Bp48 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Bp48 (Blood pressure QTL 48) Rattus norvegicus

Symbol: Bp48
Name: Blood pressure QTL 48
RGD ID: 61384
Trait: arterial blood pressure trait   (VT:2000000)    
Measurement Type: systolic blood pressure   (CMO:0000004)    
LOD Score: 19.4
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21860,622,311 - 77,209,844RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01862,805,406 - 80,696,375RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01861,991,738 - 79,748,387RGDRnor5.0
RGSC_v3.41863,595,606 - 80,370,517RGDRGSC3.4
RGSC_v3.11863,714,065 - 80,444,102RGD
Cross Type: intercross
Strains Crossed: BB/OK SHR/Mol 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View
hypertension  (IDA)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
BB/OK  (IEA)
SHR/Mol  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Novel quantitative trait loci for blood pressure and related traits on rat chromosomes 1, 10, and 18. Kovacs P, etal., Biochem Biophys Res Commun 1997 Jun 18;235(2):343-8

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
2715GnalG protein subunit alpha L186062231160762599Rat
41249766Fam136a-ps3family with sequence similarity 136, member A, pseudogene 3186062292560631357Rat
41315866LOC120098241uncharacterized LOC120098241186063690560660960Rat
40940698LOC120098414U2 spliceosomal RNA186065208560652252Rat
7694763LOC102551836uncharacterized LOC102551836186067679260692718Rat
41224917LOC120098242uncharacterized LOC120098242186070732560711524Rat
1593500Chmp1bcharged multivesicular body protein 1B186074034960742879Rat
1309184Mppe1metallophosphoesterase 1186076341860781553Rat
628692Impa2inositol monophosphatase 2186083420660867575Rat
41306054LOC120098339uncharacterized LOC120098339186083857560844484Rat
1305106Cideacell death-inducing DFFA-like effector a186089491760920485Rat
1305887Tubb6tubulin, beta 6 class V186094339460953031Rat
1305259Afg3l2AFG3 like matrix AAA peptidase subunit 2186095426860999110Rat
41132838LOC120098259uncharacterized LOC120098259186095927460961550Rat
1582858Prelid3aPRELI domain containing 3A186099889861034821Rat
9158344LOC103694268cytochrome b-c1 complex subunit 7 pseudogene186100109961001697Rat
11479093LOC108353173heterogeneous nuclear ribonucleoprotein A3 pseudogene186102871661033474Rat
1305892Spire1spire-type actin nucleation factor 1186104129061171670Rat
41103344LOC120098357U1 spliceosomal RNA186104474161044905Rat
1305183Cep76centrosomal protein 76186117451461208512Rat
1304867Psmg2proteasome assembly chaperone 2186120866961227671Rat
620710Ptpn2protein tyrosine phosphatase, non-receptor type 2186122901261294662Rat
9366255LOC103694233thymosin beta-10 pseudogene186133109661332947Rat
1562797Cep192centrosomal protein 192186134695761458405Rat
7633439LOC102552297uncharacterized LOC102552297186136366461373917Rat
41107086LOC120098367small nucleolar RNA SNORA33186142409361424221Rat
41187941Tuba1b-ps3tubulin, alpha 1B, pseudogene 3186148541761521355Rat
1587105Ldlrad4low density lipoprotein receptor class A domain containing 4186151925361848403Rat
1562758RGD1562758similar to glyceraldehyde-3-phosphate dehydrogenase186162698861628224Rat
41273283Trmt112-ps1tRNA methyltransferase activator subunit 11-2, pseudogene 1186182926261829727Rat
1359600Fam210afamily with sequence similarity 210, member A186184644761886123Rat
1309242RnmtRNA (guanine-7-) methyltransferase186188623061909775Rat
3058Mc5rmelanocortin 5 receptor186191518861920229Rat
628649Mc2rmelanocortin 2 receptor186200198062015567Rat
7616480LOC102548061uncharacterized LOC102548061186206865262155679Rat
9383011LOC103694235uncharacterized LOC103694235186219624362205929Rat
41285070LOC120098190uncharacterized LOC120098190186247060262487267Rat
11465878LOC108348808uncharacterized LOC108348808186249611662509136Rat
11512205LOC108348809uncharacterized LOC108348809186267937362697171Rat
69271Tcf4transcription factor 4186294173963288126Rat
1561424Ccdc68coiled-coil domain containing 68186354182863584122Rat
620114Rab27bRAB27B, member RAS oncogene family186359755463794124Rat
40955792LOC120098422U4 spliceosomal RNA186379633663796423Rat
7516836LOC102548285uncharacterized LOC102548285186380156463806104Rat
40983148LOC120098183uncharacterized LOC120098183186380773563810721Rat
1564477Ckap2-ps2cytoskeleton-associated protein 2, pseudogene 2186381875863822861Rat
7550710Dynapl1dynactin associated protein-like 1186386513663868338Rat
1596811Dynapdynactin associated protein186388516463909464Rat
40986011LOC120093103uncharacterized LOC120093103186394753763952623Rat
1563837LOC361346similar to chromosome 18 open reading frame 54186406512564090260Rat
1359639Stard6StAR-related lipid transfer domain containing 6186408961864118528Rat
1305212PoliDNA polymerase iota186411677464134373Rat
1595452Mbd2methyl-CpG binding domain protein 2186417400264240795Rat
41071324Polr2k-ps3RNA polymerase II, I and III subunit K, pseudogene 3186424932864249758Rat
41165015Rpl19-ps18ribosomal protein L19, pseudogene 18186425083464251878Rat
1561134RGD1561134similar to goliath-related E3 ubiquitin ligase 4186445159264452974Rat
