GWAS1476453_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL: GWAS1476453_H (kynurenic acid measurement QTL GWAS1476453 (human)) Homo sapiens

Symbol: GWAS1476453_H
Name: kynurenic acid measurement QTL GWAS1476453 (human)
RGD ID: 597380379
Trait: kynurenic acid measurement
LOD Score: Not Available
P Value: 1.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh383196,678,265 - 196,678,266RGD_MAPPER_PIPELINEGRCh38
GRCh373196,405,136 - 196,405,137RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS1476453_HHumankynurenic acid measurement  IAGPrs1684460405850206 GWAS_CATALOGPMID:23823483
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Position Markers

Peak: (rs1684460)
Human AssemblyChrPosition (strand)Source
GRCh383196,678,265 - 196,678,266RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
597380379GWAS1476453_Hkynurenic acid measurement QTL GWAS1476453 (human)0.000001kynurenic acid measurement3196678265196678266Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS1476453_H GCST009391 Metabolite levels 2,076 European ancestry individuals ? NR 0.000001 6 rs1684460 0.22202429 kynurenic acid measurement (EFO:0010506)
PMID:23823483
Database Acc Id Source(s)
GWAS Catalog GCST009391 GWAS Catalog

RGD Curation Notes
Note Type Note Reference