Scl12 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Scl12 (Serum cholesterol level QTL 12) Rattus norvegicus

Symbol: Scl12
Name: Serum cholesterol level QTL 12
RGD ID: 61407
Previously known as: Lil1; Lipid Level QTL 1
Trait: blood HDL cholesterol amount   (VT:0000184)    
Measurement Type: serum high density lipoprotein cholesterol level   (CMO:0000361)    
LOD Score: Not Available
P Value: 0.001
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21913,926,401 - 30,303,727RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01915,294,524 - 33,991,703RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01926,391,608 - 44,874,904RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41914,981,499 - 32,108,153RGDRGSC3.4
RGSC_v3.11914,986,402 - 32,110,066RGD
Cross Type: F2
Strains Crossed: SHR/Ola BN-Lx 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Vertebrate Trait

Rat Strain
BN-Lx  (IEA)
SHR/Ola  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Quantitative trait loci influencing cholesterol and phospholipid phenotypes map to chromosomes that contain genes regulating blood pressure in the spontaneously hypertensive rat. Bottger A, etal., J Clin Invest 1996 Aug 1;98(3):856-62

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
2571Ces1ccarboxylesterase 1C191392640113955527Rat
1583671Ces1acarboxylesterase 1A191395952913986370Rat
621822Slc6a2solute carrier family 6 member 2191401029214055317Rat
2325051Lpcat2lysophosphatidylcholine acyltransferase 2191408838914152742Rat
1583620Capns2calpain, small subunit 2191410433414105276Rat
41079993LOC120098543uncharacterized LOC120098543191415268914168272Rat
621316Mmp2matrix metallopeptidase 2191415465714182870Rat
41251642LOC120098544uncharacterized LOC120098544191418294614187957Rat
40944742LOC120098590uncharacterized LOC120098590191418845714198236Rat
11410986LOC108348898uncharacterized LOC108348898191420786414223664Rat
41362713LOC120098597uncharacterized LOC120098597191423314514238604Rat
1564830Irx6iroquois homeobox 6191433044014336403Rat
41303095LOC120098515uncharacterized LOC120098515191457940014587212Rat
1565518Irx5iroquois homeobox 5191463905214643911Rat
10398753Crndecolorectal neoplasia differentially expressed191464388714653880Rat
11438506Trnas-aga11transfer RNA serine (anticodon AGA) 11191469978714699867Rat
9415173LOC103694293FUN14 domain-containing protein 2 pseudogene191470626414706743Rat
40944643LOC120098513uncharacterized LOC120098513191479042414801441Rat
41370279Pbdc1-ps1polysaccharide biosynthesis domain containing 1, pseudogene 1191480144214807257Rat
40945959LOC120098593uncharacterized LOC120098593191488138814897369Rat
7497501LOC102555119uncharacterized LOC102555119191501392515018390Rat
1307424Irx3iroquois homeobox 3191521188215215323Rat
1305121FtoFTO, alpha-ketoglutarate dependent dioxygenase191528489815692142Rat
7661148LOC102556484uncharacterized LOC102556484191530716315311101Rat
7558266Rpl17-ps13ribosomal protein L17, pseudogene 13191541316715413687Rat
1311099Rpgrip1lRpgrip1-like191569218915785083Rat
1311170AktipAKT interacting protein191586681115877123Rat
3541Rbl2RB transcriptional corepressor like 2191587685215923632Rat
41323723LOC120098695small nucleolar RNA SNORA17191593431215934444Rat
1306795Chd9chromodomain helicase DNA binding protein 9191594153516146220Rat
11448883LOC108348876U1 small nuclear ribonucleoprotein C pseudogene191595711915960185Rat
1593026Mif-ps3macrophage migration inhibitory factor, pseudogene 3191626166116263204Rat
11478525LOC108348902uncharacterized LOC108348902191649266416500151Rat
11362355LOC108348901uncharacterized LOC108348901191650019716516868Rat
1591794Ldha-ps22lactate dehydrogenase A, pseudogene 22191653834216539830Rat
41023938LOC120098523uncharacterized LOC120098523191659814016642551Rat
1311529Tox3TOX high mobility group box family member 3191664833816757151Rat
7542010LOC102549475uncharacterized LOC102549475191700136617025361Rat
7532016LOC102549581uncharacterized LOC102549581191722091617225036Rat
40937786LOC120098536uncharacterized LOC120098536191722538217232395Rat
41254820LOC120098502uncharacterized LOC120098502191729079017291512Rat
41366286LOC120098701small nucleolar RNA SNORA17191735007517350206Rat
40952774LOC120098500uncharacterized LOC120098500191745648017457299Rat
7678927LOC102553117uncharacterized LOC102553117191745682517471003Rat
41111973LOC120098514uncharacterized LOC120098514191755814117583832Rat
41396074LOC120098563uncharacterized LOC120098563191759007517607147Rat
9301627LOC103694298uncharacterized LOC103694298191770945517769586Rat
7597669LOC102553444uncharacterized LOC102553444191786762617901672Rat
41064998Trnap-agg28transfer RNA proline (anticodon AGG) 28191792765617927730Rat
7738559LOC102553576uncharacterized LOC102553576191794803918008876Rat
1309916Sall1spalt-like transcription factor 1191800578218022705Rat
7505565LOC102557216uncharacterized LOC102557216191827991618287521Rat
1308346CyldCYLD lysine 63 deubiquitinase191831063218373696Rat
6491014Npm1-ps2nucleophosmin 1, pseudogene 2191833904218339497Rat
41168625LOC120098599uncharacterized LOC120098599191837558018379594Rat
1306368Nod2nucleotide-binding oligomerization domain containing 2191837972018422817Rat
1307787Snx20sorting nexin 20191843593518445108Rat
1308491Nkd1NKD inhibitor of WNT signaling pathway 1191847634418549380Rat
41024705LOC120098503uncharacterized LOC120098503191869833118710027Rat
1309891Brd7bromodomain containing 7191870879218737500Rat
619966Adcy7adenylate cyclase 7191874087518798924Rat
