal 1 receptor pseudogene 7348706579587066329Rat
3658Sema4fssemaphorin 4F4115411411115437721Rat
1583000Eef1g-ps15eukaryotic translation elongation factor 1 gamma, pseudogene 154127841801127847162Rat
1587381Mrpl19mitochondrial ribosomal protein L194114521824114526053Rat
1587188Eif4g1-ps3eukaryotic translation initiation factor 4 gamma 1, pseudogene 349559026595592593Rat
1587189Nono-ps10non-POU domain containing, octamer-binding, pseudogene 1049415739794158751Rat
1587190Vom1r-ps74vomeronasal 1 receptor pseudogene 7448723150487232398Rat
1559612Tigd2tigger transposable element derived 248841436688417458Rat
1585860Smokxl-ps3sperm motility kinase X like, pseudogene 34117569008117569987Rat
1584754Rpl6-ps15ribosomal protein L6, pseudogene 154108858856108967329Rat
1585901Hnrnpc-ps3heterogeneous nuclear ribonucleoprotein C, pseudogene 34107575688107585650Rat
1565524PyurfPIGY upstream open reading frame48750185987505494Rat
1585997Elob-ps12elongin B, pseduogene 124126816689126817049Rat
1585998Hmgb2-ps2high mobility group box 2, pseudogene 24122120684122121727Rat
1585999Kbtbd12kelch repeat and BTB domain containing 124121014636121088701Rat
1586000Rps15-ps12ribosomal protein S15, pseudogene 124116373761116374229Rat
1586001Plin3-ps2perilipin 3, pseudogene 24113755510113756823Rat
1586002Cactin-ps3cactin, spliceosome C complex subunit, pseudogene 34106867095106868859Rat
1586003Igkvl5immunoglobulin kappa variable like 54101805860101806662Rat
1586004Fbl-ps6fibrillarin, pseudogene 64101510664101511950Rat
1583112Pradc1protease-associated domain containing 14117984732117989710Rat
1584713Snrpgsmall nuclear ribonucleoprotein polypeptide G4118812278118819827Rat
1586441Rplp0-ps15ribosomal protein lateral stalk subunit P0, pseudogene 154126179018126180835Rat
1587245Tuba1b-ps8tubulin, alpha 1B, pseudogene 84103340394103341605Rat
1587247Fbl-ps5fibrillarin, pseudogene 54101138821101139593Rat
1587248Mmrn1multimerin 148987540889950814Rat
1587249Ppid-ps16peptidylprolyl isomerase D, pseudogene 1648785508187856880Rat
1587250Tubg1-ps4tubulin, gamma 1, pseudogene 448695738286958820Rat
1584123Nap1l5nucleosome assembly protein 1-like 548802267088024988Rat
1583218Rps25l3ribosomal protein S25 like 34120933765120934259Rat
1564924Lmod3leiomodin 34129843964129858684Rat
1587427Sh2d6SH2 domain containing 64104566210104574176Rat
1561722Igkvl2immunoglobulin kappa variable like 249813078798131675Rat
1564696Igkvl6immunoglobulin kappa variable like 64102304440102305139Rat
1566130Fbxo41F-box protein 414118007517118039547Rat
1562910Notonotochord homeobox4117961163117965402Rat
1562515JkamplJNK1/MAPK8 associated membrane protein like4105520442105521542Rat
1565292Copg1COPI coat complex subunit gamma 14120366540120392502Rat
1565171Atoh1atonal bHLH transcription factor 149391206893914163Rat
1565582Ptcd3Pentatricopeptide repeat domain 34103922440103957445Rat
1561739Herc6HECT and RLD domain containing E3 ubiquitin protein ligase family member 648752447087566895Rat
1565557Aplfaprataxin and PNKP like factor4120070471120122656Rat
1565690Gprin3GPRIN family member 348857206288657369Rat
1584384Tma7l1translation machinery associated 7 homolog like 14118986414118988248Rat
1564573Vom1r92vomeronasal 1 receptor 924122212290122225494Rat
1565596H1f10H1.10 linker histone4120440515120441578Rat
1565300Rab43RAB43, member RAS oncogene family4120249650120269174Rat
1561619Nat8f2N-acetyltransferase 8 (GCN5-related) family member 24118319984118323159Rat
1592965Rps27a-ps18ribosomal protein S27a, pseudogene 184115353266115353807Rat
1586368Il23rinterleukin 23 receptor49658056896672540Rat
1591392Prr20eproline rich 20E4121566632121574734Rat
1589573Slc41a3solute carrier family 41, member 34123109555123154766Rat
1590584Tet3tet methylcytosine dioxygenase 34115867412115964433Rat
1591097Eno1-ps7enolase 1, pseudogene 748987254889873844Rat
1585921LRRTM1leucine rich repeat transmembrane neuronal 14109701815109718924Rat
1587777Uroc1urocanate hydratase 14122844933122876584Rat
1587811C4h3orf22similar to human chromosome 3 open reading frame 224122817681122822175Rat
1587471C4h2orf68similar to human chromosome 2 open reading frame 684104402553104408317Rat
1584703Ass1-ps2argininosuccinate synthase 1, pseudogene 24117912849117927565Rat
1588449C17h6orf62-ps1similar to human chromosome 6 open reading frame 62, pseudogene 14101258582101259187Rat
1586032Shc1-ps1SHC adaptor protein 1, pseudogene 14105988811105991749Rat
1586033Ptbp1-ps3polypyrimidine tract binding protein 1, pseudogene 34105696627105698961Rat
1587829Vom1r104vomeronasal 1 receptor 1044122768885122769850Rat
1587548Havcr1-ps1hepatitis A virus cellular receptor 1, pseudogene 149563296895633283Rat
1589006Vom1r99vomeronasal 1 receptor 994122430887122431711Rat
1586024Hnrnpa1-ps45heterogeneous nuclear ribonucleoprotein A1, pseudogene 454127704697127705507Rat
1586025Magi1membrane associated guanylate kinase, WW and PDZ domain containing 14126205663126811354Rat
1586026Emilin1-ps1elastin microfibril interfacer 1, pseudogene 14118262387118266491Rat
1586028Ldha-ps9lactate dehydrogenase A, pseudogene 94113345717113349041Rat
1588732Tnip3TNFAIP3 interacting protein 349486725894908780Rat
1596167Vom1r-ps72vomeronasal 1 receptor pseudogene 7248701153087012437Rat
1592069Rab11fip5RAB11 family interacting protein 54117871301117908819Rat
1597453Hsp90aa1-ps1heat shock protein 90 alpha family class A member 1, pseudogene 148679106886796467Rat
1597443Tafa4TAFA chemokine like family member 44129437466129671320Rat
1591766Dqx1DEAQ box RNA-dependent ATPase 14115563497115572598Rat
1593482Acbd5-ps1acyl-CoA binding domain containing 5, pseudogene 148826755188268264Rat
1592227Eif5-ps10eukaryotic translation initiation factor 5, pseudogene 104101363702101365081Rat
1596846Rps25-ps8ribosomal protein S25, pseudogene 84115473792115474236Rat
1596849Vom1r-ps111vomeronasal 1 receptor pseudogene 11148730700087307908Rat
1588783Ptma-ps1prothymosin alpha, pseudogene 149406540194065784Rat
1595506Tlx2T-cell leukemia homeobox 24115573736115576097Rat
1588700Prdm5PR/SET domain 549507573695237921Rat
1590113Apool2apolipoprotein O-like 24127274472127275699Rat
1591490Kcmf1potassium channel modulatory factor 14104888452104950234Rat
1591777Aup1AUP1, lipid droplet regulating VLDL assembly factor4115560274115563346Rat
1597311Gtdc1-ps1glycosyltransferase-like domain containing 1, pseudogene 14102443892102445203Rat
1561601Gp9glycoprotein IX (platelet)4120235500120237110Rat
1597754Gkn3gastrokine 34119828859119833924Rat
1596494Efcc1EF-hand and coiled-coil domain containing 14120188202120223464Rat
1595483Rps9-ps10ribosomal protein S9, pseudogene 104113401645113402234Rat
1596313Iqsec1IQ motif and Sec7 domain ArfGEF 14123168719123488300Rat
1594207Got2l1glutamatic-oxaloacetic transaminase 2, mitochondrial like 14114189936114190548Rat
2316381Vom1r-ps87vomeronasal 1 receptor pseudogene 874123930673123931299Rat
2316382Vom1r-ps86vomeronasal 1 receptor pseudogene 864122686949122687878Rat
2316383Vom1r-ps85vomeronasal 1 receptor pseudogene 854122625876122626474Rat
2316384Vom1r-ps84vomeronasal 1 receptor pseudogene 844122613355122614266Rat
2316385Vom1r-ps83vomeronasal 1 receptor pseudogene 834122608252122609154Rat
2316386Vom1r-ps82vomeronasal 1 receptor pseudogene 824122595522122596518Rat
2316387Vom1r-ps81vomeronasal 1 receptor pseudogene 814122586021122586924Rat
2316388Vom1r-ps80vomeronasal 1 receptor pseudogene 804122396580122396744Rat
2316389Vom1r-ps79vomeronasal 1 receptor pseudogene 794122394932122395749Rat
2316390Vom1r-ps78vomeronasal 1 receptor pseudogene 784122370207122371034Rat
2316391Vom1r-ps77vomeronasal 1 receptor pseudogene 774122311684122312578Rat
2316392Vom1r-ps76vomeronasal 1 receptor pseudogene 764108297905108298689Rat
2316408Vom1r103vomeronasal 1 receptor 1034122723226122730713Rat
2319759Tmem94-ps1transmembrane protein 94, pseudogene 14104043649104046004Rat
2319160Dynll1l1dynein light chain LC8-type 1 like 14126581958126582522Rat
2319874Reg3b-ps1regenerating family member 3 beta, pseudogene 14110867647110870075Rat
2318882Igkvl13immunoglobulin kappa variable like 134101432815101433399Rat
2320195Ssbp1-ps1single stranded DNA binding protein 1, pseudogene 14126884577126890225Rat
