Bss103 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Bss103 (Bone structure and strength QTL 103) Rattus norvegicus

Symbol: Bss103
Name: Bone structure and strength QTL 103
RGD ID: 5685002
Trait: tibia strength trait   (VT:1000284)    
Measurement Type: tibia total energy absorbed before break   (CMO:0001736)    
LOD Score: 2.8
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr81516,911,521 - 32,439,851RGD_MAPPER_PIPELINE
mRatBN7.21514,481,165 - 28,469,888RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01515,828,242 - 33,657,761RGD_MAPPER_PIPELINERnor_6.0
Rnor_5.01519,829,554 - 37,544,317RGD_MAPPER_PIPELINERnor_5.0
RGSC_v3.41516,365,832 - 33,094,595RGD_MAPPER_PIPELINERGSC_v3.4
Cross Type: Not Available
Strains Crossed: GK/KyoSwe F344/DuCrlSwe 



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
Bss103Rattibia total energy absorbed before break  IDA 5684953 RGD 

Experimental Condition
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
Bss103Ratcontrol condition  IDA 5684953 RGD 

Measurement Method
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
Bss103Ratbone three-point bending test  IDA 5684953 RGD 

Rat Strain
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
Bss103RatF344/DuCrlSwe  IEA 5684953 RGD 
Bss103RatGK/KyoSwe  IEA 5684953 RGD 

Vertebrate Trait
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
Bss103Rattibia strength trait  IDA 5684953 RGD 

Disease Annotations     Click to see Annotation Detail View
osteoporosis  (IAGP)

Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
F344/DuCrlSwe  (IEA)
GK/KyoSwe  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Identification of candidate gene regions in the rat by co-localization of QTLs for bone density, size, structure and strength. Lagerholm S, etal., PLoS One. 2011;6(7):e22462. Epub 2011 Jul 27.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
620448Fhitfragile histidine triad diadenosine triphosphatase151393502915442620Rat
40976044Rpl12-ps11ribosomal protein L12, pseudogene 11151474028314744276Rat
41157198LOC120097099uncharacterized LOC120097099151479347414820529Rat
41248163LOC120097098uncharacterized LOC120097098151516073515164587Rat
41112515LOC120097100uncharacterized LOC120097100151522076115222162Rat
9318927LOC103693285uncharacterized LOC103693285151524772515256275Rat
41193585LOC120096926uncharacterized LOC120096926151556233615586644Rat
41083093LOC120097307U6 spliceosomal RNA151561831815618421Rat
41130487LOC120097127uncharacterized LOC120097127151585795115862958Rat
41074142Tex264-ps1testis expressed 264, pseudogene 1151590361215907788Rat
11511431LOC108352892uncharacterized LOC108352892151591094915957267Rat
41278283LOC120096927uncharacterized LOC120096927151622563916231061Rat
1359720Cfap20dcCFAP20 domain containing151623124816476978Rat
11425507LOC108353016uncharacterized LOC108353016151623342816247909Rat
41365081LOC120097253small nucleolar RNA SNORA17151641693016417062Rat
7712935LOC102548458uncharacterized LOC102548458151650831016527903Rat
1305512Fam3dFAM3 metabolism regulating signaling molecule D151653888116574468Rat
41377260LOC120096928uncharacterized LOC120096928151654171016603322Rat
1306327Fam107afamily with sequence similarity 107, member A151660836216630398Rat
41216872LOC120096930uncharacterized LOC120096930151663102716644852Rat
628684Acox2acyl-CoA oxidase 2151666058416692160Rat
1308208Kctd6potassium channel tetramerization domain containing 6151669529716712460Rat
9105567Hspe1-ps2heat shock protein family E (Hsp10) member 1, pseudogene 2151672127416721897Rat
1359146Pdhbpyruvate dehydrogenase E1 subunit beta151675256116758503Rat
727819PxkPX domain containing serine/threonine kinase like151675985716828452Rat
1305436Rpp14ribonuclease P/MRP subunit p14151683779616847970Rat
1359323Abhd6abhydrolase domain containing 6, acylglycerol lipase151685974016907094Rat
620669Dnase1l3deoxyribonuclease 1L3151692233516948322Rat
9449921LOC103693818uncharacterized LOC103693818151695304616973707Rat
11505803Atp6v1fnblATP6V1F neighbor like151695412816958243Rat
1311915Flnbfilamin B151696199917095059Rat
1591918Rps19-ps15ribosomal protein S19, pseudogene 15151711959617120032Rat
2323175PotehPOTE ankyrin domain family member H151713158217219924Rat
1598365Utp4-ps1UTP4 small subunit processome component, pseudogene 1151721924717221380Rat
7649706Rfc5-ps2replication factor C subunit 5, pseudogene 2151722510417226112Rat
2323018Ube2g1l1ubiquitin-conjugating enzyme E2G 1 like 1151726383817266304Rat
40995200LOC120096933uncharacterized LOC120096933151730729017373486Rat
619707Ptgdrprostaglandin D2 receptor151736030417367679Rat
1589068Galnt12-ps4polypeptide N-acetylgalactosaminyltransferase 12, pseudogene 4151756320417564802Rat
41376748LOC120096936disks large homolog 5-like151761346617621079Rat
11453876LOC108349347disks large homolog 5-like151763582417643786Rat
1590180Rrs1-ps14ribosome biogenesis regulator 1 homolog, pseudogene 14151765358817662311Rat
7619317LOC102554774disks large homolog 5-like151766257517669537Rat
41098740LOC120096937disks large homolog 5-like151767857017691607Rat
11474029Glrxl1glutaredoxin like 1151769492517700549Rat
1359579Spetex2fSpetex-2F protein151771631517720203Rat
7600849Glrx-ps16glutaredoxin, pseudogene 16151772928117733791Rat
7677163LOC102550211disks large homolog 5-like151773705717742754Rat
41329473LOC120093102disks large homolog 5-like151775971917791248Rat
41010761Galnt12-ps3polypeptide N-acetylgalactosaminyltransferase 12, pseudogene 3151776807117779005Rat
41174358LOC120093146disks large homolog 5-like151788838917895433Rat
41080219LOC120096939disks large homolog 5-like151790761717914650Rat
