Cia19 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Cia19 (Collagen induced arthritis QTL 19) Rattus norvegicus

Symbol: Cia19
Name: Collagen induced arthritis QTL 19
RGD ID: 61431
Previously known as: Type II Collagen induced arthritis QTL 19
Trait: joint integrity trait   (VT:0010548)    
Measurement Type: joint inflammation composite score   (CMO:0000919)    
LOD Score: 4.4
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2X65,612,192 - 120,568,734RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0X70,352,120 - 127,888,215RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0X71,224,072 - 127,983,061RGDRnor5.0
RGSC_v3.4X1 - 88,514,313RGDRGSC3.4
RGSC_v3.1X0 - 88,587,746RGD
Cross Type: F2
Strains Crossed: BBDR/Rhw BN 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
BBDR/Rhw  (IEA)
BN  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Genetic dissection of a rat model for rheumatoid arthritis: significant gender influences on autosomal modifier loci Furuya T, etal., Hum Mol Genet 2000 Sep 22;9(15):2241-50
2. Quest for arthritis-causative genetic factors in the rat. Joe B Physiol Genomics. 2006 Oct 3;27(1):1-11. Epub 2006 Jun 27.
3. The complexity in hunting for candidate genes within QTL that determine susceptibility to arthritis in rats. Xiong Q, etal., Crit Rev Immunol. 2008;28(2):127-57.
4. Genetic and molecular basis of quantitative trait loci of arthritis in rat: genes and polymorphisms. Xiong Q, etal., J Immunol. 2008 Jul 15;181(2):859-64.
Related QTLs

Related QTL Description Reference
Cia18 maps to same region RGD:61067


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1596935Dgat2l6diacylglycerol O-acyltransferase 2-like 6X6561443065637962Rat
1587163Awat1acyl-CoA wax alcohol acyltransferase 1X6566820565674450Rat
61798P2ry4pyrimidinergic receptor P2Y4X6568168065717404Rat
621385Arr3arrestin 3X6569988165712224Rat
1560007Pdzd11PDZ domain containing 11X6571868965721742Rat
620526Kif4akinesin family member 4AX6572174665824277Rat
41167944LOC120099344uncharacterized LOC120099344X6572338565731622Rat
11416999Trnaf-gaa8transfer RNA phenylalanine (anticodon GAA) 8X6581914665819219Rat
1560780Gdpd2glycerophosphodiester phosphodiesterase domain containing 2X6582627365835361Rat
68423Dlg3discs large MAGUK scaffold protein 3X6585965365911887Rat
1560239Tex11testis expressed 11X6593290466196525Rat
41188692Sgcb-ps1sarcoglycan, beta, pseudogene 1X6607940066080144Rat
41108114LOC120099433U7 small nuclear RNAX6610789966107960Rat
41192929LOC120099438U7 small nuclear RNAX6610797366108040Rat
41379055LOC120099394U6 spliceosomal RNAX6611205666112162Rat
2318376Gatc-ps1glutamyl-tRNA amidotransferase subunit C, pseudogene 1X6617823866178820Rat
68342Slc7a3solute carrier family 7 member 3X6621007166216482Rat
1565585Snx12sorting nexin 12X6622699566356945Rat
41146375Rps2-ps24ribosomal protein S2, pseudogene 24X6627322266274839Rat
41337432LOC120099440small nucleolar RNA SNORA72X6627820966278328Rat
7640555LOC102548326uncharacterized LOC102548326X6635708966372019Rat
1561201Foxo4forkhead box O4X6638524166392115Rat
9078783Cxhxorf65similar to human chromosome X open reading frame 65X6639251466395181Rat
621466Il2rginterleukin 2 receptor subunit gammaX6639533066399026Rat
1585896Med12mediator complex subunit 12X6640480766427775Rat
621119Nlgn3neuroligin 3X6642792666457378Rat
61926Gjb1gap junction protein, beta 1X6650184866509783Rat
1564967Zmym3zinc finger MYM-type containing 3X6652858566544234Rat
1549738Nononon-POU domain containing, octamer-bindingX6655413166571992Rat
1565015Itgb1bp2integrin subunit beta 1 binding protein 2X6657253766577174Rat
41120086LOC120099453small nucleolar RNA SNORA4X6657595266576115Rat
1562050Taf1TATA-box binding protein associated factor 1X6664091566716543Rat
41126328LOC120099518small nucleolar RNA SNORA26X6667162766671751Rat
62060OgtO-linked N-acetylglucosamine (GlcNAc) transferaseX6677127866816148Rat
9094000Rpl35al4ribosomal protein L35A like 4X6680662666807086Rat
7634291LOC102548506retinitis pigmentosa 1-like 1 protein-likeX6681628766833288Rat
621528Cxcr3C-X-C motif chemokine receptor 3X6684431866846969Rat
41052835Rps19-ps16ribosomal protein S19, pseudogene 16X6687877666879180Rat
7751972Cxhxorf49Bsimilar to human chromosome X open reading frame 49BX6690738366911249Rat
2320498Cxhxorf49similar to human chromosome X open reading frame 49X6691143066915407Rat
7628812Cxhxorf49l1similar to human chromosome X open reading frame 49 like 1X6693617666939844Rat
1564117Nhsl2NHS-like 2X6696995367209464Rat
6490575Rtl5retrotransposon Gag like 5X6718394867188747Rat
1590326Pin4peptidylprolyl cis/trans isomerase, NIMA-interacting 4X6723206667238709Rat
1565734Ercc6lERCC excision repair 6 like, spindle assembly checkpoint helicaseX6724541467261222Rat
1583602Snrpd2-ps2small nuclear ribonucleoprotein D2 polypeptide, pseudogene 2X6728364267284115Rat
2324318Rps4xribosomal protein S4, X-linkedX6729852267302965Rat
41211256LOC120099193uncharacterized LOC120099193X6730302267331009Rat
620781Cited1Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1X6735037667355072Rat
1562895Hdac8histone deacetylase 8X6738528867593014Rat
621522Phka1phosphorylase kinase regulatory subunit alpha 1X6760130267738504Rat
1598110Klhdc2l1kelch domain containing 2 like 1X6767248767674006Rat
9854661Rps27a-ps3ribosomal protein S27a, pseudogene 3X6768020767680750Rat
1598072Nsa2-ps16NSA2 ribosome biogenesis factor, pseudogene 16X6781458467816177Rat
11451771Dmrtc1aDMRT-like family C1aX6782218767852572Rat
1596863Spin1-ps2spindlin 1, pseudogene 2X6787546767876251Rat
40943762LOC120099304doublesex- and mab-3-related transcription factor C1-likeX6788314367890376Rat
1359563Dmrtc1c1DMRT-like family C1c1X6789697367904182Rat
41323199Spin1-ps4spindlin 1, pseudogene 4X6791107667911860Rat
1596820Dmrtc1bDMRT-like family C1bX6792823067963026Rat
1564177Fam236dfamily with sequence similarity 236 member DX6793818167938945Rat
1566061Rps7-ps21ribosomal protein S7, pseudogene 21X6800766768008347Rat
1566367Pabpc1l2apoly(A) binding protein, cytoplasmic 1-like 2AX6802384568026508Rat
6493448Nsa2-ps21NSA2 ribosome biogenesis factor, pseudogene 21X6815183068152627Rat
1583763Dmap1-ps5DNA methyltransferase 1-associated protein 1, pseudogene 5X6816378768165286Rat
1563260Nap1l2nucleosome assembly protein 1-like 2X6817405168176449Rat
15625214930519F16RiklRIKEN cDNA 4930519F16 gene likeX6818751768220029Rat
9380713LOC10369086660S ribosomal protein L18a pseudogeneX6819485768195560Rat
2319702Higd1al1HIG1 hypoxia inducible domain family, member 1A like 1X6822873368229275Rat
41036582LOC120099471small nucleolar RNA SNORA48X6825074968250888Rat
41192693LOC120099468small nucleolar RNA SNORA48X6826092968261072Rat
41020943Ergic2-ps1ERGIC and golgi 2, pseudogene 1X6829594468298069Rat
40926921LOC120099538U2 spliceosomal RNAX6832126768321349Rat
1561529Cdx4caudal type homeo box 4X6832687468335461Rat
2319518Rps26l6ribosomal protein S26 like 6X6835031268350725Rat
1589722Chic1cysteine-rich hydrophobic domain 1X6836201468406155Rat
3914Tsxtestis specific X-linked geneX6842666868437887Rat
41360383LOC120099412U6 spliceosomal RNAX6845638868456492Rat
6492187XistX inactive specific transcriptX6847498768492500Rat
7726681JpxJPX transcript, XIST activatorX6851149168665132Rat
1583762Hrasl1HRas proto-oncogene, GTPase like 1X6852172668522872Rat
1564124FtxFTX transcript, XIST regulatorX6858834968630338Rat
2325538Mir421microRNA 421X6859157668591654Rat
2325517Mir374bmicroRNA 374bX6859173268591799Rat
1589760Zcchc13zinc finger CCHC-type containing 13X6864356868644671Rat
1589761Slc25a38-ps1solute carrier family 25, member 38, pseudogene 1X6868057868681595Rat
11427362LOC10834913340S ribosomal protein S2 pseudogeneX6869355568702580Rat
7715669Rita1l1RBPJ interacting and tubulin associated 1 like 1X6870399668704958Rat
628608Slc16a2solute carrier family 16 member 2X6872536568848572Rat
1592976Rpl38l3ribosomal protein L38 like 3X6896960768969819Rat
1559832Rlimring finger protein, LIM domain interactingX6898325969004368Rat
9286705Snrpg-ps8small nuclear ribonucleoprotein polypeptide G, pseudogene 8X6901583369016175Rat
41137640LOC120099400U6 spliceosomal RNAX6902397269024078Rat
41186810LOC120099539U2 spliceosomal RNAX6903737869037533Rat
1598318Sf3a2-ps2splicing factor 3A subunit 2, pseudogene 2X6907717569078407Rat
40970614LOC120099484small nucleolar RNA SNORA17X6908148369081618Rat
1561931Nexmifneurite extension and migration factorX6908807669219253Rat
2325441Mir672microRNA 672X6912659869126677Rat
1303086Abcb7ATP binding cassette subfamily B member 7X6929559869436775Rat
1564806Uprturacil phosphoribosyltransferase homologX6951657369546811Rat
1562075Zdhhc15zinc finger DHHC-type palmitoyltransferase 15X6956808669701756Rat
4888600Mir3559microRNA 3559X6959443369594547Rat
41207347LOC120099425U1 spliceosomal RNAX6966227369662436Rat
7570701LOC102555916uncharacterized LOC102555916X6970114569753381Rat
1594342Kpna1-ps10karyopherin subunit alpha 1, pseudogene 10X6988507769887095Rat
1564872Magee2MAGE family member E2X6988575169944824Rat
41329706Sfr1-ps2SWI5-dependent homologous recombination repair protein 1, pseudogene 2X7011728870119516Rat
6485055LOC100912991uncharacterized LOC100912991X7012190870154412Rat
1562502Pbdc1polysaccharide biosynthesis domain containing 1X7015410670197827Rat
