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References
References - curated
Region Genes in Region
RGD ID | Symbol | Name | Chr | Start | Stop | Species | 10356 | CHRNA4 | cholinergic receptor nicotinic alpha 4 subunit | 20 | 63343223 | 63361349 | Human | 16551535 | AL121827.1 | novel transcript, antisense to CHRNA4 | 20 | 63359988 | 63371177 | Human | |
Position Markers
Peak: (rs45497800) |
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QTLs in Region (GRCh38)
The following QTLs overlap with this region. | ![]() | Full Report | ![]() | CSV | ![]() | TAB | ![]() | Printer | ![]() | Gviewer |
Additional Information
GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog | ![]() |
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The highlighted row represents the current QTL |
QTL | GWAS Catalog Study | Disease Trait | Study Size | Risk Allele | Risk Allele Frequency | P Value | P Value MLOG | Peak Marker | Reported Odds Ratio or Beta-coefficient | Ontology Accession | PubMed |
GWAS1126851_H | GCST008803 | Smoking behaviour (cigarette pack-years) | up to 150,993 European ancestry individuals | T | 0.0867 | 2E-16 | 15.699 | rs45497800 | 0.0541 | tobacco smoke exposure measurement (EFO:0009115) |
PMID:30679032 |
GWAS1283202_H | GCST90243988 | Smoking cessation | 1,400,535 European ancestry, East Asian ancestry, Hispanic or Latin American, African ancestry individuals | T | 0.0811 | 7E-41 | 40.155 | rs45497800 | 0.0309 | smoking cessation (EFO:0004319) |
PMID:36477530 |
GWAS1429361_H | GCST90243980 | Smoking cessation | 1,147,272 European ancestry individuals | T | 0.0843 | 1E-38 | 38 | rs45497800 | 0.031 | smoking cessation (EFO:0004319) |
PMID:36477530 |
RGD Curation Notes
Note Type | Note | Reference |
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