41309698LOC120098174glyceraldehyde-3-phosphate dehydrogenase-like186461258664613065Rat
2323104Hmga1-ps1high mobility group AT-hook 1, pseudogene 1186468714864687453Rat
2321355Rpl37-ps3ribosomal protein L37, pseudogene 3186480459464869547Rat
2492DccDCC netrin 1 receptor186486898765972783Rat
11402245LOC108348868uncharacterized LOC108348868186520005065209636Rat
40942548LOC120098154uncharacterized LOC120098154186563315965639597Rat
1309023Mex3cmex-3 RNA binding family member C186716760067188595Rat
3033Smad4SMAD family member 4186724374267274438Rat
7725693LOC102551612uncharacterized LOC102551612186729772667301603Rat
7724951LOC102551667uncharacterized LOC102551667186730197267307063Rat
40999476Egfl7-ps1EGF-like-domain, multiple 7, pseudogene 1186731495667318012Rat
1304757Elac1elaC ribonuclease Z 1186732123167341358Rat
1310321Me2malic enzyme 2186735083367400987Rat
9438210LOC10369427160S ribosomal protein L31 pseudogene186743212967432682Rat
1590648LOC680512similar to 60S ribosomal protein L38186743513167435363Rat
1559803Mromaestro186745018667467593Rat
3047Mapk4mitogen-activated protein kinase 4186751280567661271Rat
41031843LOC120098291uncharacterized LOC120098291186766127967664893Rat
7622461LOC102551934uncharacterized LOC102551934186767609367688061Rat
11392733LOC108348860uncharacterized LOC108348860186771436967723766Rat
41075010LOC120098344U7 small nuclear RNA186772038467720448Rat
11435416LOC108348861glyceraldehyde-3-phosphate dehydrogenase pseudogene186779138267793462Rat
1310784Ska1spindle and kinetochore associated complex subunit 1186779472267805037Rat
41227966LOC120098128uncharacterized LOC120098128186780440567806260Rat
1310755Cxxc1CXXC finger protein 1186781318567818556Rat
6485424Rps17-ps3ribosomal protein S17, pseudogene 3186784343767844166Rat
11462331LOC108348812uncharacterized LOC108348812186785761467864070Rat
1305980Mbd1methyl-CpG binding domain protein 1186786987067884501Rat
1306734Cfap53cilia and flagella associated protein 53186788465167955873Rat
11421033LOC108348813putative 60S ribosomal protein L37a186793257967936520Rat
41079746LOC120098236protein NYNRIN-like186796120067964366Rat
41181979LOC120098365small nucleolar RNA SNORA22186798570267985828Rat
1594273Edf1-ps3endothelial differentiation-related factor 1, pseudogene 3186802956668030298Rat
621347Myo5bmyosin Vb186803875968341568Rat
11423228LOC108348815uncharacterized LOC108348815186811253168116297Rat
41202954LOC120098281uncharacterized LOC120098281186811665168125174Rat
41122412LOC120098280uncharacterized LOC120098280186820515668215370Rat
41243114LOC120098279uncharacterized LOC120098279186826156968264363Rat
41254274LOC120098116uncharacterized LOC120098116186834413968344878Rat
41170335LOC120098358small Cajal body-specific RNA 18186834447568344553Rat
41021142LOC120098368small Cajal body-specific RNA 17186834462768344767Rat
620482Acaa2acetyl-CoA acyltransferase 2186834513668373246Rat
7499022LOC102552571uncharacterized LOC102552571186839834768406835Rat
7675035LOC102557471uncharacterized LOC102557471186840506868412280Rat
41113718LOC120098223uncharacterized LOC120098223186849854468500778Rat
1310740Lipglipase G, endothelial type186851492368536105Rat
40926764Trnap-agg92transfer RNA proline (anticodon AGG) 92186853920168539283Rat
1560896Slc25a6solute carrier family 25 member 6186857122968572474Rat
1303019Rpl17ribosomal protein L17186858114768584253Rat
41259955Snord58bsmall nucleolar RNA, C/D box 58B186858186468581929Rat
41237717LOC120098352small nucleolar RNA SNORD58186858225868582322Rat
41345076LOC120098351small nucleolar RNA SNORD58186858269168582755Rat
1562987C18h18orf32similar to human chromosome 18 open reading frame 32186858627868594851Rat
1309111Dymdymeclin186860513168900905Rat
41155797LOC120098440U6 spliceosomal RNA186864373768643836Rat
7507860LOC102556053uncharacterized LOC102556053186898302068985981Rat
69314Smad7SMAD family member 7186898842969016774Rat
1311887Ctifcap binding complex dependent translation initiation factor186905615169327361Rat
41050822LOC120098120uncharacterized LOC120098120186914109969145517Rat
7538513LOC102548286peroxisomal biogenesis factor 19-like186917896169181127Rat
7648927LOC102548225uncharacterized LOC102548225186932739069360937Rat
41116435LOC120098205uncharacterized LOC120098205186941859969427348Rat
1591841Zbtb7czinc finger and BTB domain containing 7C186944161669765744Rat
7600825LOC102556385uncharacterized LOC102556385186946033069498748Rat
3031Smad2SMAD family member 2186984988469918926Rat
7647004LOC102549578uncharacterized LOC102549578186994404669961893Rat
41183907LOC120098188uncharacterized LOC120098188187008676970091898Rat
40937264LOC120098218uncharacterized LOC120098218187016958470179983Rat
41012098LOC120098201uncharacterized LOC120098201187034423170366410Rat
1598071Skor2SKI family transcriptional corepressor 2187040443170446330Rat
1308579Hdhd2haloacid dehalogenase-like hydrolase domain containing 2187047503770526471Rat
41348430LOC120098312uncharacterized LOC120098312187048410570488354Rat
1564708Katnal2katanin catalytic subunit A1 like 2187053175970607886Rat