9305593Dlg5l9discs large MAGUK scaffold protein 5 like 9151792943017948524Rat
40980376LOC120096938disks large homolog 5-like151795423417961479Rat
41113905Rrs1-ps5ribosome biogenesis regulator 1 homolog, pseudogene 5151796175917969281Rat
41118835LOC120093162disks large homolog 5-like151797642117983758Rat
1561032Dlgap5l2DLG associated protein 5 like 2151802953118036669Rat
6494161Galnt12-ps2polypeptide N-acetylgalactosaminyltransferase 12, pseudogene 2151804621018048369Rat
41301532LOC120096940disks large homolog 5-like151805250718060069Rat
1565108Ptgdrl1prostaglandin D2 receptor-like 1151807235718081452Rat
41276740Snip1-ps2Smad nuclear interacting protein 1, pseudogene 2151815466818167161Rat
41383513LOC120096941uncharacterized LOC120096941151819167718196835Rat
620020Ptger2prostaglandin E receptor 2151821501318228714Rat
41081032LOC120096942uncharacterized LOC120096942151822224318227421Rat
2320523Rps10l6ribosomal protein S10 like 6151830828718309139Rat
1306755Txndc16thioredoxin domain containing 16151835168818425833Rat
1563070Gpr137cG protein-coupled receptor 137C151842593918492588Rat
41118851Rcor2-ps1REST corepressor 2, pseudogene 1151848050018484489Rat
621713Ero1aendoplasmic reticulum oxidoreductase 1 alpha151849503718530440Rat
1308825Psmc6proteasome 26S subunit, ATPase 6151854258518564057Rat
1594806Styxserine/threonine/tyrosine interacting protein151856521418595797Rat
6907482LOC689246farnesyl diphosphate synthase pseudogene151858062818581731Rat
1563144Gnpnat1glucosamine-phosphate N-acetyltransferase 1151859618018608854Rat
1311799Fermt2FERM domain containing kindlin 2151868292718751959Rat
41249242LOC120097298U6 spliceosomal RNA151870910218709208Rat
11412987Rps29-ps19ribosomal protein S29, pseudogene 19151879712018797499Rat
11410863LOC108352894uncharacterized LOC108352894151881434118824385Rat
1308576Ddhd1DDHD domain containing 1151882438918891036Rat
11519152LOC108352895uncharacterized LOC108352895151889116418893398Rat
7523542LOC102547310uncharacterized LOC102547310151892894018969883Rat
41379851LOC120097288U4 spliceosomal RNA151903861319038748Rat
41228660LOC120097169uncharacterized LOC120097169151908453319086461Rat
41230819LOC120096947uncharacterized LOC120096947151909478719185315Rat
40932172LOC120096948uncharacterized LOC120096948151912171519145141Rat
41360619LOC120097285U2 spliceosomal RNA151942710919427295Rat
11391179LOC108352896uncharacterized LOC108352896151953582919559379Rat
2213Bmp4bone morphogenetic protein 4151961853819633494Rat
7548933LOC102548186uncharacterized LOC102548186151963358419644931Rat
41325057LOC120096949uncharacterized LOC120096949151968249419694414Rat
41162727LOC120096951uncharacterized LOC120096951151969718219706733Rat
9134621Mrps16-ps2mitochondrial ribosomal protein S16, pseudogene 2151977187819772280Rat
1307781Cdkn3cyclin-dependent kinase inhibitor 3152002252220033948Rat
1312030Cnih1cornichon family member 1152003788520049857Rat
70910Gmfbglia maturation factor, beta152006992320081005Rat
620803Cgrrf1cell growth regulator with ring finger domain 1152008856420109042Rat
9312086Rpl39-ps11ribosomal protein L39, pseudogene 11152011877820119125Rat
7744850LOC102548367uncharacterized LOC102548367152012944820136437Rat
1310361Samd4asterile alpha motif domain containing 4A152013599420352131Rat
61992Gch1GTP cyclohydrolase 1152040426720437727Rat
7580218LOC102548428uncharacterized LOC102548428152045400620462954Rat
1310200Wdhd1WD repeat and HMG-box DNA binding protein 1152047831020523106Rat
41089018LOC120097314U6 spliceosomal RNA152051614620516249Rat
1306503Socs4suppressor of cytokine signaling 4152052340620537889Rat
1311455Mapk1ip1lmitogen-activated protein kinase 1 interacting protein 1-like152054504320571466Rat
41003493LOC120097123uncharacterized LOC120097123152058538620587055Rat
1564783Tpt1-ps8tumor protein, translationally-controlled 1 pseudogene 8152060891620610628Rat
69356Lgals3galectin 3152062008320632019Rat
1311247Dlgap5DLG associated protein 5152063396420664569Rat
41200698LOC120096955uncharacterized LOC120096955152069380220712131Rat
1310108Fbxo34F-box protein 34152071939520787905Rat
1304610Atg14autophagy related 14152079575020827113Rat
11519001LOC108352900uncharacterized LOC108352900152083051920850418Rat
41303421Atp5pb-ps3ATP synthase peripheral stalk-membrane subunit b, pseudogene 3152088295920907232Rat
1308719Ktn1kinectin 1152091366521002588Rat
41229534LOC120097197U6 spliceosomal RNA152092278920922889Rat
41066627LOC1200971925S ribosomal RNA152104235821042476Rat
41060763LOC120096956uncharacterized LOC120096956152123525221238947Rat
41351628LOC120097291U1 spliceosomal RNA152123975621239919Rat
1565884Peli2pellino E3 ubiquitin protein ligase family member 2152139326221537737Rat
7670321LOC102554413uncharacterized LOC102554413152159278421599148Rat
41244735LOC120097124uncharacterized LOC120097124152169280721705255Rat
1562018Tmem260transmembrane protein 260152173411921804049Rat
7731716LOC102554609uncharacterized LOC102554609152186802821875582Rat
41121801LOC120097203U6 spliceosomal RNA152193817321938279Rat
1305705Otx2orthodenticle homeobox 2152194223321953034Rat
41082665LOC120097200U6 spliceosomal RNA152206041822060529Rat
7618438Hdac1-ps14Histone deacetylase 1, pseudogene 14152206126022063592Rat
41301128Brix1-ps2biogenesis of ribosomes BRX1, pseudogene 2152215956622162239Rat
708408Exoc5exocyst complex component 5152231068222355695Rat
1308087Ap5m1adaptor related protein complex 5 subunit mu 1152235547822385222Rat
1559923Naa30N(alpha)-acetyltransferase 30, NatC catalytic subunit152245491422474789Rat
7568824Ccdc198coiled-coil domain containing 198152250018122527011Rat