1309587Tent4bterminal nucleotidyltransferase 4B191880761618868969Rat
1308267Heatr3HEAT repeat containing 3191889247718930502Rat
1308816Cnep1r1CTD nuclear envelope phosphatase 1 regulatory subunit 1191893263118947667Rat
11438483LOC108348906uncharacterized LOC108348906191893444518941602Rat
1587042Mrto4-ps7mRNA turnover 4, ribosome maturation factor, pseudogene 7191904060819041095Rat
41104662LOC120098652basic proline-rich protein-like191910796619110624Rat
621664Zfp423zinc finger protein 423191911153819407371Rat
40998408LOC120098541uncharacterized LOC120098541191941918819443773Rat
1585876LOC680913hypothetical protein LOC680913191948424819509632Rat
7646717LOC102551322uncharacterized LOC102551322191950545119550814Rat
41165301LOC120098642uncharacterized LOC120098642191951463519519525Rat
1562813Cbln1cerebellin 1 precursor191960876319612572Rat
41306472LOC120098531uncharacterized LOC120098531191977859619788806Rat
7602258LOC102551515uncharacterized LOC102551515191978886119800730Rat
1587310Ybx1-ps23Y box binding protein 1, pseudogene 23191984957919851101Rat
11375248LOC10834896660S ribosomal protein L29 pseudogene191985805419858524Rat
41252508Glul-ps2glutamate-ammonia ligase, pseudogene 2191986461719865783Rat
40956731LOC120098616uncharacterized LOC120098616191994267219950040Rat
41373433LOC120098553uncharacterized LOC120098553191999827520000323Rat
1585808Rpl19-ps19ribosomal protein L19, pseudogene 19192003475320035336Rat
1585793Rps15a-ps3ribosomal protein S15a, pseudogene 3192005394420054336Rat
2321146Abhd10-ps1abhydrolase domain containing 10, depalmitoylase, pseudogene 1192005483620055779Rat
1587309Rpl36-ps5ribosomal protein L36, pseudogene192007053220070891Rat
41224445LOC120098692small nucleolar RNA SNORA17192013072520130852Rat
2321096Cct3-ps5chaperonin containing TCP1 subunit 3, pseudogene 5192014643420148027Rat
41320463LOC120098595uncharacterized LOC120098595192018968520195690Rat
1305179N4bp1Nedd4 binding protein 1192022281120273570Rat
7637652LOC102547741uncharacterized LOC102547741192035841420365813Rat
620449Siah1siah E3 ubiquitin protein ligase 1192037890820402512Rat
1305466Lonp2lon peptidase 2, peroxisomal192040747520499030Rat
41215232LOC120098751U6 spliceosomal RNA192046621920466325Rat
735100Abcc12ATP binding cassette subfamily C member 12192054929820621991Rat
2324816Npm1-ps18nucleophosmin 1, pseudogene 18192078548520786466Rat
41268452LOC120098533uncharacterized LOC120098533192080090120808057Rat
41214423LOC120098690small nucleolar RNA SNORA17192088486820884995Rat
620186Phkbphosphorylase kinase regulatory subunit beta192101371921210672Rat
41187483LOC120098663uncharacterized LOC120098663192102015021023136Rat
619898Itfg1integrin alpha FG-GAP repeat containing 1192121069721331285Rat
41323917LOC120098702small nucleolar RNA SNORA17192126084921260963Rat
1305310Neto2neuropilin and tolloid like 2192134429921418182Rat
41164894LOC120098645ice nucleation protein-like192138912621398346Rat
71001Dnaja2DnaJ heat shock protein family (Hsp40) member A2192149779221516904Rat
1305462Gpt2glutamic--pyruvic transaminase 2192152680021561314Rat
7714102LOC102548349uncharacterized LOC102548349192154702121554142Rat
41276456LOC120098665uncharacterized LOC120098665192158988221626464Rat
1308706RGD1308706similar to RIKEN cDNA 4921524J17192162639021653869Rat
2324604LOC100363129LRRGT00018-like192163229321650799Rat
7642644Rps11-ps2ribosomal protein S11, pseudogene 2192167532621675840Rat
1305801Mylk3myosin light chain kinase 3192168508521743587Rat
1311437Orc6origin recognition complex, subunit 6192175786721765638Rat
1589784Vps35VPS35 retromer complex component192176577121801620Rat
41258260LOC120098671U6 spliceosomal RNA192178002821780125Rat
9272283LOC103694302mitogen-activated protein kinase 4 pseudogene192181819721820544Rat
1333226Or7c19olfactory receptor family 7 subfamily C member 19192183241321834841Rat
41292314Ppp1cb-ps5protein phosphatase 1 catalytic subunit beta, pseudogene 5192184416921935356Rat
1587786LOC685989hypothetical protein LOC685989192190971921937396Rat
7680597LOC102554391uncharacterized LOC102554391192194104622072466Rat
1592207Septin7-ps5septin 7, pseudogene 5192203073022033259Rat
41391415LOC120098737small nucleolar RNA U3192215375522153962Rat
6500925LOC100909916trafficking protein particle complex subunit 2-like protein-like192217032722170897Rat
11447015LOC108348337uncharacterized LOC108348337192218490522189682Rat
7746684LOC102550225septin-7-like192229721722299537Rat
2323492Zc3hav1-ps2zinc finger CCCH-type containing, antiviral 1, pseudogene 2192234391522356408Rat
1584830LOC679711similar to RIKEN cDNA 5031410I06192236565222370450Rat
41392794LOC120098507igE-binding protein-like192238051822381798Rat
1596406LOC685291similar to spermatogenesis associated glutamate (E)-rich protein 4b192239534322439432Rat
41257688Zc3hav1-ps8zinc finger CCCH-type containing, antiviral 1, pseudogene 8192239588322397692Rat
41070523Ppp1cb-ps3protein phosphatase 1 catalytic subunit beta, pseudogene 3192245184522454193Rat
2318841Zc3hav1-ps1zinc finger CCCH-type containing, antiviral 1, pseudogene 1192245731422458889Rat
7544409LOC102552540uncharacterized LOC102552540192247128722475693Rat
41396011Polr2m-ps2RNA polymerase II subunit M, pseudogene 2192247816722483342Rat
1562660RGD1562660RGD1562660192250949722513925Rat
1359640LOC291863carboxylesterase-like192256068522592355Rat
41346441LOC120098583uncharacterized LOC120098583192260705822626254Rat
7613847LOC102557406carboxylesterase 1E-like192263212722637621Rat