1560259Magee1MAGE family member E1X7018924270192789Rat
41026980Rpl19-ps22ribosomal protein L19, pseudogene 22X7019848670199048Rat
9341032LOC103690877trafficking protein particle complex subunit 13-likeX7021953770220301Rat
41037235LOC120099555U6 spliceosomal RNAX7032468470324790Rat
1590568Cct3-ps3chaperonin containing Tcp1, subunit 3 (gamma), pseudogene 3X7039319370395030Rat
9462670LOC103690870uncharacterized LOC103690870X7041795170468666Rat
2325502Mir384microRNA 384X7042529370425375Rat
2325624Mir325microRNA 325X7045791870458015Rat
1563232Hmgb4l10high-mobility group box 4 like 10X7056275370563428Rat
1560099Rpl19-ps25ribosomal protein L19, pseudogene 25X7057177570572469Rat
41378198LOC120099473small nucleolar RNA SNORA48X7064314270643289Rat
2318509Mapk3-ps2mitogen activated protein kinase 3, pseudogene 2X7077414570778015Rat
1586007Gapdh-ps6Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 6X7080159670802598Rat
71052Fgf16fibroblast growth factor 16X7081665870828028Rat
41367748Trnag-acc8transfer RNA glycine (anticodon ACC) 8X7082386270823941Rat
619795AtrxATRX, chromatin remodelerX7085098170997330Rat
41006369LOC120099513U2 spliceosomal RNAX7087567970875863Rat
1591974Gpbp1l1-ps1GC-rich promoter binding protein 1, pseudogene 1X7101560471017146Rat
620094Magt1magnesium transporter 1X7103848971079704Rat
727789Cox7bcytochrome c oxidase subunit 7BX7108348671089733Rat
2179Atp7aATPase copper transporting alphaX7109414471201550Rat
1562655Tlr13toll-like receptor 13X7122028871241899Rat
1587069Rpl19-ps17ribosomal protein L19, pseudogene 17X7126690971267617Rat
619878Pgk1phosphoglycerate kinase 1X7127145471287429Rat
621116Taf9bTATA-box binding protein associated factor 9bX7128929071300142Rat
2323689LOC10035950540S ribosomal protein S21-likeX7130409871304447Rat
41238383LOC120099143fibronectin type III domain containing protein 3C1-likeX7132390771349551Rat
40938697Hmgb1-ps34high mobility group box 1, pseudogene 34X7136353171364791Rat
41114929LOC120099144fibronectin type III domain containing protein 3C1-likeX7144842071472221Rat
1563846Fndc3c1fibronectin type III domain containing 3C1X7148937471547160Rat
1594341Rpl7-ps30ribosomal protein L7, pseudogene 30X7160682271607409Rat
1586006Lgals8-ps1galectin 8, pseudogene 1X7164518071651273Rat
619796Cysltr1cysteinyl leukotriene receptor 1X7166142171690012Rat
41192127LOC120099436U1 spliceosomal RNAX7167386171674022Rat
2324606LOC100359656rCG38062-likeX7180107571802621Rat
2324103Snrpn-ps1small nuclear ribonucleoprotein polypeptide N, pseudogene 1X7184794771848662Rat
1560821Rpl24l1ribosomal protein L24 like 1X7188023671880917Rat
1564805Rtl3retrotransposon Gag like 3X7194734371951008Rat
2323925Selenok-ps6selenoprotein K, pseudogene 6X7197354671974230Rat
41319403LOC120099398U6 spliceosomal RNAX7200792072008024Rat
1563686Lpar4lysophosphatidic acid receptor 4X7203348672046978Rat
1561912P2ry10P2Y receptor family member 10X7212155872207174Rat
41350805LOC120099416U6 spliceosomal RNAX7220232972202422Rat
1560455P2ry10bP2Y receptor family member 10BX7225552672281013Rat
6500693Phb1-ps3prohibitin 1, pseudogene 3X7228168872282660Rat
1564689Gpr174G protein-coupled receptor 174X7235545272396146Rat
41266402Eno1-ps29enolase 1, pseudogene 29X7237686872378025Rat
1559423Itm2aintegral membrane protein 2AX7248638372492344Rat
1589763Phb1-ps10prohibitin 1, pseudogene 10X7256517772566142Rat
1593243Nsa2-ps17NSA2 ribosome biogenesis factor, pseudogene 17X7267164172672496Rat
1589764Tbx22T-box transcription factor 22X7272361972774647Rat
1583582Foxn2-ps1forkhead box N2, pseudogene 1X7273839772739451Rat
1566265Chmp1b2charged multivesicular body protein 1B2X7286040972901232Rat
1559589Tent5dterminal nucleotidyltransferase 5DX7290128772974562Rat
1561552WasflWASP family member 1 likeX7304098473043716Rat
1563242Rfk-ps1riboflavin kinase, pseudogene 1X7345721973459275Rat
41157174LOC120099145uncharacterized protein DKFZp434B061-likeX7349866873506536Rat
1562871Pcgf6l1polycomb group RING finger protein 6 like 1X7350649573507638Rat
9098358LOC103690878syntaxin-3-likeX7369521573696108Rat
1584865Ppid-ps17peptidylprolyl isomerase D, pseudogene 17X7374598073749009Rat
1559445Brwd3bromodomain and WD repeat domain containing 3X7376834373861643Rat
6497694Hmgn5high mobility group nucleosome binding domain 5X7408587174094488Rat
41058279LOC120099401U6 spliceosomal RNAX7410304374103149Rat
1560520Sh3bgrl1SH3 domain binding glutamate rich protein like 1X7416702974263783Rat
1562039Sh3bgrl4SH3 domain binding glutamate-rich protein like 4X7429287574307793Rat
1596765LOC681325hypothetical protein LOC681325X7431269874316311Rat
7568867LOC102554698uncharacterized LOC102554698X7437797374430612Rat
41039055Tmed2-ps2transmembrane p24 trafficking protein 2, pseudogene 2X7452985574530417Rat
2323375Mtrfr-ps2mitochondrial translation release factor in rescue, pseudogene 2X7458529274585827Rat
7524128LOC102554937transmembrane protein 182-likeX7463256474699574Rat
1594339Phb1-ps15prohibitin 1, pseudogene 15X7483973474841509Rat
1583760Ldha-ps6lactate dehydrogenase A, pseudogene 6X7522910475230103Rat
41263292LOC120099373uncharacterized LOC120099373X7530711075308918Rat
1596697Kif18b-ps1kinesin family member 18B, pseudogene 1X7539517375396382Rat
41332437LOC120099256uncharacterized LOC120099256X7554148075552645Rat
1595418Rps2-ps23ribosomal protein S2, pseudogene 23X7554917875549883Rat
7527839LOC102555876uncharacterized LOC102555876X7561656275622421Rat
41140442LOC120099393U6 spliceosomal RNAX7564397475644077Rat
61947Pou3f4POU class 3 homeobox 4X7585864675859923Rat
41148923Ankra2l1ankyrin repeat family A member 2 like 1X7593952375941582Rat
2323810Cylc1cylicin 1X7610811176197431Rat
1584368Tpm3-ps3tropomyosin 3, pseudogene 3X7618523376189109Rat
11481675Trnar-ccu9transfer RNA arginine (anticodon CCU) 9X7634360476343676Rat
1560817Rps6ka6ribosomal protein S6 kinase A6X7635331676454502Rat
1563666Hdxhighly divergent homeoboxX7655253976697177Rat
40967030Cwc22-ps2CWC22 spliceosome associated protein homolog, pseudogene 2X7655698276559633Rat
9177544Srsf10-ps1serine and arginine rich splicing factor 10, pseudogene 1X7688550476894659Rat
2321964Tex16testis expressed gene 16X7694882377316809Rat
2323338Ube2d4l1ubiquitin-conjugating enzyme E2D 4 like 1X7727835477279285Rat
1549725Apoolapolipoprotein O-likeX7737772377443672Rat
1565932Satl1spermidine/spermine N1-acetyl transferase-like 1X7745335777469100Rat
6490707Eef1a1-ps18eukaryotic translation elongation factor 1 alpha 1, pseudogene 18X7751305377514314Rat
15619582010106E10RiklRIKEN cDNA 2010106E10 gene likeX7753334477597156Rat
1562768Zfp711zinc finger protein 711X7764630077679398Rat
1560798Pof1bPOF1B, actin binding proteinX7768312877749827Rat
1597720Rfc4-ps1replication factor C subunit 4, pseudogene 1X7774965177813367Rat
1583758Ldha-ps7lactate dehydrogenase A, pseudogene 7X7798593177986946Rat
76292684932431L22RiklRIKEN cDNA 4932431L22 gene likeX7801815978068777Rat
2322911Tubg1-ps1tubulin, gamma 1, pseudogene 1X7819498878233579Rat
2340ChmCHM Rab escort proteinX7820320078361996Rat
2325532Mir361microRNA 361X7824620678246275Rat
41114019LOC120099532U2 spliceosomal RNAX7828899878289171Rat
41387253LOC120099548U4 spliceosomal RNAX7843317578433322Rat
40952035LOC120099451small nucleolar RNA SNORA31X7865198978652118Rat
1561687Dach2dachshund family transcription factor 2X7871896379018023Rat
41092676LOC120099283uncharacterized LOC120099283X7903292179063019Rat
41307397LOC120099511small nucleolar RNA SNORA17X7907512079075243Rat
1596455G3bp1-ps6G3BP stress granule assembly factor 1, pseudogene 6X7917813679192120Rat
1565441Klhl4kelch-like family member 4X7942919379719482Rat
1596429Ivns1abp-ps2influenza virus NS1A binding protein, pseudogene 2X7982979679831682Rat
1561582Tusc2l1tumor suppressor 2, mitochondrial calcium regulator like 1X7994528779946890Rat
41199544LOC120099227ubiquitin-conjugating enzyme E2 D4-likeX8004879280049692Rat
2322525Gmeb1-ps1glucocorticoid modulatory element binding protein 1, pseudogene 1X8012458480125689Rat
1334134Or6b14-ps1olfactory receptor family 6 subfamily B member 14, pseudogene 1X8015641080156966Rat
1597164Gli2-ps1GLI family zinc finger 2, pseudogene 1X8027241480278678Rat
41391884LOC120099299uncharacterized LOC120099299X8032056680325582Rat
41102911LOC120099409U6 spliceosomal RNAX8086248980862595Rat
6486105Actb-ps1actin, beta, pseudogene 1X8096709581106101Rat
2321933Yipf4-ps1Yip1 domain family, member 4, pseudogene 1X8137062181380591Rat
1595060Gemin8-ps5gem (nuclear organelle) associated protein 8, pseudogene 5X8138915081390246Rat
41248886LOC120099541U2 spliceosomal RNAX8164846881648535Rat
2321886Cpxcr1CPX chromosome region, candidate 1X8175690981794661Rat
40940844Snrk-ps2SNF related kinase, pseudogene 2X8195026781954558Rat
41276463M6pr-ps1mannose-6-phosphate receptor, cation dependent, pseudogene 1X8212916882131403Rat
2321540Vkorc1l1-ps1vitamin K epoxide reductase complex, subunit 1-like 1, pseudogene 1X8214605882146443Rat
1561666H2ab3H2A.B variant histone 3X8236253182363105Rat
11409359LOC108349139ferritin light chain 1 pseudogeneX8239819382408875Rat
1584982Hsp90ab1-ps7heat shock protein 90 alpha family class B member 1, pseudogene 7X8247510982477258Rat
1591601Hmgb4l3high-mobility group box 4 like 3X8261195982612568Rat