1561109Slc35f4solute carrier family 35, member F4152257226622833646Rat
7591538LOC102556222uncharacterized LOC102556222152266220922687589Rat
1310110Armh4armadillo-like helical domain containing 4152297589523076986Rat
1586355Odad2-ps1outer dynein arm docking complex subunit 2, pseudogene 1152309650023112386Rat
1334059Or4n5olfactory receptor family 4 subfamily N member 5152316775023168676Rat
41038239Rapgef5-ps1Rap guanine nucleotide exchange factor 5, pseudogene 1152318221423188478Rat
1332610Or4l1olfactory receptor family 4 subfamily L member 1152319070223191631Rat
1334075Or4k15colfactory receptor family 4 subfamily K member 15C152323927623240247Rat
1334431Or4k15olfactory receptor family 4 subfamily K member 15152327330323274277Rat
41029303Or4k1l1olfactory receptor family 4 subfamily K member 1 like 1152329151423292449Rat
1333529Or4k1olfactory receptor family 4 subfamily K member 1152331154523312480Rat
1334248Or4k5olfactory receptor family 4 subfamily K member 5152332834923329320Rat
1333964Or4k2olfactory receptor family 4 subfamily K member 2152340472423405677Rat
1333849Or4k6olfactory receptor family 4 subfamily K member 6152342906723436072Rat
1333453Olr1610olfactory receptor 1610152348021623481142Rat
1333578Or4n4olfactory receptor family 4 subfamily N member 4152349456323495554Rat
1333393Or4m1olfactory receptor family 4 subfamily M member 1152350721323508154Rat
1561412Or4q3olfactory receptor family 4 subfamily Q member 3152353102923535992Rat
1564460Tlr11toll-like receptor 11152354540823549849Rat
1333269Or11j4olfactory receptor family 11 subfamily J member 4152357515323576091Rat
1333946Or11g1olfactory receptor family 11 subfamily G member 1152360074723615598Rat
1333242Or11g24olfactory receptor family 11 subfamily G member 24152361088123636754Rat
1332642Or11g26bolfactory receptor family 11 subfamily G member 26B152361088823648659Rat
9076871Or11g26olfactory receptor family 11 subfamily G member 26152369806923699004Rat
1332633Or11g27olfactory receptor family 11 subfamily G member 27152371424223715177Rat
1333151Or11g2olfactory receptor family 11 subfamily G member 2152377041723771391Rat
1585157Rfk-ps2riboflavin kinase, pseudogene 2152377203523773533Rat
1562558Cycsl3cytochrome c, somatic like 3152377766223777958Rat
1334349Or11h6olfactory receptor family 11 subfamily H member 6152379165423792640Rat
1334259Or11h23bolfactory receptor family 11 subfamily H member 23B152380659423807532Rat
1333609Olr1623-psolfactory receptor pseudogene 1623152382324823824189Rat
1333318Or11h4colfactory receptor family 11 subfamily H member 4C152384989023850864Rat
1334182Or11h4dolfactory receptor family 11 subfamily H member 4D152386425023865224Rat
1333781Olr1633olfactory receptor 1633152389357423894506Rat
1332975Or11h23-ps1olfactory receptor family 11 subfamily H member 23, pseudogene 1152391640323917344Rat
1333574Or11h4olfactory receptor family 11 subfamily H member 4152394699123947977Rat
1311284Ttc5tetratricopeptide repeat domain 5152399304624010710Rat
1561930Ccnb1ip1cyclin B1 interacting protein 1152401490524031357Rat
41018912LOC120096960uncharacterized LOC120096960152402117624029113Rat
41210769LOC120097276small nucleolar RNA SNORD126152402533624025412Rat
3580Rpph1ribonuclease P RNA component H1152403367924033935Rat
1310568Parp2poly (ADP-ribose) polymerase 2152403406924044340Rat
3869Tep1telomerase associated protein 1152404587624093526Rat
2324282Klhl33kelch-like family member 33152410592324114445Rat
1308578OsgepO-sialoglycoprotein endopeptidase152413714924144568Rat
41219903LOC120097204U6 spliceosomal RNA152413985824139961Rat
2126Apex1apurinic/apyrimidinic endodeoxyribonuclease 1152414459524146785Rat
1307475Pip4p1phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1152414685424150739Rat
1597189Pnppurine nucleoside phosphorylase152417060724178269Rat
7681411Rpl23a-ps12ribosomal protein L23a, pseudogene 12152420959624211505Rat
1310415Rnase10ribonuclease A family member 10152422668724229149Rat
1582886Ahcy-ps6adenosylhomocysteinase, pseudogene 6152424875424250240Rat
41139018Psma7-ps2proteasome 20S subunit alpha 7, pseudogene 2152424984624259238Rat
1359501Rnase9ribonuclease A family member 9152425952524263079Rat
1359723Rnase11ribonuclease A family member 11152426820624270192Rat
1307829Rnase12ribonuclease A family member 12152427576724286843Rat
11369411Trnal-aag4transfer RNA leucine (anticodon AAG) 4152428383824283919Rat
11502728Trnap-agg15transfer RNA proline (anticodon AGG) 15152428485524284926Rat
11384787Trnat-ugu3transfer RNA threonine (anticodon UGU) 3152428520624285278Rat
1333368Or6s1olfactory receptor family 6 subfamily S member 1152429154024292535Rat
11505416Trnal-uag3transfer RNA leucine (anticodon UAG) 3152430635424306435Rat
11449368Trnat-ugu4transfer RNA threonine (anticodon UGU) 4152431031324310385Rat
11516574Trnay-gua4transfer RNA tyrosine (anticodon GUA) 4152431119224311280Rat
11441768Trnap-ugg6transfer RNA proline (anticodon UGG) 6152431228124312352Rat
1594539Angangiogenin152431271124323361Rat
61823Rnase4ribonuclease A family member 4152431276524330112Rat
1310106Rnase1l1ribonuclease, RNase A family, 1-like 1152433821624339934Rat
631349Eddm3bepididymal protein 3B152434399224346759Rat
1303020Rnase6ribonuclease A family member 6152435430524357289Rat
3574Rnase1ribonuclease A family member 1, pancreatic152436192424363633Rat
41166970LOC120096962uncharacterized LOC120096962152436743124374433Rat
9083009H3f3a-ps6H3.3 histone A, pseudogene 6152437716724377580Rat
9134184Eddm3aepididymal protein 3A152438558524386643Rat
1359373Ang2angiogenin, ribonuclease A family, member 2152439833024415909Rat
