Btemp2 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Btemp2 (Thermal response to stress QTL 2) Rattus norvegicus

Symbol: Btemp2
Name: Thermal response to stress QTL 2
RGD ID: 61443
Previously known as: Trs2
Trait: body temperature trait   (VT:0005535)    
Measurement Type: core body temperature   (CMO:0001036)    
LOD Score: 3.3
P Value: 9.4E-5
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21215,025,183 - 20,794,014RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01217,114,770 - 23,839,390RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01219,102,374 - 25,837,102RGDRnor5.0
RGSC_v3.41215,508,819 - 21,911,223RGDRGSC3.4
RGSC_v3.11215,538,810 - 21,898,486RGD
Cross Type: Not Available
Strains Crossed: SHR/Ola BN-Lx/Cub 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Measurement Method

Vertebrate Trait

Rat Strain
BN-Lx/Cub  (IEA)
SHR/Ola  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Contribution of autosomal loci and the Y chromosome to the stress response in rats. Dumas P, etal., Hypertension 2000 Feb;35(2):568-73

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3282Pdgfaplatelet derived growth factor subunit A121564554915667056Rat
3124Muc3mucin 3121952725119536924Rat
69313Acheacetylcholinesterase121940613319413713Rat
69317Irs3insulin receptor substrate 3121905314819055286Rat
69319Gnb2G protein subunit beta 2121915900219164021Rat
2187Azgp1alpha-2-glycoprotein 1, zinc-binding121693099016939333Rat
69284Sh2b2SH2B adaptor protein 2122042705720456845Rat
69361UncxUNC homeobox121509277915097300Rat
69399VgfVGF nerve growth factor inducible121963731319645123Rat
631339Plod3procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3121967638419686945Rat
727930Gjc3gap junction protein, gamma 3121689984616912309Rat
620747Slc12a9solute carrier family 12, member 9121936899019385881Rat
708472Asmtacetylserotonin O-methyltransferase121630471916309568Rat
621418Adap1ArfGAP with dual PH domains 1121532391315376110Rat
620618Cux1cut-like homeobox 1122010706220425868Rat
621333Stag3STAG3 cohesin complex component121728467717314936Rat
621558Vamp7vesicle-associated membrane protein 7121672848616764261Rat
621363Gpc2glypican 2121727787517284297Rat
619845Gper1G protein-coupled estrogen receptor 1121521721715222679Rat
3249Serpine1serpin family E member 1121960127219611657Rat
620606Zp3zona pellucida glycoprotein 3122069054720697513Rat
3270Pcolceprocollagen C-endopeptidase enhancer121908419119090508Rat
708392Cyp3a9cytochrome P450, family 3, subfamily a, polypeptide 9121680622216846428Rat
1304973Mospd3motile sperm domain containing 3121909520319100303Rat
62002Ywhagtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma122074450020772828Rat
61306Hspb1heat shock protein family B (small) member 1122079401420795675Rat
628728Il3rainterleukin 3 receptor subunit alpha121631808116323781Rat
2559Epoerythropoietin121920425819207948Rat
1306413Pop7POP7 homolog, ribonuclease P/MRP subunit121918938419190425Rat
1305631Cox19cytochrome c oxidase assembly factor COX19121530353515313014Rat
1305911Ap1s1adaptor related protein complex 1 subunit sigma 1121962526719635792Rat
3392Prkar1bprotein kinase cAMP-dependent type I regulatory subunit beta121549223315624942Rat
1305193Cyp2w1cytochrome P450, family 2, subfamily w, polypeptide 1121529155215296421Rat
1305095Fbxo24F-box protein 24121907266819083067Rat
1305044Zanzonadhesin121921501819322789Rat
1305017Dhrsxdehydrogenase/reductase X-linked121629976816304553Rat
1306590Agfg2ArfGAP with FG repeats 2121901222819048433Rat
1305405Zcwpw1zinc finger CW-type and PWWP domain containing 1121888062518910713Rat
1309933Gigyf1GRB10 interacting GYF protein 1121916607019181570Rat
1305370Ift22intraflagellar transport 22121975907219768859Rat
1307763Actl6bactin-like 6B121912488719141419Rat
1560550Mepcemethylphosphate capping enzyme121891179618916515Rat
1309735Lamtor4late endosomal/lysosomal adaptor, MAPK and MTOR activator 4121725865617262478Rat
1310463Zfp68zinc finger protein 68121602605816040995Rat
1306877Asmtlacetylserotonin O-methyltransferase-like121631533516318083Rat
1310991Zfand2azinc finger AN1-type containing 2A121516160115172679Rat