71056Pias2protein inhibitor of activated STAT, 2187060803470714295Rat
7732886LOC102552068uncharacterized LOC102552068187072176370747209Rat
1302934St8sia5ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5187073663270802537Rat
7659833LOC102551787uncharacterized LOC102551787187081710770836625Rat
1304815Loxhd1lipoxygenase homology PLAT domains 1187081827670969983Rat
1560744Ark2carkadia C-terminal like ring finger ubiquitin ligase 2C187098456671100836Rat
41279532LOC120098327uncharacterized LOC120098327187105897771061228Rat
11432148LOC108348739uncharacterized LOC108348739187110147071110704Rat
7550695LOC102551968uncharacterized LOC102551968187111121471119937Rat
1308601Ark2narkadia N-terminal like PKA signaling regulator 2N187115595671243655Rat
41191641LOC120098380small nucleolar RNA SNORA17187121311971213246Rat
619909Haus1HAUS augmin-like complex, subunit 1187127541771286626Rat
619993Atp5f1aATP synthase F1 subunit alpha187129240671300342Rat
1563090Pstpip2proline-serine-threonine phosphatase-interacting protein 2187131038771396752Rat
1306286Epg5ectopic P-granules 5 autophagy tethering factor187140399071502079Rat
1565948Siglec15sialic acid binding Ig-like lectin 15187150777371521722Rat
3688Slc14a1solute carrier family 14 member 1 (Kidd blood group)187156545371608807Rat
7673145LOC102553274uncharacterized LOC102553274187158870371590861Rat
3689Slc14a2solute carrier family 14 member 2187161246072039462Rat
7644990LOC102553338uncharacterized LOC102553338187186341071893869Rat
41380615LOC120098400U1 spliceosomal RNA187209272472092872Rat
41313779LOC120098366U1 spliceosomal RNA187216679172166942Rat
1306229Setbp1SET binding protein 1187219054272551272Rat
40984187LOC120098108uncharacterized LOC120098108187239469772424213Rat
40943302LOC120098177serine/arginine repetitive matrix protein 5-like187253578672551452Rat
7671108LOC102553546uncharacterized LOC102553546187256070072563152Rat
7508595LOC102553626uncharacterized LOC102553626187257110972588072Rat
7746354LOC102553737uncharacterized LOC102553737187264573272683260Rat
40936624Hmgb1-ps30high-mobility group box 1, pseudogene 30187296508972965701Rat
41332315LOC120098394small nucleolar RNA SNORA17187303346273033556Rat
1597724Rps18-ps4ribosomal protein S18, pseudogene 4187311321773113717Rat
1565291RGD1565291similar to TGF beta-inducible nuclear protein 1 (L-name related LNR42)187314001173140730Rat
1596483Mbnl3-ps1muscleblind-like splicing regulator 3, pseudogene 1187325598673256960Rat
7727741LOC102554148uncharacterized LOC102554148187336590773384828Rat
6503656LOC100909457uncharacterized LOC100909457187336895973370670Rat
9154410LOC103694247uncharacterized LOC103694247187340759873411932Rat
1307398Mrps21lmitochondrial ribosomal protein S21-like187341208073412549Rat
6493141Snw1-ps5SNW domain containing 1, pseudogene 5187347604273477748Rat
1305016Pard6gpar-6 family cell polarity regulator gamma187349811973565048Rat
1308279Adnp2ADNP homeobox 2187357187073597088Rat
11438639LOC108348823uncharacterized LOC108348823187357666873581335Rat
41282139LOC120098235uncharacterized LOC120098235187358137173597096Rat
11363540LOC108348824uncharacterized LOC108348824187362653073630136Rat
11439714LOC10834874060S acidic ribosomal protein P0 pseudogene187363607173636735Rat
1311910Rbfaribosome binding factor A187363926073648942Rat
6492735Txnl4athioredoxin-like 4A187365910773674893Rat
1560212RGD1560212similar to DNA segment, Chr 18, Wayne State University 98, expressed187365913973665531Rat
2301798Hsbp1l1heat shock factor binding protein 1-like 1187368228673690061Rat
1305223Slc66a2solute carrier family 66 member 2187370247273739678Rat
1309521Kcng2potassium voltage-gated channel modifier subfamily G member 2187374222473810420Rat
41400349LOC120098179uncharacterized LOC120098179187377069873773756Rat
9089884LOC103694249uncharacterized LOC103694249187383997173861419Rat
1311755Ctdp1CTD phosphatase subunit 1187385427773916232Rat
2319357Nfatc1nuclear factor of activated T-cells 1187404642174156041Rat
1563006Atp9bATPase phospholipid transporting 9B (putative)187417686374368993Rat
41280604LOC120098164uncharacterized LOC120098164187425377074264525Rat
1310232Sall3spalt-like transcription factor 3187440605874425754Rat
11405714LOC108348827uncharacterized LOC108348827187442548874431245Rat
7512865LOC102548287uncharacterized LOC102548287187469983274719059Rat
41304392LOC120098157uncharacterized LOC120098157187475585674793734Rat
41372303LOC120098186uncharacterized LOC120098186187483225574857223Rat
41191342LOC120098146uncharacterized LOC120098146187495396774989789Rat
11501613LOC108348828uncharacterized LOC108348828187499015374994427Rat
11478883LOC108348829uncharacterized LOC108348829187504967575061260Rat
7718722LOC102548467uncharacterized LOC102548467187504985175055909Rat
41117594LOC120098224uncharacterized LOC120098224187507611775099832Rat
7609985LOC102548626uncharacterized LOC102548626187537026075385371Rat
41304264LOC120098378small nucleolar RNA SNORA17187545097875451108Rat
7541364LOC102548779uncharacterized LOC102548779187546472575480485Rat