1583755Ldhb-ps1lactate dehydrogenase B, pseudogene 1X8286236982863633Rat
6501589Hsp90b1-ps1heat shock protein 90 beta family member 1, pseudogene 1X8318714783190538Rat
11379849Pskh1-ps1protein serine kinase H1, pseudogene 1X8328108483281644Rat
1592556Hmgb1-ps29high-mobility group box 1, pseudogene 29X8372857083729438Rat
41012878LOC120099509small nucleolar RNA SNORA17X8390802883908132Rat
1561826Tgif2lx2TGFB-induced factor homeobox 2-like, X-linked 2X8410920384110264Rat
1591514Cactin-ps4cactin, spliceosome C complex subunit, pseudogene 4X8434539884347641Rat
9439993Aldoa-ps8aldolase, fructose-bisphosphate A, pseudogene 8X8435963784363266Rat
1591359Tpx2-ps1TPX2, microtubule nucleation factor, pseudogene 1X8517415085177402Rat
9310051Atp5f1e-ps1ATP synthase F1 subunit epsilon, pseudogene 1X8550336985503521Rat
1587661Pabpc5poly A binding protein, cytoplasmic 5X8563776385641235Rat
1583754Pes1-ps2pescadillo ribosomal biogenesis factor 1, pseudogene 2X8582197085823704Rat
11460839LOC108349181glyceraldehyde-3-phosphate dehydrogenase pseudogeneX8598628785987475Rat
11360244LOC108349237uncharacterized LOC108349237X8604740386058270Rat
1562864Pcdh11xprotocadherin 11 X-linkedX8605834886751078Rat
2320944VentxVENT homeoboxX8648389386484900Rat
41096957LOC120099419U6 spliceosomal RNAX8659978286599884Rat
11393209LOC10834918260 kDa heat shock protein, mitochondrial pseudogeneX8683518186836288Rat
41323624Rpl27-ps9ribosomal protein L27, pseudogene 9X8685312386853502Rat
1590192Isg20l3interferon stimulated exonuclease gene 20 like 3X8693218186933542Rat
1583753Zc3h11a-ps1zinc finger CCCH-type containing 11A, pseudogene 1X8725441287309403Rat
41021389Tpi1-ps3triosephosphate isomerase 1, pseudogene 3X8737596087449532Rat
1589048Cct5-ps1chaperonin containing TCP1 subunit 5, pseudogene 1X8756220687563474Rat
41222918LOC120099392U6 spliceosomal RNAX8764108887641196Rat
41165605Sgms1-ps1sphingomyelin synthase 1, pseudogene 1X8786305087876463Rat
41318060Kansl2-ps2KAT8 regulatory NSL complex subunit 2, pseudogene 2X8791810587921009Rat
620990Nap1l3nucleosome assembly protein 1-like 3X8834759588350393Rat
41314102LOC120099435U7 small nuclear RNAX8860912688609184Rat
7559699LOC102555573josephin-1-likeX8887692288878210Rat
41141688LOC120099545small nucleolar RNA U3X8899195888992172Rat
41075961Egln1-ps4egl-9 family hypoxia-inducible factor 1, pseudogene 4X8943511689442460Rat
1559460Dmtf1lcyclin D binding myb like transcription factor 1X8950231289511983Rat
41337962LOC120099506small nucleolar RNA SNORA17X8957083089570959Rat
1562485Hdlbpl1high density lipoprotein binding protein like 1X8957366189583547Rat
1563104Hdlbpl2high density lipoprotein binding protein like 2X8962870589650241Rat
1561151Dmtf1l2cyclin D binding myb like transcription factor 1 like 2X8973771589781873Rat
7599539LOC102555852E3 ubiquitin-protein ligase RING2-likeX8983804789869276Rat
1583752Smarce1-ps4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, pseudogene 4X9006726890070351Rat
2320143Cldn34c4claudin 34C4X9012972490135400Rat
41068559Aimp1-ps5aminoacyl tRNA synthetase complex-interacting multifunctional protein 1, pseudogene 5X9038812490389081Rat
41153418LOC120099454small nucleolar RNA SNORA44X9084139090841501Rat
1562219Rbm31yRNA binding motif 31, Y-linkedX9090430790906267Rat
41000055LOC120099405U6 spliceosomal RNAX9153921191539317Rat
41172807LOC120099486small nucleolar RNA SNORA17X9171808291718212Rat
1565129Pramel34lPRAME like 34 likeX9203676692038211Rat
1561318Kmt5al2lysine methyltransferase 5A like 2X9217834492180517Rat
1583751Ldha-ps8lactate dehydrogenase A, pseudogene 8X9222156592222583Rat
1588872Rpl31l1ribosomal protein L31-like 1X9230108992302388Rat
1564399Diaph2diaphanous-related formin 2X9239518993234521Rat
41098979Rpa4l-ps1replication protein A4 like, pseudogene 1X9257774092579234Rat
41219408LOC120099313high mobility group protein B4-likeX9292327892923784Rat
2320731Snrpg-ps7small nuclear ribonucleoprotein polypeptide G, pseudogene 7X9329375893293987Rat
41226649LOC120099279elongin-C-likeX9334176093342187Rat
7668172Envl-ps6MLV-related proviral Env polyprotein-like, pseudogene 6X9342680893428804Rat
41290160LOC120099490small nucleolar RNA SNORA17X9374025993740389Rat
40997937LOC120099432U7 small nuclear RNAX9399593593995996Rat
1587678Rpsa-ps23ribosomal protein SA, pseudogene 23X9447920894488070Rat
41102901Mtap-ps1methylthioadenosine phosphorylase, pseudogene 1X9455035094551241Rat
1583351Add1-ps1adducin 1, pseudogene 1X9506066595096671Rat
1587640Aldoa-ps7aldolase, fructose-bisphosphate A, pseudogene 7X9515543295156523Rat
40956042LOC120099505small nucleolar RNA SNORA17X9561579295615915Rat
40955172LOC120099500small nucleolar RNA SNORA17X9567183995671970Rat
9854646Rps27a-ps4ribosomal protein S27a, pseudogene 4X9663504796635627Rat
1586436Hsp90ab1-ps11heat shock protein 90 alpha family class B member 1, pseudogene 11X9670810696710139Rat
1565392Pcdh19protocadherin 19X9676768696873477Rat
41390138LOC120099559U6 spliceosomal RNAX9705592197056028Rat
620938TnmdtenomodulinX9705713797072634Rat
1560160Tspan6tetraspanin 6X9709239497099659Rat
1562444Srpx2sushi-repeat-containing protein, X-linked 2X9710645597132197Rat
620204Sytl4synaptotagmin-like 4X9713549697185867Rat
1596566Cstf2cleavage stimulation factor subunit 2X9725355997279476Rat
620598Nox1NADPH oxidase 1X9727905897332291Rat
6499811LOC10091018060S ribosomal protein L36a-likeX9730261497302943Rat
1359223XkrxXK related, X-linkedX9734115897353175Rat
1562947Arl13aARF like GTPase 13AX9738037097406704Rat
1565132Trmt2btRNA methyltransferase 2 homolog BX9742571297483821Rat
1303093Tmem35atransmembrane protein 35AX9750335097514198Rat
2631Cenpicentromere protein IX9751591997567671Rat
621750Drp2dystrophin related protein 2X9760757797658117Rat
1564898Taf7lTATA-box binding protein associated factor 7-likeX9766022297675241Rat
41053489LOC120099422U6 spliceosomal RNAX9769232997692431Rat
621801Timm8a1translocase of inner mitochondrial membrane 8A1X9771793297722170Rat
41231029Trnad-auc1transfer RNA aspartic acid (anticodon AUC) 1X9771998797720067Rat
1359683BtkBruton tyrosine kinaseX9772279697762315Rat
1306640Rpl36aribosomal protein L36AX9776617997768892Rat
1589721Glagalactosidase, alphaX9776922797780646Rat
1549784Hnrnph2heterogeneous nuclear ribonucleoprotein H2X9778089097786846Rat
7536858Cox7b-ps2cytochrome c oxidase subunit 7B, pseudogene 2X9779533897812718Rat
2325053Armcx4armadillo repeat containing, X-linked 4X9786052697870912Rat
41314230Rps29-ps8ribosomal protein S29, pseudogene 8X9789357797893859Rat
1561629Armcx1armadillo repeat containing, X-linked 1X9789896997902874Rat
41255370LOC120099156protein ARMCX6-likeX9790971297911823Rat
1359303Armcx6armadillo repeat containing, X-linked 6X9792903297932031Rat
1549739Armcx3armadillo repeat containing, X-linked 3X9793711597942098Rat
1359132Armcx2armadillo repeat containing, X-linked 2X9798066297985523Rat
1584778Cfl1-ps2cofilin 1, pseudogene 2X9798794697988445Rat
41069800LOC120099457small nucleolar RNA SNORA42/SNORA80 familyX9801215798012273Rat
1564480RGD1564480similar to polyamine oxidase isoform 2X9801435598016514Rat
1598253Cdca7l-ps3cell division cycle associated 7 like, pseudogene 3X9806867698070059Rat
41290015LOC120099456small nucleolar RNA SNORA42/SNORA80 familyX9809551498095635Rat
1559530Nxf2nuclear RNA export factor 2X9813595398157117Rat
1565344Zmat1zinc finger, matrin-type 1X9816838898199415Rat
11441414Rpl27a-ps1ribosomal protein L27a, pseudogene 1X9818488898185372Rat
41036329Rpl18-ps16ribosomal protein L18, pseudogene 16X9820098198206496Rat
1598096Tceal6transcription elongation factor A like 6X9833760698339539Rat
1566159Pramex2PRAME like, X-linked 2X9838386498391159Rat
1564595Pramel3preferentially expressed antigen in melanoma-like 3X9841136998423713Rat
41022846LOC120099508small nucleolar RNA SNORA17X9842636198426479Rat
1561307Pramelpreferentially expressed antigen in melanoma-likeX9845119998486998Rat
1566170Nxf7nuclear RNA export factor 7X9853537498552562Rat
1596887Pramex1PRAME like, X-linked 1X9856799498574654Rat
1598081Tcp11x2t-complex 11 family, X-linked 2X9859119198640800Rat
2321752Cbx1-ps1chromobox 1, pseudogene 1X9866074598661862Rat
2324583Tmsb15athymosin beta 15aX9867158998673566Rat
1596862Nxf5nuclear RNA export factor 5X9867625998698739Rat
7586448Armcx5armadillo repeat containing, X-linked 5X9870992198714347Rat
7648445Rab18-ps1RAB18, member RAS oncogene family, pseudogene 1X9875134298755986Rat
621343Gprasp1G protein-coupled receptor associated sorting protein 1X9876485398772685Rat
1585932Rps9-ps8ribosomal protein S9, pseudogene 8X9880047298801302Rat
1561019Gprasp2G protein-coupled receptor associated sorting protein 2X9881766898823814Rat
1303224Gprasp3G protein-coupled receptor associated sorting protein family member 3X9884759198854949Rat
41153492Snora57small nucleolar RNA, H/ACA box 57X9893422798934367Rat
1563536Arxes1adipocyte-related X-chromosome expressed sequence 1X9895053098952049Rat
1595509Tpgs2-ps2tubulin polyglutamylase complex subunit 2, pseudogene 2X9898103898981923Rat
2322092Arxes2adipocyte-related X-chromosome expressed sequence 2X9898584498987425Rat
1564466Bex2brain expressed X-linked 2X9901984799021375Rat
1564923Nxf3nuclear RNA export factor 3X9902590199050409Rat
