Bp13 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Bp13 (Blood pressure QTL 13) Rattus norvegicus

Symbol: Bp13
Name: Blood pressure QTL 13
RGD ID: 61465
Trait: blood pressure trait   (VT:0000183)    
Measurement Type: diastolic blood pressure   (CMO:0000005)    
LOD Score: 3.3
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8278,269,809 - 104,744,824RGD_MAPPER_PIPELINE
mRatBN7.2276,539,322 - 102,785,628RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0278,321,410 - 105,089,682RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0298,037,122 - 124,850,792RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4277,630,629 - 105,443,909RGDRGSC3.4
RGSC_v3.1277,561,812 - 105,388,871RGD
Cross Type: F2
Strains Crossed: SHRSP/Gcrc WKY/Gcrc 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
hypertension  (IDA)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
SHRSP/Gcrc  (IEA)
WKY/Gcrc  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Quantitative trait loci in genetically hypertensive rats. Possible sex specificity. Clark JS, etal., Hypertension 1996 Nov;28(5):898-906
2. Applicability of a "speed" congenic strategy to dissect blood pressure quantitative trait loci on rat chromosome 2. Jeffs B, etal., Hypertension 2000 Jan;35(1 Pt 2):179-87.
Related QTLs

Related QTL Description Reference
Bp6 maps to same region RGD:68910
Bp132 maps to same region RGD:68910


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1593219Rpl9-ps22ribosomal protein L9, pseudogene 2227660246676603113Rat
40928086LOC120101219U7 small nuclear RNA27664811376648175Rat
1559945Marchf11membrane associated ring-CH-type finger 1127689833076999690Rat
1305813Fbxl7F-box and leucine-rich repeat protein 727713977577509223Rat
41093744LOC120100752uncharacterized LOC12010075227726901677284684Rat
1595140Hsp90ab1-ps10heat shock protein 90 alpha family class B member 1, pseudogene 1027763955877641665Rat
41056389LOC120101320small nucleolar RNA SNORA1727767562177675749Rat
41137062Rnu2-24RNA, U2 small nuclear 2427770271777702836Rat
619925AnkhANKH inorganic pyrophosphate transport regulator27815302778280181Rat
41156512LOC120100754uncharacterized LOC12010075427817275178179652Rat
2324500OtulinOTU deubiquitinase with linear linkage specificity27829043778316633Rat
1563205OtulinlOTU deubiquitinase with linear linkage specificity like27840599478433860Rat
1308360Triotrio Rho guanine nucleotide exchange factor27850506978801384Rat
1595053Rpl19-ps11ribosomal protein L19, pseudogene 1127886883578869411Rat
1589269Krt18l1keratin 18 like 127891040078911742Rat
1560828Dnah5dynein, axonemal, heavy chain 527893778879255551Rat
11418901LOC10834997060S ribosomal protein L27 pseudogene27895282078953229Rat
41136923Tuba1c-ps4tubulin, alpha 1C, pseudogene 427923675079237720Rat
1593760Kat8-ps1lysine acetyltransferase 8, pseudogene 127948501279486383Rat
7603843LOC102551226uncharacterized LOC10255122627963411579641114Rat
7740519LOC102551357uncharacterized LOC10255135727988846379939230Rat
2322903Actr3-ps1actin related protein 3, pseudogene 128008312880084348Rat
1592059Rps10-ps2ribosomal protein S10, pseudogene 228017473480175231Rat
41303141Rps19-ps9ribosomal protein S19, pseudogene 928024233180242836Rat
7530586LOC102551810uncharacterized LOC10255181028080543880830606Rat
41250438LOC120101317small nucleolar RNA SNORA1728089744680897577Rat
41016308LOC120101176U6 spliceosomal RNA28090851180908615Rat
41216266LOC120101293small nucleolar RNA SNORA1728098539980985530Rat
620734Ctnnd2catenin delta 228116852582016495Rat
7595026LOC102553378uncharacterized LOC10255337828154639981547681Rat
41208025LOC120101223U7 small nuclear RNA28159992081599980Rat
7671897LOC102553574uncharacterized LOC10255357428214070782173924Rat
41201453Rnu1-80RNA, U1 small nuclear 8028214836482148523Rat
41324632LOC120101300small nucleolar RNA SNORA1728217729582177424Rat
620641Dapdeath-associated protein28219920682251771Rat
41316876LOC120100757uncharacterized LOC12010075728223303882239128Rat
1564227Ankrd33bankyrin repeat domain 33B28227760482359420Rat
1591367Ropn1lrhophilin associated tail protein 1-like28244264582453332Rat
7678070LOC102553736uncharacterized LOC10255373628245355282454675Rat
1565757Marchf6membrane associated ring-CH-type finger 628245568682532917Rat
40962896Snora24small nucleolar RNA, H/ACA box 2428249077082490892Rat
1306952Cmblcarboxymethylenebutenolidase homolog28256925782591007Rat
735161Cct5chaperonin containing TCP1 subunit 528259175082602903Rat
1560629AtpsckmtATP synthase c subunit lysine N-methyltransferase28260308682618325Rat
2322522Wdr75-ps1WD repeat domain 75, pseudogene 128274957982751757Rat
41204457LOC120101303small nucleolar RNA SNORA1728279041782790548Rat
41145215LOC120101135U6 spliceosomal RNA28294449282944598Rat
620733Tas2r119taste receptor, type 2, member 11928323759583238602Rat
2323921Sdhaf4-ps1succinate dehydrogenase complex assembly factor 4, pseudogene 128324721183247542Rat