41377711LOC120098210uncharacterized LOC120098210187547296175477971Rat
7696337LOC102548851uncharacterized LOC102548851187558276975603131Rat
41309211LOC120098208uncharacterized LOC120098208187560733175614569Rat
7601026LOC102548977uncharacterized LOC102548977187561534375618490Rat
2656Galr1galanin receptor 1187577202175787577Rat
40974163LOC120098219uncharacterized LOC120098219187585058775856756Rat
3054Mbpmyelin basic protein187585587875966404Rat
11459726LOC108348833uncharacterized LOC108348833187593745175959368Rat
1309670Zfp236zinc finger protein 236187597647876072428Rat
40996510LOC120098255uncharacterized LOC120098255187608586176090941Rat
1562171Rpl9-ps18ribosomal protein L9, pseudogene 18187610926976109838Rat
41056581Trnat-agu23transfer RNA threonine (anticodon AGU) 23187615341476153494Rat
9118324LOC103694251uncharacterized LOC103694251187616644376170609Rat
7523197LOC102552357uncharacterized LOC102552357187617120576198741Rat
11489686LOC108348835uncharacterized LOC108348835187624305476254356Rat
7554635LOC102552572uncharacterized LOC102552572187627893676297462Rat
1306817Zfp516zinc finger protein 516187628645376386526Rat
41132170LOC120098409U1 spliceosomal RNA187670122976701384Rat
40981657LOC120098250uncharacterized LOC120098250187672163776731166Rat
7738973LOC102552707uncharacterized LOC102552707187682367776880809Rat
41050242LOC120098191uncharacterized LOC120098191187686848276900985Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10667D18Mit17117186076313260763249Ratregion
33814D18Mit9180187720969477209844Ratregion
34043D18Mit16150186169831761698465Ratregion
34182D18Mgh3171186584495065845095Ratregion
34256D4Mgh18124186205711662057171Ratregion
34270D18Mgh6136186702536067025492Ratregion
34290D18Mgh4126187647781476477940Ratregion
34421D15Mgh10109187114739571147526Ratregion
37514D18Rat43212186357104063571267Ratregion
37586D18Rat74172187518195575182127Ratregion
35282D18Rat5162187399714073997283Ratregion
36816D18Rat12222186938409269384326Ratregion
36954D18Rat6170187375435573754523Ratregion
37840D18Rat58202187047070770470905Ratregion
36638D18Rat14173186393288563933058Ratregion
36642D18Rat4176187564109175641261Ratregion
36763D18Rat33175187475698574757160Ratregion
34781D18Rat7227186987686669877088Ratregion
34975D18Rat13149186363672163636873Ratregion
34993D18Rat11133186841398368414117Ratregion
35639D18Rat15171186623360666233777Ratregion
35677D18Rat10159186805865768058814Ratregion
35977D18Rat8163186914059269140759Ratregion
39782D18Rat115153187221554272215695Ratregion
39904D18Rat78201187654164076541851Ratregion
40670D18Rat87240186314087063141096Ratregion
40682D18Rat85205186514612965146325Ratregion
40710D18Rat89219186072228660722497Ratregion
38556D18Rat54249186543789165438136Ratregion
40244D18Rat83149186863156268631709Ratregion
39098D18Rat45131187405561974055742Ratregion
39258D18Rat49148187253752472537690Ratregion
42050D18Arb5268186076305360763320Ratregion
42054D18Arb7185186319560063195769Ratregion
42883D9Rat159248186671291066713150Ratregion
41180D18Rat79139187569796975698109Ratregion
41284D18Rat86175186548935565489518Ratregion
41356D18Rat82154187026369870263868Ratregion
41404D18Rat88125186336571863365833Ratregion
40908D18Rat90234186218573862185972Ratregion
41022D18Rat81224187572232075722544Ratregion
41660D18Rat124201186490744864907655Ratregion
41736D18Rat136200187276867872768878Ratregion
41754D18Rat123149186798379667983944Ratregion
41878D18Rat121245187101993071020158Ratregion
43123D18Rat126200186402116564021365Ratregion
43125D18Rat120167187071923270719403Ratregion
45519D18Got70186187670964076709826Ratregion
45522D18Got67224187693902976939253Ratregion
45528D18Got69239187720968777209925Ratregion
45530D18Got71125187301506573015192Ratregion
45531D18Got76145187075202970752174Ratregion
45532D18Got65262186917233569172598Ratregion
45534D18Got63170186392072763920897Ratregion
45536D18Got62213186090670160906914Ratregion
45537D18Wox6166186113406361134215Ratregion
67820D18Uwm1171186978134269781517Ratregion
629590D18Hmgc1142187652910676529238Ratregion
60017D12Got44175186855858568558759Ratregion
62466D18Uia6200187610418476104388Ratregion
66578D18Mco5350186953010669530291Ratregion
66578D18Mco5350186953010669530370Ratregion
66581D18Mco7200186836193768362093Ratregion
1578815D18Chm68184187567983975680023Ratregion
1578824D18Chm67164187567591775676081Ratregion
1578833D18Chm71181187574617975746360Ratregion
1578848D18Chm64218187097856370978781Ratregion
1631045D18Got114152186635553366355687Ratregion
1578876D18Chm83199187604731076047509Ratregion
1578894D18Chm69159187568332375683482Ratregion
1578895D18Chm63185187001996670020153Ratregion
1578905D18Chm60235186719586267196099Ratregion
1578925D18Chm82158187601786576018023Ratregion
1578928D18Chm58188186518591265186096Ratregion
1578943D18Chm70167187571105675711223Ratregion
1578958D18Chm78206187586933675869542Ratregion
1578989D18Chm77203187586678675866989Ratregion
1579002D18Chm72182187575642175756603Ratregion
1579029D18Chm61133186841398468414117Ratregion
1579030D18Chm66195187565368975653886Ratregion
1579038D18Chm80186187592730075927488Ratregion
1579045D18Chm79211187592256775922778Ratregion