1595433Tmem258l4transmembrane protein 258 like 4X9906774499069746Rat
1564749Bex4brain expressed, X-linked 4X9913198599133417Rat
1359631Tceal8transcription elongation factor A like 8X9917130799173377Rat
1594149Tceal5transcription elongation factor A like 5X9920442299207373Rat
1564643Bex1brain expressed X-linked 1X9921901499220518Rat
1593009Tceal7transcription elongation factor A like 7X9922840599230551Rat
1593001Pdcd6-ps1programmed cell death 6, pseudogene 1X9923528699235996Rat
41279049Snrpc-ps9small nuclear ribonucleoprotein polypeptide C, pseudogene 9X9923878699239261Rat
1592975Tceal9transcription elongation factor A like 9X9924564599247720Rat
3148Bex3brain expressed X-linked 3X9927327099274799Rat
2321901Dppa4-ps2developmental pluripotency-associated 4, pseudogene 2X9928490099285780Rat
41070429Parl-ps6presenilin associated, rhomboid-like, pseudogene 6X9929558599325095Rat
41064515Parl-ps3presenilin associated, rhomboid-like, pseudogene 3X9934318199344994Rat
11501301Trnaa-ugc1transfer RNA alanine (anticodon UGC) 1X9934333399343401Rat
41075092LOC120099159uncharacterized LOC120099159X9935766399370850Rat
2320517Parl-ps2presenilin associated, rhomboid-like, pseudogene 2X9986870999870800Rat
11429483Trnaa-ugc7transfer RNA alanine (anticodon UGC) 7X9987058199870649Rat
41398432Parl-ps4presenilin associated, rhomboid-like, pseudogene 4X9987372399884618Rat
41296444Parl-ps5presenilin associated, rhomboid-like, pseudogene 5X9989606999910250Rat
41317710Trnaa-ugc9transfer RNA alanine (anticodon UGC) 9X9990403699904104Rat
11490737Trnaa-ugc9transfer RNA alanine (anticodon UGC) 9X9993776899937839Rat
1562504Tceal3transcription elongation factor A like 3X100010677100012637Rat
1549724Tceal1transcription elongation factor A like 1X100058485100060439Rat
1359471Morf4l2mortality factor 4 like 2X100082562100093658Rat
7662604LOC102555540uncharacterized LOC102555540X100091319100149630Rat
1564103Glra4glycine receptor alpha 4X100110517100131042Rat
3354Plp1proteolipid protein 1X100184039100201035Rat
41182840LOC120099413U6 spliceosomal RNAX100205102100205204Rat
1598252Gstp-ps1glutathione-S-transferase, pi type, pseudogene 1X100215122100216335Rat
1562951Rab9bRAB9B, member RAS oncogene familyX100220897100231591Rat
9462175H2bw2lH2B.W histone 2 likeX100270252100271157Rat
708373Tmsb15b2thymosin beta 15B2X100298705100300820Rat
1591860Slc25a53solute carrier family 25, member 53X100306917100319662Rat
1591868Zcchc18zinc finger, CCHC domain containing 18X100319620100322822Rat
2320208Vma21-ps1vacuolar ATPase assembly factor VMA21, pseudogene 1X100323267100324804Rat
11390008LOC108349241uncharacterized LOC108349241X100329242100378311Rat
1591830Fam199xfamily with sequence similarity 199, X-linkedX100384230100419935Rat
2320172Rfc5-ps1replication factor C subunit 5, pseudogene 1X100427658100443097Rat
41348515LOC120099503small nucleolar RNA SNORA17X100437832100437946Rat
1590738Esx1ESX homeobox 1X100449298100454452Rat
2319867Tmem126a-ps1transmembrane protein 126A, pseudogene 1X100462586100463155Rat
41261795Slc25a39-ps7solute carrier family 25 member 39, pseudogene 7X100463346100464246Rat
41008958Dbi-ps1diazepam binding inhibitor, acyl-CoA binding protein, pseudogene 1X100522585100523021Rat
6486733Tbc1d20-ps1TBC1 domain family, member 20, pseudogene 1X100536405100541566Rat
1561860Pmpcb-ps1peptidase, mitochondrial processing subunit beta, pseudogene 1X100574877100579240Rat
11495543Nsa2-ps3NSA2 ribosome biogenesis factor, pseudogene 3X100710076100710834Rat
41271839Lsm12-ps1LSM12 homolog, pseudogene 1X100828120100828761Rat
1561761Il1rapl2interleukin 1 receptor accessory protein-like 2X100961509102271753Rat
6503244Hnrnpa1-ps22heterogeneous nuclear ribonucleoprotein A1, pseudogene 22X101154682101158781Rat
2323888Tex13atestis expressed 13AX101598992101601951Rat
41124784LOC120099426U6 spliceosomal RNAX101822668101822772Rat
9242858LOC103690883zinc finger protein ZPR1 pseudogeneX101927495101928445Rat
1566163NrkNik related kinaseX102365765102462957Rat
1590596Abce1-ps1ATP binding cassette subfamily E member 1, pseudogene 1X102533328102535111Rat
1588533Ubxn2a-ps1UBX domain protein 2A, pseudogene 1X102566466102569818Rat
619833Serpina7serpin family A member 7X102663242102722319Rat
7703593LOC102551064glutamic acid-rich protein-likeX102771427102773022Rat
1565148Pwwp3bPWWP domain containing 3BX102804416102838580Rat
11355376LOC108349242uncharacterized LOC108349242X102830572102893928Rat
9463875LOC103690886uncharacterized LOC103690886X102894655102935220Rat
1589457Trap1atumor rejection antigen P1AX102935503102940714Rat
1598251Ywhaz-ps2tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta, pseudogene 2X102992972102994146Rat
6499462Metap2-ps2methionyl aminopeptidase 2, pseudogene 2X102999695103003218Rat
1589413RadxRPA1 related single stranded DNA binding protein, X-linkedX103089284103176840Rat
1566282Rnf128ring finger protein 128X103183643103298431Rat
1563084Tbc1d8bTBC1 domain family member 8BX103319181103407137Rat
41246354Rps4x-ps12ribosomal protein S4, X-linked, pseudogene 12X103407238103415204Rat
1588264Ripply1ripply transcriptional repressor 1X103436731103440904Rat
1560247Cldn2claudin 2X103459870103473794Rat
1559905Morc4MORC family CW-type zinc finger 4X103477366103529026Rat
41178721Nmd3-ps1NMD3 ribosome export adaptor, pseudogene 1X103548909103550563Rat
6499494Pacsin2-ps1protein kinase C and casein kinase substrate in neurons 2, pseudogene 1X103592017103593460Rat
1590579Rbm41RNA binding motif protein 41X103605732103660381Rat
1564353Nup62clnucleoporin 62 C-terminal likeX103668458103724957Rat
1566312Dnaaf6dynein axonemal assembly factor 6X103724419103775633Rat
41394214LOC120099477small nucleolar RNA SNORA48X103852572103852714Rat
1563753Frmpd3FERM and PDZ domain containing 3X103964168104113864Rat
61955Prps1phosphoribosyl pyrophosphate synthetase 1X104132139104154191Rat
621654Tsc22d3TSC22 domain family, member 3X104217898104277886Rat
1598249Rpl23a-ps9ribosomal protein L23a, pseudogene 9X104318144104318623Rat
1565674Mid2midline 2X104354692104456757Rat
41228863LOC120099415U6 spliceosomal RNAX104370458104370564Rat
40955085Rpsa-ps18ribosomal protein SA, pseudogene 18X104461338104462092Rat
9406132LOC103694504uncharacterized LOC103694504X104462320104535699Rat
1587018Tex13btestis expressed 13BX104490937104511224Rat
41046187LOC120099487small nucleolar RNA SNORA17X104501295104501421Rat
1565570Vsig1V-set and immunoglobulin domain containing 1X104607031104640128Rat
620350Psmd10proteasome 26S subunit, non-ATPase 10X104656809104665122Rat
1596915Atg4aautophagy related 4A, cysteine peptidaseX104665345104765271Rat
1589724Col4a6collagen type IV alpha 6 chainX104766463105117499Rat
9343299LOC10369088860S ribosomal protein L10a-likeX104902239104902979Rat
1565499Col4a5collagen type IV alpha 5 chainX105118762105322699Rat
1562442Irs4insulin receptor substrate 4X105344020105360004Rat
1583851Gapdh-ps117Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 117X105466456105467608Rat
1566136Rps9l1ribosomal protein S9 like 1X105572159105572766Rat
1595365Phb1-ps20prohibitin 1, pseudogene 20X105595157105596244Rat
41009217Trnav-aac38transfer RNA valine (anticodon AAC) 38X105667790105667864Rat
620439Gucy2fguanylate cyclase 2FX105710356105808183Rat
1560204Nxt2nuclear transport factor 2-like export factor 2X105855616105862902Rat
41134219LOC120099292uncharacterized LOC120099292X105897251105928718Rat
1583501Kcne5potassium voltage-gated channel subfamily E regulatory subunit 5X105930398105931013Rat
69401Acsl4acyl-CoA synthetase long-chain family member 4X105942794106006573Rat
9146728Rpl39l2ribosomal protein L39 like 2X106046331106046530Rat
41127291LOC120099501small nucleolar RNA SNORA17X106104376106104501Rat
1563286Tmem164transmembrane protein 164X106288019106448642Rat
2325439Mir652microRNA 652X106343293106343373Rat
41209783LOC120099535U2 spliceosomal RNAX106435897106435976Rat
1561004Ammecr1AMMECR nuclear protein 1X106465982106571382Rat
6486824Rtl9retrotransposon Gag like 9X106708454106720607Rat
1584679Rps9-ps11ribosomal protein S9, pseudogene 11X106745679106746330Rat
2321164Rps17-ps2ribosomal protein S17, pseudogene 2X106867311106868233Rat
735215Chrdl1chordin-like 1X106889125106992937Rat
3251Pak3p21 (RAC1) activated kinase 3X107116308107374342Rat
70960Capn6calpain 6X107380774107405489Rat
620670DcxdoublecortinX107430767107573612Rat
1566355Cdk11bl1cyclin-dependent kinase 11B like 1X107573678107590244Rat
11468204Hmgb1l2high mobility group box 1 like 2X107671273107672015Rat
1560105Rps19-ps13ribosomal protein S19, pseudogene 13X107697983107698439Rat
7673510Sertm2serine rich and transmembrane domain containing 2X107727772107739795Rat
1564866Hnrnpa1-ps28heterogeneous nuclear ribonucleoprotein A1, pseudogene 28X107752105107759183Rat
1585885Rplp0-ps10ribosomal protein lateral stalk subunit P0, pseudogene 10X107809622107810665Rat
2319323Rps26l5ribosomal protein S26 like 5X107822185107822525Rat
1359416Alg13l1ALG13, UDP-N-acetylglucosaminyltransferase subunit like 1X107885039107906264Rat
11453602Alg13ALG13, UDP-N-acetylglucosaminyltransferase subunitX107906320107968232Rat
619787Trpc5transient receptor potential cation channel, subfamily C, member 5X107946163108230991Rat
41197927LOC120099544U2 spliceosomal RNAX107988410107988589Rat
