Pur30 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Pur30 (Proteinuria QTL 30) Rattus norvegicus

Symbol: Pur30
Name: Proteinuria QTL 30
RGD ID: 4889870
Trait: total urine protein amount   (VT:0000032)    
Measurement Type: urine total protein excretion rate   (CMO:0000756)    
LOD Score: 19.0
P Value: 0.005
Variance: Not Available
Inheritance Type: recessive
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2208,042,410 - 29,322,208RGD_MAPPER_PIPELINE
Rnor_6.0208,654,341 - 30,991,290RGD_MAPPER_PIPELINERnor6.0
Rnor_5.02010,844,023 - 32,781,021RGDRnor5.0
RGSC_v3.4208,286,533 - 28,734,502RGDRGSC3.4
Cross Type: Not Available
Strains Crossed: SBH/Ygl SBN/Ygl 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Candidate Gene Status
C2 is a candidate Gene for Pur30
Psmb8 is a candidate Gene for Pur30
Ubd is a candidate Gene for Pur30
Tubb5 is a candidate Gene for Pur30

Disease Annotations     Click to see Annotation Detail View
proteinuria  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
SBH/Ygl  (IEA)
SBN/Ygl  (IEA)

References

References - curated
1. Yagil Y, etal., Physiol Genomics. 2010 Nov 29;42A(4):301-16. Epub 2010 Sep 28.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1307113Zfand3zinc finger AN1-type containing 32086939898892572Rat
7551402LOC102548416transcription factor BTF3-like2087874428790421Rat
7709328LOC102548328tubulin alpha-1B chain-like2088600158864625Rat
1306975Btbd9BTB domain containing 92088992869253936Rat
7570468LOC102548069uncharacterized LOC1025480692092543369257033Rat
2702Glo1glyoxalase 12092735899291608Rat
619986Dnah8dynein, axonemal, heavy chain 82093013179560805Rat
9264061LOC10369439340S ribosomal protein S12 pseudogene2093821119382991Rat
6501785LOC100909773eukaryotic translation initiation factor 3 subunit I-like2094632669465146Rat
2703Glp1rglucagon-like peptide 1 receptor2095860759626228Rat
1566039Umodl1uromodulin-like 12096435099703091Rat
620294Abcg1ATP binding cassette subfamily G member 12097432699842735Rat
3847Tff3trefoil factor 32098508009855481Rat
620709Tff2trefoil factor 22098726699876008Rat
620707Tff1trefoil factor 12098921249895984Rat
1310135Tmprss3transmembrane serine protease 32099105229929705Rat
1310305Ubash3aubiquitin associated and SH3 domain containing, A2099411029986012Rat
1307712Rsph1radial spoke head component 120999869810020719Rat
1308587Slc37a1solute carrier family 37 member 1201002683910087691Rat
11442625LOC108349044uncharacterized LOC108349044201008819710091072Rat
621035Pde9aphosphodiesterase 9A201012362410216325Rat
9151994LOC103694394uncharacterized LOC103694394201023541910242744Rat
1585179Wdr4WD repeat domain 4201024057110264818Rat
621020Ndufv3NADH:ubiquinone oxidoreductase subunit V3201026582610275298Rat
1305003Pknox1PBX/knotted 1 homeobox 1201033160810358922Rat
2287Cbscystathionine beta synthase201036198710386663Rat
1584190U2af1U2 small nuclear RNA auxiliary factor 1201039665210407564Rat
2413Cryaacrystallin, alpha A201043844410442189Rat
9279284LOC103694395uncharacterized LOC103694395201049021910494046Rat
11458735LOC108349046uncharacterized LOC108349046201062325410624549Rat
7627849LOC102550542uncharacterized LOC102550542201066779710670802Rat
69407Sik1salt-inducible kinase 1201067074710680279Rat
11371075LOC108349047uncharacterized LOC108349047201068227210692160Rat
1565879Hsf2bpheat shock transcription factor 2 binding protein201075717210844177Rat
1305633Rrp1bribosomal RNA processing 1B201084423410869830Rat
1566085RGD1566085similar to pyridoxal (pyridoxine, vitamin B6) kinase201088395210912870Rat
621324Pdxkpyridoxal kinase201093065110952194Rat
2435Cstbcystatin B201096635710968399Rat
1307286Rrp1ribosomal RNA processing 1201098201610993260Rat
9333318LOC103694400uncharacterized LOC103694400201105901811085196Rat
11360274LOC108353238translation initiation factor IF-2-like201106029511061041Rat
1305787Agpat31-acylglycerol-3-phosphate O-acyltransferase 3201106058411144806Rat
7739283LOC102550992uncharacterized LOC102550992201106227311063950Rat
7602713LOC102550935uncharacterized LOC102550935201112467111127931Rat
1311263Trappc10trafficking protein particle complex subunit 10201116829811228634Rat
1582817Pwp2PWP2, small subunit processome component201122889211243204Rat
1303003Gatd3aglutamine amidotransferase class 1 domain containing 3A201124435311252450Rat
1562791Icoslginducible T-cell co-stimulator ligand201133000011340307Rat
1303239Dnmt3lDNA methyltransferase 3 like201134451311359090Rat
1311139Aireautoimmune regulator201136563011380636Rat