6502911LOC100909539uncharacterized LOC10090953928330666783309688Rat
41356687Snord123small nucleolar RNA, C/D box 12328330691883306987Rat
1308650Sema5asemaphorin 5A28330984383741084Rat
41068304LOC120101139U6 spliceosomal RNA28378219383782299Rat
41354863Zfp748-ps2zinc finger protein 748, pseudogene 228386111783866826Rat
1585655Hmgn4-ps8high mobility group nucleosomal binding domain 4, pseudogene 828407570184075971Rat
11447466Zfp712zinc finger protein 71228443107084479170Rat
6502425Zfp708zinc finger protein 70828447343684525070Rat
41209199Phaf1l-ps1phagosome assembly factor 1 like, pseudogene 128449504384497655Rat
40948588LOC120100761zinc finger protein 728-like28456268584618998Rat
2322273Zfp457zinc finger protein 45728462536084642535Rat
11457724LOC108349973zinc finger protein 728-like28466113584684994Rat
1559684Zfp458zinc finger protein 45828466115084705631Rat
628788Zfp455zinc finger protein 45528471243184733542Rat
1587849Rsl1regulator of sex limited protein 128473969484763617Rat
7564391Znf431l13zinc finger protein 431 like 1328478246384812216Rat
9153014D130040H23RiklRIKEN cDNA D130040H23 gene like28486716084869455Rat
6500592LOC100909964tyrosine-protein phosphatase non-receptor type substrate 1-like28501110285049473Rat
1309745Sirpb2signal-regulatory protein beta 228524867985278871Rat
2321536Sirpal1signal-regulatory protein alpha like 128551348485702291Rat
2321484Sirpa-ps1signal-regulatory protein alpha, pseudogene 128570705185849969Rat
7621135LOC102546663tyrosine-protein phosphatase non-receptor type substrate 1-like28602086986029938Rat
1587814Sirpb2l1signal-regulatory protein beta 2-like 128626781686280536Rat
1587796Tle4-ps1TLE family member 4, transcriptional corepressor, pseudogene 128631352786328412Rat
41252796Ap2s1-ps2adaptor related protein complex 2 subunit sigma 1, pseudogene 228633722386341061Rat
1586670Eif5a-ps2eukaryotic translation initiation factor 5A-pseudogene 228659869986599761Rat
2240Car2carbonic anhydrase 228674162586756766Rat
2241Car3carbonic anhydrase 328677041886780011Rat
1309780Car1carbonic anhydrase 128682943686872209Rat
1560453Car13carbonic anhydrase 1328692840186959525Rat
2320742Prxl2a-ps1peroxiredoxin like 2A, pseudogene 128695946986967653Rat
1565641Rbisribosomal biogenesis factor28698131486997352Rat
621357E2f5E2F transcription factor 528699733187012908Rat
628722Lrrcc1leucine rich repeat and coiled-coil centrosomal protein 128702567187060313Rat
1309208Slc7a12solute carrier family 7 (cationic amino acid transporter, y+ system), member 1228707972487146875Rat
40938153Slc7a13-ps1solute carrier family 7 member 13, pseudogene 128717656287177648Rat
41270292Slc7a13-ps2solute carrier family 7 member 13, pseudogene 228719242887193182Rat
1589989Slc7a12l1solute carrier family 7 (cationic amino acid transporter, y+ system), member 12 like 128721153487230685Rat
1305844RalylRALY RNA binding protein-like28748274788274329Rat
11380439LOC108349976eukaryotic translation initiation factor 1 pseudogene28778725287788140Rat
1588876Aldoa-ps5aldolase, fructose-bisphosphate A, pseudogene 528840179088402960Rat
6496250Tgap1l1GTPase activating protein testicular GAP1 like 128881243488947739Rat
2324778Txnl4al1thioredoxin-like 4A like 128893522189339701Rat
1593216Naa11-ps9N(alpha)-acetyltransferase 11, NatA catalytic subunit, pseudogene 928893544288937194Rat
9304207LOC103691505uncharacterized LOC10369150528897087588980334Rat
41266464LOC120101217U7 small nuclear RNA28934485789344915Rat
1588803Hspa8-ps32heat shock protein family A (Hsp70) member 8, pseudogene 3228939201989413186Rat
1588790Spic-ps1Spi-C transcription factor, pseudogene 128947153489495857Rat
41171310Trnaa-agc90transfer RNA alanine (anticodon AGC) 9029024024290240315Rat
1359558Tgap1GTPase activating protein testicular GAP129036277290436415Rat
1334307Or10ag62-ps1olfactory receptor family 10 subfamily AG member 62, pseudogene 129068544990686491Rat
2319570Eif1ax-ps1eukaryotic translation initiation factor 1A, X-linked, pseudogene 129074415190745318Rat
41099516LOC120101304small nucleolar RNA SNORA1729078950990789640Rat
2319479Vbp1l-ps1VHL binding protein 1 like, pseudogene 129098769290988247Rat
7561027LOC102553210uncharacterized LOC10255321029114641291174526Rat
9349712LOC103691511uncharacterized LOC10369151129127719591310476Rat
620295Snx16sorting nexin 1629133589691357622Rat
1564543Chmp4ccharged multivesicular body protein 4C29139172991428652Rat
40929196LOC120101172U6 spliceosomal RNA29143141591431521Rat
1309519Zfand1zinc finger AN1-type containing 129144449791457540Rat
1306036Slc10a5solute carrier family 10, member 529145754091458844Rat
69254Impa1inositol monophosphatase 129146278191484057Rat
40939054LOC120093158uncharacterized LOC12009315829150191891512455Rat
1565000Fabp12fatty acid binding protein 1229153956891554999Rat
69309Fabp4fatty acid binding protein 429158087991585567Rat