1564453LOC501233LRRGT00080192264851922653372Rat
1565666Cesl1carboxylesterase-like 1192267070923006329Rat
41168099Zc3hav1-ps6zinc finger CCCH-type containing, antiviral 1, pseudogene 6192276965122771419Rat
41314711Zc3hav1-ps5zinc finger CCCH-type containing, antiviral 1, pseudogene 5192278106322782360Rat
7509687Ppp1cb-ps4protein phosphatase 1 catalytic subunit beta, pseudogene 4192279295522795089Rat
41235451LOC120098582disks large homolog 5-like192279999622804911Rat
7546549Zc3hav1-ps3zinc finger CCCH-type containing, antiviral 1, pseudogene 3192280973622811770Rat
41097078LOC120098581uncharacterized LOC120098581192281719222885981Rat
1596470LOC685226similar to spermatogenesis associated glutamate (E)-rich protein 4d192283534722839939Rat
1597757LOC685125similar to RIKEN cDNA 5031410I06192285219922922593Rat
41078009LOC120098580DNA-directed RNA polymerase II subunit GRINL1A-like192287891022880774Rat
11469687LOC108353199serine/threonine-protein phosphatase PP1-beta catalytic subunit pseudogene192290367722904690Rat
11497700LOC108353202disks large homolog 5-like192293511022939810Rat
11468427LOC108348220zinc finger CCCH-type antiviral protein 1 pseudogene192295988422963318Rat
41139117LOC120098585uncharacterized LOC120098585192297852122980208Rat
1593780Ppp1cb-ps6protein phosphatase 1 catalytic subunit beta, pseudogene 6192298007122984653Rat
41141743Zc3hav1-ps4zinc finger CCCH-type containing, antiviral 1, pseudogene 4192299450022996011Rat
41314813LOC120098586uncharacterized LOC120098586192299752823000324Rat
11384271LOC108353207uncharacterized LOC108353207192300217723004908Rat
2323544Zfp791zinc finger protein 791192301841823033580Rat
1306317Sec61g-ps1Sec61 translocon subunit gamma, pseudogene 1192303725023037626Rat
3039Man2b1mannosidase, alpha, class 2B, member 1192305509223074398Rat
1564058Wdr83osWD repeat domain 83 opposite strand192307537223076934Rat
1306947Wdr83WD repeat domain 83192307694823082569Rat
1303326Dhpsdeoxyhypusine synthase192308245423086544Rat
1592634Gng14G protein subunit gamma 14192308672923090140Rat
1307002Fbxw9F-box and WD repeat domain containing 9192309053423097439Rat
1310356Tnpo2transportin 2192309939823119696Rat
41239658Snord41small nucleolar RNA, C/D box 41192310667023106739Rat
1564093Trirtelomerase RNA component interacting RNase192312508323128502Rat
1307906Get3guided entry of tail-anchored proteins factor 3, ATPase192313010923138196Rat
1305377Best2bestrophin 2192314160223148351Rat
1310171Hook2hook microtubule-tethering protein 2192315186923170139Rat
2944JunbJunB proto-oncogene, AP-1 transcription factor subunit192317626523178049Rat
3838Prdx2peroxiredoxin 2192318092723186217Rat
1307248Rnaseh2aribonuclease H2, subunit A192318632523196045Rat
41288257Thsd8thrombospondin type 1 domain containing 8192318639423188323Rat
1308534Rtbdnretbindin192319750623205544Rat
631372MAST1microtubule associated serine/threonine kinase 1192321641823244224Rat
4888555Mir3550microRNA 3550192322864123228754Rat
621457Dnase2deoxyribonuclease 2, lysosomal192324466123247329Rat
1309398Klf1KLF transcription factor 1192325062723253802Rat
1308829Gcdhglutaryl-CoA dehydrogenase192326321523269689Rat
1311867Syce2synaptonemal complex central element protein 2192326623623291265Rat
1310314Farsaphenylalanyl-tRNA synthetase subunit alpha192329140923300985Rat
620288Calrcalreticulin192330852523313420Rat
1309899Rad23aRAD23 homolog A, nucleotide excision repair protein192331356323320702Rat
1309249Gadd45gip1GADD45G interacting protein 1192332066223323211Rat
1590249Dand5DAN domain BMP antagonist family member 5192333091723340486Rat
69080Nfixnuclear factor I X192335538823450360Rat
7728552LOC102546551uncharacterized LOC102546551192341900023429171Rat
41281082LOC120098485uncharacterized LOC120098485192343034223432362Rat
1359244Lyl1LYL1, basic helix-loop-helix family member192345214023455007Rat
41099650LOC120098486uncharacterized LOC120098486192345521123456949Rat
1305992Trmt1tRNA methyltransferase 1192345675623471581Rat
621003Nacc1nucleus accumbens associated 1192346868823486528Rat
1359581Ier2immediate early response 2192349455123496075Rat
2244Cacna1acalcium voltage-gated channel subunit alpha1 A192352074123819971Rat
41186779LOC120098529uncharacterized LOC120098529192368508923692190Rat
41157836LOC120098528uncharacterized LOC120098528192375617123765014Rat
2323655LOC100359539ribonucleotide reductase M2 polypeptide192387938323881961Rat
1307598Yju2bYJU2 splicing factor homolog B192389458723906084Rat
1307789Mri1methylthioribose-1-phosphate isomerase 1192390733523913320Rat
735128LOC288913similar to LEYDIG CELL TUMOR 10 KD PROTEIN192391496523919149Rat
41184329LOC120098489uncharacterized LOC120098489192392715923929994Rat
1308020Zswim4zinc finger, SWIM-type containing 4192392784523952970Rat
2325349Mir24-2microRNA 24-2192395468323954790Rat
2325592Mir27amicroRNA 27a192395483123954917Rat
2325395Mir23amicroRNA 23a192395499723955071Rat
7615626LOC102548759uncharacterized LOC102548759192396500023971784Rat
41163434LOC120098490uncharacterized LOC120098490192397238623975367Rat
1306672Nanos3nanos C2HC-type zinc finger 3192397846523988933Rat
2325381Mir181cmicroRNA 181c192398352323983628Rat
2325361Mir181dmicroRNA 181d192398370623983788Rat
1306072Brme1break repair meiotic recombinase recruitment factor 1192399004924011774Rat
1306108Cc2d1acoiled-coil and C2 domain containing 1A192401189724026937Rat
1307753Podnl1podocan-like 1192402726124033965Rat
1304881Dcaf15DDB1 and CUL4 associated factor 15192405392524061277Rat
1306574Rfx1regulatory factor X1192406133624092044Rat