3311Pfklphosphofructokinase, liver type201139386011415889Rat
1309594Cfap410cilia and flagella associated protein 410201141742811424301Rat
1311889Trpm2transient receptor potential cation channel, subfamily M, member 2201143406211482880Rat
628861Lrrc3leucine rich repeat containing 3201148851411491354Rat
1563108Tspearthrombospondin-type laminin G domain and EAR repeats201150151011529210Rat
2318639LOC100365646hypothetical protein LOC100365646201153013411531125Rat
1586373LOC689927similar to keratin associated protein 10-10201153818611538998Rat
1597306LOC690386hypothetical protein LOC690386201154551311546046Rat
1561557RGD1561557similar to chromosome 21 open reading frame 29201155489911556312Rat
1596091LOC690415hypothetical protein LOC690415201156143811562589Rat
1596076LOC690431similar to keratin associated protein 10-7201157978811580868Rat
1593740LOC686720similar to keratin associated protein 10-10201158820011589033Rat
1583076LOC687631similar to keratin associated protein 10-10201159672011597693Rat
1596048LOC690460similar to keratin associated protein 10-7201160479011605588Rat
9255939LOC103694397keratin-associated protein 12-1-like201161234811613038Rat
2319746Krtap12-2keratin associated protein 12-2201162061611620945Rat
2319709LOC100361664keratin associated protein 12-1-like201162650311627475Rat
2319481LOC100361793keratin associated protein 12-1-like201163380511634137Rat
2319572LOC100361702keratin associated protein 12-1-like201163809211638689Rat
2319535LOC100361739keratin associated protein 12-1-like201164379411644167Rat
9307255LOC103694398keratin-associated protein 10-1-like201164978411650675Rat
1596032LOC690478similar to keratin associated protein 10-7201165596711656884Rat
1304860Ube2g2ubiquitin-conjugating enzyme E2G 2201170008911721823Rat
11515843LOC108349048small nuclear ribonucleoprotein G pseudogene201170429111707268Rat
1561022Sumo3small ubiquitin-like modifier 3201172648811737050Rat
1305983Pttg1ipPTTG1 interacting protein201174636911764097Rat
1305581Itgb2integrin subunit beta 2201177777311815647Rat
1311257Slx9SLX9 ribosome biogenesis factor201186314511896833Rat
1594734Nme2-ps1non-metastatic cells 2, protein (NM23B) expressed in, pseudogene 1201192842011929021Rat
2033Adarb1adenosine deaminase, RNA-specific, B1201197235212101022Rat
9123024LOC103694401uncharacterized LOC103694401201199021311992029Rat
1307334Pofut2protein O-fucosyltransferase 2201211781112128747Rat
7685928LOC102556115uncharacterized LOC102556115201213451212141020Rat
70936Col18a1collagen type XVIII alpha 1 chain201222520212332858Rat
3695Slc19a1solute carrier family 19 member 1201233467512354517Rat
6488401LOC100912209uncharacterized LOC100912209201235940612368482Rat
7600967LOC102546553uncharacterized LOC102546553201238015512395292Rat
7752662LOC102546627adenosylhomocysteinase-like201241959112422683Rat
1307430Pcbp3poly(rC) binding protein 3201242925512629985Rat
1565398Col6a1collagen type VI alpha 1 chain201265791312676370Rat
1305585Col6a2collagen type VI alpha 2 chain201277347212801179Rat
70915Ftcdformimidoyltransferase cyclodeaminase201280695712820466Rat
1562578Spatc1lspermatogenesis and centriole associated 1-like201282578912835007Rat
11477312LOC108349049uncharacterized LOC108349049201283514312835926Rat
620955Lsslanosterol synthase201284452212870474Rat
1306834Mcm3apminichromosome maintenance complex component 3 associated protein201287930412917069Rat
1308722YbeyybeY metalloendoribonuclease201291711112926587Rat
1564149RGD1564149similar to Protein C21orf58201292731012938891Rat
1595865Pcntpericentrin201294352313038615Rat
1582897Dip2adisco-interacting protein 2 homolog A201304405613127971Rat
3615S100bS100 calcium binding protein B201313063313142856Rat
1565519Prmt2protein arginine methyltransferase 2201315451313212613Rat
2325469Mir678microRNA 678201321242813212510Rat
9245373LOC103694402uncharacterized LOC103694402201321278813216972Rat
1306923Slc5a4solute carrier family 5 member 4201341503913458110Rat
1309867Slc5a4bsolute carrier family 5 (neutral amino acid transporters, system A), member 4b201349892613547945Rat
1565460Zfp280bzinc finger protein 280B201356638113581215Rat
9200139LOC10369033160S ribosomal protein L13 pseudogene201358791013589372Rat
1563815RGD1563815similar to sodium-glucose cotransporter-like 1201360364413653006Rat
7583376LOC102552984uncharacterized LOC102552984201365461213656598Rat
1306807Vpreb3V-set pre-B cell surrogate light chain 3201365668313661542Rat
1564162RGD1564162similar to Homo sapiens fetal lung specific expression unknown201366160313665073Rat