1565230Rnase1l2ribonuclease, RNase A family, 1-like 2152442182524423513Rat
41145080LOC120096963uncharacterized LOC120096963152442791724445115Rat
1359432Rnase2ribonuclease A family member 2152444961824450427Rat
41226141Snora84small nucleolar RNA, H/ACA box 84152446153724461669Rat
2324569Ear1l1eosinophil-associated, ribonuclease A family, member 1 like 1152448682724487702Rat
1359245Rnase17ribonuclease 17152449917824500140Rat
621580Rnase3ribonuclease A family member 3152451189424512764Rat
2319312LOC100361866eosinophil cationic protein-like152453570124536571Rat
1590796Rnase-psribonuclease pseudogene152455058124550842Rat
2324564Ear1eosinophil-associated, ribonuclease A family, member 1152455528024556189Rat
1559895Mettl17methyltransferase like 17152458229624589029Rat
1306291Slc39a2solute carrier family 39 member 2152459073824592850Rat
621874Ndrg2NDRG family member 2152460098124609621Rat
1566185Tppp2tubulin polymerization-promoting protein family member 2152461428424627123Rat
1359386Rnase13ribonuclease A family member 13152461820924618670Rat
2318964Snrpc-ps7small nuclear ribonucleoprotein polypeptide C, pseudogene 7152466695924667414Rat
1308093Arhgef40Rho guanine nucleotide exchange factor 40152467264524696510Rat
1359259Zfp219zinc finger protein 219152469583124710039Rat
1597322Tmem253transmembrane protein 253152470651724709107Rat
1597308Rpl31l10ribosomal protein L31 like 10152473267124733107Rat
1333383Or5au1olfactory receptor family 5 subfamily AU member 1152473687224742314Rat
7644944LOC102553296uncharacterized LOC102553296152474514824766868Rat
1309982Hnrnpcheterogeneous nuclear ribonucleoprotein C152477959324809213Rat
1310807Rpgrip1RPGR interacting protein 1152481457624867522Rat
41166823LOC120096964uncharacterized LOC120096964152483111824837903Rat
1310032Supt16hSPT16 homolog, facilitates chromatin remodeling subunit152486769724904818Rat
41150897Rpl9-ps29ribosomal protein L9, pseudogene 29152489375824897021Rat
620696Chd8chromodomain helicase DNA binding protein 8152490578924965461Rat
41338009Snord8small nucleolar RNA, C/D box 8152491783624917945Rat
1309117Rab2bRAB2B, member RAS oncogene family152496836424988990Rat
41266403LOC120097299U6 spliceosomal RNA152498361724983723Rat
41207541Snora72l1small nucleolar RNA, H/ACA box 72 like 1152498605024986142Rat
708449Tox4TOX high mobility group box family member 4152498924625002833Rat
1311750Mettl3methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit152500250525014097Rat
1309272Sall2spalt-like transcription factor 2152502134525038918Rat
1333903Or10g3colfactory receptor family 10 subfamily G member 3C152507801325078954Rat
1596064Rps19-ps4ribosomal protein S19, pseudogene 4152509588425096408Rat
1334263Or10g3olfactory receptor family 10 subfamily G member 3152509867425099615Rat
1333427Or10g1bolfactory receptor family 10 subfamily G member 1B152512783325128789Rat
1333016Or10g1olfactory receptor family 10 subfamily G member 1152514561925146575Rat
1334073Or4e2olfactory receptor family 4 subfamily E member 5152518763325188559Rat
41380642Pcnp-ps2PEST proteolytic signal containing nuclear protein, pseudogene 2152519055525195935Rat
1334197Or4e1olfactory receptor family 4 subfamily E member 2152520136925211302Rat
40932640LOC102555050uncharacterized LOC102555050152521157425295797Rat
1333503Or4e5olfactory receptor family 4 subfamily E member 14152522754425228549Rat
11431278LOC108352987nucleophosmin pseudogene152541932825419858Rat
1588615Hsp90aa1-ps15heat shock protein 90 alpha family class A member 1, pseudogene 15152541989625422210Rat
1564212Trav12-3T cell receptor alpha variable 12-3152550387125504883Rat
2318716Travl1T cell receptor alpha variable like 1152564400425644621Rat
2321661Travl2T cell receptor alpha variable like 2152568650225689205Rat
2322894Trav13-1lT cell receptor alpha variable 13-1 like152570772925708431Rat
11446160LOC688340T-cell receptor alpha chain V region PHDS58-like152581598025817804Rat
9441284Travl-ps1T cell receptor alpha variable like, pseudogene 1152606313326063690Rat
11051997LOC102551082T-cell receptor alpha chain V region CTL-F3-like152617576026176516Rat
6498285Trav22lT cell receptor alpha variable 22 like152618201326183640Rat
2324834Trav14d-3-dv8l2T cell receptor alpha variable 14D-3-DV8 like 2152618810626189153Rat
2323935TrdclT cell receptor delta constant like152619563027586889Rat
9298430Travl-ps2T cell receptor alpha variable like, pseudogene 2152632910926329666Rat
41368724LOC120097283U2 spliceosomal RNA152643813626438252Rat
2323880Trav9-2l2T cell receptor alpha variable 9-2 like 2152650398126504742Rat
2320078Trav14d-3-dv8l1T cell receptor alpha variable 14D-3-DV8 like 1152653060626531260Rat
6489577Trav6-1T cell receptor alpha variable 6-1152671227926713004Rat
2320537Trav9-2l1T cell receptor alpha variable 9-2 like 1152707443027075166Rat
9372979LOC103693549uncharacterized LOC103693549152721336527239561Rat
41202618LOC120096971developmental pluripotency-associated protein 3-like152722432927232700Rat
7566116LOC102547139uncharacterized LOC102547139152726028527267601Rat
11454121Trav34lT cell receptor alpha variable 34 like152732745627329554Rat
11405771LOC108353024uncharacterized LOC108353024152749159427502513Rat
11481998LOC108353025uncharacterized LOC108353025152750357227514816Rat
9255449LOC103693543uncharacterized LOC103693543152754865127551186Rat
621028Dad1defender against cell death 1152767728627697120Rat
1311858Abhd4abhydrolase domain containing 4, N-acyl phospholipase B152769738427716013Rat
1333203Or6e1olfactory receptor family 6 subfamily E member 1152773388127734825Rat
7629119LOC102550121uncharacterized LOC102550121152777170627775581Rat