14398579Mir709microRNA mir-709192407280624072898Rat
7720115LOC102555451uncharacterized LOC102555451192409259624100673Rat
41064138LOC120098557uncharacterized LOC120098557192410689824109997Rat
628745Rln3relaxin 3192410740124109432Rat
1305029Il27rainterleukin 27 receptor subunit alpha192410969824121977Rat
2323602Palm3paralemmin 3192412198424126079Rat
1310262Misp3MISP family member 3192413999824142006Rat
7489012Mir1199microRNA 1199192414057524140694Rat
6486004LOC100912606uncharacterized LOC100912606192414460924150482Rat
1586683LOC686013hypothetical protein LOC686013192414692124150983Rat
7529921Samd1sterile alpha motif domain containing 1192415113624154475Rat
3389Prkacaprotein kinase cAMP-activated catalytic subunit alpha192415508124178430Rat
41202626LOC120098559uncharacterized LOC120098559192417470824192464Rat
1304918Asf1banti-silencing function 1B histone chaperone192418102424195604Rat
620768Adgrl1adhesion G protein-coupled receptor L1192420240524244137Rat
41147714LOC120098560uncharacterized LOC120098560192420821024208735Rat
41388122LOC120098752U6 spliceosomal RNA192432201524322118Rat
1305595Adgre5adhesion G protein-coupled receptor E5192439797224418648Rat
41334016Trnaa-agc20transfer RNA alanine (anticodon AGC) 20192441526024415332Rat
619920Ddx39aDExD-box helicase 39A192441874324427422Rat
41210962LOC120098747U6 spliceosomal RNA192442848524428591Rat
41178000LOC120098561uncharacterized LOC120098561192444053724444983Rat
69308Pkn1protein kinase N1192444213024470107Rat
3434Ptger1prostaglandin E receptor 1192447025824473687Rat
68338Gipc1GIPC PDZ domain containing family, member 1192447429124487083Rat
41364357Cycs-ps8cytochrome c, somatic, pseudogene 8192449911024500701Rat
1564580Rps10-ps10ribosomal protein S10, pseudogene 10192450114524501984Rat
1304725Dnajb1DnaJ heat shock protein family (Hsp40) member B1192452271724526458Rat
620376Tecrtrans-2,3-enoyl-CoA reductase192452670524568168Rat
1588853Rps2-ps7ribosomal protein S2, pseudogene 7192453262624533466Rat
1308550Ndufb7NADH:ubiquinone oxidoreductase subunit B7192456824124572579Rat
7639712Rpl29-ps17ribosomal protein L29, pseudogene 17192457466424575452Rat
1588804Rps2-ps11ribosomal protein S2, pseudogene 11192458466824585542Rat
1588791Rps2-ps25ribosomal protein S2, pseudogene 25192459595324599858Rat
1333116Or10k2olfactory receptor family 10 subfamily K member 2192460201924602963Rat
1311860Scocshort coiled-coil protein192465965124689236Rat
1592643Clgncalmegin192469514024728542Rat
1310572Mgat4dMGAT4 family, member D192474006824777012Rat
1587598Elmod2ELMO domain containing 2192478616624805626Rat
3931Ucp1uncoupling protein 1192480878224816853Rat
1308221Tbc1d9TBC1 domain family member 9192484216624951383Rat
11358650LOC108348918uncharacterized LOC108348918192490969324925713Rat
7690199LOC102554553uncharacterized LOC102554553192495274524958115Rat
1304572Rnf150ring finger protein 150192500697825229273Rat
41014607LOC120098554uncharacterized LOC120098554192519944825209488Rat
11474432LOC108348974uncharacterized LOC108348974192528969425301168Rat
41316782LOC120098487uncharacterized LOC120098487192530601225313603Rat
1307510Zfp330zinc finger protein 330192531365525324958Rat
1587307Eif2s1-ps2eukaryotic translation initiation factor 2 subunit alpha, pseudogene 2192541230925413479Rat
1585295LOC688712similar to ribosomal protein L22 like 1192542082225421388Rat
11428350LOC108348923uncharacterized LOC108348923192542649525436109Rat
2887Il15interleukin 15192564001325706818Rat
620470Inpp4binositol polyphosphate-4-phosphatase type II B192592018926670085Rat
9145556Smarce1-ps6SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, pseudogene 6192612829226131416Rat
41402383LOC120098729U2 spliceosomal RNA192642919226429345Rat
1565102Rps15-ps8ribosomal protein S15, pseudogene 8192664190526650112Rat
1311974Usp38ubiquitin specific peptidase 38192700604627037449Rat
1583003Rpl35-ps11ribosomal protein L35, pseudogene 11192712109727121489Rat
1311085Gab1GRB2-associated binding protein 1192713126227239236Rat
41112025LOC120098604uncharacterized LOC120098604192714050927149999Rat
40973828LOC120098602uncharacterized LOC120098602192717508827178216Rat
1308832Smarca5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5192727191827304594Rat
1562701Frem3FRAS1 related extracellular matrix 3192730846927366771Rat
1582935Gypaglycophorin A192745031127465940Rat
9151310LOC103694973uncharacterized LOC103694973192761240027629804Rat
1564108HhipHedgehog-interacting protein192786368427952528Rat
7578796LOC102549584uncharacterized LOC102549584192805103528075585Rat
1308936Anapc10anaphase promoting complex subunit 10192815229928205552Rat
1305301Abce1ATP binding cassette subfamily E member 1192820556628230489Rat
11468429LOC108348925small nuclear ribonucleoprotein G pseudogene192821034428212718Rat
40991131LOC120098633uncharacterized LOC120098633192821608428220114Rat
1305606Otud4OTU deubiquitinase 4192823671328279815Rat
1597608Gapdh-ps8Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 8192835548328356270Rat
7549007LOC102549652uncharacterized LOC102549652192837776228385051Rat
6495903Nt5c2-ps15'-nucleotidase, cytosolic II, pseudogene 1192841423828424767Rat
2322909Mrps36-ps3mitochondrial ribosomal protein S36, pseudogene 3192849490828495203Rat
3030Smad1SMAD family member 1192851313028573665Rat
1305035Mmaametabolism of cobalamin associated A192861906028649319Rat
7707469LOC102550010uncharacterized LOC102550010192865588228704532Rat
1561806LOC498933LOC498933192866905928704512Rat