2319569Igkvl14immunoglobulin kappa variable like 144100487837100488968Rat
2319042LOC100365438mCG141619-like4101478715101479376Rat
2320327Igkvl-ps21immunoglobulin kappa variable like, pseudogene 214100209006100209643Rat
2320349Tra2b-ps2transformer 2 beta, pseudogene 24108405683108421146Rat
2321310Igkvl11immunoglobulin kappa variable like 114102343796102344458Rat
2322105Senp6-ps1SUMO specific peptidase 6, pseudogene 148855134588555553Rat
2323419Polr2m-ps3RNA polymerase II subunit M, pseudogene 34122141718122144244Rat
2320685Slc25a39-ps8solute carrier family 25 member 39, pseudogene 84107360735107361799Rat
2322825Igkv2-112l1immunoglobulin kappa variable 2-112 like 149780939697810460Rat
2322888Rpl22-ps2ribosomal protein L22, pseudogene 24119350419119350883Rat
2323009Mdfic2MyoD family inhibitor domain containing 24130845260130948054Rat
2320855Mak16-ps1MAK16 homolog, pseudogene 149936447499369594Rat
2320908Igkvl7immunoglobulin kappa variable like 74102446979102447648Rat
2321092Igkvl1immunoglobulin kappa variable like 149994200399942688Rat
2321912Ppp6c-ps1protein phosphatase 6, catalytic subunit, pseuidogene 148997047089997261Rat
2323358Igkvl3immunoglobulin kappa variable like 349938974799390292Rat
2324329Nat8-ps1N-acetyltransferase 8, pseudogene 14118303631118305781Rat
2323735Gsta4-ps4glutathione S-transferase alpha 4, pseudogene 44120318859120320679Rat
2323785Cfap92cilia and flagella associated protein 924120126565120181575Rat
2324539Igkcl1immunoglobulin kappa constant like 14101065901101066416Rat
2323903Psma3-ps3proteasome 20S subunit alpha 3, pseudogene 34127029644127030164Rat
6488311LOC100912188uncharacterized LOC10091218849615649096204457Rat
6493044LOC100911370uncharacterized LOC1009113704114459942114463108Rat
6495277Igkvl12immunoglobulin kappa variable like 1249800125798002145Rat
6497663LOC100910604uncharacterized LOC1009106044120187658120188705Rat
7524413LOC102546367uncharacterized LOC1025463674104166361104168839Rat
7521956Znf431l-ps5zinc finger protein 431 like, pseudogene 54100210123100220831Rat
7508836LOC102549269uncharacterized LOC1025492694128652499128742024Rat
7512196Vom1r97l1vomeronasal 1 receptor 97 like 14122166102122172598Rat
7539827LOC102548902uncharacterized LOC1025489024124160535124201206Rat
7520921Prdx6-ps2peroxiredoxin 6, pseudogene 24114684131114684952Rat
7647571Zmat1l1zinc finger, matrin-type 1 like 14103292937103297980Rat
7650153LOC102552138uncharacterized LOC1025521384120450176120462899Rat
7650908LOC102548361uncharacterized LOC1025483614115950040115953954Rat
7636572Nat8f4N-acetyltransferase 8 (GCN5-related) family member 44118326092118332591Rat
7639290Phb1-ps4prohibitin 1, pseudogene 44105082392105084201Rat
7609272LOC102554878uncharacterized LOC1025548784121271560121272968Rat
7643253Rrs1-ps7ribosome biogenesis regulator 1 homolog, pseudogene 74128616299128619872Rat
7661237LOC102554570uncharacterized LOC1025545704125334112125359366Rat
7589793LOC102554318uncharacterized LOC1025543184118942068118966369Rat
7590189LOC102555978uncharacterized LOC1025559784125459772125773012Rat
7591615LOC102555035uncharacterized LOC1025550354121464929121479571Rat
7547913LOC102549328uncharacterized LOC1025493284118400779118416614Rat
7562079LOC102554068uncharacterized LOC1025540684120590582120622585Rat
7562795LOC102549458uncharacterized LOC1025494584104767270104769717Rat
7550029LOC102555094uncharacterized LOC1025550944121511450121516890Rat
7583063LOC102549525uncharacterized LOC1025495254102802796102805439Rat
7552576Stxbp3-ps1syntaxin binding protein 3, pseudogene 14111049442111054421Rat
7553480LOC102554857uncharacterized LOC1025548574124441221124498179Rat
7553872LOC102556495uncharacterized LOC1025564954104131807104134481Rat
7706369Hdac2-ps1histone deacetylase 2, pseudogene 14102624284102625962Rat
7708743LOC102556090uncharacterized LOC1025560904111069839111075961Rat
7688358LOC102556035uncharacterized LOC1025560354110915998110999186Rat
7711844LOC102547728uncharacterized LOC1025477284115172801115177968Rat
7667063LOC102554372uncharacterized LOC1025543724119012925119030617Rat
7696532LOC102554942uncharacterized LOC1025549424121401011121454903Rat
7718040LOC102548304uncharacterized LOC1025483044115678692115692726Rat
7699711LOC102549526uncharacterized LOC1025495264104672363104687654Rat
7727476LOC102549052low molecular weight phosphotyrosine protein phosphatase-like4103247606103251384Rat
9102747Igkvl-ps16immunoglobulin kappa variable like, pseudogene 1649734899497349801Rat
9070006LOC103692189uncharacterized LOC1036921894126124290126129626Rat
9142253Ybx1-ps2Y box binding protein 1, pseudogene 24118133614118134832Rat
9124640LOC10369217960S ribosomal protein L34 pseudogene4120362254120362604Rat
9351699LOC10369489440S ribosomal protein S6 pseudogene48681994286820686Rat
9386529Ywhaq-ps4tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta, pseudogene 449449111694491862Rat
9290612LOC10369214440S ribosomal protein S6 pseudogene48684360986845120Rat
9252280LOC103692180uncharacterized LOC1036921804120584341120590943Rat
9252629Igkvl-ps12immunoglobulin kappa variable like, pseudogene 124101726300101727506Rat
9301889LOC103692187uncharacterized LOC1036921874124712546124722083Rat
9264819Tshr-ps1thyroid stimulating hormone receptor, pseudogene 149214265692143138Rat
9330732Ndufb3l1NADH:ubiquinone oxidoreductase subunit B3 like 149782873997829070Rat
9389444Vax2lventral anterior homeobox 2 like4116178416116195253Rat
9438141Igkvl8immunoglobulin kappa variable like 849711573297119085Rat
9439280Igkvl9immunoglobulin kappa variable like 949757291097573408Rat
11355186LOC108350864ATP synthase subunit g, mitochondrial pseudogene4104555149104555540Rat
11081189Nup50-ps1nucleoporin 50, pseudogene 14128787567128789296Rat
11051993Igkvl-ps11immunoglobulin kappa variable like, pseudogene 1149858862498589555Rat
11468430Trnas-gcu6transfer RNA serine (anticodon GCU) 64106831010106831091Rat
11472949LOC108350866uncharacterized LOC1083508664105957318105981816Rat
11458713Igkvl-ps2immunoglobulin kappa variable like, pseudogene 24100774851100775585Rat
11437638LOC10835072260S ribosomal protein L27 pseudogene4116278373116281125Rat
11051991Igkvl-ps10immunoglobulin kappa variable like, pseudogene 1049976417199765272Rat
11051998Igkvl-ps18immunoglobulin kappa variable like, pseudogene 184101003409101004411Rat
11362919Igkvl-ps13immunoglobulin kappa variable like, pseudogene 1349696857496969477Rat
11450417LOC108350840uncharacterized LOC10835084049087966590931441Rat
11364654Igkvl-ps17immunoglobulin kappa variable like, pseudogene 1749749492997495415Rat
11051987Igkvl-ps20immunoglobulin kappa variable like, pseudogene 204101195589101196676Rat
11051990Igkvl-ps1immunoglobulin kappa variable like, pseudogene 14100900754100901355Rat
11052016Igkvl10immunoglobulin kappa variable like 1049791651997917533Rat
11052049LOC690813Ig kappa chain V-IV region-like4101838285101839132Rat
11451272LOC108350862uncharacterized LOC10835086248876271388780061Rat
11440908LOC108350839high mobility group protein B1-like49130690291309095Rat
11421296LOC10835086960S ribosomal protein L31 pseudogene4116921291116921723Rat
11385872LOC108350868glyceraldehyde-3-phosphate dehydrogenase pseudogene4110616441110617544Rat
11398915Trnal-aag2transfer RNA leucine (anticodon AAG) 24127454175127454256Rat
11410861Rps11-ps14ribosomal protein S11, pseudogene 144124395855124398410Rat
11402703Rpl27a-ps5ribosomal protein L27a, pseudogene 54108745019108755613Rat
11405111Vom1r75vomeronasal 1 receptor 7548675662486757556Rat
11383082Igkvl-ps19immunoglobulin kappa variable like, pseudogene 194100736032100736741Rat
11502286LOC108350725uncharacterized LOC1083507254118778620118792730Rat
11508600Trnag-ccc4transfer RNA glycine (anticodon CCC) 44118852419118852489Rat
11508794LOC108350727uncharacterized LOC1083507274120415759120430399Rat
11497379Igkvl4immunoglobulin kappa variable like 44101645320101645700Rat
11518313LOC108350719uncharacterized LOC1083507194115639631115642945Rat
11488278LOC108350721uncharacterized LOC1083507214116211039116218830Rat
41321497LOC120102565U6 spliceosomal RNA4109168372109168478Rat
41353377LOC120102733small nucleolar RNA SNORA1749823881598238917Rat
41378383LOC120102307uncharacterized LOC1201023074102761831102791308Rat