1579063D18Chm65249187564717475647423Ratregion
1579082D18Chm76177187583308875833265Ratregion
1579085D18Chm74190187578159375781783Ratregion
1579087D18Chm81209187599611375996322Ratregion
1579106D18Chm73192187577839675778588Ratregion
1579115D18Chm62163186924569469245857Ratregion
1579178D18Chm75177187582995675830135Ratregion
1579184D18Chm59153186597033165970689Ratregion
1579184D18Chm59153186597053465970689Ratregion
1629471D18Mco91038186229986662300904Ratregion
1640801D18Got128332186402724764027578Ratregion
1641762D18Got104137186851523668515373Ratregion
1633007D18Got119165187613975876139923Ratregion
1633167D18Got123128186548931765489445Ratregion
1639791D18Got129264186595171465951978Ratregion
1636968D18M18Mit1158187712681077126968Ratregion
1637144D18Got127170186718287767183047Ratregion
1637343D18Wox26113187127353671273649Ratregion
5035965PMC324399P1413186991118169911594Ratregion
5036021PMC86557P1279186726053767260816Ratregion
5038748RH127310199186746706467467263Ratregion
5038782RH127329220187150107871501298Ratregion
5036195D18Wsu70e252186724380467244056Ratregion
5036581AU048500285187360432673604611Ratregion
5036727AU049012140187524037175240511Ratregion
5034005RH140999219187070357570703794Ratregion
5031430AU048350299187446585874466157Ratregion
5034163RH141608183186976536569765549Ratregion
5026314RH131736191186184658561846776Ratregion
5031694AU047461214186610885066109064Ratregion
5029133RH143646131186303825563038386Ratregion
5034678BI275599172186088721860887390Ratregion
5026816RH133642183186117925261179435Ratregion
5032195RH126471242187373935973739601Ratregion
5032237X98014122187079758270797704Ratregion
5026924RH134059194187122066671220860Ratregion
5029651BF386607150186169410661694256Ratregion
5035470BE108561160186319636663196526Ratregion
5027155RH65263127186095219660952323Ratregion
5029837BI27883398186358381063583908Ratregion
5032735RH135108215187070175170701966Ratregion
5035206BM390619166187363685273637018Ratregion
5035246AI599676155187365949873659653Ratregion
5024950Mc2r116186200503362005149Ratregion
5025196RH127384220186991194969912169Ratregion
5030525BF403782102186831389268313994Ratregion
5028019MDB065998187219410572194203Ratregion
5033359RH138542124186184227861842402Ratregion
5025526RH128663183186732387367324056Ratregion
5033633RH139541210187070248670702696Ratregion
5053499RH142684142187118670171186842Ratregion
5051593AW550622100186104237661042476Ratregion
5053779RH142846167187227005372270220Ratregion
5053851RH142887203186306546063065663Ratregion
5054053RH143003257186965238869652840Ratregion
5051919RH94734125187577309475773219Ratregion
5057434AA858489194186991133969911533Ratregion
5054521RH143272216186407339964073615Ratregion
5059540BE097236162187372268673722848Ratregion
5057616BE095707165186728471167284876Ratregion
5054819RH143443102186724471067244812Ratregion
5054835RH143452123186872501468725137Ratregion
5057918BF386306165187080005070800215Ratregion
5057940BF392934219187486216374862382Ratregion
5055157RH143638121186118071961181005Ratregion
5058788BE102437154187593972375939877Ratregion
5059574BE097318161187225057972250740Ratregion
5059596BE097391179186153318061533359Ratregion
5056647RH144499288186766156367661851Ratregion
5056845RH144614191186073798360738174Ratregion
5058152BI277637192186136941361369605Ratregion
5052673RH142200181186191647961916660Ratregion
5058914BF387226171186765960367659774Ratregion
5059714BF394247162186076925160769413Ratregion
5058224BF386846150187394727773947427Ratregion
5058276BF386932172186102683761027009Ratregion
5058312BI277908190186411400664114196Ratregion
5053161RH142489175187068727970687454Ratregion
5059098BF387492162186755539767555559Ratregion
5059160BE102916155187158168171581836Ratregion
5059188BF387606153186102763561027788Ratregion
5050190RH133913190187505515575055345Ratregion
5050412RH134041180186095282860953009Ratregion
5050800RH134265186186991807869918264Ratregion
5051244RH134522189186890066868900857Ratregion
5054459RH143236147187131445971314606Ratregion
5053333RH142588127186735680767356934Ratregion
5054629RH143334237186135492761356264Ratregion
5054755RH143406100187068784670687946Ratregion
5041806RH129069180186104309161043271Ratregion
5040834RH128510195187366515873665353Ratregion
5041114RH128670218186184803261848250Ratregion
5045088RH130977189187070499270705181Ratregion
5045104RH130986180186735585167356031Ratregion
5043906RH130297199186751292167513120Ratregion
5046202RH131617216187408835374088569Ratregion
5044728RH130770189187048584570486034Ratregion
5046322RH131686213187052554170525754Ratregion
5044300RH130523209187593926275939471Ratregion
5046564RH131826217186991854269918759Ratregion
5047432RH132324189186104203161042220Ratregion
5048890RH133165197186905756669057763Ratregion
5049390RH133453181187100314271003323Ratregion
5047018RH132087214186101814061018354Ratregion
5047122RH132146215186486922564869440Ratregion
5048464RH132919187186359496763595154Ratregion
5039980RH128019219187357270973572928Ratregion
5042314RH129363189186837305168373240Ratregion
5042534RH129492215186424063764240852Ratregion
5042546RH129499208186074167060741878Ratregion