1560620Zfp827zinc finger protein 827192872056828887381Rat
41322043LOC120098577uncharacterized LOC120098577192892691528940920Rat
1561937Lsm6LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated192909825429112858Rat
41160673Reeld1reeler domain containing 1192914189829159970Rat
41167744LOC120098738U4 spliceosomal RNA192914193029142070Rat
1564388Slc10a7solute carrier family 10, member 7192918314329407470Rat
40944694Rpl28-ps5ribosomal protein L28, pseudogene 5192931088529316984Rat
1306751Rbmxl1Rbmx like 1192940790229411519Rat
7700714LOC10255066860S ribosomal protein L21-like192945683829457305Rat
620075Pou4f2POU class 4 homeobox 2192948668629490327Rat
1589777Ttc29tetratricopeptide repeat domain 29192953170729750635Rat
11402022LOC10834888140S ribosomal protein S25 pseudogene192976874529769406Rat
1592274Ap3s1-ps2adaptor related protein complex 3 subunit sigma 1, pseudogene 2192981927629820542Rat
1587348Nsa2-ps15NSA2 ribosome biogenesis factor, pseudogene 15193003515830035929Rat
41237132LOC120098673U7 small nuclear RNA193004933630049401Rat
41343011LOC120098687small nucleolar RNA SNORA17193016270530162832Rat
40966524LOC120098594uncharacterized LOC120098594193019709130198483Rat
2535Ednraendothelin receptor type A193023354030303727Rat
7610034LOC102552779uncharacterized LOC102552779193028704930345197Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
33917D19Mit4257191560502315605265Ratregion
11471D19Mit9149192481604124816202Ratregion
11472D19Wox8111192481797824818103Ratregion
33597D19Mit13197192468134024681546Ratregion
33698D19Mit12136191896158218961714Ratregion
33741D15Mit4201192605267726052794Ratregion
36165D19Rat13227192306926523069484Ratregion
35376D19Rat12178192570467125704884Ratregion
37668D19Rat42231192069611320696349Ratregion
35747D19Rat26168191970939619709566Ratregion
35775D19Rat27135191857978518579915Ratregion
35881D19Rat11128192968965629689776Ratregion
35959D19Rat15160191432468814324854Ratregion
39760D19Rat93239191954154819541787Ratregion
38008D19Rat39249191935220919352458Ratregion
38032D19Rat101203191511459815114789Ratregion
38242D19Rat41161192629651126296662Ratregion
38298D19Rat48179192702113127021310Ratregion
38302D19Rat52164191456772514567885Ratregion
40512D19Rat76157192457578424575943Ratregion
40648D19Rat77226192019759820197835Ratregion
38502D19Rat44141191514895115149088Ratregion
38540D19Rat55210191484453914844749Ratregion
40098D19Rat94173191406267514062848Ratregion
38808D19Rat54203192515071125150917Ratregion
39018D19Rat29206192932249029322676Ratregion
39074D19Rat31200191909853219098733Ratregion
39300D19Rat40200193010343730103633Ratregion
39466D19Rat73247192158502321585279Ratregion
42058D19Arb8265192481311624813393Ratregion
42058D19Arb8265192481311624813393Ratregion
41312D19Rat78309191442105914421354Ratregion
42428D19Rat124210192905967329059881Ratregion
40950D19Rat74130192444825124448377Ratregion
40998D19Rat75208192395622423956428Ratregion
41714D19Rat109126193006321930063337Ratregion
41768D19Rat96208192086060220860801Ratregion
43127D19Rat122213191517895315179140Ratregion
43128D19Rat115201191473348414733670Ratregion
43129D19Rat113238191694793416948168Ratregion
43130D19Rat112221192333737423337588Ratregion
43131D19Rat120200192618261526182815Ratregion
43132D19Rat110227192735660227356819Ratregion
45601D19Got11160191420491514205075Ratregion
45602D19Got13267191432458514324852Ratregion
45603D19Got6213191535323515353448Ratregion
45604D19Got7209191576412715764336Ratregion
45606D19Got14168192843871428438882Ratregion
45607D19Got16158192849407628494234Ratregion
45609D19Got17157192849407628494234Ratregion
60781D19Wox3124192753020727530329Ratregion
60745D19Rat111221192039314420393369Ratregion
60183D19Got19198192628389826284096Ratregion
60184D19Got20140192381524523815383Ratregion
60185D19Got21208192423328724233495Ratregion
60191D19Got8176191730959617309770Ratregion
66638D19Mco1243192163368521633932Ratregion
1630110D19Got132152192350708023507232Ratregion
1630831D19Got107123192048831520488438Ratregion
1628220D19Got129180191896154018961720Ratregion
1629249D19Got105158192524194525242103Ratregion
1632729D19Got116141192940606029406201Ratregion
1633117D19Got10205191895738918957596Ratregion
1633237D19Got117181192334934323349535Ratregion
1639793D19Got103234191989019119890420Ratregion
1635357D19Got134144191950739919507540Ratregion
1635573D19Got104154191854798618548140Ratregion
1637212D19Got106146192082946420829610Ratregion
7206032Pou4f291192948771529487806Ratregion
7205930Ppp1cb130192298244722982577Ratregion
7205932Ppp1cb462192298221822982680Ratregion
5035891PMC293425P1731191789962517899758Ratregion
5035891PMC293425P1731191789978017899940Ratregion
5036095Cacna1a383192352875523529138Ratregion
7206610Irx31503191521380915215312Ratregion
7206660Klf1150192325294223253676Ratregion
5039296RH127625204192723874327238947Ratregion
5036468Ptger1148192447076924470917Ratregion
5039104RH127515201191955004219550243Ratregion
5036683AU048865212191607998716080201Ratregion
5033899RH140541121192815306228153183Ratregion
5026030RH130639209191955869819558907Ratregion
7206160Irx380191521332215213402Ratregion
7206162Irx51201191464047714641678Ratregion
5028713A009S35148191881200218812150Ratregion
5031568AU047895161192805742128057582Ratregion
5034269RH142002189192409284124093033Ratregion
5026298RH131676183192414172724141910Ratregion
5029063RH143375191192815363028153836Ratregion
5031832AU047006137192655126526551402Ratregion
5034442BE118125177192872106928721246Ratregion
5026488RH132403214192911201229112226Ratregion