41166952LOC120102316uncharacterized LOC1201023164115098139115106023Rat
41167200Vom1r114vomeronasal 1 receptor 11344122679045122680064Rat
41234562LOC120102340uncharacterized LOC1201023404121723881121732860Rat
41282493LOC120102708small nucleolar RNA SNORA174117652870117652993Rat
41323200LOC120102581U6 spliceosomal RNA49528482095284926Rat
41323307LOC120102777U4 spliceosomal RNA4105038037105038123Rat
41323577LOC120102314uncharacterized LOC1201023144111407391111454991Rat
41355210LOC120102710small nucleolar RNA SNORA174123361345123361441Rat
41112623LOC120102736small nucleolar RNA SNORA1749717502897175121Rat
41113583LOC120102728small nucleolar RNA SNORA1749681038496810504Rat
41169229LOC120102722small nucleolar RNA SNORA1749826317398263300Rat
41205249Rnu6-936RNA, U6 small nuclear 93649920039799200501Rat
41250383LOC120102287uncharacterized LOC12010228748794191487952110Rat
41277236LOC120102585U6 spliceosomal RNA49914578099145884Rat
41381715LOC120102288uncharacterized LOC12010228848944218589475598Rat
41381944LOC120102305uncharacterized LOC1201023054101437202101439905Rat
41383162LOC120102335uncharacterized LOC1201023354120733062120737659Rat
41114178LOC120102583U6 spliceosomal RNA49926872299268826Rat
41141586LOC120102311uncharacterized LOC1201023114105288960105294181Rat
41170451LOC120102696small nucleolar RNA SNORA1749713082197130958Rat
41251011LOC120102700small nucleolar RNA SNORA1749709688597097017Rat
41326110LOC120102327uncharacterized LOC1201023274118919046118930645Rat
41358316LOC120102632small nucleolar RNA SNORA36 family4104895641104895763Rat
41172269LOC120102644U11 spliceosomal RNA4110662076110662209Rat
41253364LOC120102725small nucleolar RNA SNORA1749858397298584104Rat
41327009LOC120102729small nucleolar RNA SNORA1749800423498004360Rat
41359859LOC120102324uncharacterized LOC1201023244117723370117725707Rat
41386173Trnal-aag20transfer RNA leucine (anticodon AAG) 2049503448895034569Rat
41091703Fbl-ps4fibrillarin, pseudogene 44101416548101417555Rat
41091722LOC120102670small nucleolar RNA SNORA174125861717125861845Rat
41116383LOC120102170thymosin beta-10-like4104962822104963289Rat
41327928Rnu6-433RNA, U6 small nuclear 4334131099002131099108Rat
41328136LOC120102650small nucleolar RNA SNORA4849582653795826676Rat
41361057Rpl21-ps8ribosomal protein L21, pseudogene 849578372795784432Rat
41388537LOC120102326uncharacterized LOC1201023264118416642118424029Rat
41389009LOC120102554U4 spliceosomal RNA4105248170105248327Rat
41362761Igkvl-ps8immunoglobulin kappa variable like, pseudogene 849953181099532249Rat
41094682LOC120102721small nucleolar RNA SNORA1749813375998133886Rat
41120297LOC120102574U6 spliceosomal RNA4102735624102735728Rat
41120707LOC120102598U6 spliceosomal RNA49921932699219429Rat
41120855LOC120102337uncharacterized LOC1201023374121604758121615075Rat
41176189LOC120102561U6 spliceosomal RNA4104156903104157009Rat
41364677LOC120102648small nucleolar RNA SNORA484102978143102978286Rat
41365694Igkvl-ps7immunoglobulin kappa variable like, pseudogene 749896141998965084Rat
41096961LOC120102643small nucleolar RNA SNORA514111475412111475543Rat
41121066Fam50a-ps1family with sequence similarity 50, member A, pseudogene 14106608389106609566Rat
41121586LOC120102292uncharacterized LOC12010229249643512196439487Rat
41121964Cox6c-ps3cytochrome c oxidase subunit 6C, pseudogene 34127416018127417910Rat
41150042LOC120102331uncharacterized LOC1201023314120353804120366389Rat
41150073LOC120102639small nucleolar RNA SNORA2/SNORA34 family4118815877118816012Rat
41153665LOC120102642small nucleolar RNA SNORA294120707367120707503Rat
41177686LOC120102309uncharacterized LOC1201023094104285634104289300Rat
41178684Prune2-ps1prune homolog 2 with BCH domain, pseudogene 14130327921130328679Rat
41263255LOC120102348uncharacterized LOC1201023484129815657129821673Rat
41263518Igkvl-ps5immunoglobulin kappa variable like, pseudogene 549887513898875778Rat
41392412LOC120102697small nucleolar RNA SNORA1748824063988240769Rat
41213638LOC120102652small nucleolar RNA SNORA484102675250102675393Rat
41394821LOC120102171uncharacterized LOC1201021714126995970126999766Rat
41156543LOC120102345uncharacterized LOC1201023454126097347126157088Rat
41156854Snord94small nucleolar RNA, C/D box 944103924328103924464Rat
41180823LOC120102592U6 spliceosomal RNA49916978599169889Rat
41193354LOC120102493uncharacterized LOC12010249349329282193299590Rat
41215295LOC120102732small nucleolar RNA SNORA1749715488097155000Rat
41288887LOC120102344uncharacterized LOC1201023444125657909125684813Rat
41125163LOC120102717small nucleolar RNA SNORA1749849391198494037Rat
41195085LOC120102492uncharacterized LOC12010249249081616490869483Rat
41269840Nudt1-ps1nudix hydrolase 1, pseudogene 149438167994382041Rat
41398122LOC12010254260S ribosomal protein L21-like4102797216102797569Rat
41070385Snora44small nucleolar RNA, H/ACA box 444126415989126416119Rat
41103026Atp5mg-ps11ATP synthase membrane subunit g, pseudogene 114108818020108821027Rat
41127828LOC120102339uncharacterized LOC1201023394121701048121712111Rat
41159196LOC120102709small nucleolar RNA SNORA174111773083111773205Rat
41195793LOC120102315uncharacterized LOC1201023154113504541113533897Rat
41196388LOC120102291uncharacterized LOC12010229149641626996417217Rat
41270105LOC120102319uncharacterized LOC1201023194115515273115521277Rat
41270403Igkvl-ps4immunoglobulin kappa variable like, pseudogene 449936335399363814Rat
41291582Npm1-ps6nucleophosmin 1, pseudogene 64108791940108792947Rat
41291607LOC120102330uncharacterized LOC1201023304120086931120112957Rat
41373605LOC120102663small nucleolar RNA SNORA174106494538106494669Rat
41104383LOC120102494uncharacterized LOC12010249449389284393911169Rat
41129602LOC120102669small nucleolar RNA SNORA174117587214117587345Rat
41161074LOC120102320uncharacterized LOC1201023204116014672116016904Rat
41161138LOC120102336uncharacterized LOC1201023364121277566121278416Rat
41229891LOC120102544uncharacterized LOC1201025444108434706108534978Rat
41349825Rpl23-ps8ribosomal protein L23,pseudogene 84115616374115621512Rat
41349965Igkvl-ps9immunoglobulin kappa variable like, pseudogene 94101040345101043988Rat
41350806Czib-ps2CXXC motif containing zinc binding protein, pseudogene 24117631660117632934Rat
41374913LOC120102638small nucleolar RNA SNORA2/SNORA34 family4119234751119234887Rat
41401399Spcs2-ps2signal peptidase complex subunit 2, pseudogene 24102869047102869887Rat
41081553LOC120102498uncharacterized LOC1201024984126742553126760176Rat
41162732LOC120102317uncharacterized LOC1201023174115217376115228513Rat
41162866Trnat-agu30transfer RNA threonine (anticodon AGU) 304126353506126353587Rat
41199103Trnav-aac19transfer RNA valine (anticodon AAC) 194121218174121218246Rat
41376499LOC120102333uncharacterized LOC1201023334120648227120658210Rat
41402798LOC120102332uncharacterized LOC1201023324120567736120572576Rat
41081979LOC120102712U1 spliceosomal RNA49614656196146710Rat
41083750LOC120102310uncharacterized LOC1201023104104988896104994531Rat
41107864LOC120102589U6 spliceosomal RNA49929007299290176Rat
41107960LOC120102702small nucleolar RNA SNORA1749700031297000443Rat
41132129Gabarap-ps3GABA type A receptor-associated protein, pseudogene 34126518341126548868Rat
41200685LOC120102325uncharacterized LOC1201023254118176974118190926Rat
41377972LOC120102346uncharacterized LOC1201023464126183463126186067Rat
41108878Igkvl-ps14immunoglobulin kappa variable like, pseudogene 1449928277299285103Rat
41109258Trnap-agg74transfer RNA proline (anticodon AGG) 744104598962104599042Rat
41233693LOC120102633small nucleolar RNA SNORA54116471399116471527Rat
40946187Igkvl-ps3immunoglobulin kappa variable like, pseudogene 349934046699340968Rat
40972357LOC120102677small nucleolar RNA SNORA174114390354114390483Rat
41011708LOC120102630small nucleolar RNA SNORA36 family4129770615129770745Rat
40949626LOC120102500uncharacterized LOC1201025004129086996129146558Rat
40974521LOC120102579U6 spliceosomal RNA49925367099253774Rat
41340927LOC120102746small nucleolar RNA U134117499018117499122Rat
40952747Trnas-aga32transfer RNA serine (anticodon AGA) 324103396425103396498Rat
40952956Arpc5l-ps4actin related protein 2/3 complex, subunit 5-like, pseudogene 449942323999424376Rat
