GWAS1398022_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS1398022_H (adrenomedullin measurement QTL GWAS1398022 (human)) Homo sapiens

Symbol: GWAS1398022_H
Name: adrenomedullin measurement QTL GWAS1398022 (human)
RGD ID: 597301948
Trait: adrenomedullin measurement
LOD Score: Not Available
P Value: 2.0E-26
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381915,476,534 - 15,476,535RGD_MAPPER_PIPELINEGRCh38
GRCh371915,587,345 - 15,587,346RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)



References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1346354PGLYRP2peptidoglycan recognition protein 2191546864515479501Human

Position Markers

Peak: (rs3813135)
Human AssemblyChrPosition (strand)Source
GRCh381915,476,534 - 15,476,535RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1298499UAE1_HUrinary albumin excretion QTL 1 (human)2.730.0009Urinary albumin excretionurine albumin:creatinine ratio (ACR)19116075902Human
1300034BP50_HBlood pressure QTL 50 (human)2.10.00094Blood pressuresystolic191108946337089463Human
1643451SLIPL6_HSerum lipid level QTL 6 (human)2.190.0008Lipid level19116075902Human
1581534BP76_HBlood pressure QTL 76 (human)20.001Blood pressurepulse pressure19116075902Human
597301948GWAS1398022_Hadrenomedullin measurement QTL GWAS1398022 (human)2e-26adrenomedullin measurement191547653415476535Human
1581535BP65_HBlood pressure QTL 65 (human)3.10.001Blood pressurepulse pressure19116075902Human
406891255GWAS540231_Hadrenomedullin measurement QTL GWAS540231 (human)2e-26adrenomedullin measurement191547653415476535Human
2314591INSUL4_HInsulin level QTL 4 (human)3.80.000038Insulin levelfasting19116075902Human
628572490GWAS2480719_Hadrenomedullin measurement QTL GWAS2480719 (human)2e-26kidney adrenomedullin amount (VT:0010754)kidney adrenomedullin level (CMO:0002916)191547653415476535Human
1298476BP3_HBlood pressure QTL 3 (human)2.4Blood pressuresystolic19116075902Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS2480719_H GCST90240213 Adrenomedullin levels (ADM.14115.34.3) 3,301 European ancestry individuals C 0.379 2E-26 25.699 rs3813135 0.27 adrenomedullin measurement (EFO:0010909)
 PMID:29875488
Database Acc Id Source(s)
GWAS Catalog GCST90240213 GWAS Catalog

RGD Curation Notes
Note Type Note Reference