5029121RH143601126192409206824092194Ratregion
5026636RH132966195192293952822939721Ratregion
5026678RH133120187191613004416130231Ratregion
5029375RH144557188191466556014665748Ratregion
5026916RH134027192192447548424475676Ratregion
5026922RH134051190191535115215351341Ratregion
5026940RH134118184192175795821758142Ratregion
5032641RH134758194192152704921527243Ratregion
5027365AI385626103192481661224816715Ratregion
5027367AI894186144191521351415213658Ratregion
5032831RH136650197192037960620379803Ratregion
5032967RH137139210192133099921331209Ratregion
5033013RH137276206192326942623269632Ratregion
5024962Smad1351192853969628540047Ratregion
5033131RH137711204192469589224696097Ratregion
5033151RH137786201191587770715877910Ratregion
5033177RH137868125192315202123152146Ratregion
5027809RH94828100192481508224815182Ratregion
502785913.MMHAP80FLE1.seq186192517150425171690Ratregion
502785913.MMHAP80FLE1.seq186192517150425171690Ratregion
5030419BE112852168191588236815882536Ratregion
5033327RH138429139192857303728573176Ratregion
5033333RH138451124191803553918035663Ratregion
5025330RH127903215193029675530296970Ratregion
5033375RH138607219192623674126236960Ratregion
5033429RH138801124192174276721742891Ratregion
5033479RH138983184192026931320269497Ratregion
5025550RH128754150192409541324095563Ratregion
5025682RH129252150192040749420407644Ratregion
5028293D8Mit162146192949547129495617Ratregion
5028297D8Mit30765191731535517315420Ratregion
5030909BI302228156192790026027900416Ratregion
5033723RH139880180191521500215215182Ratregion
5033841RH140318131191408838314088514Ratregion
5028490AU04119394192152705421527148Ratregion
5052049RH94810115192415545124155566Ratregion
5054965RH143527243192447093124471174Ratregion
5051282RH134544211192327052823270739Ratregion
5051451AI852433145192309976423099909Ratregion
5051453AI647796134192180127921801413Ratregion
5053615RH142751132192170113121701263Ratregion
5056483RH144404216192103615921036375Ratregion
5051755RH94640165192481552424815690Ratregion
5053775RH142844144192795235327952497Ratregion
5053925RH142930232192856948828569719Ratregion
5056781RH144576150191588074715880897Ratregion
5051957RH94757160192853952128539681Ratregion
5054463RH143238136192326327323263409Ratregion
5056205RH144244181192312006723120248Ratregion
5052412AI449692229192823682128237050Ratregion
5058172BF386739202192447486824475070Ratregion
5059750BE103144150192785984027859990Ratregion
5058214BF386808156192497624924976405Ratregion
5058518BI290655194191722116517221359Ratregion
5050338RH133999198192320651423206714Ratregion
5053351RH142598119192730865427308773Ratregion
5054105RH143033145192374597423746369Ratregion
5054105RH143033145192374622423746369Ratregion
5054147RH143057202191594320215943404Ratregion
5054385RH143194124192623682326236947Ratregion
5054465RH143240125191894253018942655Ratregion
5053177RH142498131192392062423920755Ratregion
5053233RH142530162191960988719610049Ratregion
5051747RH94635182192570662225706804Ratregion
5051062RH134416207192332045123320658Ratregion
5040794RH128487212191847476818474981Ratregion
5043516RH130070203191893278318932986Ratregion
5044568RH130678187191520462815204815Ratregion
5044574RH130682199192441365924413865Ratregion
5044908RH130872188191415476314154951Ratregion
5041472RH128876187192395386723954054Ratregion
5044144RH130435220192857322028573440Ratregion
5045980RH131490215192468899624689211Ratregion
5046094RH131555211191889255618892767Ratregion
5041898RH129122190192815234328152533Ratregion
5046282RH131663197192324402123244218Ratregion
5046284RH131664218192174329221743510Ratregion
5045352RH131128150192309760423097754Ratregion
5046486RH131781212192345686023457188Ratregion
5046528RH131805183192410040624100589Ratregion
5046544RH131814219192406142624061645Ratregion
5047430RH132323186192872073928720925Ratregion
5048874RH133155215192320699823207213Ratregion
5047922RH132606203192314806523148268Ratregion
5049316RH133410182192259200722592189Ratregion
5046984RH132067200192447256224472761Ratregion
5048192RH132761198192309089523091171Ratregion
5048340RH132847183191588636815886551Ratregion
5049692RH133626209192922616629226374Ratregion
5049778RH133676206192398779123987997Ratregion
5047104RH132135196192308555923085755Ratregion
5047126RH132148217192402737624027593Ratregion
5042176RH129284161192313792423138085Ratregion
5042588RH129525199191534942115349620Ratregion
5048570RH132979208191781344717813655Ratregion
5049592RH133569203192795896927959172Ratregion
5040080RH128078219192415524724155471Ratregion
5040438RH128283203192823009128230294Ratregion
5043044RH129796203192500040925000612Ratregion
5039792RH127909203192570645225706655Ratregion
7191220D19Mit9160192481604224816202Ratregion
5040598RH128375198192387960223879800Ratregion
5042882RH129701150192532474125324891Ratregion
5074958RH138317197191410370414103901Ratregion
5073848RH137673215192921749829217713Ratregion
5073952RH137733160192364290723643067Ratregion
5072244RH136737120191590694415907064Ratregion
5076972RH139485174191408838314088557Ratregion
5074986RH138333213191578227015782483Ratregion
5075618RH138698145192795235127952496Ratregion
5077458RH139768215191408991414090129Ratregion
5077636RH139870204192456678824567167Ratregion
5079548RH141061220192911315529113375Ratregion
5079592RH141089215193029567630295891Ratregion
5077852RH139997184192876547828765662Ratregion
5079770RH141193182192745055827450740Ratregion
5079854RH141241180192290963822909732Ratregion
5079854RH141241180192291486622914960Ratregion
5078980RH140664189192447048924470678Ratregion