1561105Gal3st4galactose-3-O-sulfotransferase 4121726796317276951Rat
1311980Fam20cFAM20C, golgi associated secretory pathway kinase121582686415885423Rat
1559499Pilrb-ps7paired immunoglobin-like type 2 receptor beta, pseudogene 7121825144218257788Rat
1310198Polr2jRNA polymerase II subunit J122054303820548590Rat
1311608Taf6TATA-box binding protein associated factor 6121705586417064244Rat
1311660Get4guided entry of tail-anchored proteins factor 4121537700915394238Rat
1308608Alkbh4alkB homolog 4, lysine demethylase122052403020529947Rat
1305455Trappc14trafficking protein particle complex subunit 14121726274817267093Rat
1309919Cops6COP9 signalosome subunit 6121703897917041818Rat
1310152Tfr2transferrin receptor 2121910767319124622Rat
1306970Ssc4dscavenger receptor cysteine rich family member with 4 domains122070293120723732Rat
1307636Cnpy4canopy FGF signaling regulator 4121706464217070755Rat
1306668Fis1fission, mitochondrial 1121970856019723392Rat
1310964Nyap1neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1121895619218967624Rat
1309981Zscan21zinc finger and SCAN domain containing 21121699849617024167Rat
1309615Upk3buroplakin 3B122063023120637634Rat
1310213Orai2ORAI calcium release-activated calcium modulator 2122050030820520428Rat
1306932Mblac1metallo-beta-lactamase domain containing 1121707146517072736Rat
1310233Ap4m1adaptor related protein complex 4 subunit mu 1121704976617055954Rat
1332710Or7a43-ps1olfactory receptor family 7 subfamily A member 43, pseudogene 1121628844616289236Rat
1310678Cldn15claudin 15121969816719708419Rat
1306145Lrch4leucine rich repeats and calponin homology domain containing 4121905758219072573Rat
1303018Mcm7minichromosome maintenance complex component 7121704220717049470Rat
1560288Pum3-ps3pumilio RNA-binding family member 3, pseudogene 3121635713116359221Rat
1562172Spry3sprouty RTK signaling antagonist 3121666318816673124Rat
1566418C12h7orf50similar to human chromosome 7 open reading frame 50121518572815289042Rat
1566006Pilrb2l1paired immunoglobin like type 2 receptor beta 2 like 1121772021317732681Rat
1566028Dnaaf5dynein, axonemal, assembly factor 5121545363615492722Rat
1562406Sap25Sin3A-associated protein 25121905576219057425Rat
1561143Pilrb2paired immunoglobin like type 2 receptor beta 2121777304717779527Rat
1562319Nxpe5l3neurexophilin and PC-esterase domain family, member 5 like 3121723831117252723Rat
1560731Gpr146G protein-coupled receptor 146121525193615267217Rat
1359506Spnl1sialophorin like 1121613658316147719Rat
1359142Sun1Sad1 and UNC84 domain containing 1121539637815441277Rat
1560616Zkscan1zinc finger with KRAB and SCAN domains 1121696628716987680Rat
1560262Pilrb-ps6paired immunoglobin-like type 2 receptor beta, pseudogene 6121860905518630916Rat
1559588Pilrb2l4paired immunoglobin like type 2 receptor beta 2 like 4121739884417404810Rat
1564022Vom2r63vomeronasal 2 receptor, 63121762514117652806Rat
1559964Spnl2sialophorin like 2121612615016131108Rat
1359435Zfp157zinc finger protein 157121624823016279459Rat
1359442Lrwd1leucine-rich repeats and WD repeat domain containing 1122053003520543078Rat
1563400Pilrb2l2paired immunoglobin like type 2 receptor beta 2 like 2121856684118580286Rat
1566386Znf846zinc finger protein 846121597931216012933Rat
1585866PvrigPVR related immunoglobulin domain containing121736372117365577Rat
1584665Vom2r64vomeronasal 2 receptor, 64121841940918449218Rat
1562930Vom2r61vomeronasal 2 receptor, 61121743891117465634Rat
1584367Ppp1r35protein phosphatase 1, regulatory subunit 35121891590918919253Rat
1561790Dtx2deltex E3 ubiquitin ligase 2122064328920682908Rat
1562569Rps8-ps9ribosomal protein S8, pseudogene 9121604777616048497Rat
1583509Pilrb1l1paired immunoglobin-like type 2 receptor beta 1 like 1121808141018089619Rat
1561730Pilrb2l3paired immunoglobin like type 2 receptor beta 2 like 3121821053518216471Rat
1562525Pilrb2l5paired immunoglobin like type 2 receptor beta 2 like 5121767486017682715Rat
1559954Nxpe5l1neurexophilin and PC-esterase domain family, member 5-like 1121718656617196784Rat
1583180Trip6thyroid hormone receptor interactor 6121938621219390619Rat