1359417Chchd10coiled-coil-helix-coiled-coil-helix domain containing 10201366504613666845Rat
3099Mmp11matrix metallopeptidase 11201367005113678834Rat
1308761Smarcb1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1201367995513702821Rat
1597373Derl3derlin 3201369210213707645Rat
621163Mifmacrophage migration inhibitory factor201371521913732980Rat
9072264LOC103690388uncharacterized LOC103690388201373929613743666Rat
69362Gstt2glutathione S-transferase, theta 2201376081013764481Rat
11419125LOC10835342440S ribosomal protein S28 pseudogene201376675113767096Rat
1591294Gstt4glutathione S-transferase, theta 4201377818513784813Rat
2765Gstt1glutathione S-transferase theta 1201379910213816527Rat
1562732Gstt3glutathione S-transferase, theta 3201381779513825475Rat
61923DdtD-dopachrome tautomerase201382715313829624Rat
620263Cabin1calcineurin binding protein 1201383603213963003Rat
7615076LOC102556116uncharacterized LOC102556116201393780113941158Rat
1308595Susd2sushi domain containing 2201396509813972547Rat
2684Ggt5gamma-glutamyltransferase 5201398844414001296Rat
2683Ggt1gamma-glutamyltransferase 1201401972314045781Rat
2318441Lrrc75bleucine rich repeat containing 75B201405046514056670Rat
1597573Snrpd3small nuclear ribonucleoprotein D3 polypeptide201408056214095644Rat
1597571Gucd1guanylyl cyclase domain containing 1201409603014102901Rat
7489019Mir327microRNA 327201411064714110740Rat
7579095LOC102556392uncharacterized LOC102556392201413988814159024Rat
7549651LOC102556333uncharacterized LOC102556333201416422514172828Rat
620091Upb1beta-ureidopropionase 1201416738314193724Rat
2049Adora2aadenosine A2a receptor201426525114282873Rat
1309570Specc1lsperm antigen with calponin homology and coiled-coil domains 1-like201428747014393879Rat
11408720LOC108349050ATP synthase subunit f, mitochondrial pseudogene201431484014318516Rat
1307993BcrBCR activator of RhoGEF and GTPase201442125014546406Rat
1596098Rab36RAB36, member RAS oncogene family201455748514573939Rat
1305601Rsph14radial spoke head 14 homolog201457698314653236Rat
2717GnazG protein subunit alpha z201459307214644020Rat
1561987RGD1561987similar to 60S ribosomal protein L9201470090314701718Rat
1590986Polr3d-ps1polymerase (RNA) III (DNA directed) polypeptide D, pseudogene 1201481203914814130Rat
11485860LOC108353250uncharacterized LOC108353250201488717414912510Rat
1590969Pcdh15protocadherin related 15201495221315334745Rat
9287849LOC103694424protocadherin-15-like201496361114967308Rat
11442616LOC108349009uncharacterized LOC108349009201664151416660446Rat
628671ZwintZW10 interacting kinetochore protein201707578117091715Rat
11451238LOC108349051uncharacterized LOC108349051201709058217116596Rat
7722596LOC102547421uncharacterized LOC102547421201770853117717582Rat
1559903RGD1559903similar to RIKEN cDNA 1700049L16201775074417751541Rat
2321795LOC100364062M2 pyruvate kinase-like201804541818047255Rat
2324120LOC100362738M2 pyruvate kinase-like201805822118060409Rat
2322906LOC100360039Mitochondrial fission regulator 1-like201809635718108954Rat
1589811LOC690972similar to NAD(P)H dehydrogenase, quinone 2201815675518157832Rat
11465285LOC108349052uncharacterized LOC108349052201824940818257732Rat
7681303LOC102547483uncharacterized LOC102547483201828725118302197Rat
1560350RGD1560350similar to proteasome subunit iota201831006818311016Rat
9108964LOC103694428single-stranded DNA-binding protein, mitochondrial pseudogene201834313418347771Rat
7587909LOC102547881uncharacterized LOC102547881201840620318411290Rat
620954Ipmkinositol polyphosphate multikinase201845730918489884Rat
9200697LOC10369440460S ribosomal protein L39201849210118492465Rat
1309529Cisd1CDGSH iron sulfur domain 1201849353818506923Rat
11466901LOC108349023MICOS complex subunit Mic10 pseudogene201851557518516310Rat
2323319LOC100359822hypothetical LOC100359822201851596618516286Rat
1307886Ube2d1ubiquitin-conjugating enzyme E2D 1201854737018580291Rat
620682Tfamtranscription factor A, mitochondrial201859405718606106Rat
7572815LOC102548205uncharacterized LOC102548205201864306918646500Rat
1307459Bicc1BicC family RNA binding protein 1201878060518940429Rat
7674886LOC102548329uncharacterized LOC102548329201897406518989449Rat
9123577LOC103694405uncharacterized LOC103694405201899363818996435Rat
11481117LOC10834905340S ribosomal protein S19 pseudogene201918220019189894Rat
7516411LOC102548544uncharacterized LOC102548544201920958319317898Rat
1307967Phyhiplphytanoyl-CoA 2-hydroxylase interacting protein-like201931809019359063Rat
1310149Fam13cfamily with sequence similarity 13, member C201935886919470212Rat