620285Fabp9fatty acid binding protein 929159184291595873Rat
41007682Rnu6-999RNA, U6 small nuclear 99929159791491598020Rat
41215037LOC120101159U6 spliceosomal RNA29160059691600702Rat
1585218Pmp2peripheral myelin protein 229161133491615252Rat
7544216LOC102546353uncharacterized LOC10254635329162840391653943Rat
70997Fabp5fatty acid binding protein 529176505691768716Rat
41317556LOC120100768uncharacterized LOC12010076829188775991893327Rat
620394Pag1phosphoprotein membrane anchor with glycosphingolipid microdomains 129193537892076937Rat
1563869Zfp704zinc finger protein 70429217180492356059Rat
40998579LOC120100770uncharacterized LOC12010077029219118092206415Rat
708377Zbtb10zinc finger and BTB domain containing 1029247525492509892Rat
41397126LOC120100771uncharacterized LOC12010077129259591192650648Rat
1306767Tpd52tumor protein D5229273536592816079Rat
1597461Mrps28mitochondrial ribosomal protein S2829282067692951302Rat
40942995LOC120101256small nucleolar RNA SNORA3829291670592916823Rat
1596973Tpm2-ps1tropomyosin 2, pseudogene 129297216292974217Rat
41372438LOC120101326small nucleolar RNA SNORA1729308335293083478Rat
621403Hey1hes-related family bHLH transcription factor with YRPW motif 129309660593100316Rat
1585007Dtd2-ps1D-aminoacyl-tRNA deacylase 2, pseudogene 129318698793187785Rat
68947Stmn2stathmin 229320469093252011Rat
11441417LOC108349981uncharacterized LOC10834998129355442093631719Rat
2321312Psmb6l1proteasome 20S subunit beta 6 like 129383391493834630Rat
11373688LOC108350177voltage-dependent anion-selective channel protein 1 pseudogene29388395993885694Rat
41084533Rpl34-ps5ribosomal protein L34, pseudogene 529391420293914762Rat
1593213Hdac1-ps11Histone deacetylase 1, pseudogene 1129391671293951253Rat
2322842Mrpl1-ps2mitochondrial ribosomal protein L1, pseudogene 229412396094124766Rat
11367342LOC108350232uncharacterized LOC10835023229413026794134883Rat
11374486LOC108350233glyceraldehyde-3-phosphate dehydrogenase pseudogene29416530994166476Rat
41058740LOC120100774uncharacterized LOC12010077429420871694235985Rat
2904Il7interleukin 729423521994280075Rat
1311970Zc2hc1azinc finger, C2HC-type containing 1A29428735294324655Rat
40938094LOC120101358small nucleolar RNA SNORA1729432602094326096Rat
621021PkiacAMP-dependent protein kinase inhibitor alpha29439886994473638Rat
1593212Tex2-ps1testis expressed 2, pseudogene 129472449594832001Rat
41007168Rnu6-33RNA, U6 small nuclear 3329486382594863931Rat
41121272LOC120101252small nucleolar RNA SNORA2/SNORA34 family29490730594907427Rat
7602661LOC102550295uncharacterized LOC10255029529498515695010035Rat
41054388LOC120101113U2 spliceosomal RNA29499570194995871Rat
41231648LOC120101221U7 small nuclear RNA29502419395024260Rat
41369417LOC120100775uncharacterized LOC12010077529504909495142066Rat
41035132LOC120101115U2 spliceosomal RNA29541335995413467Rat
7672274LOC102550696uncharacterized LOC10255069629546978795483680Rat
1564247Senp5-ps1SUMO specific peptidase 5, pseudogene 129550132695504553Rat
1598157Cbx3-ps5chromobox 3, pseudogene 529574235195742892Rat
11447753LOC108350179serine/arginine repetitive matrix protein 1 pseudogene29594844595950705Rat
41119034Pgk1-ps3phosphoglycerate kinase 1, pseudogene 329597267495974057Rat
61814Pex2peroxisomal biogenesis factor 229605038096072928Rat
1563022Zfhx4zinc finger homeobox 429622476396408245Rat
1585005Impdh1-ps1inosine monophosphate dehydrogenase 1, pseudogene 129641178396597628Rat
41275022LOC120101339small nucleolar RNA SNORA1729773968397739817Rat
2323618Paics-ps2phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase, pseudogene 229775675197760325Rat
1310102Hnf4ghepatocyte nuclear factor 4, gamma29788577398036650Rat
1305234Ythdf3YTH N6-methyladenosine RNA binding protein F329835030498384608Rat
2320862Mrpl42-ps2mitochondrial ribosomal protein L42, pseudogene 229879353498794355Rat
1595487Tpm3-ps2tropomyosin 3, pseudogene 229897571098984032Rat
40992991LOC120101332small nucleolar RNA SNORA1729920127799201403Rat
41065891Hnrnpk-ps3heterogeneous nuclear ribonucleoprotein K, pseudogene 329955215599552870Rat
40958534Arpc1a-ps1actin related protein 2/3 complex, subunit 1A, pseudogene 129958158399583561Rat
11384865LOC108349983uncharacterized LOC10834998329958496799985951Rat
41016982Eif2s3-ps1eukaryotic translation initiation factor 2 subunit gamma, pseudogene 129967190399686497Rat
41338792LOC120101249small nucleolar RNA SNORA4429982670099826807Rat
40960807LOC120100778uncharacterized LOC1201007782100126406100138972Rat
2325576Mir124-2microRNA 124-22100134866100134974Rat
41074493Prpf38a-ps1pre-mRNA processing factor 38A, pseudogene 12100370140100371030Rat
1305451Bhlhe22basic helix-loop-helix family, member e222100486400100489510Rat
2483Cyp7b1cytochrome P450 family 7 subfamily B member 12100502791100669713Rat
2320718Rpl30l3ribosomal protein L30-like 32100718361100718702Rat
40957973LOC120101264small nucleolar RNA SNORA482101035275101035413Rat