1584380Tsc22d4TSC22 domain family, member 4121893915018952008Rat
1561258Myl10myosin light chain 10121996917419982627Rat
1583193Ephb4EPH receptor B4121932641119351667Rat
1584675Pilrb1paired immunoglobin-like type 2 receptor beta 1121851616118525375Rat
1564640Akap17aA-kinase anchoring protein 17A121631042716315166Rat
1593752Tubb4b-ps2tubulin, beta 4B class IVb, pseudogene 2121661134416612890Rat
1591401Col26a1collagen type XXVI alpha 1 chain121979269319938556Rat
1591241Srrtserrate, RNA effector molecule121939257819406098Rat
1587046Ptmal2prothymosin alpha like 2121715294917153791Rat
1587058Nxpe5l2neurexophilin and PC-esterase domain family, member 5 like 2121712410417142519Rat
1591278Echdc2-ps1enoyl CoA hydratase domain containing 2, pseudogene 1121898935318992172Rat
1565457Rasa4RAS p21 protein activator 4122055280520580177Rat
1588255Nxpe5neurexophilin and PC-esterase domain family, member 5121709762417119700Rat
1595919Cyp3a62cytochrome P450, family 3, subfamily a, polypeptide 62121639799816433833Rat
1595708Prkrip1PRKR interacting protein 1122047080220491789Rat
1595709LOC498158hypothetical LOC498158121686689516867939Rat
1592588Mogat3monoacylglycerol O-acyltransferase 3121966870319669420Rat
1594158Foxl3forkhead box L3121581217715814534Rat
1598237Upk3bl1uroplakin 3B like 1122061035320616366Rat
1598199Vom2r-ps104vomeronasal 2 receptor, pseudogene 104121786250917880232Rat
1598200Vom2r62vomeronasal 2 receptor, 62121752466217542226Rat
1598202Spn-ps8sialophorin, pseudogene 8121613127516133558Rat
1598204Spn-ps7sialophorin, pseudogene 7121610570516106765Rat
1597726Pilrbl1paired immunoglobin-like type 2 receptor beta like 1121879284018799391Rat
1626043Vom2r-ps103vomeronasal 2 receptor, pseudogene 103121829031018300323Rat
1626049Vom2r-ps101vomeronasal 2 receptor, pseudogene 101121837651218387463Rat
1641975Vom2r-ps107vomeronasal 2 receptor, pseudogene 107121801328818014187Rat
1625996Vom2r-ps100vomeronasal 2 receptor, pseudogene 100121846688518480996Rat
1625997Vom2r-ps98vomeronasal 2 receptor, pseudogene 98121606460616066575Rat
2319349Spn-ps6sialophorin, pseudogene 6121611083816117345Rat
2319106Rpl31l15ribosomal protein L31 like 15121689311116893551Rat
2322870Znhit1zinc finger, HIT-type containing 1121968660619692880Rat
2325388Mir106bmicroRNA 106b121704334417043425Rat
2325459Mir93microRNA 93121704313517043221Rat
2325466Mir339microRNA 339121527754615277641Rat
2325594Mir25microRNA 25121704293217043015Rat
4888576Mir702microRNA 702121968180919681915Rat
6489147Zfp113zinc finger protein 3121702210417033776Rat
6485223Muc3amucin 3A, cell surface associated121945067919454753Rat
6499303Spn-ps2sialophorin, pseudogene 2121611083816112028Rat
6499499Spn-ps1sialophorin, pseudogene 1121610035416101498Rat
6496729Pilrb-ps1paired immunoglobin-like type 2 receptor beta, pseudogene 1121860115618607655Rat
6496734LOC100910802uncharacterized LOC100910802121974235519757486Rat
6497070Spn-ps3sialophorin, pseudogene 3121615474016156686Rat
6497217Zcwpw1l1zinc finger CW-type and PWWP domain containing 1-like 1121779865017812208Rat
6497409Pilrapaired immunoglobin-like type 2 receptor alpha121778716917798149Rat
6498401LOC100910497paired immunoglobulin-like type 2 receptor alpha-like121886630118881290Rat
7536442LOC10254879440S ribosomal protein S27-like121577683915778793Rat
7536909Ufsp1UFM1-specific peptidase 1121940613319407147Rat
7556717Pilrb1l2paired immunoglobin-like type 2 receptor beta 1 like 2121881408518837515Rat
7581366Ccdc90b-ps1coiled-coil domain containing 90B, pseudogene 1121690674816908225Rat
7553419Pilrb1l3paired immunoglobin-like type 2 receptor beta 1 like 3121782366217828030Rat
7673409C130050O18RiklRIKEN cDNA C130050O18 gene like121522974315241457Rat
7675853LOC102551138uncharacterized LOC102551138121717846417200736Rat
7682710LOC102547493uncharacterized LOC102547493121543065715453779Rat
9133748LOC103691050uncharacterized LOC103691050121563246015636507Rat
9205257LOC103691091NHP2-like protein 1 pseudogene121701804017019347Rat
9368177Elocl1elongin C like 1121698971716991140Rat
9261510LOC103693637ras-related protein Rap-1b pseudogene121882114618821924Rat