9450988LOC103694406uncharacterized LOC103694406201944055119470242Rat
7602974LOC102549211uncharacterized LOC102549211201959094019592754Rat
7730177LOC102552716uncharacterized LOC102552716201960047019616884Rat
1596295Slc16a9solute carrier family 16, member 9201963428019675358Rat
7646506LOC102553246uncharacterized LOC102553246201969613319702929Rat
6490783Mrlnmyoregulin201970362819720596Rat
1587433Ccdc6coiled-coil domain containing 6201972900519825219Rat
11520367LOC10834905440S ribosomal protein S26-like201976331419766005Rat
7558952LOC102553507uncharacterized LOC102553507201987799119894314Rat
620157Ank3ankyrin 3201994876720480628Rat
7587934LOC10255422340S ribosomal protein S2-like202013735520139593Rat
9383020LOC103694407uncharacterized LOC103694407202017107920175474Rat
7560662LOC102554153uncharacterized LOC102554153202021638720223112Rat
11381229LOC108353248uncharacterized LOC108353248202022876920242443Rat
7751295LOC102554005uncharacterized LOC102554005202036818220372674Rat
7579079LOC102553944uncharacterized LOC102553944202037634520378761Rat
2318104LOC100362484suppression of tumorigenicity 13-like202050500620506734Rat
6488040LOC100912256hsc70-interacting protein-like202050940920510316Rat
1564702RGD1564702similar to RIKEN cDNA 0610012D17202051928620520811Rat
1586296Rpl29-ps2ribosomal protein L29, pseudogene 2202055100520551584Rat
2319Cdk1cyclin-dependent kinase 1202057634120591510Rat
7631568LOC102554932uncharacterized LOC102554932202062675220631001Rat
1306871Rhobtb1Rho-related BTB domain containing 1202063857920715437Rat
7587935LOC102555174uncharacterized LOC102555174202086561920870694Rat
7524995LOC102555750uncharacterized LOC102555750202103638621044143Rat
7519461LOC102555815uncharacterized LOC102555815202110613821128279Rat
7573196LOC102546939alpha-enolase-like202116465721166371Rat
7576062LOC102546320uncharacterized LOC102546320202118993521196698Rat
7679422LOC102546397uncharacterized LOC102546397202119716921241593Rat
1564320RGD1564320similar to 60S ribosomal protein L5202125642421266574Rat
1306739Cabcoco1ciliary associated calcium binding coiled-coil 1202131677021426036Rat
7689460LOC102546554uncharacterized LOC102546554202148950321498469Rat
7745235LOC102546480uncharacterized LOC102546480202149123521493071Rat
7644569LOC102546774uncharacterized LOC102546774202156042021563766Rat
7536850LOC102547156uncharacterized LOC102547156202156569321597750Rat
1309273Tmem26transmembrane protein 26202164065521689655Rat
1311735Arid5bAT-rich interaction domain 5B202171390021881193Rat
9376404LOC103694408uncharacterized LOC103694408202185798621860429Rat
11401889LOC108349057uncharacterized LOC108349057202189614521903646Rat
7736416LOC102550601uncharacterized LOC102550601202190378321907298Rat
1304834Rtkn2rhotekin 2202191948622004279Rat
1565986Zfp365zinc finger protein 365202206016022083766Rat
7525773LOC102550893uncharacterized LOC102550893202220193422208232Rat
7628198LOC102550965uncharacterized LOC102550965202226131622264195Rat
11381173LOC108349058uncharacterized LOC108349058202228669722309649Rat
11425208LOC108349059uncharacterized LOC108349059202237891822394992Rat
1308233Ado2-aminoethanethiol dioxygenase202244799622449176Rat
621608Egr2early growth response 2202245217022461018Rat
11356502LOC108349024uncharacterized LOC108349024202248985122492021Rat
61937Nrbf2nuclear receptor binding factor 2202272814522746477Rat
708458Jmjd1cjumonji domain containing 1C202275174322914080Rat
1560401Reep3receptor accessory protein 3202288705322998985Rat
7707478LOC102551701uncharacterized LOC102551701202307982223087869Rat
1559781RGD1559781similar to Dynein, axonemal, light chain 4202314684223148234Rat
1585090LOC691326similar to laminin receptor 1 (ribosomal protein SA)202324800323248940Rat
9159709LOC103694409uncharacterized LOC103694409202333700023337374Rat
7535666LOC102552132uncharacterized LOC102552132202334613523359680Rat
1566373RGD1566373similar to large subunit ribosomal protein L36a202346683023467204Rat
1595813LOC365559similar to mannose-6-phosphate receptor binding protein 1202356549923566804Rat
6500332Rps27a-ps25ribosomal protein S27a, pseudogene 25202371634123716733Rat
2323967LOC100362811hypothetical LOC100362811202375764023759381Rat
11400008LOC108349060uncharacterized LOC108349060202387832123906459Rat
7510380LOC102552513uncharacterized LOC102552513202393089723940687Rat
7597607LOC102552652uncharacterized LOC102552652202444595124446824Rat
2319794LOC100365076hypothetical LOC100365076202457494524577118Rat