40926323LOC120102600U6 spliceosomal RNA49362423893624344Rat
40953411LOC120102343uncharacterized LOC1201023434125386934125418673Rat
40977765LOC120102731small nucleolar RNA SNORA1749748051797480618Rat
40955934LOC120102329uncharacterized LOC1201023294119717819119729211Rat
40929032LOC120102616U7 small nuclear RNA49406112494061185Rat
40930702LOC120102497uncharacterized LOC1201024974126723866126732961Rat
40933947LOC120102313uncharacterized LOC1201023134108573617108627858Rat
41004547LOC120102499uncharacterized LOC1201024994129197518129420528Rat
40934091Trnaa-agctransfer RNA alanine (anticodon AGC)4103258388103258469Rat
40961802LOC120102590U6 spliceosomal RNA49934623299346336Rat
40936449LOC120102716small nucleolar RNA SNORA1749757666097576791Rat
41008980LOC120102656small nucleolar RNA SNORA484102572182102572325Rat
41009709LOC120102711small nucleolar RNA SNORA174117685079117685209Rat
40991721LOC120102726small nucleolar RNA SNORA1749499311894993219Rat
40942068LOC120102704small nucleolar RNA SNORA1749722965597229787Rat
40993191LOC120102703small nucleolar RNA SNORA174126026597126026707Rat
40994091Paics-ps3phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase, pseudogene 349164710291648078Rat
41075263Igkvl-ps6immunoglobulin kappa variable like, pseudogene 649901452399015161Rat
41048538LOC120102701U1 spliceosomal RNA4108539249108539412Rat
41049106Igkvl-ps15immunoglobulin kappa variable like, pseudogene 1549932280799323306Rat
41312835LOC120102520uncharacterized LOC12010252048894704088947688Rat
41025378LOC120102338uncharacterized LOC1201023384121690045121700753Rat
41316092LOC120102682small nucleolar RNA SNORA1749685191196852043Rat
41080233Gapdh-ps70Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 704116161930116162927Rat
41247803LOC120102720small nucleolar RNA SNORA174108118729108118852Rat
41318857LOC120102342uncharacterized LOC1201023424124637670124656902Rat
41136119LOC120102301uncharacterized LOC1201023014100744447100787990Rat
41255876LOC120102647small nucleolar RNA SNORA4849414489094145033Rat
41152181LOC120102169uncharacterized LOC1201021694104098343104105838Rat
41152310LOC120102555U4 spliceosomal RNA4116423166116423314Rat
41257949LOC120102328uncharacterized LOC1201023284119415816119417839Rat
41335347Rnu6-131RNA, U6 small nuclear 1314129166306129166407Rat
41031424LOC120102347uncharacterized LOC1201023474128336735128342363Rat
41221465LOC120102615U7 small nuclear RNA49406097694061038Rat
41258840LOC120102567U6 spliceosomal RNA48784604487846150Rat
41317950LOC120102724small nucleolar RNA SNORA174130392379130392510Rat
41059287LOC120102620U7 small nuclear RNA49171696791717031Rat
41033320LOC120102595U6 spliceosomal RNA49930944099309544Rat
41059548LOC120102691small nucleolar RNA SNORA1749698993796990067Rat
41337280LOC120102727small nucleolar RNA SNORA1749688594096886060Rat
41035699LOC120102323uncharacterized LOC1201023234117614716117648792Rat
41062867LOC120102308uncharacterized LOC1201023084104292221104321842Rat
41227538LOC120102655small nucleolar RNA SNORA484121944388121944517Rat
41016841LOC120102668U1 spliceosomal RNA4111394809111394970Rat
41236250LOC120102679U1 spliceosomal RNA4103011258103011413Rat
41018082LOC120102321uncharacterized LOC1201023214116080648116105711Rat
41018384Psmb3-ps2proteasome 20S subunit beta 3, pseudogene 24127536885127537501Rat
41305950LOC120102564U6 spliceosomal RNA4101286236101286342Rat
41306468LOC120102496uncharacterized LOC1201024964126790194126802525Rat
41044388LOC120102751U2 spliceosomal RNA49015113790151328Rat
41045910LOC120102715small nucleolar RNA SNORA1749796989597970021Rat
41309288Rpl21-ps9ribosomal protein L21, pseudogene 94120819893120820436Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10156D4Mit181854131730729131730924Ratregion
10157D4Wox171574131730755131730914Ratregion
10158D4Arb162514131730738131730991Ratregion
10513D4Arb63064118050728118051034Ratregion
10525D4Mit311244108086268108086390Ratregion
10560D4Mit121794103194805103194984Ratregion
10561D4Wox201444103194798103194942Ratregion
10562D4Arb212804103194656103194936Ratregion
10782D4Mit81034102684777102684881Ratregion
11229D4Wox281374110891355110891492Ratregion
33905D4Mit1129549136052791360801Ratregion
33933D4Mit161144128289450128289560Ratregion
33991D4Mit282204110275411110275633Ratregion
34023D4Mit291364117809401117809515Ratregion
34256D4Mgh181244126395976126396065Ratregion
11381D4Mgh171374114921280114921417Ratregion
11383D4Mit231204114921294114921414Ratregion
11409D4Wox181134118699850118699963Ratregion
11410D4Arb52474118699819118700066Ratregion
33696D4Mit151874113634394113634625Ratregion
36029D4Rat511704120093877120094047Ratregion
36043D4Rat491524117764993117765145Ratregion
36109D4Rat431474115861544115861680Ratregion
36175D4Rat531924124380585124380778Ratregion
36368D4Mit324116200971116201124Ratregion
37214D4Rat1052284126278101126278340Ratregion
35262D4Rat791584129854502129854654Ratregion
35278D4Rat462994120926564120926865Ratregion
35286D4Rat3715149330831593308457Ratregion
35310D4Rat451644119925288119925452Ratregion
35325D4Rat4117449613012396130297Ratregion
36898D4Rat801244130142051130142186Ratregion
36978D4Rat3813949585319395853334Ratregion
37062D4Rat421424114567908114568047Ratregion
37100D4Rat522344125920192125920418Ratregion
37868D4Rat1241464115948290115948441Ratregion
36508D4Rat482134123143783123143996Ratregion
36544D4Rat7716549512805695128221Ratregion
36725D4Rat781604116553490116553633Ratregion
34902D4Rat551754126192368126192555Ratregion
35003D4Rat501364118313054118313190Ratregion
35635D4Rat541714120102454120102625Ratregion
35669D4Rat3516449136661091366774Ratregion
35673D4Rat391544102981170102981329Ratregion
39634D4Rat1852364125064558125064778Ratregion
39768D4Rat1831384123717924123718054Ratregion
39916D4Rat1752114105220727105220938Ratregion
39930D4Rat1881334127252528127252665Ratregion
38074D4Rat1212324131435943131436173Ratregion
38344D4Rat1061544116179486116179656Ratregion
38360D4Rat1201864116786396116786582Ratregion
40586D4Rat23122648865668188656903Ratregion
40636D4Rat1802464115797041115797291Ratregion
40640D4Rat17124848821695788217207Ratregion
38412D4Rat882394130018906130019145Ratregion
38458D4Rat951204129149351129149473Ratregion
38682D4Rat972234109588035109588254Ratregion
38748D4Rat1092014115401426115401611Ratregion
39990D4Rat1772014112478605112478794Ratregion
40014D4Rat2332244107032553107032773Ratregion
40020D4Rat17316049248951492489678Ratregion
38866D4Rat872094127056296127056497Ratregion
38998D4Rat922224129998172129998394Ratregion
39158D4Rat11414120699429120699558Ratregion
39162D4Rat1162344130492986130493224Ratregion
39528D4Rat1762044114627026114627242Ratregion
42152D4Arb223184124264787124265103Ratregion
42308D4Rat2901344117123710117123846Ratregion
42712D4Rat2342414123802452123802675Ratregion
42716D4Rat2732384131508575131508837Ratregion
41232D4Rat1821414120260281120260420Ratregion
41456D4Rat1791554116601436116601590Ratregion
41502D4Rat1871464123826662123826812Ratregion
42707D4Rat23023448753215187532391Ratregion
42708D4Rat2322004103760884103761084Ratregion
42709D4Rat2672304105530657105530888Ratregion
42710D4Rat2682434114604799114605036Ratregion
42711D4Rat2692294121132485121132697Ratregion
40856D4Rat17414249422276294222908Ratregion
40878D4Rat1841034118928273118928386Ratregion
40974D4Rat1862014125121436125121651Ratregion
41586D4Rat17213349466112194661248Ratregion
41594D4Rat1902564129812526129812798Ratregion
41796D4Rat2361364127263958127264101Ratregion
43820D4Got7527349261823292618505Ratregion
43823D4Got881344116899150116899282Ratregion
43825D4Got1491444116809187116809331Ratregion
43826D4Got851294119615498119615629Ratregion
43827D4Got841504120000469120000619Ratregion
43829D4Got832314121139726121139954Ratregion
43830D4Got1481564120926546120926704Ratregion
43831D4Got821174123154343123154460Ratregion
43832D4Got931604126848713126848873Ratregion
43833D4Wox21474127437973127438130Ratregion
43834D4Got982884131073658131073946Ratregion
43835D4Got941474129193486129193635Ratregion
43836D4Got95994129302326129302425Ratregion
43837D4Got150884129667204129667292Ratregion
44796D10Got1171704110341308110341478Ratregion
60803D4Wox432549144941691449741Ratregion