11442880LOC108352920uncharacterized LOC108352920152778432127785920Rat
1585024Oxa1lOXA1L, mitochondrial inner membrane protein152781368827821319Rat
619902Slc7a7solute carrier family 7 member 7152782208827873121Rat
1309297Mrpl52mitochondrial ribosomal protein L52152788277727886131Rat
620198Mmp14matrix metallopeptidase 14152788779527897020Rat
7703147LOC102550180uncharacterized LOC102550180152791513627916745Rat
1310471Lrp10LDL receptor related protein 10152792133527927507Rat
69081Rem2RRAD and GEM like GTPase 2152793395027938429Rat
1309053Prmt5protein arginine methyltransferase 5152796889327978291Rat
11379491Trnar-acg3transfer RNA arginine (anticodon ACG) 3152797861127978683Rat
1305288Haus4HAUS augmin-like complex, subunit 4152799453028006147Rat
620407Ajubaajuba LIM protein152801977528031537Rat
1565222C15h14orf93similar to human chromosome 14 open reading frame 93152803756728064347Rat
61879Psmb5proteasome 20S subunit beta 5152807277228077367Rat
41145338Trnaa-agc93transfer RNA alanine (anticodon AGC) 93152807907128079145Rat
1308773Psmb11proteasome subunit beta 11152808473628085655Rat
41254423LOC120097300U6 spliceosomal RNA152808918328089289Rat
1560161Cdh24cadherin 24152809157828101330Rat
1311945Acin1apoptotic chromatin condensation inducer 1152810211228147001Rat
1308430C15h14orf119similar to human chromosome 14 open reading frame 119152814636828151422Rat
1560492Ciropciliated left-right organizer metallopeptidase152815101828158149Rat
2329CebpeCCAAT/enhancer binding protein epsilon152816971128171471Rat
41121122LOC120096982uncharacterized LOC120096982152817170828189041Rat
619904Slc7a8solute carrier family 7 member 8152818301328242717Rat
7500178Rnf212bring finger protein 212B152827462928321093Rat
11492422Cebpzos-ps2CEBPZ opposite strand, pseudogene 2152829496728295781Rat
41368185LOC120097296U6 spliceosomal RNA152830200028302106Rat
628904Homezhomeobox and leucine zipper encoding152832163328339486Rat
620717Bcl2l2Bcl2-like 2152834644928361627Rat
1583926Ppp1r3eprotein phosphatase 1, regulatory subunit 3E152834844328349603Rat
619928Pabpn1poly(A) binding protein, nuclear 1152836810028372712Rat
631405Slc22a17solute carrier family 22, member 17152838228528389435Rat
1308966Efsembryonal Fyn-associated substrate152839241728403016Rat
1561632Il25interleukin 25152840876628412157Rat
1307045Cmtm5CKLF-like MARVEL transmembrane domain containing 5152841262428415304Rat
62029Myh6myosin heavy chain 6152841812028442316Rat
11490917LOC108352923uncharacterized LOC108352923152842530128430159Rat
4888611Mir3546microRNA 3546152842555428425669Rat
7489029Mir208amicroRNA 208a152842557028425652Rat
40950308LOC120096985uncharacterized LOC120096985152844442228454385Rat
62030Myh7myosin heavy chain 7152844655028469888Rat
4888543Mir208bmicroRNA 208b152845163828451749Rat
40959203LOC120096984uncharacterized LOC120096984152845729528481725Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10877D15Mgh1148152591712825917277Ratregion
34453D15Mgh7132151672552816725660Ratregion
33614D15Mit2127151448116514481294Ratregion
33713D15Mit3201151736289717363086Ratregion
33713D15Mit3201151807856318078771Ratregion
36313D15Rat5210151985656619856776Ratregion
35350D15Rat3143152008692420087067Ratregion
35417D15Rat130166152192574621925910Ratregion
37106D15Rat31211152271177322711984Ratregion
37702D15Rat66194151918667419186868Ratregion
35120D15Rat6182152803066528030847Ratregion
38114D1Rat172267152214124322141514Ratregion
38206D15Rat62195152084273020842925Ratregion
40172D15Rat111152152120826021208412Ratregion
41234D15Rat81146152419760424197750Ratregion
43038D15Rat168249151453751514537769Ratregion
42400D15Rat160242152238599022386232Ratregion
42401D15Rat161236152244268622442922Ratregion
40980D15Rat85235152803061228030847Ratregion
41564D15Rat80177152280624022806419Ratregion
41592D15Rat83177152795386127954038Ratregion
41840D15Rat138202151688757316887753Ratregion
45239D15Got13186151600275416002937Ratregion
60086D15Got105101151736288817362989Ratregion
60086D15Got105101151807870118078780Ratregion
60092D15Got2495151877111018771207Ratregion
60093D15Got26157151835347218353629Ratregion
60094D15Got29296151971114519711443Ratregion
60095D15Got30167152015039820150565Ratregion
60096D15Got32181152667184626672006Ratregion
60096D15Got32181152690100826901109Ratregion
45241D15Got25184151861397418614158Ratregion
45242D15Got27187151937729919377486Ratregion
45247D15Got36128152447499824475126Ratregion
45248D15Got28290152444934824449638Ratregion
45249D15Got41123152396167023961793Ratregion
45253D15Got39113152585925525859367Ratregion
625834D15Got108159152275358422753743Ratregion
62455D15Uia5190152312034423120534Ratregion
62462D15Uia6308152104770421048004Ratregion
66454D15Uia7197151608473316084930Ratregion
66455D15Uia8232152060884920609081Ratregion
66542D15Mco12247152133858821338835Ratregion
66543D15Mco13210152775055027750760Ratregion
1630387D15Got234266152504924825049514Ratregion
1631540D15Wox10134152818474628184880Ratregion
1639050D15Got239252151877109618771350Ratregion
1640972D15Wox11262152044022320440482Ratregion
1632638D15Ulb1128151966061819660746Ratregion
1632676D15Ulb2122151966061819660740Ratregion
1640031D15Got203216152501480025015016Ratregion
1633896D15Got202222152215677522156997Ratregion
1634645D15Wox7111152161434521614456Ratregion
7205948Myh7173152844912428449397Ratregion
7192348Bmp4394151961952619620924Ratregion
5035765RH25245132152100223321002365Ratregion
5035869PMC263842P1209152194434921944558Ratregion
5035903PMC304098P1211152194434721944558Ratregion
5038980RH127443184152432972924329913Ratregion
7206574UniSTS:547105931152459238824593318Ratregion