7692665LOC102552717uncharacterized LOC102552717202475499924832798Rat
11518829LOC108353251endogenous retrovirus group K member 7 Pro protein-like202492398724925079Rat
9436693LOC103694410uncharacterized LOC103694410202506312425114088Rat
1562230Ctnna3catenin alpha 3202506312426640428Rat
9215258LOC103690413catenin alpha-3202512053525249199Rat
9451665LOC103694429catenin alpha-3-like202545387925656182Rat
9089399LOC103694411ubiquitin-conjugating enzyme E2 S-like202562189725622647Rat
9376417LOC103694412catenin alpha-3-like202581653925916341Rat
1304866Lrrtm3leucine rich repeat transmembrane neuronal 3202599030426163656Rat
9319821LOC103694430catenin alpha-3-like202623833926290654Rat
9155762LOC103694413eukaryotic translation initiation factor 3 subunit G pseudogene202637108326375443Rat
6501150LOC100909853heat shock cognate 71 kDa protein-like202652956226531558Rat
11454336LOC108349010protein kish-B202653443426537164Rat
9304241LOC103694431ubiquitin-conjugating enzyme E2 variant 2 pseudogene202660495926606021Rat
11369221Trnas-uga4transfer RNA serine (anticodon UGA) 4202667800426678085Rat
9080142LOC10369441428S ribosomal protein S36, mitochondrial pseudogene202673895326740478Rat
1310971Herc4HECT and RLD domain containing E3 ubiquitin protein ligase 4202675594826831267Rat
1308542Sirt1sirtuin 1202683197126851587Rat
1591898Dnajc12DnaJ heat shock protein family (Hsp40) member C12202689313926913041Rat
1308510Mypnmyopalladin202698882027074106Rat
9272284LOC103694425U1 small nuclear ribonucleoprotein C pseudogene202703033427031841Rat
1304957Atoh7atonal bHLH transcription factor 7202708296127083410Rat
2323787LOC100362906hypothetical LOC100362906202708344127089908Rat
621263Pbld1phenazine biosynthesis-like protein domain containing 1202710330027118650Rat
2321665Pbld2phenazine biosynthesis-like protein domain containing 2202712095127155348Rat
1306162Taf9-psTAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor pseudogene202712929627130210Rat
1310019Hnrnph3heterogeneous nuclear ribonucleoprotein H3202716792627178172Rat
1592188Rufy2RUN and FYVE domain containing 2202721972927250006Rat
9327280LOC103694415uncharacterized LOC103694415202725832327259708Rat
1311311Slc25a16solute carrier family 25 member 16202728338327308069Rat
9165343LOC103694416transcription elongation factor B polypeptide 1 pseudogene202735216727352667Rat
1310993Tet1tet methylcytosine dioxygenase 1202735912227438039Rat
6495981LOC100910945uncharacterized LOC100910945202736260627380815Rat
11461137LOC108353231uncharacterized LOC108353231202746068827463657Rat
631337Rwdd1RWD domain containing 1202753436127552225Rat
7738480LOC102548545uncharacterized LOC102548545202755236527575684Rat
1595701Calhm4calcium homeostasis modulator family member 4202757380927578269Rat
2318506Trappc3ltrafficking protein particle complex subunit 3L202757826827664689Rat
1310405Calhm5calcium homeostasis modulator family member 5202765181727673817Rat
1304835Calhm6calcium homeostasis modulator family member 6202768113827683580Rat
1305079Dsedermatan sulfate epimerase202770373827784982Rat
1595702LOC499444similar to eukaryotic translation elongation factor 1 alpha 2202780710127808615Rat
1305732Gcc2GRIP and coiled-coil domain containing 2202783296027879764Rat
1560732Lims1LIM zinc finger domain containing 1202789598128004767Rat
1560047Ranbp2RAN binding protein 2202802705428076664Rat
1566050Ccdc138coiled-coil domain containing 138202807678428158053Rat
1561714Edarectodysplasin-A receptor202817913228263092Rat
7629997LOC10254976260S ribosomal protein L21-like202823514328259912Rat
9440676LOC103694417uncharacterized LOC103694417202827465128276632Rat
7719558LOC10254986640S ribosomal protein S6-like202828679528349628Rat
1589772Sh3rf3SH3 domain containing ring finger 3202835567128720020Rat
1560047Ranbp2RAN binding protein 2202836553828375676Rat
7702166LOC102549125leucine-rich repeat-containing protein 57-like202860960628613651Rat
1359307Septin10septin 10202872247928814841Rat
9258231LOC103694418uncharacterized LOC103694418202875956228760867Rat
1595666Sowahcsosondowah ankyrin repeat domain family member C202881503928819505Rat
1305065Snrpd2lsmall nuclear ribonucleoprotein D2-like202887290228873434Rat
621000P4ha1prolyl 4-hydroxylase subunit alpha 1202892061628972576Rat
1588484Pla2g12bphospholipase A2, group XIIB202898944029007967Rat
735082Oit3oncoprotein induced transcript 3202900933029029905Rat
1589771Mcumitochondrial calcium uniporter202903745229199224Rat
1595645LOC503340similar to Fatty acid-binding protein, epidermal (E-FABP) (Cutaneous fatty acid-binding protein) (C-FABP) (DA11)202927978329280401Rat