6503255Trpc5osTRPC5 opposite strandX108025172108044201Rat
11468725LOC108349245ribosome biogenesis protein NSA2 homolog pseudogeneX108116385108117264Rat
1588188Rtl4retrotransposon Gag like 4X108231052108641768Rat
41401096LOC120099495small nucleolar RNA SNORA17X108436348108436479Rat
1588178Ube2l3-ps1ubiquitin-conjugating enzyme E2L 3, pseudogene 1X108608117108608932Rat
41086782LOC120099263uncharacterized LOC120099263X108678823108701907Rat
1563295Trirlntelomerase RNA component interacting Rnase like ncrnaX108794365108795038Rat
727927Lhfpl1LHFPL tetraspan subfamily member 1X108815596108873460Rat
1564027AmotangiomotinX108982399109041265Rat
1588241LOC680725similar to prohibitinX109377891109378863Rat
41087468LOC120099434U7 small nuclear RNAX109520306109520359Rat
1584897Eif4b-ps3eukaryotic translation initiation factor 4B, pseudogene 3X109595488109597454Rat
1586013Actg1-ps2actin, gamma 1, pseudogene 2X109619907109621911Rat
41301363LOC120099466U11 spliceosomal RNAX109679057109679190Rat
1589747Hsp90aa1-ps6heat shock protein 90 alpha family class A member 1, pseudogene 6X110207305110214134Rat
41083924Ppih-ps1peptidylprolyl isomerase H, pseudogene 1X110290281110293522Rat
2324302Mrpl15-ps2mitochondrial ribosomal protein L15, pseudogene 2X110292959110298026Rat
1333338Olr1752-psolfactory receptor pseudogene 1752X110437444110437620Rat
1598351Ppid-ps20peptidylprolyl isomerase D, pseudogene 20X110524551110525661Rat
2848Htr2c5-hydroxytryptamine receptor 2CX110640777110870288Rat
40929687Snora35small nucleolar RNA, H/ACA box 35X110671942110672069Rat
4888609Mir3552microRNA 3552X110676724110676828Rat
2325352Mir764microRNA 764X110678597110678704Rat
4888584Mir1912microRNA 1912X110685978110686065Rat
7489010Mir1298microRNA 1298X110744907110745045Rat
2325372Mir448microRNA 448X110829918110830029Rat
7658474Nr5a2-ps1nuclear receptor subfamily 5, group A, member 2, pseudogene 1X110903809110905163Rat
620838Il13ra2interleukin 13 receptor subunit alpha 2X111002590111074053Rat
1590569Lrch2leucine rich repeats and calponin homology domain containing 2X111091728111174225Rat
41266373Snora35bsmall nucleolar RNA, H/ACA box 35BX111101754111101882Rat
1584898Luzp4leucine zipper protein 4X111280490111321363Rat
1590643Hnrnpm-ps2heterogeneous nuclear ribonucleoprotein M, pseudogene 2X111324802111327221Rat
1598343Npm1-ps9nucleophosmin 1, pseudogene 9X111554751111557418Rat
41206828LOC120099514small nucleolar RNA SNORA40X111573914111574039Rat
621409Pls3plastin 3X111589193111683908Rat
41206460LOC120099378uncharacterized LOC120099378X111708629111782670Rat
40954503Ube2wl1ubiquitin-conjugating enzyme E2W like 1X111787266111794068Rat
2320301Hint1-ps3histidine triad nucleotide binding protein 1, pseudogene 3X111799148111800089Rat
1589746Ndufaf4-ps4NADH:ubiquinone oxidoreductase complex assembly factor 4, pseudogene 4X111803082111805851Rat
6493681LOC100911253uncharacterized LOC100911253X111829130111944986Rat
41271583LOC120099355uncharacterized LOC120099355X111831770111837168Rat
41011122Pcbp2-ps3poly(rC) binding protein 2, pseudogene 3X111843404111847096Rat
41367602LOC120099534U2 spliceosomal RNAX111874817111874960Rat
9214037LOC103690768histidine triad nucleotide-binding protein 1 pseudogeneX111887970111888349Rat
1584899Ndufaf4-ps6NADH:ubiquinone oxidoreductase complex assembly factor 4, pseudogene 6X111888462111890563Rat
41122277LOC120099356uncharacterized LOC120099356X111913034111918433Rat
41292304Pcbp2-ps5poly(rC) binding protein 2, pseudogene 5X111924205111927837Rat
1586014Pcbp2-ps10poly(rC) binding protein 2, pseudogene 10X111934105111936526Rat
41113214Pcbp2-ps4poly(rC) binding protein 2, pseudogene 4X111940034111943599Rat
41384159LOC120099427U6 spliceosomal RNAX111958839111958897Rat
2072Agtr2angiotensin II receptor, type 2X112119876112124060Rat
41330088LOC120099493small nucleolar RNA SNORA17X112132302112132432Rat
2323032Sord-ps1sorbitol dehydrogenase, pseudogene 1X112248482112249885Rat
1561810Slc6a14solute carrier family 6 member 14X112314643112375412Rat
41365780LOC120099391U6 spliceosomal RNAX112716579112716685Rat
2323188Sinhcaf-ps2SIN3-HDAC complex associated factor, pseudogene 2X112739910112743858Rat
1583914Ppp1cc-ps2protein phosphatase 1 catalytic subunit gamma, pseudogene 2X112812252112814475Rat
41403101C1h9orf85-ps2similar to human chromosome 9 open reading frame 85, pseudogene 2X112816111112816567Rat
6489572Ppp1r2-ps2protein phosphatase 1, regulatory (inhibitor) subunit 2, pseudogene 2X113070197113072903Rat
1562281Eif5-ps6eukaryotic translation initiation factor 5, pseudogene 6X113216161113217667Rat
1584907G3bp1-ps5G3BP stress granule assembly factor 1, pseudogene 5X113416013113418436Rat
2324557Sec61g-ps4Sec61 translocon subunit gamma, pseudogene 4X113427370113427696Rat
40933887Rps26-ps7ribosomal protein S26, pseudogene 7X113601665113609965Rat
11454080LOC108349247uncharacterized LOC108349247X113934651113951129Rat
1559646Klhl13kelch-like family member 13X113942309114107299Rat
11478890LOC108349193glyceraldehyde-3-phosphate dehydrogenase pseudogeneX114319412114321561Rat
41046912LOC120099301uncharacterized LOC120099301X114425480114471782Rat
727965Wdr44WD repeat domain 44X114481890114587307Rat
9081780LOC103690899histidine triad nucleotide-binding protein 1 pseudogeneX114629601114636435Rat
41130514LOC120099418U6 spliceosomal RNAX114663691114663792Rat
1305365Tesltestis derived transcript-likeX114680227114693795Rat
1566184Tesl1testin LIM domain protein like 1X114757064114815923Rat
1590912Tesl-ps1testis derived transcript-like, pseudogene 1X114872762114873984Rat
9345774LOC103690894uncharacterized LOC103690894X114922993114939876Rat
1566387Tesl2testin LIM domain protein like 2X114972836115005286Rat
7650932LOC102553553uncharacterized LOC102553553X115025996115030878Rat
41185184LOC120099448small Cajal body-specific RNA 13X115087944115088214Rat
1594344Rps15-ps3ribosomal protein S15, pseudogene 3X115101013115101602Rat
1564707Dock11dedicator of cytokinesis 11X115131720115314854Rat
628741Il13ra1interleukin 13 receptor subunit alpha 1X115348822115408682Rat
1359439Zcchc12zinc finger CCHC-type containing 12X115433444115436691Rat
1565451Lonrf3LON peptidase N-terminal domain and ring finger 3X115565214115603886Rat
41183603LOC120099417U6 spliceosomal RNAX115600746115600818Rat
7519078Ct47b1cancer/testis antigen family 47, member B1X115651472115655191Rat
1561445Kiaa1210KIAA1210 homologX115675412115725950Rat
70890Pgrmc1progesterone receptor membrane component 1X115832865115841060Rat
1566363Akap17bA kinase (PRKA) anchor protein 17BX115843263115881597Rat
41388056LOC120099476small nucleolar RNA SNORA48X115916685115916825Rat
1565032Elobl6elongin B like 6X115936938115937292Rat
2319295Mrpl30-ps4mitochondrial ribosomal protein L30, pseudogene 4X115956680115957166Rat
1559928Slc25a43solute carrier family 25, member 43X115977437116011789Rat
41385866LOC120099452small nucleolar RNA SNORA36 familyX116009779116009910Rat
41149933LOC120099459small nucleolar RNA SNORA1X116020859116020995Rat
1585073Bcas2-ps1BCAS2, pre-mRNA processing factor, pseudogene 1X116026387116027059Rat
41341586Trnap-agg76transfer RNA proline (anticodon AGG) 76X116027434116027514Rat
620353Slc25a5solute carrier family 25 member 5X116031896116034963Rat
1564541Steep1STING1 ER exit protein 1X116087626116114159Rat
1359534Ube2aubiquitin-conjugating enzyme E2AX116114339116125076Rat
6500424NkrfNFKB repressing factorX116126341116144554Rat
1585082Septin6septin 6X116153255116230334Rat
1563086Sowahdsosondowah ankyrin repeat domain family member DX116292030116293660Rat
3593Rpl39ribosomal protein L39X116327216116330211Rat
41331878LOC120099449small nucleolar RNA SNORA69X116327776116327909Rat
1560264Upf3bUPF3B, regulator of nonsense mediated mRNA decayX116335308116353332Rat
1565955NkapNFKB activating proteinX116373031116392677Rat
708510Akap14A-kinase anchoring protein 14X116395512116410697Rat
1560955Ndufa1NADH:ubiquinone oxidoreductase subunit A1X116424223116427875Rat
1359693Rnf113a1ring finger protein 113A1X116427941116429164Rat
1560927Rhoxlreproductive homeobox likeX116442675116444106Rat
1565307Rhox4greproductive homeobox 4GX116472094116477855Rat
2301305Rhox3reproductive homeobox on X chromosome 3X116482945116487394Rat
1588607Rhoxf2bRhox homeobox family member 2BX116507488116514240Rat
3295Rhox5Rhox homeobox family member 5X116536207116541972Rat
2321855Rhox9l1reproductive homeobox 9 like 1X116560244116562636Rat
41146938LOC120099169keratinocyte proline-rich protein-likeX116572842116577387Rat
1561047Rhox8reproductive homeobox 8X116584742116588365Rat
41078949Ift52-ps1intraflagellar transport 52, pseudogene 1X116594807116598029Rat
1563189Rhox7Rhox homeobox family member 7X116627645116635721Rat
1563844Rhox9reproductive homeobox 9X116641863116644714Rat
11373868Ormdl1-ps4ORMDL sphingolipid biosynthesis regulator 1, pseudogene 4X116664953116666436Rat
1586238Crls1-ps2cardiolipin synthase 1, pseudogene 2X116677939116679090Rat
1586239Shox1SHOX homeobox 1X116688163116695111Rat
1586244Crls1-ps1cardiolipin synthase 1, pseudogene 1X116707078116712324Rat
1563150Btg1cBTG anti-proliferation factor 1CX116749728116754643Rat
1566035Ptp4a1l1protein tyrosine phosphatase 4A1 like 1X116789584116790544Rat
1598239Btg1bBTG anti-proliferation factor 1BX116794228116805478Rat