60451D4Got6919348725177587251968Ratregion
60452D4Got7028849319926293199550Ratregion
60454D4Got7227549078304890783319Ratregion
60455D4Got7320549401004894010253Ratregion
60456D4Got7416349299129992991462Ratregion
60457D4Got7615548756588187566036Ratregion
60458D4Got7727849336204893362326Ratregion
60459D4Got7810849654062496540729Ratregion
60460D4Got7913149787685597876986Ratregion
60460D4Got7913149787685597876986Ratregion
60461D4Got8016549512799195128156Ratregion
60462D4Got8117749472249694722672Ratregion
60463D4Got861884119620464119620654Ratregion
60464D4Got872424117107756117107998Ratregion
60466D4Got902904118664949118665239Ratregion
60467D4Got912404118509866118510108Ratregion
60468D4Got921524117056959117057111Ratregion
60469D4Got961944129960443129960637Ratregion
625812D4Got1611854117010196117010381Ratregion
62477D4Uia11784119777225119777404Ratregion
62485D4Uia32534105163260105163513Ratregion
62509D4Uia732548828201988282339Ratregion
62514D4Uia828749643386196434152Ratregion
62517D4Uia91704124915758124915928Ratregion
66675D4Mco5904104582988104583088Ratregion
67358D4Arb393004114921179114921479Ratregion
1630882D4Got2741904119277682119277872Ratregion
1630987D4Got2561844117022038117022224Ratregion
1631098D4Got21314349321653693216679Ratregion
1631230D4Got2292554124746726124746984Ratregion
1627849D4Got2201374108940344108940481Ratregion
1628291D4Got2251264113262180113262306Ratregion
1628291D4Got2251264113262180113262461Ratregion
1628377D4Got2151314100834579100834710Ratregion
1628562D4Wox514115411954115412067Ratregion
1628562D4Wox514115411954115412094Ratregion
1628639D4Got2671624121063505121063667Ratregion
1628786D4Got2531494120656434120656583Ratregion
1628883D4Got29021849166258191662799Ratregion
1629067D4Got2732004105320244105320446Ratregion
1629971D4Got270984104066468104066566Ratregion
1639005D4Wox451754116045332116045507Ratregion
1639275D4Got2191734112814253112814426Ratregion
1640808D4Got3002004104650470104650670Ratregion
1640808D4Got3002004104650470104650789Ratregion
1641036D4Got3141714105154820105154991Ratregion
1641089D4Wox562944124194958124195252Ratregion
1641189D4Got3131214115512726115512847Ratregion
1641271D4Got2281914119910995119911182Ratregion
1641661D4Uia132234120633208120633431Ratregion
1641721D4Got31212949618367396183803Ratregion
1633140D4Got2712294114722694114722923Ratregion
1633465D4Wox343104115233125115233435Ratregion
1633603D4Got2981304123069574123069704Ratregion
1639783D4Got30922149862880598629022Ratregion
1640465D4Got3041914105406723105406914Ratregion
1640717D3Got2381594105423350105423389Ratregion
1635065D4Got2801494108087467108087616Ratregion
1635202D4Got2682174113463369113463586Ratregion
1635287D4Got2472934101095876101096164Ratregion
1635906D4Cebr42114118686099118686310Ratregion
1635939D4Got2182704109443598109443868Ratregion
1636116D4Got2262244115105443115105667Ratregion
1636210D4Got2633364113754489113754825Ratregion
1636730D4Ulb21974111948800111948999Ratregion
1636836D4Got2611434117134643117134786Ratregion
1637210D4Got2642194105855955105856174Ratregion
1637318D4Got2142064107879866107880072Ratregion
1638126D17Got2074113991044113991127Ratregion
1638278D4Got2932244115057756115057980Ratregion
1632485D4Got2272104115341758115341970Ratregion
7206398ABA00404118696898118697652Ratregion
7206398ABA00404118696913118697652Ratregion
7205888px-35f113548912259089122725Ratregion
7206492UniSTS:546664158149391229393913874Ratregion
5038648AU024348914103378720103378811Ratregion
5038650AU0148191374121978002121978139Ratregion
5038652BE1364731144122894589122894703Ratregion
5038654AW7433154414125314007125314448Ratregion
5038656AU0176271314125601011125601142Ratregion
5038658BB4681911014126445402126445503Ratregion
7206528UniSTS:54686910354115623776115624811Ratregion
7206596Emx14164117741139117741555Ratregion
7206666Mcm210824121346695121347777Ratregion
7206678Zxdc7074122894017122894724Ratregion
5039316RH1276361954102688085102688280Ratregion
5036412Mitf1404130538293130538433Ratregion
5036472Rab7-ps123149647428596474514Ratregion
5036472Rab7-ps12314120462698120462929Ratregion
5036488Sema4f3144115435123115435437Ratregion
5036508Spr2774117675455117675732Ratregion
5036523Nr2c21824124661479124661661Ratregion
5039144RH1275372194116253686116253905Ratregion
5036611AU0485921994114153294114153491Ratregion
5036639AU0486801524130262374130262526Ratregion
5037075RH451512364116474740116474976Ratregion
5037081A006T051604118973230118973390Ratregion
5037133WI-197372574115562967115563326Ratregion
5033921RH1406232204124687474124687694Ratregion
5033935RH1406751874118882552118882739Ratregion
5026088RH13086618149642154496421725Ratregion
5028627RH1241401584115555823115556054Ratregion
5028663RH1259162534120973527120973780Ratregion
5031376PMC153617P199448969698589697976Ratregion
5031402PMC15869P12844120305089120305373Ratregion
5034057RH1411981864104423930104424116Ratregion
5034069RH1412421824104666144104666326Ratregion
5026144RH1310812204102445899102446119Ratregion
5034197RH1417362004126205783126205983Ratregion
5034201RH1417502154120653422120653637Ratregion
5034225RH1418392084116009885116010093Ratregion
5034247RH1419211804104668969104669149Ratregion
5029037RH1432741584120955412120956762Ratregion
5031706AU04742120848765572087655928Ratregion
5031772AU0471952844118623940118624221Ratregion
5026588RH1327881834129761666129761849Ratregion
5034586BF41650114849282631592826463Ratregion
5026640RH1329802064116129202116129908Ratregion
5026702RH1332071924104474837104475029Ratregion
5026750RH1333891814104115084104115265Ratregion
5032139RH945161704118698966118699136Ratregion
5034690BG3744871014126212454126212555Ratregion
5029419Snca13048977854189778671Ratregion
5035062SHGC-773071344120302961120303095Ratregion
5035114D6UmiJ2304115411938115412066Ratregion
5035114D6UmiJ2304115411938115412093Ratregion
5032373AI4618941504104408038104408188Ratregion
5029775BI27811721049885200998852219Ratregion
5029813BI2784421154121117284121117399Ratregion
5029855BG3779461404118363486118363626Ratregion
5032615RH13465919249615496696155158Ratregion
5032625RH1346972154115987780115988799Ratregion
5027315AW146237804103542382103542462Ratregion
5027317AI3235871184116415730116415848Ratregion
5029903BE0976591534104495693104495846Ratregion
5030045AW5311821734124221697124221870Ratregion
5032767RH1352252074115958822115959029Ratregion
5035198BE1024411694122914747122914916Ratregion
5035256BM38445518349608032396080506Ratregion
5027513AI5287721464120706024120706170Ratregion
5032985RH1372061944125334321125334515Ratregion
5025016BB38566810249391401793914119Ratregion
5025018AW546958864120415138120415224Ratregion
5025020BE1993181074125290924125291033Ratregion
5027597AW5571231154115537631115537746Ratregion
5033297RH1383141234131596485131596608Ratregion
5033299RH1383221724103939969103940141Ratregion
5033351RH1385121294115026055115026184Ratregion
5025406RH1281921954123511544123511827Ratregion
5025406RH1281921954123511632123511827Ratregion
502793736.MMHAP88FLD6.seq1644124623000124623164Ratregion
5030667BE1075341604124423562124423722Ratregion
5033365RH1385681654124456030124456195Ratregion
5025500RH1285611874103866780103866967Ratregion
5025566RH1288141844119140704119140888Ratregion
5025580RH1288721624118996435118996597Ratregion
5030759BF4045991724129207415129207587Ratregion
5033523RH1391411604119590738119590898Ratregion
5033531RH1391702104114519777114519987Ratregion
5028269D6Mit1781024126752841126752943Ratregion
5028275D6Mit2472094116113915116114126Ratregion
5028281D7Mit2141154121009331121009446Ratregion
5033805RH1401871844121292996121293180Ratregion
5025822RH1298192144102723870102724084Ratregion
5025914RH1301842204110864764110864984Ratregion
5028456AI4285589848780216187802259Ratregion
5028458AI2669621014118359486118359587Ratregion
5028460C874361534118916494118916647Ratregion
5031121BF4065192364119447311119447547Ratregion
5031195RH1026111244131560789131560913Ratregion
5053445RH1426532154119761883119762098Ratregion
5053463RH1426631554121357599121357755Ratregion
5053647RH14276924548856376788564012Ratregion
5056073RH1441672364125681904125682140Ratregion
5053767RH1428391534117670422117670575Ratregion
5053901RH1429162664128335667128335933Ratregion
5056987UniSTS:23402926748969673889697005Ratregion
5054257RH1431201194112794567112794686Ratregion