735033Micu1mitochondrial calcium uptake 1202928483329433617Rat
1359677Dnajb12DnaJ heat shock protein family (Hsp40) member B12202944551029463739Rat
621731Ddit4DNA-damage-inducible transcript 4202950928329511382Rat
2321124Anapc16anaphase promoting complex subunit 16202954462629558928Rat
1359255Ascc1activating signal cointegrator 1 complex subunit 1202955833029648899Rat
9199911LOC103694426cytochrome c oxidase subunit 5B, mitochondrial pseudogene202957746929577874Rat
1308568Spock2SPARC/osteonectin, cwcv and kazal like domains proteoglycan 2202965492629679927Rat
11409431LOC10834906340S ribosomal protein S29 pseudogene202969527129695979Rat
620355Chst3carbohydrate sulfotransferase 3202973182829768656Rat
2324829LOC100363060ribosomal protein L37a-like202978656229787623Rat
3423Psapprosaposin202983130229856876Rat
619760Cdh23cadherin-related 23202985701830263758Rat
1590938VsirV-set immunoregulatory receptor202989754329923381Rat
2320942LOC100361018rCG22048-like202994742729954869Rat
727811Slc29a3solute carrier family 29 member 3203028952730327343Rat
621756Unc5bunc-5 netrin receptor B203033968030406593Rat
1595812LOC365569similar to 40S ribosomal protein S7 (S8)203047235030475271Rat
7722068LOC102555625uncharacterized LOC102555625203053917130554950Rat
9315662LOC10369441960S ribosomal protein L39 pseudogene203061611730616323Rat
7743730LOC102555785uncharacterized LOC102555785203065679330661990Rat
3263Pcbd1pterin-4 alpha-carbinolamine dehydratase 1203068969030696465Rat
628599Sgpl1sphingosine-1-phosphate lyase 1203069993630769178Rat
1561665Tbatathymus, brain and testes associated203078623930804354Rat
11421478LOC108349065uncharacterized LOC108349065203079170230798644Rat
1308899Adamts14ADAM metallopeptidase with thrombospondin type 1 motif, 14203081231930888936Rat
708463Prf1perforin 1203091529430920804Rat
1305933Pald1phosphatase domain containing, paladin 1203093890130983907Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10654D20Wox72692096246409624908Ratregion
34260D20Mgh51182096556429655747Ratregion
33563D20Mit5247201873921018739456Ratregion
36382D20Mgh7146201151805911518204Ratregion
37336D20Rat35184202120327621203459Ratregion
37582D20Rat36150202821819328218342Ratregion
35182D20Rat6127202963014229630177Ratregion
35182D20Rat6127202963005129630177Ratregion
35212D20Rat13137202549965025499765Ratregion
35477D20Rat4168201248227712482444Ratregion
36832D20Rat15190202080792220808094Ratregion
37632D20Rat491282086543418654464Ratregion
37652D20Rat26150202897967928979818Ratregion
37764D20Rat30135202188915521889297Ratregion
37872D20Rat31225201080030810800530Ratregion
37888D20Rat34137202796807727968216Ratregion
36733D20Rat7135202644782026447954Ratregion
34817D20Rat8146202980555329805712Ratregion
34872D20Rat3138201231715412317307Ratregion
34908D20Rat21482098998179899946Ratregion
35657D20Rat5124201887215018872273Ratregion
38180D20Rat27190203091348130913670Ratregion
38436D20Rat33200201450217214502370Ratregion
39998D20Rat64200203099108530991290Ratregion
40318D20Rat60158201505041015050565Ratregion
40336D20Rat61175202107813621078310Ratregion
38910D20Rat23149202171784821717996Ratregion
38910D20Rat23149202156941921569567Ratregion
39290D20Rat28210202258425822584465Ratregion
39336D20Rat78220202932795029328157Ratregion
39396D20Rat63235203065363030653865Ratregion
39522D20Rat59105201141897811419082Ratregion
41662D20Rat69215202210215322102362Ratregion
41716D20Rat68220202513076825130996Ratregion
43144D20Rat67233201137996811380199Ratregion
43145D20Rat75200201736123017361441Ratregion
45672D20Got62432096149839615225Ratregion
45673D20Rat74219201080030810800522Ratregion
45674D20Got9215201199318411993391Ratregion
45674D20Got9215201199279211993391Ratregion
45675D20Got10181201137971611379896Ratregion
45676D20Got13183201441145914411641Ratregion
45677D20Got12258201372550313725760Ratregion
45678D20Got15264201506361615063874Ratregion
45679D20Got14226201499103514991260Ratregion
45680D20Got7208201698269016982897Ratregion
45681D20Got19288201789101717891301Ratregion
45682D20Got11133201846451518464647Ratregion
45683D20Got23185201950204019502224Ratregion
45684D20Got25197201971400819714204Ratregion
45685D20Got20107201923642619236532Ratregion
45686D20Got27200202042141720421616Ratregion
45688D20Got28135202096295020963084Ratregion
60267D20Got21115202315932323159439Ratregion
60268D20Got22247202231160122311847Ratregion
60269D20Got24248202104309921043331Ratregion
60271D20Got29232202966626129666492Ratregion
60264D20Got16126202305202223052142Ratregion
