Bp16 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Bp16 (Blood pressure QTL 16) Rattus norvegicus

Symbol: Bp16
Name: Blood pressure QTL 16
RGD ID: 61469
Trait: arterial blood pressure trait   (VT:2000000)    
Measurement Type: blood pressure measurement   (CMO:0000003)    
LOD Score: 5.64
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.22169,745,596 - 214,745,596RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.02184,730,446 - 229,730,446RGD_MAPPER_PIPELINERnor6.0
Rnor_5.02204,149,709 - 249,149,709RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.42177,484,675 - 222,484,675RGD_MAPPER_PIPELINERGSC3.4
RGSC_v3.12177,447,430 - 222,447,430RGD
Cross Type: F2
Strains Crossed: SHR WKY 



Candidate Gene Status
Atp1a1 is a candidate Gene for Bp16

Disease Annotations     Click to see Annotation Detail View
hypertension  (IDA)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
SHR  (IEA)
WKY  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Chromosome 2 reciprocal congenic strains to evaluate the effect of the genetic background on blood pressure. Carr FJ, etal., Scott Med J 2002 Feb;47(1):7-9.
2. Detection and positional cloning of blood pressure quantitative trait loci: is it possible? Identifying the genes for genetic hypertension. Rapp JP and Deng AY, Hypertension 1995 Jun;25(6):1121-8.
3. Analysis of quantitative trait loci for blood pressure on rat chromosomes 2 and 13. Age-related differences in effect. Samani NJ, etal., Hypertension 1996 Dec;28(6):1118-22
4. A biometrical genome search in rats reveals the multigenic basis of blood pressure variation. Schork NJ, etal., Genome Res 1995 Sep;5(2):164-72
Related QTLs

Related QTL Description Reference
Bp19 interacts with RGD:61045
Bp10 maps to same region RGD:619639
Bp14 interacts with RGD:728179


Region

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
Position Markers

Peak: (D2Wox7)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22192,245,536 - 192,245,657 (+)MAPPER
Rnor_6.02207,230,387 - 207,230,505NCBI
Rnor_5.02226,649,650 - 226,649,768UniSTS
RGSC_v3.42199,984,617 - 199,984,735UniSTS
RGSC_v3.42199,984,616 - 199,984,735RGD
Celera2184,712,392 - 184,712,510UniSTS
RGSC_v3.12199,947,371 - 199,947,489RGD
RH 3.4 Map21346.5UniSTS
RH 3.4 Map21346.5RGD


Additional Information

Database Acc Id Source(s)
NCBI Gene Bp16

RGD Curation Notes
Note Type Note Reference