5057462BF41870621848995016289950380Ratregion
5055391RH1437741714119533771119533942Ratregion
5054577RH1433041284118975027118975155Ratregion
5054637RH14333820049641905896419258Ratregion
5054705RH1433781644115811951115812115Ratregion
5057686BE1013431664104373048104373214Ratregion
5057828BF3862321634120220920120221083Ratregion
5055573RH1438791744117810827117811775Ratregion
5055599RH1438941784105352984105353162Ratregion
5058664BI2844191974123075227123075424Ratregion
5055907RH1440711404103131482103131622Ratregion
5055941RH1440912054127111887127112092Ratregion
5055187RH14365611048779599787796107Ratregion
5056193RH1442372714105742105105742376Ratregion
5058804BI2780441734126584909126585082Ratregion
5059698BE0976601584130453838130453996Ratregion
5056669RH14451110449214266292142766Ratregion
505216708.MMHAP84FRC8.seq1714122366340122366511Ratregion
5052456AI449063994119123800119123899Ratregion
5055251RH14369318448802469688024880Ratregion
5055561RH1438722414129896509129896750Ratregion
5055627RH1439101944119300181119300375Ratregion
5055717RH1439621144125021317125021431Ratregion
5052983RH1423862004103376147103376347Ratregion
5052349X593871414124742275124742416Ratregion
5058396AI0586821204127035618127035738Ratregion
5058482BI2904322094117683054117683263Ratregion
5059072BF3874131614125290721125290883Ratregion
5059116BI2784251674119078660119078827Ratregion
5059164AI1370802444125679610125679854Ratregion
5059206BF3876571624120337440120337598Ratregion
5050186RH1339112124124022682124022894Ratregion
5050290RH1339711894118366113118366302Ratregion
5053353RH14259910849080102690801134Ratregion
5053433RH1426461584129911850129912008Ratregion
5052721RH1422321904124744795124744985Ratregion
5054201RH1430882644118971306118971570Ratregion
5050460RH1340691804119184546119184726Ratregion
5053075RH1424391714104368194104368365Ratregion
5051409AW1072891184116055715116055833Ratregion
5050522RH1341051884104614724104614912Ratregion
5053389RH1426201054122896600122896705Ratregion
5041820RH1290771804105317070105317250Ratregion
5041902RH1291252074104421326104421533Ratregion
5043958RH13032819048841698488417174Ratregion
5040688RH1284262104121292996121294061Ratregion
5040944RH1285731944124684067124684261Ratregion
5044402RH1305821984118006281118006479Ratregion
5044512RH1306462104121375023121375233Ratregion
5044860RH1308452054103113095103113300Ratregion
5044886RH1308602064104373961104374167Ratregion
5040978RH12859319548743248787432682Ratregion
5041270RH1287601804123763541123763721Ratregion
5043682RH1301661844120187704120187888Ratregion
5045412RH1311631874115595302115595488Ratregion
5044036RH1303731904122876329122876519Ratregion
5045600RH1312701544119451645119451799Ratregion
5045772RH1313702144104192190104192412Ratregion
5046108RH1315631884103275625103275813Ratregion
5046178RH1316031934117479122117479315Ratregion
5048714RH13306320149431222094312787Ratregion
5044930RH1308852184109894954109895172Ratregion
5044934RH1308871824103623614103623796Ratregion
5045364RH1311351924119121893119122085Ratregion
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5046578RH1318341964127115939127116135Ratregion
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5045020RH1309372084118881497118881705Ratregion
5045198RH1310401924120070738120070930Ratregion
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5045618RH1312812124120320186120320396Ratregion
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5048014RH1326591854122843727122844961Ratregion
5048040RH13267421049642458396424793Ratregion
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5049396RH1334571874104562968104563155Ratregion
5049396RH1334571874104562968104563155Ratregion
5046982RH1320662144126313294126313508Ratregion
5048268RH1328051814120303038120303219Ratregion
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5039578RH1277862204124594140124594360Ratregion
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5042326RH1293701914103375882103376073Ratregion
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5040610RH1283822034115615859115616062Ratregion
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5040082RH1280791964124742158124742354Ratregion
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5041016RH1286151854123992421123992606Ratregion
5043642RH13014318248763662987636811Ratregion
5043794RH13023118048780254087802720Ratregion
5041536RH1289131864110894873110895059Ratregion
5072536RH1369061924119588827119589019Ratregion
5072560RH1369202014100738744100738936Ratregion
5072560RH1369202014100791061100791262Ratregion
5075054RH1383721374122112235122112372Ratregion
5075086RH1383901564124431552124431708Ratregion
5074052RH1377912194114514729114514948Ratregion
5072834RH1370811614120236932120237093Ratregion
5075518RH1386402484120288742120288990Ratregion
5075574RH1386721354118883086118883221Ratregion
5075748RH1387741294115537463115537592Ratregion
5075808RH1388091874124236686124236873Ratregion
5072254RH1367421244118219748118219872Ratregion
5072456RH1368601884124668370124668558Ratregion
5074232RH1378981584117591416117591570Ratregion
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5074280RH13792518848744186787442054Ratregion
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5074520RH1380641954118871491118871686Ratregion
5076690RH1393221404130489447130489587Ratregion
5076928RH13946018048802294688023126Ratregion
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5075026RH1383562214129985162129985383Ratregion
5080580RH1416622174119822989119824223Ratregion
5080600RH1416731804121014656121014836Ratregion
5077334RH1396961884115583602115583790Ratregion
5075088RH1383911634114518648114518811Ratregion
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5075800RH1388042334103917425103917658Ratregion
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5077954RH1400571924131561676131561868Ratregion
5077962RH1400622014121438939121439138Ratregion
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5077680RH1398961894118916370118916559Ratregion
5078462RH1403571214120667412120667533Ratregion
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5078764RH1405382124117674529117674738Ratregion
5078764RH1405382124117690507117690719Ratregion
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5080044RH1413511864104260011104260197Ratregion
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5079006RH1406792134104424094104425000Ratregion
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5087584PMC34520P13904104361112104361502Ratregion
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5087899Grid29649385576393855859Ratregion
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5087897Grid212849385566493855792Ratregion
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5090639AU0498732454113238004113238249Ratregion
5084030AI1753481684103862098103862266Ratregion
5081545AA9260991244117672101117672225Ratregion
5081545AA9260991244117672101117672225Ratregion
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5081545AA9260991244117693004117693128Ratregion
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5087741Cnbp1694120302771120302940Ratregion
5087811D6Wsu157e1614104373956104374117Ratregion
5082221BI2742591684119588997119589164Ratregion
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5085579BQ2111052034116684937116685140Ratregion
5090681AU0498971884122865191122865379Ratregion
5088345AU04851314749526102095261167Ratregion
5080874RH1418332064123107234123107440Ratregion
5090389AU0497222174102768533102768752Ratregion
5090425AU0497431764121153246121153424Ratregion
5090513AU0497962784110133169110133447Ratregion
5088723AU0487391164124045167124045283Ratregion
5088731AU0487461714131460368131460539Ratregion
5088759AU0487601944103030125103030315Ratregion
5088899AU0488362484120827695120827941Ratregion
5081100RH1419652134124628136124628349Ratregion
5081358AA9238812124104414640104414852Ratregion
5090135AU0495702914126909599126909890Ratregion
5090161AU0495872184103344415103344633Ratregion
5090215AU0496192734103635251103635521Ratregion
5089075AU0489401464119228457119228605Ratregion
5082595BE11981315649017649890176650Ratregion
5082673BE1199791604123653032123653192Ratregion