9263674LOC103691283uncharacterized LOC103691283121936730619368987Rat
11466946Vmn2r116l-ps4vomeronasal 2, receptor 116 like, pseudogene 4121758263517615711Rat
11442159Spacdrsperm acrosome developmental regulator121893060818936787Rat
11414185Npm1-ps12nucleophosmin 1, pseudogene 12121513561915136849Rat
11492645Pilrb-ps2paired immunoglobin-like type 2 receptor beta, pseudogene 2121877185018777708Rat
41378758Fus-ps5FUS RNA binding protein, pseudogene 5121657167116577185Rat
41111819Rpl34-ps3ribosomal protein L34, pseudogene 3121696413416964559Rat
41111820Pilrb1l4paired immunoglobin-like type 2 receptor beta 1 like 4121822248018237114Rat
41202788LOC120095904uncharacterized LOC120095904121872580418728687Rat
41169192LOC120095853uncharacterized LOC120095853121865363018661701Rat
41145634Vmn2r116l-ps10vomeronasal 2, receptor 116 like, pseudogene 10121794226217956785Rat
41173580Pilrb2l7paired immunoglobin like type 2 receptor beta 2 like 7121885345218861001Rat
41389804Vmn2r116l-ps7vomeronasal 2, receptor 116 like, pseudogene 7121790355317929309Rat
41120780LOC120095911uncharacterized LOC120095911121954803519556511Rat
41148403LOC120096097U6 spliceosomal RNA122064436520644470Rat
41122052Rap1b-ps1RAP1B, member of RAS oncogene family, pseudogene 1121773295517734674Rat
41150475Spn-ps5sialophorin, pseudogene 5121614788516150072Rat
41214653LOC120095913uncharacterized LOC120095913122062250520633507Rat
41102335Rap1b-ps2RAP1B, member of RAS oncogene family, pseudogene 2121775685017757928Rat
41397405LOC120095912uncharacterized LOC120095912122004641720053457Rat
41070362LOC120095896NXPE family member 3-like121720844017225545Rat
41184641Rps11-ps6ribosomal protein S11, pseudogene 6122078737120791987Rat
41105168Vmn2r116l-ps11vomeronasal 2, receptor 116 like, pseudogene 11121803529818043422Rat
41199718LOC120095907uncharacterized LOC120095907121941722819420134Rat
41201467Vmn2r116l-ps8vomeronasal 2, receptor 116 like, pseudogene 8121831329718350370Rat
40977068Pilrb2l8paired immunoglobin like type 2 receptor beta 2 like 8121774431517756074Rat
40927760LOC120096095U6 spliceosomal RNA122072241820722523Rat
40958426Trim56tripartite motif containing 56121954491319567324Rat
40984024LOC120095955mucin-12-like121948604119493995Rat
40963637Pilrb-ps4paired immunoglobin-like type 2 receptor beta, pseudogene 4121870450918710373Rat
40942766Pilrb-ps3paired immunoglobin-like type 2 receptor beta, pseudogene 3121880167318811757Rat
40994669LOC120095953mucin-3A-like121943221419442687Rat
41314880Rap1b-ps3RAP1B, member of RAS oncogene family, pseudogene 3121883809818839898Rat
41016460Ppp1r14b-ps2protein phosphatase 1, regulatory (inhibitor) subunit 14B, pseudogene121589313815975566Rat
41017732Trnag-acc1transfer RNA glycine (anticodon ACC) 1121822243818222512Rat
41045133Muc3l1mucin 3 like 1121945578319462165Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
11051D12Mit2217121961087019611091Ratregion
11052D12Wox11196121961088619611090Ratregion
11053D12Wox12198121961088919611095Ratregion
34417D12Mgh2163121983578919835952Ratregion
33725D12Mit1259121502494215025183Ratregion
37272D12Rat28120121580606515806191Ratregion
37318D12Rat29150121731067817310845Ratregion
36538D12Rat7161121994867819948839Ratregion
38094D12Rat47209121507055115070761Ratregion
40408D12Rat91160121587265315872803Ratregion
40702D12Rat69211121995043219950632Ratregion
41384D12Rat70154121964216619642312Ratregion
42965D12Rat92248122078029620780530Ratregion
44959D12Got34207121690215316902360Ratregion
44960D12Got35142121709872117098867Ratregion
44962D12Got36139121637919316379328Ratregion
44963D12Got32176121709874417098921Ratregion
44965D12Got40230121986903919869269Ratregion
44967D12Got41157121981117419811331Ratregion
44968D12Got39155121958899819589153Ratregion
60012D12Got105128121966594319666071Ratregion
60016D12Got43159122021785420218013Ratregion
62471D2Uia1271121531710015317367Ratregion
629605D12Hmgc1181121693293516933106Ratregion
1639781D12Got226103121885849018858588Ratregion
7193095AA957504192122056484220565034Ratregion
5038642C7881584121891612518916209Ratregion
5038900RH127397183121545384115454024Ratregion