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5048604RH132999217187597666575976882Ratregion
5048664RH133034206187374241873742624Ratregion
5040176RH128133182186086500360865185Ratregion
5042614RH129541191186190663061906821Ratregion
5042100RH129239216186074167060741886Ratregion
5040458RH128295185186781824067818425Ratregion
5043124RH129846165186200201162002176Ratregion
5043172RH129873215186724383767244052Ratregion
5039856RH127946203187069842170698624Ratregion
5042370RH129395159186837308768373246Ratregion
5042646RH129559215186104241061042625Ratregion
5040520RH128330201187417753074177731Ratregion
5041318RH128788214187596614375966357Ratregion
5075114RH138406188186732133667321524Ratregion
5073832RH137664161187156561371565774Ratregion
5075318RH138525153187638448676384639Ratregion
5076368RH139135122187246432572464447Ratregion
5072664RH136981206186134376361343969Ratregion
5075292RH138510123186103453861034661Ratregion
5075304RH138517156187414574974145905Ratregion
5080586RH141665184186735111267351296Ratregion
5080684RH141722193186076360260763795Ratregion
5080706RH141734192187071071970710911Ratregion
5076046RH138947148186328705963287207Ratregion
5076120RH138991134187252952272529656Ratregion
5075164RH138435123186118619161186314Ratregion
5076730RH139345184186735274167352925Ratregion
5076808RH139390124186411578064115904Ratregion
5077770RH139949214187079732470797538Ratregion
5078348RH140289206186359792863598134Ratregion
5072968RH137158194187638626176386455Ratregion
5071138RH134908156186723938867239544Ratregion
5080542RH141640155187593717675937331Ratregion
5078868RH140598199186185141161851610Ratregion
5070670RH134637193187115619671156389Ratregion
5071504RH135120186186788267667882863Ratregion
5071674RH135219182187404715474047336Ratregion
5073878RH137691157186745775467457911Ratregion
5070938RH134793205187357196873572173Ratregion
5071154RH134918189187139648171396670Ratregion
5071372RH135044194187356473473564928Ratregion
5071458RH135094199187098984170990040Ratregion
5072400RH136827152186779493767795089Ratregion
5071802RH135293205186185385761854062Ratregion
5061700BF402482157187595194775952104Ratregion
5063336BE107548194186120847761208671Ratregion
5065076BF405689141187596304075963181Ratregion
5065106BF405832177186755551267555689Ratregion
5066798AU048144236187212215572122386Ratregion
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5066864AU048105261187212215972122420Ratregion
5067914AU047460186186610884466109030Ratregion
5068538AU047085174187515663075156804Ratregion
5068616AU047037210187063471870634762Ratregion
5070235RH94550172186191785461918026Ratregion
5069104AU046722136186206675362066889Ratregion
5070406AI427432148187098476370984911Ratregion
5060196BF400698145186121510561215250Ratregion
5061934BE112163175187381107573811250Ratregion
5063522BE107748179186497075164970930Ratregion
5060628BI286279214186858227768582491Ratregion
5062224BE106373150186537946065379610Ratregion
5060730BF389035125186787133267871457Ratregion
5062576BF403438165186122708561227250Ratregion
5062778AW534410169186319711063197279Ratregion
5065328BI297035163186184982161849984Ratregion
5065360AA963895152186851330568513457Ratregion
5062448BI288878199186185280561853004Ratregion
5063982BE120364151186129662761296778Ratregion
5063990BE120385219186306729163067511Ratregion
5065698BE109662152186119251561192667Ratregion
5060920BF401382225186915404169154266Ratregion
5066030BE116587150186324976163249911Ratregion
5064536BF399308248186175514961755397Ratregion
5064834BF405190100187073213370732233Ratregion
5061516BE111942179186716238567162564Ratregion
5061662BE105775152186594549165945643Ratregion
5086877BM388257166186931537369315539Ratregion
5086100BF387725150186766467367664823Ratregion
5087078BE106956159187594450375944662Ratregion
5087205BM387980215187504976675049981Ratregion
5087340AI717058139186727965067279789Ratregion
5082983BF390562165187293002072930185Ratregion
5089843AU049396219186896438768964606Ratregion
5083193BF390958192186301840463018596Ratregion
5083339BF417987147186067258460672731Ratregion
5083439BF391242104186747518067475284Ratregion
5088831AU048796167186570772265707889Ratregion
5089609AU049257298187221549872215796Ratregion
5083976AA892769186187443504074435226Ratregion
5081669BE117956180187219428872194468Ratregion
5090165AU049589156186769746667697623Ratregion
5090235AU049630148186419293564193083Ratregion
5087574PMC324399P2500186724454367245043Ratregion
5084898AI178947204187355695473557158Ratregion
5085395BM390268190187003538770035577Ratregion
5090673AU049893216186290710462907320Ratregion
5090717AU049921182186142044361420625Ratregion
5085294BQ195828152187512483575124987Ratregion
5085314AW534258163186487143364871596Ratregion
5081320RH142092193186086721960867412Ratregion
5082699BF416672250187077160170771851Ratregion
5085830BF387441183186751504367515226Ratregion
5085978BQ204385188186951808269518270Ratregion
5085982AW529377168187440768174407849Ratregion
5080884RH141838208186424281164243019Ratregion
5082755AW520939155186592011365920268Ratregion
5082967BF390509190187460021574600405Ratregion