1563291Rhox10reproductive homeobox 10X116850407116854953Rat
1564332Rhox11Rhox homeobox family member 11X116871656116880123Rat
1563789Rhox12Rhox homeobox family member 12X116890562116897981Rat
1586264Rhox13Rhox homeobox family member 13X116911226116917758Rat
40975408LOC120099475small nucleolar RNA SNORA48X116931587116931725Rat
1566309Zbtb33zinc finger and BTB domain containing 33X116963337116970547Rat
727788Tmem255atransmembrane protein 255AX116970793117035008Rat
620994Atp1b4ATPase Na+/K+ transporting family member beta 4X117087284117108023Rat
2322721Tex13c3TEX13 family member C3X117151627117153132Rat
2990Lamp2lysosomal-associated membrane protein 2X117173097117222090Rat
1564494Cul4bcullin 4BX117287481117326688Rat
1566390Mcts1MCTS1, re-initiation and release factorX117350723117362504Rat
1311230C1galt1c1C1GALT1-specific chaperone 1X117378123117382620Rat
41355609LOC120099489small nucleolar RNA SNORA17X117548920117549051Rat
15862896030498E09RiklRIKEN cDNA 6030498E09 gene likeX117556991117756327Rat
1560124Rpl10al2ribosomal protein L10A like 2X117620592117621326Rat
41354497LOC120099455small nucleolar RNA SNORA42/SNORA80 familyX117874309117874425Rat
11409794Actg1-ps5actin, gamma 1, pseudogene 5X117902835117903594Rat
7663400Gapdh-ps83Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 83X118185012118206590Rat
11391862LOC10834919560S ribosomal protein L7a pseudogeneX118279924118280718Rat
41338750LOC120099282cysteine-rich perinuclear theca protein 1-likeX118533863118534605Rat
1586045Fh-ps2fumarate hydratase, pseudogene 2X118692571118694745Rat
2323548Tubg1-ps3tubulin, gamma 1, pseudogene 3X119455925119456663Rat
1593267Mcfd2-ps1multiple coagulation factor deficiency 2, pseudogene 1X119699856119700275Rat
6489636Zpr1-ps1ZPR1 zinc finger, pseudogene 1X119774008119781347Rat
41388172Rps27-ps5ribosomal protein S27, pseudogene 5X120201439120201694Rat
70958Gria3glutamate ionotropic receptor AMPA type subunit 3X120238515120504106Rat
1596967Eif3k-ps2eukaryotic translation initiation factor 3, subunit K, pseudogene 2X120567963120568598Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10124DXWox27134X112133718112133852Ratregion
10125DXMgh7230X112124540112124758Ratregion
10214DXWox23277X7116029171160568Ratregion
10341DXWox24166X7833922878339394Ratregion
11122DXWox26148X100203334100203482Ratregion
34192DXMgh9145X6561219265612337Ratregion
34385DXMgh10133X7087197370872106Ratregion
36049DXRat19162X107292714107292880Ratregion
37492DXRat71189X8574804985748235Ratregion
36966DXRat18164X9869955098699714Ratregion
37648DXRat73139X110631371110631508Ratregion
36735DXRat32175X9395649193956666Ratregion
34825DXRat20175X113805422113805597Ratregion
34991DXRat66138X110639479110639627Ratregion
35739DXRat17171X8830761688307787Ratregion
39636DXRat115213X103865285103865500Ratregion
39926DXRat94206X9636044396360649Ratregion
39966DXRat96133X9779404097794173Ratregion
40448DXRat127129X100567703100567836Ratregion
40690DXRat97148X107826652107826800Ratregion
38644DXRat45239X9204199692042229Ratregion
38822DXRat51235X8226051782260752Ratregion
38890DXRat34106X9425203394252141Ratregion
39120DXRat69248X112253959112254209Ratregion
39210DXRat64241X112934952112935181Ratregion
39360DXRat63247X111179235111179484Ratregion
41396DXRat100157X115075611115075776Ratregion
41508DXRat92163X6708405167084216Ratregion
42439DXRat147229X9323083893231060Ratregion
42440DXRat148204X106008181106008389Ratregion
41624DXRat99145X117002093117002232Ratregion
41658DXRat129241X110631363110631602Ratregion
43151DXRat132201X116926119116926150Ratregion
43157DXRat134200X9337498393375181Ratregion
43158DXRat136146X7689073976890878Ratregion
43159DXRat135247X7946191379462171Ratregion
43163DXRat139245X111183810111184051Ratregion
44552D9Wox21136X7310801273108063Ratregion
43406DXGot57260X120556020120556280Ratregion
44360DXGot47187X109544084109544275Ratregion
43947DXWox3130X120568566120568734Ratregion
43956DXGot61141X113517713113517854Ratregion
60685DXGot46222X111179183111179407Ratregion
60686DXGot48250X116647192116647444Ratregion
60687DXGot4998X116904115116904211Ratregion
60688DXGot50148X115310181115310329Ratregion
60689DXGot51204X116074418116074624Ratregion
60690DXGot52167X117722055117722222Ratregion
60690DXGot52167X117722055117722222Ratregion
60691DXGot53257X116199160116199418Ratregion
60695DXGot63147X116269250116269397Ratregion
60696DXGot64219X113419015113419234Ratregion
62513D9Uia3138X8445701984457122Ratregion
67224D6Arb14215X6689049066890707Ratregion
1630246DXGot170196X9773229197732486Ratregion
1630344DXGot161209X106300074106300283Ratregion
1630816DXGot102237X103992664103992903Ratregion
1631112DXGot159196X7607060976070805Ratregion
1631344DXGot121125X108783743108783865Ratregion
1631802DXGot116298X113256622113256920Ratregion
1632086D1Wox71131X100216051100216182Ratregion
1632244DXGot163233X9403382694034057Ratregion
1627997DXGot135125X6835437168354496Ratregion
1628896DXGot162157X9598935795989516Ratregion
1629085DXGot139243X9303790093038140Ratregion
1629518DXGot142299X7056842770568722Ratregion
1629531DXGot143145X6862978768629932Ratregion
1629678DXGot100193X101475391101475579Ratregion
1638725DXGot188273X100166942100167215Ratregion
1638868DXGot186217X7224185672242073Ratregion
1639011DXGot184105X9480552794805627Ratregion
1639230DXGot193226X7800222178002442Ratregion
1641070DXGot203217X107874509107874726Ratregion
1641484DXGot105183X7651408176514144Ratregion
1641725DXGot202170X8973301789733191Ratregion
1639729DXGot182264X103307188103307454Ratregion
1632572DXGot14893X9419245494192547Ratregion
1632881DXGot134117X9784021397840330Ratregion
1633419DXGot177267X7132969171329964Ratregion
1640721DXGot197215X9665284796653062Ratregion
1636203DXGot169133X8100204481002177Ratregion
1636508DXGot117146X100605465100605611Ratregion
1636799DXGot138207X8986118389861390Ratregion
1637003DXGot112187X9591566595915852Ratregion
1637020DXGot156224X7069904270699266Ratregion
1637136DXGot118160X7243532572435485Ratregion
1637664DXGot108227X8064664380646870Ratregion
1637817DXGot101115X8805631088056425Ratregion
1637864DXGot131141X9800901198009152Ratregion
1638086DXGot120204X7274977272749976Ratregion
1638359DXGot130150X101018161101018313Ratregion
1633700DXGot160208X108339157108339360Ratregion
1633700DXGot160208X108339157108339360Ratregion
1633894DXWox35244X116539292116539536Ratregion
7205926PMC28413P1115X116761789116761904Ratregion
7192179Pou3f4975X7585876475859739Ratregion
7193104AA924752189X111923266111923454Ratregion
7193104AA924752189X111933167111933355Ratregion
7193104AA924752189X111939024111939212Ratregion
7206068Smox608X9801542298016030Ratregion
5035749SHGC-24065127X9752744597527572Ratregion
5035851PMC23951P1565X109620324109620789Ratregion
5035893PMC30125P1221X7166556671665787Ratregion
5035925PMC311008P1942X100194197100195139Ratregion
5036011PMC85361P1357X109620276109620627Ratregion
5036057Cldn2693X103467561103468254Ratregion
5036157D11Bhm8895X111074368111074463Ratregion
7206556UniSTS:547054892X6868010268680994Ratregion
7206764ha29320X8820608988206554Ratregion
7206766ha30420X6955161469552493Ratregion
7206802RH126864236X9921901599219251Ratregion
5039280RH127615196X7618207576182271Ratregion
5039280RH127615196X7618207576182271Ratregion
5039304RH127629218X106900903106901121Ratregion
5036541Xist131X6847462568474756Ratregion
5036625AU048634164X7998647279986638Ratregion
5036971AU049792163X7585991975860082Ratregion
5036973AU049795223X105054231105054439Ratregion
5036973AU049795223X105054231105054446Ratregion
5037071DXS7002E116X9677253696772652Ratregion
5037079WI-21742265X100221582100221847Ratregion
5037163RH79662183X6642753166427714Ratregion
5035581DBX87X116167281116167369Ratregion
5035610DXS8324122X117362343117362465Ratregion
5033845RH140330146X115436518115436664Ratregion
5025992RH130489182X104656950104657132Ratregion
5026104RH130926180X9923027499230454Ratregion
5028615AI451128287X113942335113942622Ratregion
5028619U21795146X6639526166395407Ratregion
7205800D1S2012E0X115210686115211098Ratregion
5031466AU048230125X9160631091606435Ratregion
5026220RH131375196X6645516066455356Ratregion
5028757RH142214155X116541446116541601Ratregion
5028835RH142511107X7089977370899880Ratregion
5034213RH141795195X117289193117289388Ratregion
5034323AI029857182X116482893116484406Ratregion
5026380RH131983189X9859124498591433Ratregion
5026430RH132181192X107946335107946527Ratregion
5028909RH142784121X6773304667733167Ratregion
5029015RH143192132X100060275100060407Ratregion
5031712AU047399165X9265172892651783Ratregion
5031740AU047308180X101526089101526269Ratregion
5031820AU047046120X105105656105105776Ratregion
5026442RH132228188X8834767888347866Ratregion
5026554RH132657220X6645584366456063Ratregion
5029221RH143976202X107373970107374172Ratregion
5034646BI275023162X6854616768546329Ratregion
5029307RH144301184X9765500397655187Ratregion
5032321AI84742280X7019268370192763Ratregion
5035056SHGC-16181144X6678499066785134Ratregion
5035078G36435152X6730271467302867Ratregion
5027079D12S169959X8196845881968517Ratregion
5027137WI-14596129X7767941077679539Ratregion
5029867AI059951183X7128935671289539Ratregion
5032547RH78520159X9882335098823509Ratregion
5034916AI008298220X116393490116393710Ratregion
5032859RH136750122X6862862768628749Ratregion
5027443AW319508121X108898630108898751Ratregion
5027551AW10764087X112123581112123668Ratregion