5039238RH127591184152399329423993478Ratregion
5036861AU049441219151601845516018673Ratregion
5036861AU049441219151601845516018674Ratregion
5033907RH140569199152846637328466572Ratregion
5026028RH130631195152056781820568013Ratregion
5028667RH91125156152789677227896928Ratregion
7206158Bmp4114151962097619621090Ratregion
7206250Gmfb714152006995720070671Ratregion
5031398PMC156609P198151962214719622245Ratregion
5031678AU047515155151475132814751483Ratregion
5034181RH141675219152056089920561118Ratregion
5029067RH143391100151853031018530410Ratregion
5034351WI-14045127152490580024905927Ratregion
5034520BI274360103152815107928151182Ratregion
5034596BF416962152151642694516427097Ratregion
5026748RH133381197152769160927691806Ratregion
5032171RH126115226152079577020795997Ratregion
5029593BI283646529152841815328418682Ratregion
5029613BE101600177152834594028346117Ratregion
5029621BF386303192152021486920215061Ratregion
5032471D14Ertd500e272152799459727994869Ratregion
5035422BQ208140163151913152319131686Ratregion
5029795BF387312182152834788428348066Ratregion
5034910AI236262166152500187925002045Ratregion
5027471AW32245596152247446722474563Ratregion
5027473AU016300145152799468227994827Ratregion
5030127BI286324167152789681227896979Ratregion
5025120BB256399104152194322821943332Ratregion
5025122AW557067150152768528727685437Ratregion
5025202RH127408180151675821016758390Ratregion
5033225RH138044129152732837927328509Ratregion
5025306RH127813210152417778924177999Ratregion
5025432RH128294199152040257220402771Ratregion
5030713BE107704189152841774428417933Ratregion
5033447RH138869140152296798922968129Ratregion
5025556RH128777184152251299022513174Ratregion
5028163D14Mit129139151961875819618897Ratregion
5028167D14Mit183189152469953624699725Ratregion
5033521RH139134250152785025327850503Ratregion
5033763RH140031211152414690824147119Ratregion
5025832RH129861215152078683120787046Ratregion
5028559AA96055597151868305818683155Ratregion
5031127AI045774985152788453727885522Ratregion
5051989RH94775183152817049728170680Ratregion
5051264RH134534211151868303518683246Ratregion
5056003RH144127101151544235815442459Ratregion
5051539AI325305108152789621127896319Ratregion
5056539RH144437138151849000018490138Ratregion
5057083AA859789180152003222520033856Ratregion
5054145RH143056221151684250016842721Ratregion
5057530BE095473166152008043620080602Ratregion
5052135RH94860211151961874919618960Ratregion
5055273RH143706194152003829620038490Ratregion
5054825RH143447287152092781120928098Ratregion
5055099RH143605132152056808520568217Ratregion
5056227RH144256105151964469819644803Ratregion
5058098BE101980155152843145028431605Ratregion
5058868BF393768169152491158824911757Ratregion
5058990BE102691177152123940621239583Ratregion
5052951RH142368199151669537916695578Ratregion
5060034BF388306165151685785116858016Ratregion
5058218BF419007105151889326018893365Ratregion
5058328AI136647218152100228821002507Ratregion
5050308RH133981199152497012824970327Ratregion
5053837RH142879128152785047127850599Ratregion
5049886RH133738150152500321225003362Ratregion
5051056RH134413192151657278816572980Ratregion
5050422RH134047180151822890118229081Ratregion
5043400RH130004186152839251728392703Ratregion
5045910RH131449183152803773028037913Ratregion
5044668RH130735183151694804116948225Ratregion
5046332RH131692181151859663518596816Ratregion
5044394RH130577214152401500124015215Ratregion
5045428RH131172209152838238228382591Ratregion
5046452RH131761202152257245022572652Ratregion
5047428RH132322194152006744020067634Ratregion
5046632RH131865190152180180221801992Ratregion
5049086RH133278152152817948128179633Ratregion
5049086RH133278152152817948128179633Ratregion
5049106RH133289215152771571427715929Ratregion
5046824RH131975208152801986928020077Ratregion
5046824RH131975208152801986928020077Ratregion
5046876RH132005214152799466227994876Ratregion
5047128RH132149210152781603327816243Ratregion
5039326RH127642183151696203516962218Ratregion
5042140RH129263209152040256720402776Ratregion
5047274RH132233180152258575122585931Ratregion
5048342RH132848206151858464818584854Ratregion
5048498RH132938187152009723720097424Ratregion
5048666RH133035184152435696024357144Ratregion
5039394RH127680185151835210718352292Ratregion
5039418RH127694210152063085020631876Ratregion
5043002RH129772207152771671327716920Ratregion
5042312RH129362196152460124224601438Ratregion
5043572RH130102161152460101224601173Ratregion
5040064RH128069200152807279528072995Ratregion
7192199Otx2455152194405821944513Ratregion
7192200Otx2102152194405821944160Ratregion
5042638RH129554207152815117028151377Ratregion
5041030RH128623216152247434522474561Ratregion
5040512RH128326198152818308528183283Ratregion
5041348RH128805188151685990316860091Ratregion
5075006RH138344136151662871316628849Ratregion
5075064RH138378172152297151122971683Ratregion
5075172RH138440169152812331728123486Ratregion
5075646RH138715206152844051628440722Ratregion
5074362RH137973171151676997616770147Ratregion
5075892RH138857241152750707927507320Ratregion
5074776RH138212120152469592624696046Ratregion
5074998RH138340226152180367821803904Ratregion
5075080RH138387183152486740224867585Ratregion
5079400RH140974201152500255725002758Ratregion
5079450RH141004180152782099127821171Ratregion
5075758RH138780475152459215624592631Ratregion
5076316RH139105212152461218224612394Ratregion
5077294RH139674193152252336022523553Ratregion
5077822RH139979186152173560221735788Ratregion
5078040RH140108170151859624118596411Ratregion
5079710RH141158218152410629124106509Ratregion
5077534RH139811204151856371018563914Ratregion
5078574RH140422177152186771121867888Ratregion
5079910RH141273181152812331728123498Ratregion