5086642BE115218219187371990173720120Ratregion
5081555BE117353155186406578664065941Ratregion
5083623BG38120094187111202771112121Ratregion
5086707BE107285155186418780864187962Ratregion
5081837BE118490153186541887165419024Ratregion
5503296UniSTS:237838320186328689963287219Ratregion
5503692Smad71509186899031968991828Ratregion
5504526PMC26746P1117186918004269180159Ratregion
5504406PMC193708P2104186899159068991694Ratregion
5504897ha3141208187105226371052471Ratregion
5505416Pias21002187070314370704145Ratregion
5506549MADH2_1658608186991115469911762Ratregion
5506712AF010230169186725190467252073Ratregion
5506863G46819230187713730277137532Ratregion
5500167D18Mit216611187675908876759699Ratregion
5500346GDB:201899155186529627165296426Ratregion
5500891STS-Z407940186327565363275991Ratregion
5503298UniSTS:237853133187357293273573065Ratregion
5503300UniSTS:237833200186074091960741119Ratregion
5501217PMC156124P3298186095190660952204Ratregion
5501494D12S881343187394033473940677Ratregion
5501604RH36897670186927149769272167Ratregion
5505538D9S286720186695011566950835Ratregion
5506885G47243250186881713968817391Ratregion
Position Markers

Flank 1: (Gnal)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21860,622,311 - 60,762,599 (+)NCBI
mRatBN7.2 Ensembl1860,622,311 - 60,762,599 (+)Ensembl
UTH_Rnor_SHR_Utx1862,697,583 - 62,835,273 (+)NCBI
UTH_Rnor_SHRSP_BbbUtx_1.01863,396,310 - 63,534,014 (+)NCBI
UTH_Rnor_WKY_Bbb_1.01861,243,031 - 61,383,188 (+)NCBI
Rnor_6.01862,805,406 - 62,946,133 (+)NCBI
Rnor_6.0 Ensembl1862,805,410 - 62,944,630 (+)Ensembl
Rnor_5.01861,991,738 - 62,131,420 (+)NCBI
RGSC_v3.41863,595,606 - 63,735,803 (+)NCBI
RGSC_v3.11863,668,806 - 63,809,004 (+)NCBI
Celera1858,730,137 - 58,870,361 (+)NCBI
Cytogenetic Map18q12.1NCBI
Flank 2: (D18Mit9)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21877,209,694 - 77,209,844 (+)MAPPER
Rnor_6.01880,696,226 - 80,696,375NCBI
Rnor_5.01879,748,238 - 79,748,387UniSTS
RGSC_v3.41880,370,367 - 80,370,517RGD
RGSC_v3.41880,370,368 - 80,370,517UniSTS
RGSC_v3.11880,443,810 - 80,444,102RGD
Celera1875,835,913 - 75,836,062UniSTS
RH 3.4 Map18814.4UniSTS
RH 3.4 Map18814.4RGD
RH 2.0 Map1853.0RGD
SHRSP x BN Map1849.0499RGD
FHH x ACI Map1860.7699RGD
Cytogenetic Map7q36UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2293708Bss46Bone structure and strength QTL 468.80.0001lumbar vertebra morphology trait (VT:0010494)lumbar vertebra cortical cross-sectional area (CMO:0001690)181179151863636873Rat
1578661Bss20Bone structure and strength QTL 203.7femur morphology trait (VT:0000559)femoral neck cross-sectional area (CMO:0001697)181179151883218561Rat
1578667Bss21Bone structure and strength QTL 213.5femur morphology trait (VT:0000559)femoral neck cortical cross-sectional area (CMO:0001702)181179151883218561Rat
1358193Emca2Estrogen-induced mammary cancer QTL 21.6mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)181800759963571040Rat
1600373Mamtr6Mammary tumor resistance QTL 6mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)181927890183218561Rat
1331741Bp232Blood pressure QTL 2323.59112arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)182137289383213037Rat
1331733Bp233Blood pressure QTL 2333.97196arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182479697779788953Rat
2325839Bp348Blood pressure QTL 3480.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182557098570570985Rat
2293704Bss35Bone structure and strength QTL 354.590.0002femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)182896485373964853Rat
2300157Bmd66Bone mineral density QTL 6613.10.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)182896485373964853Rat
2300177Bmd65Bone mineral density QTL 6519.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)182896485373964853Rat
9589816Gluco68Glucose level QTL 687.250.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)182979296574792965Rat
8694378Bw157Body weight QTL 1573.590.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)182979296574792965Rat
9590318Scort22Serum corticosterone level QTL 227.640.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)182979296574792965Rat
1331754Bp230Blood pressure QTL 2304.61609arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)182979296574792965Rat
738005Anxrr11Anxiety related response QTL 113.4exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)183003981375039813Rat
1331727Bp237Blood pressure QTL 2373.053arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)183135940861698465Rat
61429Cia17Collagen induced arthritis QTL 174.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)183135940870263868Rat
2303120Mamtr8Mammary tumor resistance QTL 80.001mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)183135940883218561Rat
631274Sprol1Serum protein level QTL 15.3blood total protein amount (VT:0005567)serum total protein level (CMO:0000661)183139332077209694Rat
631518Bw11Body weight QTL 112.8body mass (VT:0001259)body weight (CMO:0000012)183587072380870723Rat
61367Iddm4Insulin dependent diabetes mellitus QTL 42.330.0074blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)183819245583192455Rat