5038976RH127441189122055290720553096Ratregion
7206646Uncx762121509328415094046Ratregion
5036229RH125705271121891612718916398Ratregion
5039264RH127606214121909906119099369Ratregion
5035701WI-1509899122051691720517016Ratregion
5026248RH131481203121905506519055268Ratregion
5026390RH132022208121680627916806487Ratregion
5032014AU046360137122042936920429506Ratregion
5026664RH133068206122011796220118168Ratregion
5029583BE101310183121891477118914954Ratregion
5029597BF39272691121823055218230643Ratregion
5029597BF39272691121866157218661663Ratregion
5032677RH134888187121918832419188511Ratregion
5027307AI957187130122063042920630559Ratregion
5027309C87323158121698237116982529Ratregion
5035172AW535112158121891724618917404Ratregion
5030109BE098443174122077106320771237Ratregion
5025010AU022494218122064331020643528Ratregion
5030377AI029876207121919015919190366Ratregion
5025366RH128037199121537784015378039Ratregion
502792734.MMHAP64FRD10.seq167121783206317832230Ratregion
502792734.MMHAP64FRD10.seq167121826180818261975Ratregion
5031169BE116815180121702291417023094Ratregion
5052035RH94802159121905508519055244Ratregion
5056215RH144250222121689725716897479Ratregion
5053831RH142876162121972227819722440Ratregion
5056941RH144669170122062949720629667Ratregion
5057524AW522797179121973677219736951Ratregion
5052767RH142261173121539647415396647Ratregion
5052771RH142264200121891628218916482Ratregion
5052777RH142267176121969243419692767Ratregion
5052877RH142325199121970860219708801Ratregion
5053041RH142420213121961038119610594Ratregion
5060020BF400282137121642471516424853Ratregion
5058468BI290373119121904175919041878Ratregion
5057674BE101305210122063109820631323Ratregion
5050030RH133822180122072445920724639Ratregion
5051014RH134388193122054331420544059Ratregion
5054111RH143037258121894651918946777Ratregion
5050348RH134004190121564244215642632Ratregion
5050418RH134045201121603969416039895Ratregion
5052917RH142348187121893931618939503Ratregion
5053021RH142408193122077129820771491Ratregion
5050558RH134125189121521725315217442Ratregion
5053113RH142461223122043796120438184Ratregion
5041840RH129089153122049162220491775Ratregion
5041864RH129103181121726217117262352Ratregion
5043946RH130322189122064332520643514Ratregion
5043946RH130322189122064332520643514Ratregion
5044092RH130405184122052007820520262Ratregion
5044526RH130654157121736540517365562Ratregion
5043588RH130111182122040972020409902Ratregion
5043758RH130210195121940742319407618Ratregion
5044998RH130924195122063324720633442Ratregion
5045060RH130960182121582687915827061Ratregion
5045390RH131150198122063030020630498Ratregion
5045500RH131214150121517246215172612Ratregion
5046324RH131687211121537579615376007Ratregion
5044570RH130679182121539647415396656Ratregion
5045482RH131203181121891808518918266Ratregion
5046526RH131804181121631043316310614Ratregion
5047598RH132420208121562464215624850Ratregion
5047648RH132448181121676227916762460Ratregion
5045860RH131420212121676377616763988Ratregion
5049214RH133351202121893935518939557Ratregion
5049310RH133407186121531262315312809Ratregion
5046828RH131978185121525209915252284Ratregion
5048172RH132750204121966882219669213Ratregion
5049386RH133451216121701325417013470Ratregion
5047034RH132096181121862447318624655Ratregion
5047170RH132174220122054270220543016Ratregion
5042134RH129259153121932655619326709Ratregion
5048412RH132889186122071847020718656Ratregion
5039900RH127972197121537703715377234Ratregion
5042866RH1296920121961138519611585Ratregion
5043508RH130065196121630434816304544Ratregion
5040018RH128042210121704236017042716Ratregion
5041142RH128686150121631792416318074Ratregion
5075028RH138357220121597935815979578Ratregion
5075242RH138481168121693730316937471Ratregion
5074172RH137863142121508424415084386Ratregion
5076376RH139139184121976060319760787Ratregion
5077384RH139725204121704189017042094Ratregion
5076140RH139002205121698743016987635Ratregion
5077140RH139585207122042537620425583Ratregion
5077820RH139978188121904339719043585Ratregion
5078632RH140457187121938544919385636Ratregion
5073154RH137270199122077129120771490Ratregion
5080384RH141548208121905818219058390Ratregion