5079926RH141282287152458864924588936Ratregion
5079042RH140701337152417833424178671Ratregion
5079320RH140915244152460101824601262Ratregion
5080242RH141467181152771811527718296Ratregion
5078702RH140500113151857748118577594Ratregion
5072932RH137137151152839244828392599Ratregion
5071768RH135273205152491287524913080Ratregion
5072130RH136668210152450553624505745Ratregion
5072130RH136668210152452935724529566Ratregion
5072130RH136668210152456165424561864Ratregion
5073472RH137456181152194223221942413Ratregion
5073528RH137488217152282605722826274Ratregion
5072264RH136748185152194322921943414Ratregion
5074696RH138165136151723203417232170Ratregion
5074732RH138186246151713134417131590Ratregion
5071710RH135239180151707373717073917Ratregion
5061752AI715540299152841494228415241Ratregion
5063354BE107599198151639739416397592Ratregion
5066862AU048107252152384872423848976Ratregion
5067560AU047671127151524400115244128Ratregion
5068824AU046903128151511735115117479Ratregion
5069214AU046643135151511733015117465Ratregion
5070382AV06542592151686072016860812Ratregion
5070384AV06708385151657278016572865Ratregion
5070388AI447922142152247211522472257Ratregion
5065192BE121117151151708659817086749Ratregion
5065252BE121284185151883646418836649Ratregion
5065304AI535165168152238065822380826Ratregion
5065326BI297004162151676067116760833Ratregion
5064030BE120481153151882289618823049Ratregion
5060802AI073030194152810220528102399Ratregion
5064166BE120707175152841195928412134Ratregion
5065878AA997586208152486776624867974Ratregion
5062206BE106323151152815173028151881Ratregion
5065720BF406292193152153323221533425Ratregion
5061142AW526395171151646691016467081Ratregion
5064608AI501734184152758656327586747Ratregion
5066200AI576082163152502135725021520Ratregion
5066296PMC140661P1188152502372725023915Ratregion
5063162BF398432167152238490122385068Ratregion
5066476AU048334196151465560614655802Ratregion
5084384AI408901187152754870627548893Ratregion
5087588PMC34552P3300151961931019619610Ratregion
5087716Bcl2l20152835804628358825Ratregion
5089773AU049355226151914949019149718Ratregion
5089779AU049358219152579979725800018Ratregion
5089783AU049361145152017864720178796Ratregion
5089153AU048986107151894904718949083Ratregion
5089883AU049420235151592298115923216Ratregion
5083879AA893114241152010880220109043Ratregion
5083956AI012084146152048946520489611Ratregion
5084190AI012618114152662933126629445Ratregion
5081705BF414877188152029695120297139Ratregion
5084696AI17910195151868399218684087Ratregion
5090055AU049523194151622055216220746Ratregion
5084844AI170945154152759006027590214Ratregion
5088439AU048570159152206902622069185Ratregion
5088653AU048697146151672551116725657Ratregion
5088667AU048705231152422261424222842Ratregion
5081056RH141939185152531398425314169Ratregion
5081264RH142060201151858055618580757Ratregion
5085669AW535555195152048069920480894Ratregion
5090111AU049556138152829709428297232Ratregion
5083001BF390601150152258638822586538Ratregion
5086317AW529791155152079581920795974Ratregion
5085637BM390674220151647614716476367Ratregion
5083425BF391109107151807237218072479Ratregion
5083785AI599520148151849324418493392Ratregion
5502903Ndrg2832152460101024601842Ratregion
5503134MYH6404152843863028439034Ratregion
5503152TEP1192152406659024066782Ratregion
5507612Cebpe1052152816988128170933Ratregion
5504502PMC24284P1958152816989228170850Ratregion
5505249Bmp40151961917319620744Ratregion
5505343Otx2os1980152195459021955570Ratregion
5505510D19S9151032151767699917678572Ratregion
5505818UniSTS:4955221073152520257325203646Ratregion
5505947UniSTS:496641362151962072719621089Ratregion
5505690UniSTS:489347936152363395323634889Ratregion
5506011UniSTS:497280235151961950819620747Ratregion
5506565OTX2_1019918152194362221944540Ratregion
5506945REN38985254151929079719291051Ratregion
5507325UniSTS:99121110152769687627696986Ratregion
5501417Otx21213152194666821947881Ratregion
5502162MARC_7201-7202:996687628:3405152469343224693838Ratregion
5500149UniSTS:237185186152815058328150769Ratregion
5502417RH124773147152818318828183335Ratregion
5500955MARC_9867-9868:996688667:1239152789520027896218Ratregion
5501209PMC15475P1243152757215927572402Ratregion
5504518PMC263848P2121152063079820630919Ratregion
5504706PMC58788P1113151736087017360983Ratregion
5504706PMC58788P1113151736087017360983Ratregion
5504706PMC58788P1113151808071518080828Ratregion
5504706PMC58788P1113151808071518080828Ratregion
5501512SHGC-57254151152836983428370971Ratregion
5505772UniSTS:492996304152403365924033963Ratregion
5506523BMP4_296914151961863619619550Ratregion
5501824MARC_14473-14474:1010604369:1473152502420125024674Ratregion
5502056MARC_26170-26171:1030649367:1457152837200128372459Ratregion
5502128MARC_5445-5446:996690391:184152844755128448793Ratregion
5502142MARC_5761-5762:996690803:2110151962106819622227Ratregion
10755492rs107545751152024860020248600Ratregion
152025250rs134560300152788577427885774Ratregion
Position Markers

Flank 1: (D15Mit2)
Rat AssemblyChrPosition (strand)Source
GRCr81516,911,521 - 16,911,648 (+)Marker Load Pipeline
mRatBN7.21514,481,165 - 14,481,294 (+)MAPPER
Rnor_6.01515,828,242 - 15,828,368NCBI
Rnor_5.01519,829,554 - 19,829,680UniSTS
RGSC_v3.41516,365,832 - 16,365,960RGD
RGSC_v3.41516,365,833 - 16,365,959UniSTS
Celera1514,471,849 - 14,471,971UniSTS
RGSC_v3.11516,365,684 - 16,366,009RGD
RH 3.4 Map15110.5UniSTS
RH 3.4 Map15110.5RGD
RH 2.0 Map1544.5RGD
Cytogenetic Map15p15-p14UniSTS
Flank 2: (Myh7)
Rat AssemblyChrPosition (strand)Source
GRCr81532,416,525 - 32,439,851 (-)NCBI
GRCr8 Ensembl1532,416,527 - 32,438,194 (-)Ensembl
mRatBN7.21528,446,550 - 28,469,888 (-)NCBI