5081020RH1419182094119097380119097589Ratregion
5084476AA8504811514128067126128067277Ratregion
5084510AI40975519748804190288042100Ratregion
5082753BF3900211234117405991117406114Ratregion
5081222RH1420352204122901435122901655Ratregion
5081346UniSTS:2261511824117731352117731534Ratregion
5083083BI2751072004124665111124665311Ratregion
5083127BF39081515049375655593756705Ratregion
5083233BG3803312314126728933126729164Ratregion
5083980AI2323511174119141273119141390Ratregion
5503014Loxl313564115555575115556931Ratregion
5503107CCT71064118003931118004576Ratregion
5503146RAB7A784120467340120468086Ratregion
5503585UniSTS:4646631164117054705117054821Ratregion
5504224RH7556324848679577886796026Ratregion
5507690Igk-V157049770958597710155Ratregion
5504410PMC196074P22324104291604104291836Ratregion
5504260G4326910849641862496418732Ratregion
5504274D2S1554E2504118973700118973950Ratregion
5504408PMC196178P12484102697318102697566Ratregion
5504652PMC327172P12814120651590120651871Ratregion
5504867ha27071884106209232106209420Ratregion
5504969Tshr11249214266292142774Ratregion
5505229Aldh1l1684123078906123078974Ratregion
5505544D12S20449644121304226121305190Ratregion
5505822UniSTS:49555010484122168346122169394Ratregion
5505935UniSTS:49661912814130586060130587341Ratregion
5506242TXP2087544121529818121530572Ratregion
5506473AFM342xc104131050442131051010Ratregion
5506140UniSTS:498461704104606177104606247Ratregion
5506437UniSTS:4793056004116467421116468021Ratregion
5506445UniSTS:4803022074114921402114921609Ratregion
5507107UniSTS:2245851954120303411120303607Ratregion
5507175UniSTS:22501117848769912887699306Ratregion
5507057UniSTS:2242782054123543954123544159Ratregion
5499517stSG61060504111297395111297655Ratregion
5500581RH1360641464118872930118873076Ratregion
5499739UniSTS:2343962124100791207100791419Ratregion
5499909UniSTS:2354952114123171312123171523Ratregion
5499911UniSTS:2354961374123724546123724683Ratregion
5500021UniSTS:2362041104120319710120319820Ratregion
5499649MARC_6321-6322:992007238:1914115703010115703422Ratregion
5501640UNH10423114123870702123871013Ratregion
5499839UniSTS:2349592354116294332116294567Ratregion
5499915UniSTS:2354822074118005695118006215Ratregion
5501035PMC124275P24704120462854120463324Ratregion
5501594RH369058854124015064124015949Ratregion
5504704PMC58532P12444120665358120666068Ratregion
5501534RH468973694129422482129422851Ratregion
5501798MARC_12813-12814:999878148:11664116283157116283961Ratregion
5502030MARC_24177-24178:1033563974:16594103541402103542061Ratregion
5502134MARC_5405-5406:996690354:1634126179895126179958Ratregion
5502766RPIA1034102731716102732464Ratregion
5502243AI3156818124118226192118227004Ratregion
5502409RH1247491514120303077120303228Ratregion
5502471RH124966844115561661115561745Ratregion
11565149D4Nirs22244120254905120255132Ratregion
11565154D4Nirs82084120612774120612983Ratregion
Position Markers

Flank 1: (D4Arb30)
Rat AssemblyChrPosition (strand)Source
RGSC_v3.4473,972,454 - 73,972,591UniSTS
RGSC_v3.4473,972,453 - 73,972,591RGD
RGSC_v3.1474,248,583 - 74,248,721RGD
Celera469,789,851 - 69,789,980UniSTS
RH 3.4 Map4465.4RGD
RH 3.4 Map4465.4UniSTS
RH 2.0 Map4512.0RGD
SHRSP x BN Map437.38RGD
FHH x ACI Map445.77RGD
Cytogenetic Map4q24UniSTS
Peak: (D4Arb24)
Rat AssemblyChrPosition (strand)Source
Cytogenetic Map4 RGD
Flank 2: (D4Arb16)
Rat AssemblyChrPosition (strand)Source
mRatBN7.24131,730,738 - 131,730,991 (+)MAPPER
Rnor_6.04131,532,269 - 131,532,519NCBI
Rnor_5.04196,023,944 - 196,024,194UniSTS
RGSC_v3.44133,939,407 - 133,939,659RGD
RGSC_v3.44133,939,408 - 133,939,658UniSTS
Celera4120,589,305 - 120,589,547UniSTS
RH 3.4 Map4801.3UniSTS
RH 3.4 Map4801.3RGD
RH 2.0 Map4863.3RGD
SHRSP x BN Map458.74RGD
FHH x ACI Map475.85RGD
Cytogenetic Map4q34UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2303168Bp330Blood pressure QTL 3304.250.017arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)45214602146446691Rat
631261Tcas3Tongue tumor susceptibility QTL 36.88tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)41081417091360527Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)411320076180699135Rat
12798520Anxrr55Anxiety related response QTL 554.450.01locomotor behavior trait (VT:0001392)number of rearing movements with lid-pushing in an experimental apparatus (CMO:0002715)432583980114627242Rat
8655961Kidm43Kidney mass QTL 4318kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)436303261103194984Rat
1358352Srcrt3Stress Responsive Cort QTL 32.29blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)438465774146803430Rat
1300139Hrtrt6Heart rate QTL 62.85heart pumping trait (VT:2000009)heart rate (CMO:0000002)439524264116179656Rat
6893678Bw108Body weight QTL 1082.60.006body mass (VT:0001259)body weight (CMO:0000012)44345797688457976Rat
1576305Emca6Estrogen-induced mammary cancer QTL 65.8mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)444463720155883716Rat
1354612Foco1Food consumption QTL 18.87eating behavior trait (VT:0001431)food intake rate (CMO:0000427)444463908148090542Rat
1354660Salc1Saline consumption QTL 111.26drinking behavior trait (VT:0001422)saline drink intake rate (CMO:0001627)444463908148090542Rat
2312567Glom19Glomerulus QTL 191.90.006kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)445456990146803430Rat
1298082Stresp4Stress response QTL 4blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)450119848146803430Rat
70200Alc18Alcohol consumption QTL 189.2drinking behavior trait (VT:0001422)ethanol intake volume to total fluid intake volume ratio (CMO:0001591)456647873149491524Rat
1641833Alc21Alcohol consumption QTL 218.60.0001drinking behavior trait (VT:0001422)ethanol drink intake rate (CMO:0001407)456698790126192555Rat
631546Bp86Blood pressure QTL 863.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)45711443291360801Rat
1358363Sradr3Stress Responsive Adrenal Weight QTL 36.19adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)457486946102486946Rat
1558651Swd3Spike wave discharge measurement QTL 34.620.000024brain electrophysiology trait (VT:0010557)brain spike-and-wave discharge frequency (CMO:0001742)45843213392991462Rat
738009Sach4Saccharine consumption QTL 44.90.000016consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)459948935154902892Rat
738016Alc16Alcohol consumption QTL 163.60.00015consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)459948935154902892Rat
738031Alc14Alcohol consumption QTL 147.60.00003consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)459948935154902892Rat
1578657Bss12Bone structure and strength QTL 128.9femur morphology trait (VT:0000559)femoral neck cross-sectional area (CMO:0001697)460220938105220938Rat
1578658Bss13Bone structure and strength QTL 138femur strength trait (VT:0010010)femoral neck polar moment of inertia (CMO:0001670)460220938105220938Rat
2300179Bmd50Bone mineral density QTL 505.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)460928534105928534Rat
1549843Bw53Body weight QTL 530.0001body mass (VT:0001259)body weight gain (CMO:0000420)461697658103194791Rat
1549839Bw52Body weight QTL 520.0001body mass (VT:0001259)body weight gain (CMO:0000420)461697658115089733Rat
61418Pia5Pristane induced arthritis QTL 54.5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)462277855128289560Rat
6478743Anxrr40Anxiety related response QTL 400.83076defecation behavior trait (VT:0010462)defecation rate (CMO:0000998)462753847107753847Rat
6478772Anxrr49Anxiety related response QTL 490.15488defecation behavior trait (VT:0010462)defecation rate (CMO:0000998)462753847107753847Rat
6478684Anxrr30Anxiety related response QTL 300.00087defecation behavior trait (VT:0010462)defecation rate (CMO:0000998)462753847107753847Rat
631651Bp124Blood pressure QTL 1243arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)462879517107879517Rat
7394826Bw126Body weight QTL 1260.002body mass (VT:0001259)body weight gain (CMO:0000420)46293326987483707Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)percent change in mean arterial blood pressure (CMO:0002035)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)percent change in systolic blood pressure (CMO:0000747)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)absolute change in pulse pressure (CMO:0001882)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)462933508114921294Rat
