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References
References - curated
Region Position Markers
QTLs in Region (GRCh38)
RGD ID | Symbol | Name | LOD | P Value | Trait | Sub Trait | Chr | Start | Stop | Species | 597497406 | GWAS1593480_H | smoking initiation QTL GWAS1593480 (human) | 3e-18 | smoking initiation | 9 | 133613233 | 133613234 | Human | 597499625 | GWAS1595699_H | body mass index QTL GWAS1595699 (human) | 2e-12 | body mass index | body mass index (BMI) (CMO:0000105) | 9 | 133613233 | 133613234 | Human | 597377565 | GWAS1473639_H | smoking behavior QTL GWAS1473639 (human) | 4e-08 | smoking behavior | 9 | 133613233 | 133613234 | Human | 597465940 | GWAS1562014_H | cigarettes per day measurement QTL GWAS1562014 (human) | 6e-11 | cigarettes per day measurement | 9 | 133613233 | 133613234 | Human | 597465942 | GWAS1562016_H | tobacco smoke exposure measurement QTL GWAS1562016 (human) | 2e-21 | tobacco smoke exposure measurement | 9 | 133613233 | 133613234 | Human | 597460339 | GWAS1556413_H | smoking cessation QTL GWAS1556413 (human) | 4e-12 | smoking cessation | 9 | 133613233 | 133613234 | Human | |
Additional Information
GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog | ![]() |
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The highlighted row represents the current QTL |
QTL | GWAS Catalog Study | Disease Trait | Study Size | Risk Allele | Risk Allele Frequency | P Value | P Value MLOG | Peak Marker | Reported Odds Ratio or Beta-coefficient | Ontology Accession | PubMed |
GWAS1473639_H | GCST000666 | Smoking behavior | Up to 74,035 European ancestry individuals | G | 0.84 | 4E-8 | 7.398 | rs3025343 | 1.12 | smoking behavior (EFO:0004318) |
PMID:20418890 |
GWAS1556413_H | GCST007604 | Smoking cessation | 121,543 European and South Asian ancestry individuals | A | NR | 4E-12 | 11.398 | rs3025343 | 0.039 | smoking cessation (EFO:0004319) |
PMID:30617275 |
GWAS1562014_H | GCST008809 | Smoking behaviour (cigarettes smoked per day) | up to 153,918 European ancestry individuals | A | 0.117 | 6E-11 | 10.222 | rs3025343 | 0.0368 | cigarettes per day measurement (EFO:0006525) |
PMID:30679032 |
GWAS1562016_H | GCST008803 | Smoking behaviour (cigarette pack-years) | up to 150,993 European ancestry individuals | A | 0.114 | 2E-21 | 20.699 | rs3025343 | 0.0501 | tobacco smoke exposure measurement (EFO:0009115) |
PMID:30679032 |
GWAS1593480_H | GCST90243985 | Smoking initiation | 3,382,012 European ancestry, East Asian ancestry, Hispanic or Latin American, African ancestry individuals | A | 0.102 | 3E-18 | 17.523 | rs3025343 | 0.0117 | smoking initiation (EFO:0005670) |
PMID:36477530 |
GWAS1595699_H | GCST90255621 | Body mass index | 1,122,049 European ancestry individuals | G | NR | 2E-12 | 11.699 | rs3025343 | 0.0148 | body mass index (EFO:0004340) |
PMID:36581621 |
RGD Curation Notes
Note Type | Note | Reference |
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