5079210RH140799171192319777823197949Ratregion
5070946RH134797187192703694027037127Ratregion
5071064RH134865217192724992227250139Ratregion
5080454RH141588194191401355714013751Ratregion
5080500RH141614196191606043016060626Ratregion
5078624RH140451139192026979320269932Ratregion
5078850RH140588219192355789523558114Ratregion
5071482RH135107200192716168027161880Ratregion
5070714RH134662186192484232724842513Ratregion
5071740RH135257219191411382014114039Ratregion
5073886RH137695183192502786925028052Ratregion
5070924RH134785197191512250815122705Ratregion
5073188RH137291183192956333429563517Ratregion
5073192RH137293216192388070723880923Ratregion
5072022RH135420190191397015813970346Ratregion
5072110RH136656182191831428518314467Ratregion
5072110RH136656182191831428518314467Ratregion
5074334RH137957202192446758224467784Ratregion
5071240RH134968208192953183929532047Ratregion
5067394AU047778232192322790223228134Ratregion
5067676AU047602235192936232229362552Ratregion
5067716AU047579233192305983523060066Ratregion
5068416AU047158143191439220114392344Ratregion
5069950AU028726119191573360015733719Ratregion
5070059RH94446169192447026124470430Ratregion
5070197RH9452874192480880224808876Ratregion
5070197RH9452874192480880224808876Ratregion
5069744AU029195144192616130326161447Ratregion
5069256AU046616277192725993427260150Ratregion
5069268AU046608248192468073724680813Ratregion
5065174BE121076187192865674528656932Ratregion
5060450BE110092167191420619214206359Ratregion
5060554BE110336214191568789915688113Ratregion
5063886BE120169167191553148915531656Ratregion
5064022BE120467150191589411215894262Ratregion
5062748AW534219206192933479729335003Ratregion
5063134BI295974157191564624515646402Ratregion
5066334PMC152658P5498192317675223177250Ratregion
5061358BE105057160191594222215942382Ratregion
5066470AU048337256192289580322895835Ratregion
5061606BF396845123191556810015568223Ratregion
5061636BE105708184191412122914121413Ratregion
5087448PMC18111P1150191415484314154993Ratregion
5082851BF3902630192716530927165462Ratregion
5087488PMC207566P3234192388105923881293Ratregion
5087536PMC302098P1420192317655023176970Ratregion
5089153AU048986107192467838324678420Ratregion
5088235AU048447217191480739814807615Ratregion
5089445AU049160173191731234417312515Ratregion
5087836Eif2a309192541265925412966Ratregion
5088005Mem3165192180131621801481Ratregion
5088533AU048626298191747412217474418Ratregion
5081182RH142012210191587671815876928Ratregion
5081404AI501448193191587175015871943Ratregion
5080768RH141770185192789037327890558Ratregion
5083601BI282960211192456714624567622Ratregion
5081735AW434310157191609274716092904Ratregion
5503883CES2151191392688213927033Ratregion
5504226RH47686139191802248918022628Ratregion
5503577UniSTS:464655113191961138119611494Ratregion
5504356D16S2710142191817732118177463Ratregion
5504324D16S2601E132192151429021514554Ratregion
5505245Olfr370537192460224524602782Ratregion
5505255Gpsn2206192456757924568023Ratregion
5506068UniSTS:4982971521192821650528218026Ratregion
5506326UniSTS:474756318192338343523383753Ratregion
5506427UniSTS:479241540192941071229411252Ratregion
5506847G46506173191531415115314324Ratregion
5507309fc03d10.x10191647600916476122Ratregion
5507309fc03d10.x10191647602116476122Ratregion
5507027fk81g07.x1974192516846525169439Ratregion
5506941G32820148191881200218812150Ratregion
5499985UniSTS:235961230191882562518825855Ratregion
5501379Klf11558192325081223252370Ratregion
5500456AA55556448192715710627157155Ratregion
5499979UniSTS:235942241192716396027164201Ratregion
5499983UniSTS:235937211192911245329112664Ratregion
5499975UniSTS:235940201192823601928236220Ratregion
5500513RH135836400192406240724062807Ratregion
5500829STS-Z407031034192765877827659812Ratregion
5501301STS-F04943547192587864925879196Ratregion
5501265PMC18620P1262192417439924174661Ratregion
5501456Ucp1196192481577424816631Ratregion
5501251PMC166143P297192982035729820454Ratregion
5504424PMC199184P1718192447157824472296Ratregion
5504452PMC209534P1666192447163224472298Ratregion
5504654PMC327192P3829192447141624472245Ratregion
5504924Irx551191463922114639272Ratregion
5505204Cbln11405191960922319610628Ratregion
5501546WI-11812143192981938629819529Ratregion
5501822MARC_14423-14424:1010076472:1400192040090020401300Ratregion
5502188MARC_7999-8000:996688236:1190192307569223076455Ratregion
5502377RH1246471147192326906223270209Ratregion
5502255AI173355117192456743124567631Ratregion
Position Markers

Flank 1: (Ces1c)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21913,926,401 - 13,955,527 (+)NCBI
mRatBN7.2 Ensembl1913,926,260 - 13,955,524 (+)Ensembl
UTH_Rnor_SHR_Utx1915,622,205 - 15,650,818 (+)NCBI
UTH_Rnor_SHRSP_BbbUtx_1.01920,816,969 - 20,845,585 (+)NCBI
UTH_Rnor_WKY_Bbb_1.01923,762,552 - 23,791,164 (+)NCBI
Rnor_6.01915,294,524 - 15,335,005 (+)NCBI
Rnor_6.0 Ensembl1915,081,158 - 15,335,002 (+)Ensembl
Rnor_5.01926,391,608 - 26,431,928 (+)NCBI
RGSC_v3.41914,981,499 - 15,021,203 (+)NCBI
RGSC_v3.11914,986,402 - 15,025,950 (+)NCBI
Celera1913,863,624 - 13,879,860 (+)NCBI
Cytogenetic Map19p11NCBI
Peak: (D19Mit2)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21912,305,720 - 12,305,899 (+)MAPPER
Rnor_6.01913,190,216 - 13,190,394NCBI
Rnor_5.01924,303,515 - 24,303,693UniSTS
RGSC_v3.41912,756,973 - 12,757,152RGD
RGSC_v3.41912,756,974 - 12,757,152UniSTS
RGSC_v3.11912,761,713 - 12,762,125RGD
Celera1912,178,412 - 12,178,598UniSTS
RH 3.4 Map19585.6UniSTS
RH 3.4 Map19585.6RGD
RH 2.0 Map19607.0RGD
Cytogenetic Map19 RGD