5027557AI666735167X7124155071241717Ratregion
5027559AI987883148X103297209103297357Ratregion
5030287BE099951163X106720395106720558Ratregion
502787920.MMHAP24FLG2.seq151X100558568100558719Ratregion
5025428RH128278186X106466185106466371Ratregion
5028053R75060150X6844669268446970Ratregion
5030565BE113212206X6857494768575153Ratregion
5033499RH139054162X111628349111628511Ratregion
5025506RH128583220X9766040097660620Ratregion
5033655RH139618207X9727732197277528Ratregion
5025632RH129063217X104657347104657564Ratregion
5028305DXMit238114X115320656115320770Ratregion
5028310DXMit9101X100200819100200920Ratregion
5031019BE121059215X6739174967391964Ratregion
5033831RH140281152X9776884497768996Ratregion
5028438AU014668131X6844755068447679Ratregion
5031147BE116356164X6846943868469602Ratregion
5031193RH102301153X115314413115314566Ratregion
5053481RH142674100X6684574066846829Ratregion
5056297RH144297149X6861761668617765Ratregion
5056459RH144390265X106438054106438319Ratregion
5051611AW260253127X116970302116970429Ratregion
5051619AW108051139X7248643372486572Ratregion
5051661AI662791104X7228035972280463Ratregion
5053977RH142959157X7016004370160200Ratregion
5056519RH144425137X9873159498731731Ratregion
5054355RH143176113X120436857120436970Ratregion
5057092AI511027187X6849691268497099Ratregion
5057394AA924643185X9816843198168616Ratregion
5057514AA819641201X117178827117179028Ratregion
5055287RH143714122X6849567368495795Ratregion
5055771RH143993205X117358385117358590Ratregion
5054777RH143419194X9829295098293144Ratregion
5054777RH143419194X9849442798494621Ratregion
5055031RH143566222X8930535189305573Ratregion
5058026BF386488200X6681737666817576Ratregion
5056081RH144172130X7040435170404481Ratregion
5056335RH144319100X7015020770150307Ratregion
5056139RH144205165X7971887079719035Ratregion
5056655RH144503245X116226921116227165Ratregion
5052249D573244X100200676100200920Ratregion
5052279MDB0137196X8195298381953179Ratregion
5052567AU023707168X115603531115603699Ratregion
5059826BF394567237X8615080486151041Ratregion
5058270BF386911171X7129100871291179Ratregion
5052335U39738194X107367951107368145Ratregion
5052367X92352189X6817440168174590Ratregion
5053189RH142505122X6635168066351802Ratregion
5058428BE096007141X105942849105942990Ratregion
5053343RH142594167X6862852468628691Ratregion
5053363RH142605132X9794173597941867Ratregion
5059346BG377529213X6859686868597081Ratregion
5057648AI548344189X6666010766660296Ratregion
5057860BF386272154X7830519078305342Ratregion
5050796RH134263210X116335393116335603Ratregion
5054187RH143080275X112374709112374984Ratregion
5050446RH134061205X6850056768500772Ratregion
5051216RH134506208X9921905199219259Ratregion
5054303RH143147137X115176803115176940Ratregion
5050784RH134256205X105702568105702773Ratregion
5051727RH94622113X110867633110867746Ratregion
5054611RH143323112X6898981468989926Ratregion
5054651RH143347107X115204825115205309Ratregion
5050902RH134324183X107589713107589896Ratregion
5050916RH134332205X6760133467601539Ratregion
5044062RH130388193X9790251697902709Ratregion
5043260RH129924207X9905026799050475Ratregion
5044744RH130779197X6872296768723164Ratregion
5044940RH130891188X9776902697769213Ratregion
5045026RH130940197X116087909116088106Ratregion
5044110RH130415192X7148963171489823Ratregion
5044188RH130460194X105322455105322649Ratregion
5045752RH131358186X100322465100322651Ratregion
5045950RH131472162X7204501772045179Ratregion
5045978RH131488199X6671563366715832Ratregion
5041804RH129068201X9895184298952043Ratregion
5044802RH130812196X103480711103480907Ratregion
5048672RH133039210X6849863468498844Ratregion
5048708RH133060217X6684437066844587Ratregion
5044946RH130894201X7377692673777127Ratregion
5046464RH131768182X116970298116970480Ratregion
5047736RH132499208X7133867671338884Ratregion
5047736RH132499208X7146779371468001Ratregion
5047740RH132501181X6568259565682776Ratregion
5048972RH133212208X111620504111620713Ratregion
5045840RH131409217X6793854967938907Ratregion
5045888RH131436180X7103872971038909Ratregion
5047866RH132574187X9707238597072572Ratregion
5049032RH133247199X9884916098850651Ratregion
5049150RH133314190X102462654102462844Ratregion
5046746RH131931182X6758584367586025Ratregion
5047992RH132646206X104766601104766809Ratregion
5046772RH131946219X7120123171201450Ratregion
5048060RH132685198X9791199597912193Ratregion
5048060RH132685198X9791199597912193Ratregion
5048060RH132685198X9792911097929308Ratregion
5048060RH132685198X9792911097929308Ratregion
5048308RH132828181X7144795171448132Ratregion
5039518RH127751180X9779558197795760Ratregion
5047300RH132248200X116126415116126615Ratregion
5048346RH132850215X6921595569216170Ratregion
5039796RH127912196X8887608388876279Ratregion
5042530RH129490214X6634003166340245Ratregion
5039994RH128027180X7345897673459156Ratregion
5042724RH129607199X106296855106297054Ratregion
5042888RH129704182X117057329117057511Ratregion
5042220RH129309188X9816842898168616Ratregion
5040372RH128245203X107380969107381172Ratregion
5040874RH128533217X103298015103298232Ratregion
5043530RH130078206X9765788497658090Ratregion
5043542RH130085194X100298727100298921Ratregion
5040226RH128162219X9927442999274648Ratregion
5041038RH128627208X119708403119708611Ratregion
5041038RH128627208X119708403119708611Ratregion
5041112RH128669163X113219370113219533Ratregion
5043918RH130305155X9801619598016350Ratregion
5041586RH128942185X9794053297940717Ratregion
5072712RH137009199X109595553109595749Ratregion
5072442RH136852180X6872109368721273Ratregion
5076042RH138945139X6840252868402667Ratregion
5076540RH139235130X6656544866565578Ratregion
5072798RH137059181X108982573108982754Ratregion
5072810RH137066200X8064907880649278Ratregion
5076992RH139497180X115436360115436540Ratregion
5077504RH139794204X9709268897092892Ratregion
5077604RH139852185X6929276469292949Ratregion
5077616RH139859197X7285439872854595Ratregion
5077746RH139933202X112123527112123728Ratregion
5079460RH141010218X7617993176180151Ratregion
5079460RH141010218X7617993176180151Ratregion
5075784RH138795162X104153874104154036Ratregion
5079550RH141063181X6582391465824095Ratregion
5079574RH141078189X103727244103727433Ratregion
5079578RH141081219X6571894865719167Ratregion
5077212RH139627202X102435942102436144Ratregion
5077212RH139627202X102436090102436144Ratregion
5077284RH139668195X6843756668437761Ratregion
5077364RH139714217X9853541798535634Ratregion
5079812RH141217196X6858864968588845Ratregion
5077756RH139940196X115603643115603839Ratregion
5077862RH140002207X100307071100307278Ratregion
5077934RH140044204X9594009195940295Ratregion
5077934RH140044204X9594009195940295Ratregion
5077994RH140080205X100200230100200435Ratregion
5080046RH141352203X6680624666806449Ratregion
5080092RH141378208X108898632108898836Ratregion
5079170RH140776123X6720348367203606Ratregion
5070706RH134657200X103436904103437104Ratregion
5079342RH140935185X9806941598069600Ratregion
5071156RH134920180X9323429493234474Ratregion
5080480RH141603184X100329701100329885Ratregion
5071270RH134985184X115314589115314773Ratregion
5073546RH137499202X117376837117377039Ratregion
5073772RH137629126X6621931266219438Ratregion
5072976RH137163220X6622719066227410Ratregion
5071694RH135230183X9898715498987337Ratregion
5074218RH137889136X107372564107372700Ratregion
5074282RH137926171X6633490266335074Ratregion
5071466RH135098214X9713187597132089Ratregion
5073800RH137646120X9877240798772527Ratregion
5074638RH138132187X101278752101278939Ratregion
5061734BF402772164X6801242968012593Ratregion
5063334BE107545151X9760110897601259Ratregion
5063438BI289865156X9765139497651550Ratregion
5064990BE108854204X9874709798747301Ratregion
5066622AU048248210X7648197576482185Ratregion
5067532AU047688159X9226308992263248Ratregion
5067712AU047581163X6903664669036809Ratregion
5067712AU047581163X6903668769036809Ratregion
5067932AU047450213X109480507109480722Ratregion
5068124AU047333178X7309443673094612Ratregion
5068156AU047314125X102510289102510414Ratregion
5068642AU047022296X9257495592575251Ratregion
5069400AU046524162X112423508112423667Ratregion
5069528AU046438261X117344411117344672Ratregion
5069566AU046411206X109794791109795534Ratregion
5069646AU046363218X7811019678110316Ratregion
5070330U70859141X6621010266210243Ratregion
5070414AI448995130X100307065100307195Ratregion
5070416AV16856380X102461333102461413Ratregion
5070488AI854765147X6571882765718974Ratregion
5070506AU022198199X6767369967673898Ratregion
5069216AU046642167X8184054281840704Ratregion
5069268AU046608248X105922529105922605Ratregion
5060140AI072432187X116156950116157137Ratregion
5061902BI29412297X7204681572046912Ratregion
5062058BI294846104X103282403103282507Ratregion
5060584BI286056133X6720703067207163Ratregion
5062392BF397876161X115600212115600373Ratregion
5062486BF397986168X6724569067245858Ratregion
5063830BE120006150X9274173892741888Ratregion
5060902BF395935125X6632192266322047Ratregion
5062760AW534334160X7431457874314738Ratregion
5064420BI302169182X105430215105430397Ratregion
5060100BF388493202X115844128115844330Ratregion
5061890BI294036164X115598521115598685Ratregion
5062064BF397358216X103608981103609197Ratregion
5065140AI044873220X116395190116395411Ratregion
5065278BE121346101X116153470116153571Ratregion
5062350BE106581133X100221003100221136Ratregion
5065500BE109132151X107370873107371024Ratregion