5073650RH137560171121904820619048377Ratregion
5073004RH137179181121705597317056154Ratregion
5072352RH136799122121893095418931076Ratregion
5071600RH135176180122048822720488407Ratregion
5061796AW533576155121726801617268171Ratregion
5065020BF405489221121937333519373556Ratregion
5067440AU047743166122031501620315182Ratregion
5068848AU046888175121668258616682756Ratregion
5070191RH94525173121693691216937085Ratregion
5070281RH94577178121961122919611407Ratregion
5069268AU046608248121960177419601850Ratregion
5065320BE121431161121701953117019692Ratregion
5063976BE120355168122040815620408325Ratregion
5065682BF41274694122028856420288658Ratregion
5065714BF406262207121589157615891783Ratregion
5065718BF406289115121705720617057321Ratregion
5064398BF411168226122033705820337284Ratregion
5063520BE107745162121522979215229954Ratregion
5065274BE121325159121541681815416977Ratregion
5065400AA95750490122056478220564872Ratregion
5060396AW525445170121564519015645360Ratregion
5062218BF397585213121691167316911886Ratregion
5061170BE099159165121976230319762468Ratregion
5064588BF399394153121956683219566985Ratregion
5063112BE113733168121921674619216914Ratregion
5063286BI301666185121706271417062900Ratregion
5064902BE108699150121624945616249606Ratregion
5086535AW529990171121643362116433792Ratregion
5083337BF417900202122076495320765155Ratregion
5090807AU049974208122017595020176158Ratregion
5088579AU048654176121742593117426107Ratregion
5090261AU049646126121531128715311413Ratregion
5088139Uncx4.198121509279115092889Ratregion
5082163BI280199151121963525119635402Ratregion
5080834RH141809180121690761816907812Ratregion
5089193AU049010210121953746719537677Ratregion
5082587BF416395169121698410416984273Ratregion
5081258RH142057192122052421920524411Ratregion
5081388AI454263194121531086415311058Ratregion
5086787BE107332214122051587620516090Ratregion
5502918Prkar1b751121562410215624853Ratregion
5503867SSC3D06197122077254720772744Ratregion
5504742PMC86565P2601121905335319053954Ratregion
5504314D12S1240E100121773411417734214Ratregion
5504314D12S1240E100121775751717757617Ratregion
5504314D12S1240E100121883894918839049Ratregion
5683882D12Hmgc5193121837715918377352Ratregion
5683884D12Hmgc6121921261419212979Ratregion
5683884D12Hmgc6121921274219212979Ratregion
5505961Gnb2390121916298219163459Ratregion
5505360Ache1290121941012219411412Ratregion
5506270GDB:458569784122054586220545946Ratregion
5500240AI747533103121704270517043542Ratregion
5499615MARC_2660-2661:991933047:1307121773349017733786Ratregion
5499615MARC_2660-2661:991933047:1307121775689317757189Ratregion
5499615MARC_2660-2661:991933047:1307121882122918821524Ratregion
5499615MARC_2660-2661:991933047:1307121883832518838621Ratregion
5499895UniSTS:235349192121539658615396778Ratregion
5499899UniSTS:235344206121963543119635637Ratregion
5503556UniSTS:463940304121941027519410579Ratregion
5501175PMC15197P30121960956619610072Ratregion
5505116LOC783396150121581353015813680Ratregion
5501724UniSTS:266994207121932685119327058Ratregion
5502066MARC_26575-26576:1033748265:10121909595319096548Ratregion
5502126MARC_5081-5082:996690120:1683121912715019127833Ratregion
5502307RH124339154121698989516990049Ratregion
5502307RH124339154121698989516990049Ratregion
Position Markers

Flank 1: (Hspb1)
Rat AssemblyChrPosition (strand)Source
GRCr81226,430,640 - 26,432,301 (-)NCBI
mRatBN7.21220,794,014 - 20,795,675 (-)NCBI
mRatBN7.2 Ensembl1220,794,028 - 20,795,743 (-)Ensembl
UTH_Rnor_SHR_Utx1221,935,462 - 21,937,122 (-)NCBI
UTH_Rnor_SHRSP_BbbUtx_1.01222,547,858 - 22,549,518 (-)NCBI
UTH_Rnor_WKY_Bbb_1.01221,613,792 - 21,615,453 (-)NCBI
Rnor_6.01223,839,390 - 23,841,051 (-)NCBI
Rnor_6.0 Ensembl1223,839,399 - 23,841,049 (-)Ensembl
Rnor_5.01225,837,102 - 25,838,663 (-)NCBI
RGSC_v3.41221,911,223 - 21,912,784 (-)NCBI
RGSC_v3.11221,898,486 - 21,900,048 (-)NCBI
Celera1222,557,404 - 22,559,067 (-)NCBI
Cytogenetic Map12q12NCBI
Peak: (D12Wox9)
Rat AssemblyChrPosition (strand)Source
Rnor_5.01220,239,829 - 20,239,932NCBI
Rnor_5.01205,564,366 - 205,564,501NCBI
Rnor_5.01220,239,828 - 20,239,932NCBI
Rnor_5.01205,564,367 - 205,564,501NCBI
RGSC_v3.41186,388,833 - 186,388,966UniSTS