Flank 2: (Ednra)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21930,233,540 - 30,303,727 (+)NCBI
mRatBN7.2 Ensembl1930,233,571 - 30,297,049 (+)Ensembl
UTH_Rnor_SHR_Utx1937,065,939 - 37,130,121 (+)NCBI
UTH_Rnor_SHRSP_BbbUtx_1.01937,719,814 - 37,783,991 (+)NCBI
UTH_Rnor_WKY_Bbb_1.01939,968,901 - 40,033,091 (+)NCBI
Rnor_6.01933,928,356 - 33,991,703 (+)NCBI
Rnor_6.0 Ensembl1933,928,356 - 33,991,703 (+)Ensembl
Rnor_5.01944,812,252 - 44,874,904 (+)NCBI
RGSC_v3.41932,042,366 - 32,108,153 (+)NCBI
RGSC_v3.11932,051,058 - 32,110,066 (+)NCBI
Celera1929,719,589 - 29,778,843 (+)NCBI
Cytogenetic Map19q11NCBI


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
7411590Foco7Food consumption QTL 76.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)19124688055Rat
10054132Srcrt9Stress Responsive Cort QTL 92.870.0017blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)19127355345Rat
631678Cm9Cardiac mass QTL 94.270.0001aorta mass (VT:0002845)aorta weight (CMO:0000076)19128982497Rat
631681Cm12Cardiac mass QTL 123.330.00053heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)19128982497Rat
1549847Bss8Bone structure and strength QTL 84lumbar vertebra strength trait (VT:0010574)vertebra ultimate force (CMO:0001678)19131963836Rat
9590298Uminl5Urine mineral level QTL 53.590.001urine mineral amount (VT:0015086)urine electrolyte level (CMO:0000593)19136824771Rat
8552935Pigfal10Plasma insulin-like growth factor 1 level QTL 105.7blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)19136824771Rat
9590250Scort11Serum corticosterone level QTL 1123.450.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)19136824771Rat
9590090Insglur8Insulin/glucose ratio QTL 810.810.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)19136824771Rat
9589102Slep13Serum leptin concentration QTL 134.630.001blood leptin amount (VT:0005667)plasma leptin level (CMO:0000781)1956937445569374Rat
8694186Bw152Body weight QTL 1523.340.001body mass (VT:0001259)body weight gain (CMO:0000420)1956937445569374Rat
7247442Uae39Urinary albumin excretion QTL 39urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19218792746708701Rat
724566Uae12Urinary albumin excretion QTL 125urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19218792756457239Rat
61447Tcas1Tongue tumor susceptibility QTL 16.08tongue integrity trait (VT:0010553)squamous cell carcinoma of the tongue maximum tumor diameter (CMO:0001875)19231612147316121Rat
2317848Alcrsp21Alcohol response QTL 211.8999999761581420.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)19320477748204777Rat
1331737Uae29Urinary albumin excretion QTL 295.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)19409615555283277Rat
724518Uae19Urinary albumin excretion QTL 195.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)19745724942983518Rat
724565Tcas5Tongue tumor susceptibility QTL 510.04tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)19997775339654489Rat
631840Niddm38Non-insulin dependent diabetes mellitus QTL 383.86blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)191032318023069265Rat
61423Cia14Collagen induced arthritis QTL 143joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)191082797043544039Rat
61407Scl12Serum cholesterol level QTL 120.001blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)191392640130303727Rat
1558656Prcs1Prostate cancer susceptibility QTL 15prostate integrity trait (VT:0010571)percentage of study population developing ventral prostate tumorous lesions during a period of time (CMO:0000943)191511459834521833Rat
7411549Bw130Body weight QTL 13050.001body mass (VT:0001259)body weight gain (CMO:0000420)191545586057337602Rat
1331788Rf45Renal function QTL 452.818kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)191560502346559041Rat
1578764Stresp19Stress response QTL 193.60.001blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)191563020157337602Rat
2298478Eau8Experimental allergic uveoretinitis QTL 80.0163uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)191715443357337602Rat
61350Bp32Blood pressure QTL 320.012arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)192048357557337602Rat
61328Eae8Experimental allergic encephalomyelitis QTL 84nervous system integrity trait (VT:0010566)percentage of study population developing experimental autoimmune encephalomyelitis during a period of time (CMO:0001047)192481604133061905Rat
1549835Tcas7Tongue tumor susceptibility QTL 70.001tongue integrity trait (VT:0010553)squamous cell carcinoma of the head and neck tumor number (CMO:0001876)192481797839654489Rat
1354600Salc2Saline consumption QTL 29.910.001drinking behavior trait (VT:0001422)saline drink intake rate (CMO:0001627)192753020737947399Rat
1354607Gmadr1Adrenal mass QTL 15.83adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)192753020737947399Rat
1354633Bw28Body weight QTL 286.04body mass (VT:0001259)body weight (CMO:0000012)192753020737947399Rat
724546Kidm3Kidney mass QTL 33.1kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)192932249057337602Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Scl12


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2003-08-26 Scl12  Serum cholesterol level QTL 12  Lil1  Lipid Level QTL 1  Symbol and Name status set to provisional 632217 PROVISIONAL

RGD Curation Notes
Note Type Note Reference
qtl_gene Lcat gene is in the vicinity of the peak marker and could be a candidate gene 61079
qtl_general associates with lower level of HDL2 cholesterol in SHR/Ola than that in BN-Lx 61079