41377065LOC120100569uncharacterized LOC1201005692101100447101112987Rat
1560393Armc1armadillo repeat containing 12101608171101652198Rat
1304936Mtfr1mitochondrial fission regulator 12101678331101713547Rat
68391Pde7aphosphodiesterase 7A2101714767101806853Rat
40995327Rab5c-ps1RAB5C, member RAS oncogene family, pseudogene 12101841519101843700Rat
9271705LOC103691515uncharacterized LOC1036915152101871139101906931Rat
1591779Rpl13-ps12ribosomal protein L13, pseudogene 122101949431101950909Rat
1562486Dnajc5bDnaJ heat shock protein family (Hsp40) member C5 beta2101973726102066275Rat
1562890RGD1562890RGD15628902102083834102087515Rat
11431841Trnar-acg1transfer RNA arginine (anticodon ACG) 12102087287102087359Rat
41251936Trnay-gua8transfer RNA tyrosine (anticodon GUA) 82102087698102087791Rat
11467539Trnay-gua2transfer RNA tyrosine (anticodon GUA) 22102088114102088203Rat
1306943Trim55tripartite motif-containing 552102100229102142173Rat
41050540LOC120100781uncharacterized LOC1201007812102111026102124407Rat
620505Crhcorticotropin releasing hormone2102143055102144919Rat
1590660Cnot8-ps1CCR4-NOT transcription complex, subunit 8, pseudogene 12102238885102239831Rat
41307645Rnu6-767RNA, U6 small nuclear 7672102241494102241597Rat
11423168LOC108350235succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial pseudogene2102277631102278359Rat
1584592Rrs1-ps9ribosome biogenesis regulator 1 homolog, pseudogene 92102363614102365829Rat
2387Cpceruloplasmin2102439433102498075Rat
1310548Hps3HPS3, biogenesis of lysosomal organelles complex 2 subunit 12102484574102527580Rat
1309031Hltfhelicase-like transcription factor2102549724102609492Rat
621785Gyg1glycogenin 12102611888102653916Rat
1583489Eif4g1-ps1eukaryotic translation initiation factor 4 gamma 1, pseudogene 12102692061102697515Rat
2390Cpa3carboxypeptidase A32102712483102744219Rat
2391Cpb1carboxypeptidase B12102755241102785628Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10387D2Mgh261382102771168102771306Ratregion
34190D2Mgh1915428357507283575226Ratregion
33620D2Mit618727653932276539510Ratregion
37274D2Rat13525928745171787451978Ratregion
37474D2Rat27620528219398082194185Ratregion
36918D2Rat2416529822659898226760Ratregion
37132D2Rat14413127689708576897216Ratregion
37664D2Rat16721527799114877991361Ratregion
37816D2Rat14521729044253590442742Ratregion
36693D2Rat7514227866561678665758Ratregion
34914D2Rat2317428766843287668614Ratregion
34914D2Rat2317428766843287668614Ratregion
35148D2Rat2713929435940794359546Ratregion
35729D2Rat2517529923679099236961Ratregion
35929D2Rat12213729634548996345626Ratregion
40478D2Rat27722528234589382346118Ratregion
40612D2Rat2781162102104121102104430Ratregion
40612D2Rat2781162102104314102104430Ratregion
38592D2Rat11322429154614191546365Ratregion
38726D2Rat16316129032856090328721Ratregion
39216D2Rat9521028231645282316662Ratregion
39370D2Rat21211828168982681689944Ratregion
39388D2Rat21320429511671195116915Ratregion
39512D2Rat21013828112456881124716Ratregion
42288D2Rat33024229175339291753616Ratregion
42581D2Rat32410128197420681974307Ratregion
42582D2Rat32514028325069983250839Ratregion
42584D2Rat32725528409485284095107Ratregion
42585D2Rat32816228346875083468912Ratregion
42586D2Rat33221529415028194150482Ratregion
42587D2Rat32922229991151999911741Ratregion
40844D2Rat21120328182992381830126Ratregion
41038D2Rat21411529265932992659444Ratregion
41744D2Rat27915529907464499074799Ratregion
41758D2Rat27219627668044076680636Ratregion
41788D2Rat27521528175453081754745Ratregion
41894D2Rat33113129895627398956398Ratregion
44552D9Wox2113627919041979190476Ratregion
43502D2Got3624427750311977503363Ratregion
43503D2Got3812727734517377345300Ratregion
43505D2Got3712927772448077724609Ratregion
43507D2Wox2818427960689479607078Ratregion
43508D2Got4628628320380083204086Ratregion
43510D2Got3322928195690881957137Ratregion
43512D2Got4119728189140881891603Ratregion
43517D2Got6815829175339291753550Ratregion
43518D2Got7314529174503291745177Ratregion
43519D2Got6415129302661593026768Ratregion
43521D2Got7018729375581993756006Ratregion
43527D2Got5316729631930696319473Ratregion
43529D2Got5817129468053794680708Ratregion
60329D2Got521162101077038101078259Ratregion
60329D2Got521162101078143101078259Ratregion
60330D2Got5519529775616897756365Ratregion
60331D2Got5627029810354898103818Ratregion
60332D2Got5717129792988597930056Ratregion
60314D2Got19625129841090298411157Ratregion
625765D2Got601352100773874100774009Ratregion
66482D2Uia1621029978953899789748Ratregion
66651D2Mco1221528076214780762364Ratregion
66657D2Mco164192102202080102202499Ratregion
66661D2Mco1814427866561978665763Ratregion
67750D2Uwm3119327899766278997855Ratregion
67770D2Uwm613529823746598237600Ratregion
1630515D2Ulb819927892342178923620Ratregion
1631348D2Ulb1627427799718577997459Ratregion
1631772D2Uia1810529368481193684916Ratregion
1579021D2Chm17224627879433478794584Ratregion