RGSC_v3.41216,601,685 - 16,601,788RGD
RGSC_v3.41186,388,832 - 186,388,966RGD
RGSC_v3.41216,601,686 - 16,601,788UniSTS
RGSC_v3.11186,538,713 - 186,538,847RGD
Celera1217,843,923 - 17,844,025UniSTS
Celera1179,400,694 - 179,400,827UniSTS
RH 3.4 Map12241.0UniSTS
Cytogenetic Map1q36UniSTS
Flank 2: (D12Mit1)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21215,024,942 - 15,025,183 (+)MAPPER
Rnor_6.01217,114,521 - 17,114,770NCBI
Rnor_5.01219,102,125 - 19,102,374UniSTS
RGSC_v3.41215,508,578 - 15,508,819RGD
RGSC_v3.41215,508,579 - 15,508,819UniSTS
RGSC_v3.11215,538,438 - 15,538,810RGD
Celera1216,781,905 - 16,782,145UniSTS
Cytogenetic Map12 RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
631560Apr1Acute phase response QTL 16.1orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)121914436246669029Rat
61443Btemp2Thermal response to stress QTL 23.30.000094body temperature trait (VT:0005535)core body temperature (CMO:0001036)121502518320794014Rat
8552964Pigfal17Plasma insulin-like growth factor 1 level QTL 173.5blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
61324Eae5Experimental allergic encephalomyelitis QTL 514nervous system integrity trait (VT:0010566)percentage of study population developing relapsing-remitting experimental autoimmune encephalomyelitis during a period of time (CMO:0001402)121961087046669029Rat
9590147Scort7Serum corticosterone level QTL 713.610.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)12142110980Rat
1549829Scl48Serum cholesterol level QTL 485blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)12960327746669029Rat
61331Eau2Experimental allergic uveoretinitis QTL 20.0005uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)12852542328064601Rat
737822Alc10Alcohol consumption QTL 102.2consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)121961087040218516Rat
2293684Bmd26Bone mineral density QTL 264.40.0002femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)121587265332974238Rat
6893681Bw109Body weight QTL 1092.30.004body mass (VT:0001259)body weight (CMO:0000012)12123297788Rat
1302792Scl21Serum cholesterol level QTL 213.80.0011blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)12719673046669029Rat
1598855Bp294Blood pressure QTL 2943.5arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)12134851688Rat
1600391Edcs2Endometrial carcinoma susceptibility QTL23.50.01uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)12683319017870186Rat
10755457Coatc14Coat color QTL 140.01759coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)12122591684Rat
1331761Bp218Blood pressure QTL 2182.973arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121107382545055165Rat
8694179Bw150Body weight QTL 1502.90.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
7411545Bw128Body weight QTL 1285.20.001body mass (VT:0001259)body weight gain (CMO:0000420)12142110980Rat
7411547Bw129Body weight QTL 1290.001body mass (VT:0001259)body weight gain (CMO:0000420)6556449546669029Rat
1300157Rf21Renal function QTL 214.4renal blood flow trait (VT:2000006)absolute change in renal blood flow rate (CMO:0001168)12931821632103380Rat
737979Pia22Pristane induced arthritis QTL 2253.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)12144465750Rat
1298081Cia25Collagen induced arthritis QTL 254.7joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121961088935682913Rat
2300186Bmd59Bone mineral density QTL 597.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)121047413746669029Rat
7411660Foco28Food consumption QTL 2810.90.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
1331755Bp219Blood pressure QTL 2193.041arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121107382528064557Rat
2312418Kidm41Kidney mass QTL 413.70.0001kidney mass (VT:0002707)single kidney wet weight to body weight ratio (CMO:0000622)12119611090Rat
70213Niddm27Non-insulin dependent diabetes mellitus QTL 273.72blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121983578938193007Rat
2306789Ean6Experimental allergic neuritis QTL 64.9nervous system integrity trait (VT:0010566)experimental autoimmune neuritis severity score (CMO:0001528)121961087024139202Rat