mRatBN7.2 Ensembl1528,446,550 - 28,468,217 (-)Ensembl
UTH_Rnor_SHR_Utx1530,292,350 - 30,313,937 (-)NCBI
UTH_Rnor_SHRSP_BbbUtx_1.01531,439,549 - 31,461,136 (-)NCBI
UTH_Rnor_WKY_Bbb_1.01529,682,125 - 29,703,795 (-)NCBI
Rnor_6.01533,605,769 - 33,657,761 (-)NCBI
Rnor_6.0 Ensembl1533,634,422 - 33,656,089 (-)Ensembl
Rnor_5.01537,512,803 - 37,544,317 (-)NCBI
RGSC_v3.41533,072,928 - 33,094,595 (-)NCBI
Celera1528,024,223 - 28,045,877 (-)NCBI
Cytogenetic Map15p13NCBI


QTLs in Region (GRCr8)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
5684946Bss98Bone structure and strength QTL 983.90.0026tibia strength trait (VT:1000284)tibia ultimate force (CMO:0001734)15105825014481294Rat
1331729Rf42Renal function QTL 423.071kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)151736289773690657Rat
1641887Alcrsp14Alcohol response QTL 14response to alcohol trait (VT:0010489)brain neurotensin receptor 1 density (CMO:0002068)15142356671Rat
1582227Gluco30Glucose level QTL 303.60.0003blood glucose amount (VT:0000188)absolute change in blood glucose level area under curve (CMO:0002034)152803066582262678Rat
10755503Bp391Blood pressure QTL 3912.37arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)152024860037896129Rat
1582228Epfw3Epididymal fat weight QTL 34.10.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)152803066582262678Rat
1578646Bmd18Bone mineral density QTL 185.2femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)152280624098288169Rat
1578647Bmd17Bone mineral density QTL 174femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)152280624098288169Rat
9589149Insul29Insulin level QTL 299.060.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)15134723002Rat
10401805Kidm51Kidney mass QTL 51kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1530632945306329Rat
2317750Glom26Glomerulus QTL 264.3urine protein amount (VT:0005160)urine protein level (CMO:0000591)151249614165205939Rat
2298549Neuinf12Neuroinflammation QTL 123.5nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)15155302115Rat
2293688Bss29Bone structure and strength QTL 295.310.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)151111114256111142Rat
8552920Pigfal8Plasma insulin-like growth factor 1 level QTL 83blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)15134723002Rat
5685002Bss103Bone structure and strength QTL 1032.8tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)151448116528469888Rat
8694361Abfw6Abdominal fat weight QTL 610.20.001visceral adipose mass (VT:0010063)abdominal fat pad weight to body weight ratio (CMO:0000095)15134723002Rat
1582214Stl21Serum triglyceride level QTL 213.10.022blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)152803066582262678Rat
631273Lecl2Lens clarity QTL 20.001lens clarity trait (VT:0001304)age of onset/diagnosis of cataract (CMO:0001584)151059608955596089Rat
1641913Colcr2Colorectal carcinoma resistance QTL 26.570.0197intestine integrity trait (VT:0010554)poorly differentiated malignant colorectal tumor number (CMO:0002076)15226636822711984Rat
2300167Bmd63Bone mineral density QTL 635.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
731170Pur3Proteinuria QTL 32.30.0005urine protein amount (VT:0005160)urine protein excretion rate (CMO:0000759)15141686771Rat
738017Hcas7Hepatocarcinoma susceptibility QTL 72.91liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)15226636846921453Rat
152025253Hrtrt24Heart rate QTL 243.82heart pumping trait (VT:2000009)152788577486257085Rat
10054130Srcrt8Stress Responsive Cort QTL 82.180.0085blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)152211793367117933Rat
2300173Bmd62Bone mineral density QTL 6212.80.0001lumbar vertebra mineral mass (VT:0010511)volumetric bone mineral density (CMO:0001553)151111114256111142Rat
2324620Coatc3Coat color QTL 3coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)151985656646187442Rat
61424Scl1Serum cholesterol level QTL 17.70.001blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)151672552880672115Rat
1582251Gluco24Glucose level QTL 243.20.0008blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)15553075650530756Rat
1354657Despr13Despair related QTL 130.0022locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)15129912054Rat
631550Bw7Body weight QTL 73.6body mass (VT:0001259)body weight (CMO:0000012)151985656634924750Rat
1582242Gluco28Glucose level QTL 283.30.0008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)152803066582262678Rat
1582244Bw79Body weight QTL 7940.0002epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)152803066582262678Rat
1578660Bss19Bone structure and strength QTL 194.3femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)152280624098288169Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general number of animals used: 19 parental GK, 20 parental F344, 37 F1 and 206 F2 rats 5684953
qtl_general lineage: F1 animals from both the reciprocal crosses were used; 2 seperate F2 intercrosses were generated, one from grandmaternal GK and grandpaternal F344, the other from grandmaternal F344 and grandpaternal GK 5684953
qtl_general measurement method: at 215 days (mean age) rats kept under controlled conditions were sacrificed and left tibia subjected to three point bending test using Instron 4465 materials testing machine (Instron Inc., Canton, MA, USA) 5684953
qtl_general software used: properties of the bone were calculated from load displacement curves and collected using LABView data acquisition software 5684953
qtl_general this region (25-37 cM) is determined in grandmaternal F344 and grandpaternal GK F2 female rats 5684953