1628349D2Wox4822429159359791593821Ratregion
1629907D2Ulb1821329374284993743062Ratregion
1638728D2Got32322729142947191429834Ratregion
1638728D2Got32322729142960791429834Ratregion
1639967D2Got41621829627894296279160Ratregion
1640758D2Got32415728786440087864550Ratregion
1635087D2Ulb910829187251491872622Ratregion
1635810D2Got40426328483136884831631Ratregion
1636528D2Got33213129712193897121971Ratregion
1638455D2Got42716429434871394348877Ratregion
1638470D2Wox552352102438708102438945Ratregion
1633796D2Got38112027858043978580561Ratregion
1633857D2Got39129929822572398226023Ratregion
1633981D2Cebr211029302526093025370Ratregion
1634150D2Wox541802102437904102438084Ratregion
1634704D2Got32511228728944787289559Ratregion
7364905rs106982173029335364293353642Ratregion
7206294Spic60228949525389495855Ratregion
7205886px-34a8029561454495614717Ratregion
5035747D5S23179928201556082015659Ratregion
5035771PMC165967P743329564014295640575Ratregion
5038672BB21001212229940220199402323Ratregion
5038754RH1273131912102608853102609044Ratregion
5036370Il716529427864694278811Ratregion
5039234RH12758918328677048386770666Ratregion
5039124RH12752619228225150582251697Ratregion
5036701AU04892010328834051488340617Ratregion
5036855AU04942318627813367778133863Ratregion
5035526C130041O22Rik39129622746996227860Ratregion
5035608D8S1385E11029320479093204900Ratregion
5035633A001Y0410729838443498384541Ratregion
5033855RH14037116327850521078505373Ratregion
5028713A009S3514828742665987426807Ratregion
5028741RH4595015429622758096227734Ratregion
5031524AU04804523429042244190422672Ratregion
5031524AU04804523429042244190422692Ratregion
5029201RH1439011972100134296100134493Ratregion
5031896AU0467879029856139898561488Ratregion
5029241RH14404912127853262778532748Ratregion
5029543BG3754471362101255007101255143Ratregion
5032253AU017667902102612002102612092Ratregion
5035446BQ19355720229554450095544702Ratregion
5034884AI16976113329788598897886121Ratregion
5034966AI01017218528228051982280704Ratregion
5032807RH13537120628222298982223195Ratregion
5033003RH13725025028674167486741924Ratregion
5030251BE11149516029604975596049915Ratregion
5025128RH12660820627829279878293004Ratregion
5027769RH946701632100503471100503635Ratregion
5027811RH948359029427631194276401Ratregion
5033197RH1379411362102486358102486494Ratregion
5025534RH1286962002102611924102612124Ratregion
5025572RH12884116328259080182590964Ratregion
5030869BE12097015028151592181516071Ratregion
5025818RH12979721228699743786997649Ratregion
5055073RH14359012727861816778618294Ratregion
5053449RH14265514027829305478293194Ratregion
5052093RH948361052102712656102712761Ratregion
5057468AA85874821128827513788275348Ratregion
5054679RH14336310529940181599401920Ratregion
5055719RH14396326029840945098409710Ratregion
5057896BE1016801842102519250102519434Ratregion
5058590BE10212818228161148881611670Ratregion
5055923RH14408112028462264684622766Ratregion
5055175RH14364914629148612591486271Ratregion
5056289RH14429214427820429878204442Ratregion
5058734AI54954711128570211785702228Ratregion
5058734AI54954711128628036286280473Ratregion
5058094BE10196218628164847581648661Ratregion
5058198BF38679819828149899381499191Ratregion
5055497RH14383527827877444678774724Ratregion
5052569AI31466811929967240499672523Ratregion
5052897RH14233715529207665392076808Ratregion
5050762RH13424418529151178691511971Ratregion
5053689RH14279411927850624078506359Ratregion
5049834RH13370819427713995477140148Ratregion
5051296RH1345522012102755277102755478Ratregion
5051346AW06122414729285585592856002Ratregion
5050700RH13420818028447374784473927Ratregion
5053357RH1426021382101610125101610263Ratregion
5051485AW54596612128733261987332736Ratregion
5040948RH12857521128201540282015613Ratregion
5043368RH12998618428687192786872111Ratregion
5041296RH12877520929176510191765310Ratregion
5043540RH13008419129295105792951248Ratregion
5045008RH13093021029428031394280523Ratregion
5045628RH13128719329145406391454256Ratregion
5041834RH12908519628424289784243095Ratregion
5046554RH13182021129427888994279100Ratregion
5047494RH13236018129304474193044922Ratregion
5048876RH13315721528261747482617689Ratregion
5046626RH13186220428748282487483028Ratregion
5047338RH13227019828461863684618834Ratregion
5039706RH12786019128424273284242920Ratregion
5039830RH12793120929151212091512329Ratregion
5042452RH12944220629439905394399259Ratregion
5040210RH12815318127850567278505853Ratregion
5039426RH12769921929066991490670133Ratregion
5039534RH12776118728245587382456060Ratregion
5041944RH12914918129439890894399089Ratregion
7191218D2Mit618927653932276539510Ratregion
5042290RH12934921228677044986770661Ratregion
5043398RH13000318227814438578144567Ratregion
5042738RH1296162182102611995102612213Ratregion
5040464RH12829819429148362491483818Ratregion
7193028Krt1816727891141678911583Ratregion
5043006RH12977516128259080282590963Ratregion
5043014RH12977918829439896794400249Ratregion