1598826Anxrr20Anxiety related response QTL 203.04body movement coordination trait (VT:0005424)number of rearing movements in an experimental apparatus (CMO:0001752)184143297183828827Rat
6893683Bw110Body weight QTL 1102.70.002body mass (VT:0001259)body weight (CMO:0000012)184334502283828827Rat
8694366Abfw8Abdominal fat weight QTL 86.380.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)184664067583828827Rat
8694432Bw165Body weight QTL 1653.810.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)184664067583828827Rat
9589041Epfw12Epididymal fat weight QTL 1217.080.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)184664067583828827Rat
2303571Bw92Body weight QTL 923body mass (VT:0001259)body weight (CMO:0000012)184852004483828827Rat
2303584Gluco55Glucose level QTL 552blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)184852004483828827Rat
7411719Strs5Sensitivity to stroke QTL 59.4cerebrum integrity trait (VT:0010549)percentage of study population developing cerebrovascular lesions during a period of time (CMO:0000932)184999995865845095Rat
2293658Bmd23Bone mineral density QTL 237.30.0001femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)185146473363636873Rat
738008Hcar14Hepatocarcinoma resistance QTL 144.3liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion number (CMO:0001462)185146473383218561Rat
1331752Bw27Body weight QTL 272.963body mass (VT:0001259)body weight (CMO:0000012)185229287565845095Rat
1359020Ppulsi2Prepulse inhibition QTL 22.71prepulse inhibition trait (VT:0003088)acoustic startle response measurement (CMO:0001519)185229287573997283Rat
1600375Mcs22Mammary carcinoma susceptibility QTL 223.3mammary gland integrity trait (VT:0010552)mammary tumor growth rate (CMO:0000344)185253976363933058Rat
631509Sald2Serum aldosterone level QTL 22.9blood aldosterone amount (VT:0005346)serum aldosterone level (CMO:0000487)185253976369140759Rat
12880368Bw187Body weight QTL 1870.045body mass (VT:0001259)body weight (CMO:0000012)185253976376104388Rat
12904067Cm122Cardiac mass QTL 1220.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)185253976376104388Rat
12904069Cm123Cardiac mass QTL 1230.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)185253976376104388Rat
12904070Cm124Cardiac mass QTL 1240.01heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)185253976376104388Rat
12904071Am18Aortic mass QTL 180.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)185253976376104388Rat
12904073Kidm71Kidney mass QTL 710.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)185253976376104388Rat
2301417Bp319Blood pressure QTL 3190.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)185253976376104388Rat
1300125Rf26Renal function QTL 263.2urine potassium amount (VT:0010539)urine potassium excretion rate (CMO:0000761)185253986365844950Rat
1298072Cia26Collagen induced arthritis QTL 263.6joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)185470976983828827Rat
631834Sach3Saccharin preference QTL 33.90.01consumption behavior trait (VT:0002069)calculated saccharin drink intake volume (CMO:0001600)185880568763636873Rat
724542Kidm2Kidney mass QTL 22.6kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)185917211583828827Rat
2312600Bp341Blood pressure QTL 3410.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)185933040970263868Rat
2301969Bp324Blood pressure QTL 3244.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)185971241776477814Rat
70185BpQTLcluster15Blood pressure QTL cluster 154.61arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)185971241776477814Rat
70185BpQTLcluster15Blood pressure QTL cluster 154.61arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)185971241776477814Rat
70185BpQTLcluster15Blood pressure QTL cluster 154.61arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)185971241776477814Rat
70185BpQTLcluster15Blood pressure QTL cluster 154.61arterial blood pressure trait (VT:2000000)absolute change in systolic blood pressure (CMO:0000607)185971241776477814Rat
1331770Bp234Blood pressure QTL 2343.807arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)185979647871893566Rat
6903353Bp353Blood pressure QTL 3532.8arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)185979647883828827Rat
6903356Bp354Blood pressure QTL 3544.6arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)185979647883828827Rat
61384Bp48Blood pressure QTL 4819.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)186062231177209844Rat
631675Iddm15Insulin dependent diabetes mellitus QTL 15urine glucose amount (VT:0001758)percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)186062231177209844Rat
634333Pia19Pristane induced arthritis QTL 193.4joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)187399714079532029Rat
70172Eae15Experimental allergic encephalomyelitis QTL 150.001nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)187647781477209844Rat


Additional Information

Database Acc Id Source(s)
NCBI Gene Bp48

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general linked to the albumin and phosphate excretion 61055