60265D20Got17178202235661722356794Ratregion
60266D20Got18222202211622722116443Ratregion
625787D20Got5098202214921522149312Ratregion
66649D20Mco1145201361549313615636Ratregion
67748D20Uwm2195202070784220708052Ratregion
1576380D20Ztm3300201166909911669398Ratregion
1630813D20Got112282201826795618268238Ratregion
1630863D20Wox22166201464766414647829Ratregion
1631979D20Got117195202744832327448517Ratregion
1632408D20Wox21237201376019813760434Ratregion
1628749D20Got118151202271985222719999Ratregion
1628805D20Got122106201274986812749973Ratregion
1629026D20Wox1996203069802630698121Ratregion
1629946D20Wox6145201313180113131945Ratregion
1630026D20Got8213201789101717891229Ratregion
1638852D20Got106205202619240526192609Ratregion
1641423D20Wox14347201993657219936918Ratregion
1632896D20Got116127202207267022072796Ratregion
1632913D20Got110122202646088326461002Ratregion
1633063D20Uwm4198201302648913026686Ratregion
1633567D20Got111140203091896630919105Ratregion
1640594D20Got127126202638242826382553Ratregion
1635391D20Mco2198202248134422481541Ratregion
1636386D20Uwm30201911993919120075Ratregion
1636692D20Got123150202799666527996814Ratregion
1637000D20Got113130202786437727864506Ratregion
1637320D20Got108224203018184130182064Ratregion
1637794D20Got115247202630564226305883Ratregion
1633902D20Wox9223201403892314039145Ratregion
1634057D20Got120218202557679325577010Ratregion
1634686D20Got107164202335343223353595Ratregion
7205992UniSTS:531308139201265809412658999Ratregion
7206296Gtf2h565201016931710169420Ratregion
5038638BE553943122201468655714686678Ratregion
5038804RH127342220202299844022998659Ratregion
5036081Ank3174202042429020425946Ratregion
5038930RH127414189201935895119359139Ratregion
5036318Glp1r1972096246129624808Ratregion
5039310RH127633200201707605717076256Ratregion
5036585AU048514260203057901030579269Ratregion
5036623AU048630285202216387122164154Ratregion
5036729AU049018252202080785420808105Ratregion
5033915RH140601188202683281426833001Ratregion
5028623RH118335178202010465920104836Ratregion
5028635RH125661250202968139029681639Ratregion
5031452AU048277105202582599625826100Ratregion
5031452AU048277105202582599625826074Ratregion
5031550AU0479602592086729128673170Ratregion
5034285RH142064216202900851229008713Ratregion
5026358RH131898180202721739027217569Ratregion
5026358RH131898180202717787827178057Ratregion
5026432RH132188207202950950629509712Ratregion
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5029267RH144147152201365670513656856Ratregion
5034758AA892174102202048090620481007Ratregion
5026800RH133580217202073010620730322Ratregion
5026850RH133771220203028395930284178Ratregion
5026870RH133843186201382367713824643Ratregion
5032295AW061257117201114390111144017Ratregion
5035046Unc5h20203034972830349751Ratregion
5035106AFM324zg90202846312728463327Ratregion
5026986RH134291209202752660127526809Ratregion
5032391AV064928119202903748029037598Ratregion
5032459RH126560172202743733727437508Ratregion
5032637RH134743205202954488229545086Ratregion
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5032741RH135130197201086404110864237Ratregion
5032923RH136979180202965192029652099Ratregion
5024988AU022012222202181366321813886Ratregion
5025074AW553563102202683058426830685Ratregion
5025076AW742733256201166078911661044Ratregion
5027751RH9459890201141572611415815Ratregion
5030509BF403456160201840845818408617Ratregion
5033243RH138113160202506463025064789Ratregion
5030685BF398822182201292306712923248Ratregion
5033449RH138875155202028426520284419Ratregion
5028073U32469192201233503912335230Ratregion
5028085X06746191202245476922454959Ratregion
5030777AW535227193201383028013830472Ratregion
5030823BE1204191832092692299269411Ratregion
5025618RH129013190201970367019703859Ratregion
5025744RH129493191201267614912676339Ratregion
5028368D10Jhu60271201218316412183434Ratregion
5025790RH129672199201233264212332840Ratregion
5025918RH1301992012092728069273006Ratregion
5028511AI173445146202063863220638777Ratregion
5031049BE115058157201279899312799149Ratregion
5051871RH94706180201313107913131258Ratregion
5053455RH142659125202951824029518364Ratregion
5055839RH144032111202616411326164223Ratregion
5055963RH144104176201494673814946913Ratregion
5056265RH144278184201521479015214973Ratregion
5056485RH144406233202163859021638822Ratregion
5051585AW5506431382092729939273130Ratregion
5051721RH9461997201044203310442129Ratregion
5053783RH142848146202174771921747864Ratregion
5053783RH142848146202159923521599380Ratregion
5056583RH144462137201459319014593326Ratregion