5041466RH12887318629158416991585447Ratregion
5073828RH1376621272102642592102642719Ratregion
5075250RH13848616427851332078513484Ratregion
5074132RH13784015727840744278407599Ratregion
5076716RH13933712028234708282347202Ratregion
5077060RH13953618027850521078505390Ratregion
5076068RH13896017729428761394287790Ratregion
5075112RH13840518829161294891614449Ratregion
5079444RH14100119129247550092475691Ratregion
5076620RH13928122629320330093203526Ratregion
5076410RH1391591202102141308102141428Ratregion
5077418RH13974518229940246299402644Ratregion
5077462RH13977018129428761394287794Ratregion
5077480RH1397802152101716101101716316Ratregion
5079840RH1412331882101712146101712334Ratregion
5078516RH1403881862102609025102609211Ratregion
5080138RH14140620728373511083735317Ratregion
5079258RH14087521629251219092512406Ratregion
5079272RH14088518128464224084642421Ratregion
5079302RH14090319028259166482591854Ratregion
5080300RH1415001822102497797102497979Ratregion
5080502RH1416162172100488307100488524Ratregion
5071228RH13496121628552648285526698Ratregion
5074148RH13784913329677958296779715Ratregion
5074228RH13789515129216920492169355Ratregion
5073534RH13749221228201089282011104Ratregion
5073764RH13762522028220168182201901Ratregion
5074856RH13825817727815796778158144Ratregion
5071858RH13532519827948508479485282Ratregion
5061768AW5332909828675547786755575Ratregion
5063374BI30178121329103455191034764Ratregion
5063424BF4042461732101714403101714576Ratregion
5066688AU04820920929448336194483570Ratregion
5067456AU04773229028141490681415196Ratregion
5067724AU04757420429364029993640503Ratregion
5068062AU0473701512102560975102561122Ratregion
5068356AU04719616829276243092762600Ratregion
5068358AU04719414227798317077983314Ratregion
5068646AU04701222129838001698380231Ratregion
5068700AU0469879929676505296765151Ratregion
5070311RH12647724527828050178280746Ratregion
5070342AI504870832102755452102755535Ratregion
5062018AI45412618829320485193205039Ratregion
5062204BE10632215127869822178698372Ratregion
5062310BI28866720529216106192161266Ratregion
5062648BF40366913627816335478163490Ratregion
5062766AW53437915829247653292476690Ratregion
5064186BE11419015028705016287050312Ratregion
5060258AI11183420329212389392124096Ratregion
5062060BF39734724427730501277305256Ratregion
5063598BE10781515029309990893100058Ratregion
5063758AI0438019229606530596065397Ratregion
5065390BE11531416627854406078544226Ratregion
5062904AW52886115027699947576999625Ratregion
5066176AA92595115629281585592816012Ratregion
5061316BI29372820829234884092349048Ratregion
5061334BF39624013529839176598391900Ratregion
5064752BF40501121128228302582283236Ratregion
5066412AU04837220228421982084220022Ratregion
5084206AA89391616728674630286746469Ratregion
5086857AI10459419428261809782618291Ratregion
5087040AI00785517129622821196228382Ratregion
5087440PMC165967P845129560990595610356Ratregion
5082649BE11992917027861174078611910Ratregion
5086586BM38587017829247751492477692Ratregion
5082899BF39036218327827306878273251Ratregion
5087442PMC165967P943929557329195573730Ratregion
5089899AU04942915129248849592488646Ratregion
5083403BF39107018229228641492286596Ratregion
5088503AU04860827129830080498301075Ratregion
5083801AI41296618128228261382282794Ratregion
5089633AU04927121727903559579035812Ratregion
5089637AU0492731722100554056100554228Ratregion
5084082AI23323321429606611996066333Ratregion
5090039AU04951428828182557581825865Ratregion
5090181AU04959910427831235478312458Ratregion
5081933BE11878420328747845287478655Ratregion
5085080AW5331181962101608470101608666Ratregion
5088213AU04843430327904642079046719Ratregion
5080984RH14189618429145564791455831Ratregion
5088719AU0487378429535796495358048Ratregion
5088745AU0487531762102661120102661296Ratregion
5085501BM39048619428473317684733370Ratregion
5089069AU0489361682101346887101347055Ratregion
5084990AI00888620328700346387003666Ratregion
5081635BE11772118527728315677283341Ratregion
5083815AA892399932101713223101713316Ratregion
5503550ZFH4__493877329622737996228152Ratregion
5504298D8S1388E8929320471993204809Ratregion
5504809ha2145027888226678882787Ratregion
5505128Krt1876327891062078911453Ratregion
5505128Krt1876327891069078911453Ratregion
5505899UniSTS:4960149128359670883596799Ratregion
5506125UniSTS:4984218328678067786780760Ratregion
5507197UniSTS:22524619629157084391571039Ratregion
5506941G3282014828742665987426807Ratregion
5499775UniSTS:23463931029247549592475805Ratregion
5501299CP-000F2122102457192102458466Ratregion
5505016Mirn124a-21042100134865100134969Ratregion
5502776GYG11172102648215102648332Ratregion
5502849Bhlhb58712100487952100488823Ratregion
152025241rs107362207028081652480816524Ratregion
Position Markers

Flank 1: (D2Mit6)
Rat AssemblyChrPosition (strand)Source
GRCr8278,269,809 - 78,269,996 (+)Marker Load Pipeline
mRatBN7.2276,539,322 - 76,539,510 (+)MAPPER
Rnor_6.0278,466,075 - 78,466,260RGD
Rnor_6.0278,321,410 - 78,321,595RGD