7411641Foco19Food consumption QTL 1927.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
7411643Foco20Food consumption QTL 200.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)122032881946669029Rat
5684888Pia42Pristane induced arthritis QTL 42joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121961087042828880Rat
1549912Bp268Blood pressure QTL 268arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)101318273646669029Rat
2302060Pia37Pristane induced arthritis QTL 376.10.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)121319815746669029Rat
1641928Alcrsp5Alcohol response QTL 5response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)121281238546669029Rat
8552912Pigfal6Plasma insulin-like growth factor 1 level QTL 65blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449846669029Rat
10059594Kidm46Kidney mass QTL 463.790.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)12610757946669029Rat
1581516Cm56Cardiac mass QTL 564.20.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)12129333307Rat
9590086Insglur6Insulin/glucose ratio QTL 618.970.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)12142110980Rat
8552918Pigfal7Plasma insulin-like growth factor 1 level QTL 7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)12556449546669029Rat
1549902Bp269Blood pressure QTL 269arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)121318273646669029Rat
61404Bw120Body weight QTL 1205.1body mass (VT:0001259)body mass index (BMI) (CMO:0000105)121235161946669029Rat
1331786Kidm11Kidney mass QTL 113.571kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)121107382524234895Rat
2293699Bss49Bone structure and strength QTL 495.610.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)121047413746669029Rat
634351Apr5Acute phase response QTL 56.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)12144503507Rat
634350Apr4Acute phase response QTL 46orosomucoid 1 amount (VT:0010541)plasma orosomucoid 1 level (CMO:0001467)12117200546172005Rat
61416Pia4Pristane induced arthritis QTL 48.4joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)121363552330827399Rat
631521Pia12Pristane induced arthritis QTL 128.9joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)122025941723672083Rat
7204484Bp358Blood pressure QTL 3580.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)121300829619212979Rat
61421Cia12Collagen induced arthritis QTL 124.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)121363552335682913Rat
2303569Gluco44Glucose level QTL 442blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)121281238546669029Rat
7411586Foco5Food consumption QTL 55.40.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
2303575Insul14Insulin level QTL 144blood insulin amount (VT:0001560)blood insulin level (CMO:0000349)12142450532Rat
7411588Foco6Food consumption QTL 60.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
2302042Pia38Pristane induced arthritis QTL 383.50.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G1 level (CMO:0002115)12144503507Rat
7411595Foco9Food consumption QTL 940.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12142110980Rat
7411597Foco10Food consumption QTL 100.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)12556449546669029Rat
2293086Iddm30Insulin dependent diabetes mellitus QTL 303.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)12844949028302290Rat
631543Bp83Blood pressure QTL 835.8arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)121555082638478808Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Btemp2


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-04-14 Btemp2  Thermal response to stress QTL 2  Trs2    Symbol updated 1299863 APPROVED

RGD Curation Notes
Note Type Note Reference
qtl_gene Hspb1 may play a role in regulation of body temperature to stress 61094
qtl_general additively associates with the increase of body temperature during immobilization stress; homologous to the human Chr 7q21-22 region 61094
qtl_general the Y chromosome of SHR origin promotes body temperature response 61094