631674Iddm14Insulin dependent diabetes mellitus QTL 14blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)464528739157573521Rat
2312569Pur19Proteinuria QTL 193.40.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)46588210796130297Rat
61330Eau1Experimental allergic uveoretinitis QTL 10.0003uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)470362013132642728Rat
634344Hcar7Hepatocarcinoma resistance QTL 77.8liver integrity trait (VT:0010547)liver tumorous lesion area to total liver area ratio (CMO:0001075)470808386115808386Rat
634344Hcar7Hepatocarcinoma resistance QTL 77.8liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)470808386115808386Rat
631646Stl4Serum triglyceride level QTL 46.50.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)473169846132642728Rat
724522Bp146Blood pressure QTL 1462.20.0021arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)473630210118630210Rat
2302051Pia28Pristane induced arthritis QTL 285.30.001blood autoantibody amount (VT:0003725)serum immunoglobulin G-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002112)473630210118630210Rat
70167Bw22Body weight QTL 223.1body mass (VT:0001259)body weight (CMO:0000012)476647384117676292Rat
1357342Bw40Body weight QTL 400.001body mass (VT:0001259)body weight (CMO:0000012)476647384117676292Rat
631662Hcar2Hepatocarcinoma resistance QTL 23.10.0003liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)478878504123878504Rat
631556Bp135Blood pressure QTL 1350.017arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)478881294117676292Rat
61364Iddm2Insulin dependent diabetes mellitus QTL 2blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)478885890102684881Rat
738015Pia9Pristane induced arthritis QTL 94.50.048joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)480694870125694870Rat
2306899Bp338Blood pressure QTL 3380.071arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)481006124120102625Rat
1641919Alc22Alcohol consumption QTL 220.0005drinking behavior trait (VT:0001422)ethanol drink intake rate (CMO:0001407)481192555126192555Rat
70177Xhs1X-ray hypersensitivity QTL 125.1intestine integrity trait (VT:0010554)post-insult time to onset of moribundity (CMO:0001896)482798864152731274Rat
2306794Ean2Experimental allergic neuritis QTL 26.4nervous system integrity trait (VT:0010566)IFNG-secreting splenocyte count (CMO:0002122)48342841995853334Rat
1576316Ept5Estrogen-induced pituitary tumorigenesis QTL 53.8pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)483428419177635233Rat
634334Xhs3X-ray hypersensitivity QTL 310intestine integrity trait (VT:0010554)post-insult time to onset of moribundity (CMO:0001896)484728680129854654Rat
1582232Gluco25Glucose level QTL 253.60.0023blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)485253748148090731Rat
12798523Anxrr56Anxiety related response QTL 562.830.05locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)485253748150276390Rat
1358202Gluco11Glucose level QTL 112.40.02adipocyte glucose uptake trait (VT:0004185)absolute change in adipocyte glucose uptake (CMO:0000873)485379421167139601Rat
61476Aia3Adjuvant induced arthritis QTL 33.9joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)486730991131730991Rat
1578662Bss15Bone structure and strength QTL 1519.6femur width (VT:1000666)femoral neck width (CMO:0001695)487327165132327165Rat
1578670Bss14Bone structure and strength QTL 1416.4femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)487327165132327165Rat
2317587Eae26Experimental allergic encephalomyelitis QTL 26nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)488656681103194984Rat
1578655Bmd11Bone mineral density QTL 1111femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)490850165135850165Rat
634335Anxrr16Anxiety related response QTL 167.22locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)493308457167139447Rat
631689Scl4Serum cholesterol level QTL 41.90.008blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)495174120140174120Rat
8662350Eae35Experimental allergic encephalomyelitis QTL 356.2blood tumor necrosis factor amount (VT:0008552)inflammatory exudate tumor necrosis factor level (CMO:0001435)4100834579103761084Rat
61434Cia3Collagen induced arthritis QTL 34.8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4103194656148194656Rat
2317588Eae27Experimental allergic encephalomyelitis QTL 27nervous system integrity trait (VT:0010566)percentage of study population developing experimental autoimmune encephalomyelitis during a period of time (CMO:0001047)4103194805112478794Rat
2302049Pia32Pristane induced arthritis QTL 325.10.001blood autoantibody amount (VT:0003725)serum immunoglobulin G-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002112)4105789505150789505Rat
731165Uae21Urinary albumin excretion QTL 212.40.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)4106649412151649412Rat
61406Scwia1Streptococcal cell wall induced arthritis QTL 12.3joint integrity trait (VT:0010548)experimental arthritis severity measurement (CMO:0001459)4106805662151805662Rat
7207480Bss105Bone structure and strength QTL 1058.1femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)4109827074154827074Rat
1549832Bss3Bone structure and strength QTL 311femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)4109827074154827074Rat
737821Hcar9Hepatocarcinoma resistance QTL 93.7liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)4109866907167139601Rat
1331759Hrtrt13Heart rate QTL 133.54628heart pumping trait (VT:2000009)heart rate (CMO:0000002)4110275411168266883Rat
6478760Anxrr45Anxiety related response QTL 450.06717locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4110870972155870972Rat
6478763Anxrr46Anxiety related response QTL 460.07428locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4110870972155870972Rat
12798519Anxrr54Anxiety related response QTL 542.540.05locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4114627026159627026Rat
1300116Hrtrt5Heart rate QTL 53.76heart pumping trait (VT:2000009)heart rate (CMO:0000002)4116179486151161268Rat
724535Cm18Cardiac mass QTL 182.6heart mass (VT:0007028)calculated heart weight (CMO:0000073)4118856416163856416Rat
1331802Srn5Serum renin concentration QTL 53.045renin activity (VT:0005581)plasma renin activity level (CMO:0000116)4119428175157578333Rat
12798527Anxrr58Anxiety related response QTL 584.110.05locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4119463257147278687Rat
70201Gcr1Gastric cancer resistance QTL 12.7stomach morphology trait (VT:0000470)stomach tumor susceptibility score (CMO:0002043)4120260281147278687Rat
2293840Kiddil9Kidney dilation QTL 92.9kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)4120926564148090731Rat
634347Hcar8Hepatocarcinoma resistance QTL 85.8liver integrity trait (VT:0010547)liver tumorous lesion area to total liver area ratio (CMO:0001075)4123143783168143783Rat
631683Bp116Blood pressure QTL 1160.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)4124303370169303370Rat
6478778Anxrr51Anxiety related response QTL 510.25384locomotor behavior trait (VT:0001392)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)4124778595169778595Rat
7411558Bw133Body weight QTL 13313.840.001body mass (VT:0001259)body weight gain (CMO:0000420)4125590636170590636Rat
61451Ciaa4CIA Autoantibody QTL 43.1blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)4126395976167139601Rat
737978Pia23Pristane induced arthritis QTL 235.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4131730738167139601Rat
631511Pia7Pristane induced arthritis QTL 74.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4131730738167139601Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Aia3

RGD Curation Notes
Note Type Note Reference
qtl_gene Cia3, Aia3, and Pia5 are contained within chromosome 4 R2 subcongenic strain DA.PVG.1AV1-(D4Mgh17-D4Rat56) 629560
qtl_gene whole genome analysis using PGMapper revealed Aqp1 as RA associated 2300074
qtl_gene 408 known and 192 novel genes were found in an analysis based on PubMed and OMIM data 2307198