Rnor_5.0298,153,283 - 98,153,468RGD
Rnor_5.0298,037,122 - 98,037,307RGD
RGSC_v3.4277,630,629 - 77,630,814UniSTS
RGSC_v3.1277,561,812 - 77,562,125RGD
Celera272,243,967 - 72,244,152UniSTS
RH 3.4 Map2500.7UniSTS
RH 3.4 Map2500.7RGD
RH 2.0 Map2406.8RGD
SHRSP x BN Map229.4498RGD
Cytogenetic Map2 RGD
Peak: (D2Mit6)
Rat AssemblyChrPosition (strand)Source
GRCr8278,269,809 - 78,269,996 (+)Marker Load Pipeline
mRatBN7.2276,539,322 - 76,539,510 (+)MAPPER
Rnor_6.0278,466,075 - 78,466,260RGD
Rnor_6.0278,321,410 - 78,321,595RGD
Rnor_5.0298,153,283 - 98,153,468RGD
Rnor_5.0298,037,122 - 98,037,307RGD
RGSC_v3.4277,630,629 - 77,630,814UniSTS
RGSC_v3.1277,561,812 - 77,562,125RGD
Celera272,243,967 - 72,244,152UniSTS
RH 3.4 Map2500.7UniSTS
RH 3.4 Map2500.7RGD
RH 2.0 Map2406.8RGD
SHRSP x BN Map229.4498RGD
Cytogenetic Map2 RGD
Flank 2: (Cpb1)
Rat AssemblyChrPosition (strand)Source
GRCr82104,684,275 - 104,744,824 (-)NCBI
mRatBN7.22102,755,241 - 102,785,628 (-)NCBI
mRatBN7.2 Ensembl2102,755,241 - 102,785,628 (-)Ensembl
UTH_Rnor_SHR_Utx2109,302,257 - 109,332,662 (-)NCBI
UTH_Rnor_SHRSP_BbbUtx_1.02107,423,440 - 107,453,849 (-)NCBI
UTH_Rnor_WKY_Bbb_1.02102,350,160 - 102,384,224 (-)NCBI
Rnor_6.02105,059,293 - 105,089,682 (-)NCBI
Rnor_6.0 Ensembl2105,059,426 - 105,089,659 (-)Ensembl
Rnor_5.02124,787,804 - 124,850,792 (-)NCBI
RGSC_v3.42105,413,336 - 105,443,909 (-)NCBI
RGSC_v3.12105,358,297 - 105,388,871 (-)NCBI
Celera298,123,613 - 98,155,223 (-)NCBI
Cytogenetic Map2q24NCBI


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1578777Stresp15Stress response QTL 1520.05blood aldosterone amount (VT:0005346)plasma aldosterone level (CMO:0000551)259846005104846005Rat
2293671Bss44Bone structure and strength QTL 4410.970.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)243162366148478373Rat
1298074Bp164Blood pressure QTL 1640.003arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
1598865Bp296Blood pressure QTL 2962.1arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)281018907126018907Rat
1354648Bp239Blood pressure QTL 2390.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266118463226797303Rat
1578772Stresp14Stress response QTL 1450.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)282345893130923501Rat
1354649Kidm17Kidney mass QTL 172.9kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)281754530227146641Rat
2293676Bmd19Bone mineral density QTL 1910.70.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)243162366111362592Rat
10755499Bp389Blood pressure QTL 3892.61arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)218960362228801039Rat
2293682Bmd24Bone mineral density QTL 248.90.0001femur mineral mass (VT:0010011)compact volumetric bone mineral density (CMO:0001730)243162366111362592Rat
152025242Bw191Body weight QTL 1913.62body mass (VT:0001259)238573329122609194Rat
1598862Glom9Glomerulus QTL 93.5kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)292337601137337601Rat
631198Cm22Cardiac mass QTL 224.30.0008heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)276539322150540526Rat
1598863Cm65Cardiac mass QTL 652.3heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)292337601137337601Rat
1302794Stl27Serum triglyceride level QTL 274.40.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)225413423143657569Rat
61465Bp13Blood pressure QTL 133.3blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)276539322102785628Rat
1581569Uae32Urinary albumin excretion QTL 320.0001urine protein amount (VT:0005160)urine albumin excretion rate (CMO:0000757)278665619219826953Rat
61467Bp14Blood pressure QTL 142.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)243154682202446871Rat
70174BpQTLCluster2Blood pressure QTL cluster 24.24arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)240067944102785628Rat
1358901Cm38Cardiac mass QTL 382heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423157142209Rat
631208Bw1Body weight QTL15.09mesenteric fat pad mass (VT:0010427)mesenteric fat pad weight to body weight ratio (CMO:0000654)24317101783575226Rat
2317058Aia13Adjuvant induced arthritis QTL 132.9joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)27653932277991361Rat
1331760Bp206Blood pressure QTL 2063.62454arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)256043031202447032Rat
2300165Bmd49Bone mineral density QTL 494.80.0001lumbar vertebra mineral mass (VT:0010511)bone mineral density (CMO:0001226)288862519133862519Rat
1358899Kidm23Kidney mass QTL 233.88kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358908Bw49Body weight QTL 493.36body mass (VT:0001259)body weight (CMO:0000012)225413652157142078Rat
5684990Bmd82Bone mineral density QTL 822.8tibia mineral mass (VT:1000283)bone mineral content (CMO:0001554)259324377103795077Rat
2300170Bmd45Bone mineral density QTL 4512.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)288862519133862519Rat