5065740BF406326166X6737956267379728Ratregion
5065770BE109826158X6851255768512715Ratregion
5064426BI302182183X106107089106107272Ratregion
5065918BE116098215X7731659477316809Ratregion
5066128BE116925189X108809377108809566Ratregion
5061300BI293668137X6634882466348961Ratregion
5063062BE113681170X106426400106426570Ratregion
5063114BE107180214X117181960117182174Ratregion
5064658BF399517122X104263508104263630Ratregion
5066374AU048395273X118590796118591071Ratregion
5066416AU048369127X9002167290021799Ratregion
5063202BE113894158X9312005093120208Ratregion
5084346AA850209201X6739877167398972Ratregion
5084348AI408836243X116327367116327610Ratregion
5086367BF401448149X107966051107966200Ratregion
5082409BE119338170X6587292065873090Ratregion
5087710Atp7a526X7116334371163869Ratregion
5088052Pou3f4429X7585871175859140Ratregion
5088126Trap1a207X102942389102942596Ratregion
5087346AW916095169X6844661668446917Ratregion
5089153AU048986107X6818738868187425Ratregion
5089153AU048986107X9774854997748585Ratregion
5089933AU049450193X103719292103719485Ratregion
5089463AU049171130X105532692105532822Ratregion
5089489AU049186202X9811890298119104Ratregion
5083829AI599687149X107942438107942587Ratregion
5088873AU048820160X9212342892123588Ratregion
5089691AU049305157X119726206119726363Ratregion
5090487AU049779173X9649661296496785Ratregion
5083942AA892682128X6857051668570644Ratregion
5084480AI013752173X6785229467852467Ratregion
5084528AI013864228X9911196099112364Ratregion
5084528AI013864228X9911213699112364Ratregion
5084320AA850194230X6568174265681972Ratregion
5081831BE118467184X9777060497770788Ratregion
5084872AI171612172X116124645116124817Ratregion
5084984AI179798152X103668657103668809Ratregion
5082149BI280022171X117620601117620772Ratregion
5090761AU049947160X6814734768147503Ratregion
5088421AU048559194X7470554974705743Ratregion
5088509AU048612265X118411244118411509Ratregion
5080852RH141820202X100199170100199372Ratregion
5081004RH141908219X6848046668480685Ratregion
5081026RH141922180X9709307997093985Ratregion
5090333AU049689158X7204961172049769Ratregion
5090495AU049784162X107038515107038679Ratregion
5081198RH142021186X107883705107885105Ratregion
5090283AU049659201X8064664380646843Ratregion
5090289AU049663148X7228108772281235Ratregion
5080958RH141881190X116393852116394042Ratregion
5082749BF390019176X6858257268582748Ratregion
5086357AA891585190X7593954675939737Ratregion
5086357AA891585190X7593954675939737Ratregion
5084764AI00834292X116154493116154585Ratregion
5081615BE117640170X116339316116339486Ratregion
5084014AI233013108X6570423265704340Ratregion
5502692Mum1l1118X102836173102836291Ratregion
5502835KLHL13187X113974248113974984Ratregion
5507600Ngfrap1557X9927417899274735Ratregion
5503336UniSTS:238089279X103481126103481405Ratregion
5503330UniSTS:23806395X6994397269944067Ratregion
5503338UniSTS:238086277X100321902100322179Ratregion
5503774UniSTS:471007734X7276144872762182Ratregion
5504016px-26h3259X7368832873688587Ratregion
5504054px-48d2169X115240001115240170Ratregion
5504099px-43b11113X6727027067270383Ratregion
5507692Il2rg109X6639593466396380Ratregion
5503996px-14c7137X116106432116106569Ratregion
5504006px-1f12104X113174890113174994Ratregion
5504024px-35c7165X6665062666650791Ratregion
5504038px-40h8108X9544989895450006Ratregion
5504046px-44a4140X9378403493784174Ratregion
5504032px-38g2103X8151930881519411Ratregion
5504042px-41g5102X102459848102459950Ratregion
5504546PMC303371P1340X6735132567351665Ratregion
5504740PMC86565P3295X105359006105359301Ratregion
5504115px-6d9128X6642059966420727Ratregion
5505263Irs4395X105344181105344576Ratregion
5504500PMC24278P1133X9775319797753330Ratregion
5505068Agtr281X112122316112122397Ratregion
5505288C77370727X6909954069100267Ratregion
5505658UniSTS:4885321443X116292100116293543Ratregion
5505923UniSTS:496533962X112121421112122383Ratregion
5506035DIAPH2108X9277795692778064Ratregion
5506037ATG4A150X104764338104764488Ratregion
5506296D17S895E98X109378033109378130Ratregion
5506391Hnrph2660X9778487797785537Ratregion
5506415UniSTS:479188613X8563871585639328Ratregion
5506163UniSTS:498498735X9793931997940054Ratregion
5506370UniSTS:478993666X6864399368644659Ratregion
5506378UniSTS:479053629X100321479100322108Ratregion
5506405UniSTS:479162546X7158985871590404Ratregion
5506227Pof1b1409X7768736077688769Ratregion
5507015fj68h09.x160X6692356366923623Ratregion
5507015fj68h09.x160X6692356366923642Ratregion
5499549AW04983986X6822899168229077Ratregion
5499661MARC_6759-6760:992007400:1560X7091243670912996Ratregion
5501049PMC127682P1454X6684535966845813Ratregion
5501213PMC155645P2525X6639726666397791Ratregion
5501982MARC_21759-21760:1023907404:5752X116091612116092364Ratregion
5500125UniSTS:236937151X6767289267673043Ratregion
5500292D20S1001100X116392481116392581Ratregion
5500332GDB:193196783X115306844115307626Ratregion
5500061UniSTS:236495193X7617860576178813Ratregion
5500340GDB:194747131X6730153667301970Ratregion
5502277RH12426288X9218100192181089Ratregion
5502831NAP1L3166X8834862588348791Ratregion
5500527RH135882131X6681476566814896Ratregion
5500723RH3666075X6908879169088866Ratregion
5500771stSG613347484X7031822370318707Ratregion
5500487RH126514254X100082620100082874Ratregion
5500495RH126553249X116088325116088574Ratregion
5503320UniSTS:238015122X116970304116970426Ratregion
5503334UniSTS:238078303X9798261797982920Ratregion
5503776UniSTS:471006785X7276142172762206Ratregion
5501195PMC153509P1282X112121846112122128Ratregion
5501540G16011149X117316169117316318Ratregion
5501279G36434120X6730279467302914Ratregion
5501740MARC_10371-10372:999098922:1324X6644965566449979Ratregion
5501900MARC_17127-17128:1021042642:1384X6582861765829001Ratregion
5502118MARC_5059-5060:996690096:1309X107589759107590068Ratregion
5502210GDB:5962501474X7085512770856601Ratregion
12790681rs647545980X9276705092767050Ratregion
Position Markers

Flank 1: (DXMgh9)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X65,612,192 - 65,612,337 (+)MAPPER
Rnor_6.0X70,352,120 - 70,352,264NCBI
Rnor_5.0X71,224,072 - 71,224,216UniSTS
RGSC_v3.4X88,514,168 - 88,514,313RGD
RGSC_v3.4X88,514,169 - 88,514,313UniSTS
RGSC_v3.1X88,587,601 - 88,587,746RGD
CeleraX65,971,600 - 65,971,744UniSTS
Cytogenetic MapX RGD
Peak: (DXRat66)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X110,639,479 - 110,639,627 (+)MAPPER
Rnor_6.0X36,769,460 - 36,769,609NCBI
Rnor_6.0X118,083,215 - 118,083,362NCBI
Rnor_5.0X118,224,438 - 118,224,585UniSTS
RGSC_v3.4X31,245,654 - 31,245,802RGD
RGSC_v3.4X31,245,655 - 31,245,802UniSTS
RGSC_v3.1X31,299,123 - 31,299,271RGD
CeleraX109,957,262 - 109,957,405UniSTS
SHRSP x BN MapX31.99RGD
SHRSP x BN MapX31.99UniSTS
Cytogenetic MapXq34-q35.1UniSTS
Flank 2: (DXWox3)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2X120,568,566 - 120,568,734 (+)MAPPER
Rnor_6.0X127,888,048 - 127,888,215NCBI
Rnor_5.0X127,982,894 - 127,983,061UniSTS
CeleraX119,694,765 - 119,694,932UniSTS
RH 3.4 Map5716.9RGD
RH 3.4 Map5716.9UniSTS
RH 2.0 Map5727.5RGD
Cytogenetic MapX RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1598872Memor14Memory QTL 144.5exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X93956491138956491Rat
1598809Memor15Memory QTL 154.4exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X103312877148312877Rat
738025Stresp3Stress response QTL 34.610.0066stress-related behavior trait (VT:0010451)defensive burying - approachX100567703150256146Rat
738029Stresp2Stress response QTL 23.40.0004stress-related behavior trait (VT:0010451)defensive burying - approachX112934952138400867Rat
10059603Bw174Body weight QTL 1743.40.025body mass (VT:0001259)body weight (CMO:0000012)X113937816152453651Rat
70221Bp56Blood pressure QTL 564.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)X5704214165612192Rat
724551Glom1Glomerulus QTL 12.80.0004kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)X75294106120294106Rat
1598837Memor13Memory QTL 133.2exploratory behavior trait (VT:0010471)difference between time of physical contact/close proximity of test subject and social stimulus during sample phase and test phase (CMO:0002678)X41052407146860749Rat
1598856Memor1Memory QTL 11.9exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)X103312877148312877Rat
61430Cia18Collagen induced arthritis QTL 183.1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X14843113120568734Rat
61431Cia19Collagen induced arthritis QTL 194.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)X65612192120568734Rat
738035Stresp1Stress response QTL 14.960.000011stress-related behavior trait (VT:0010451)defensive burying - copingX41304447112935181Rat
5685004Bss104Bone structure and strength QTL 1043.9tibia area (VT:1000281)tibia area measurement (CMO:0001382)X113805422126975220Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Cia19


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2006-04-14 Cia19  Collagen induced arthritis QTL 19    Type II Collagen induced arthritis QTL 19  Name updated 1299863 APPROVED

RGD Curation Notes
Note Type Note Reference
qtl_gene 280 known and 116 novel genes were found in an analysis based on PubMed and OMIM data 2307198
qtl_gene whole genome analysis using PGMapper revealed Ar as RA associated gene and Ar as RA associated polymorphism either in coding or regulatory region 2300074