GWAS1126803_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL: GWAS1126803_H (tobacco smoke exposure measurement QTL GWAS1126803 (human)) Homo sapiens

Symbol: GWAS1126803_H
Name: tobacco smoke exposure measurement QTL GWAS1126803 (human)
RGD ID: 597030729
Trait: tobacco smoke exposure measurement
LOD Score: Not Available
P Value: 8.0E-10
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3813111,527,606 - 111,527,607RGD_MAPPER_PIPELINEGRCh38
GRCh3713112,179,953 - 112,179,954RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS1126803_HHumantobacco smoke exposure measurement  IAGPrs2026174405850206 GWAS_CATALOGPMID:30679032
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Position Markers

Peak: (rs2026174)
Human AssemblyChrPosition (strand)Source
GRCh3813111,527,606 - 111,527,607RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
597030729GWAS1126803_Htobacco smoke exposure measurement QTL GWAS1126803 (human)8e-10tobacco smoke exposure measurement13111527606111527607Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS1126803_H GCST008803 Smoking behaviour (cigarette pack-years) up to 150,993 European ancestry individuals T 0.504 8E-10 9.097 rs2026174 0.0227 tobacco smoke exposure measurement (EFO:0009115)
PMID:30679032
Database Acc Id Source(s)
GWAS Catalog GCST008803 GWAS Catalog

RGD Curation Notes
Note Type Note Reference