1358910Kidm27Kidney mass QTL 275.77kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
61355Bp36Blood pressure QTL 362.9blood pressure trait (VT:0000183)systolic blood pressure (CMO:0000004)25873687102844969Rat
1358911Kidm28Kidney mass QTL 285.42kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
1358904Cm39Cardiac mass QTL 392.26heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423157142209Rat
7411551Bw131Body weight QTL 13129.60.001body mass (VT:0001259)body weight gain (CMO:0000420)267942638112942638Rat
1359034Bp274Blood pressure QTL 274arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)27478666494359546Rat
1358887Bw50Body weight QTL 502.39body mass (VT:0001259)body weight (CMO:0000012)225413652157142078Rat
1298080Bp163Blood pressure QTL 1630.02arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)266118275202447032Rat
8662832Vetf7Vascular elastic tissue fragility QTL 73.5aorta elastin amount (VT:0003905)aorta wall extracellular elastin dry weight to aorta wall dry weight ratio (CMO:0002002)281689826221035911Rat
1298085Bp165Blood pressure QTL 1650.0006arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)242804607202447032Rat
2290453Scl55Serum cholesterol level QTL 552.83blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)226917817136917119Rat
2299162Iddm32Insulin dependent diabetes mellitus QTL 322.36blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)278665616143657569Rat
1358894Kidm24Kidney mass QTL 244.03kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)225413423157142209Rat
2300185Bmd46Bone mineral density QTL 468.40.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)288862519133862519Rat
61371Edpm1Estrogen-dependent pituitary mass QTL 140.05pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)23513484188029593Rat
724534Uae6Urinary albumin excretion QTL 610urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)278665619249053267Rat
1582246Cm60Cardiac mass QTL 605.8heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)25760561276539510Rat
61374Edpm2Estrogen-dependent pituitary mass QTL 24.420.86pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)276539322202447032Rat
631500Bp99Blood pressure QTL 992.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)259324719102755241Rat
10755436Coatc8Coat color QTL 80.02431coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23502311780023117Rat
61392Bp6Blood pressure QTL 67arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)280270434125270434Rat
1358917Cm42Cardiac mass QTL 422.82heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
5684996Bmd85Bone mineral density QTL 854.70.024tibia mineral mass (VT:1000283)bone mineral density (CMO:0001226)259324377103795077Rat
1358913Cm41Cardiac mass QTL 412.73heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
2293835Kiddil5Kidney dilation QTL 53.8kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242804607157142209Rat
1558653Prcr1Prostate cancer resistance QTL 15prostate integrity trait (VT:0010571)area of ventral prostate occupied by tumorous lesions to total ventral prostate area ratio (CMO:0000899)272532993157142209Rat
1354622Kidm16Kidney mass QTL 163kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)281754530222436696Rat
631266Bp132Blood pressure QTL 1320.0005arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)246123260202447032Rat
1354617Bp240Blood pressure QTL 2404arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)22691781781754745Rat
7207808Bmd89Bone mineral density QTL 894.1femur strength trait (VT:0010010)femoral neck ultimate force (CMO:0001703)288862519133862519Rat
1558648Smcn1Smooth muscle cell number QTL 10.039blood vessel smooth muscle cell quantity (VT:0010525)aorta smooth muscle cell count per unit vessel length (CMO:0001646)259134147127460910Rat
2293843Kiddil6Kidney dilation QTL 63.1kidney pelvis morphology trait (VT:0004194)hydronephrosis severity score (CMO:0001208)242804607182042367Rat
2306903Bp336Blood pressure QTL 3360.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)264366971109366971Rat
152025206Hrtrt23Heart rate QTL 235.98heart pumping trait (VT:2000009)228484589169504100Rat
1354605Rf48Renal function QTL 482.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)274786664206665859Rat
152025204Hrtrt22Heart rate QTL 225.6heart pumping trait (VT:2000009)228484589169504100Rat
1354601Slep1Serum leptin concentration QTL 15.39blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)243171017184114403Rat
61438Cia7Collagen induced arthritis QTL 74.60.0001joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)259324377141596857Rat
1354603Bp243Blood pressure QTL 2433.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)226917817127469484Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Bp13

RGD Curation Notes
Note Type Note Reference
qtl_cross_type backcross  
qtl_general WKY allele associated with decreased blood pressures 728179