5051997RH947802322096248949625126Ratregion
5052157RH94872100202059134320591442Ratregion
5054517RH143270132201893942318939554Ratregion
5059412AW530645183201291725812917440Ratregion
5054955RH143522128201110580011105927Ratregion
5057910BI283857150201174684511746994Ratregion
5058634BE102216179201448841614488594Ratregion
5058638BE102222181201850747818507658Ratregion
5058808BE102483175201990842319908597Ratregion
5058066BF386530183201727345717273639Ratregion
5052537AB01003185202314794423148028Ratregion
5058950BF387291167201162184911622015Ratregion
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5059004BF387311159201310385313104011Ratregion
5059856BE103415169202043233620432504Ratregion
5059966BF388249168201209763812097805Ratregion
5052285MDB0447102201210083512100936Ratregion
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5050250RH133948216202067821820678432Ratregion
5050318RH133987220202048021020480429Ratregion
5050390RH134029192201099306610993257Ratregion
5053271RH142552281201661695216617232Ratregion
5059238BI278745131201074479710744927Ratregion
5059306BG377178215202156345521563669Ratregion
7192158Gabrb1438201123238111232818Ratregion
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5053595RH142739151202295610422956254Ratregion
5050088RH1338551852092738889274072Ratregion
5052869RH142321157201382936913829525Ratregion
5051176RH134483197202356692323567119Ratregion
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5053127RH142469107201183353311833639Ratregion
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5051489AI85355686202707399127074076Ratregion
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5044012RH130359186202683088526831070Ratregion
5044126RH130425203201141560311415805Ratregion
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5044692RH130749186201381632013816505Ratregion
5044824RH130824197201114394611144142Ratregion
5046316RH131682181201441882314419003Ratregion
5046334RH131693183202245129922451481Ratregion
5046378RH131718201202991975629919956Ratregion
5046450RH131759192202707377527073966Ratregion
5046148RH131586202202037223620372630Ratregion
5048900RH133171211203028961730289827Ratregion
5048910RH133176203201963620419637114Ratregion
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5046678RH131892183201972916819729350Ratregion
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5047114RH132141191202037640120376591Ratregion
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5081567BE1174011982092468539247050Ratregion
5085187Trpm2-predicted159201145879411459756Ratregion
5085555BM390539160202653482926534988Ratregion
5502649RH1262880201095183310952278Ratregion
5502649RH1262880201088948810889941Ratregion
5503956Ranbp21467202805517728056643Ratregion
5504125UniSTS:259034246201207405312075254Ratregion
5504129UniSTS:2590351122201112999411131115Ratregion
5504137ORF661487201291757712919063Ratregion
5504143UniSTS:2591684722096931789693649Ratregion
5504133UniSTS:2590800201280914812810147Ratregion
5504185UniSTS:259631287201149005411490340Ratregion
5504192UniSTS:259664489201122648311226971Ratregion
5504194Rsph1641201000718510007825Ratregion
5504957Pla2g12b494202900743129007924Ratregion
5506849G46449121202871276028712880Ratregion
5507243AW539211922088921578892248Ratregion
5500045UniSTS:236356194202946279429462987Ratregion
5500941MARC_9679-9680:996688523:1241201370434313705122Ratregion
5500412GDB:5550190202780858527808806Ratregion
5500302D20S108075202275208622752160Ratregion
5502481RH1250590201429474814295811Ratregion
5502729BCR88201454510414545191Ratregion
5500585RH136086192202807483928075542Ratregion
5504181UniSTS:259595231201043858710440172Ratregion
5501566D7S5121185203037004530371229Ratregion
5501954MARC_20758-20759:1025103834:10201021023110211076Ratregion
5505618UniSTS:4856020202586222725862285Ratregion
5501780MARC_12153-12154:1004708400:3135202967315329673857Ratregion
5502307RH124339154202735234827352501Ratregion
5502325RH124528249202683354626833794Ratregion
Position Markers

Flank 1: (D20Rat49)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2208,042,410 - 8,042,534 (+)MAPPER
Rnor_6.0208,654,341 - 8,654,464NCBI
Rnor_5.02010,844,023 - 10,844,146UniSTS
RGSC_v3.4208,286,534 - 8,286,657UniSTS
RGSC_v3.4208,286,533 - 8,286,657RGD
RGSC_v3.1208,286,761 - 8,286,884RGD
Celera209,573,432 - 9,573,555UniSTS
RH 3.4 Map20105.9RGD
RH 3.4 Map20105.9UniSTS
RH 2.0 Map20112.8RGD
SHRSP x BN Map206.84RGD
Peak: (D20Rat67)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22010,650,396 - 10,650,628 (+)MAPPER
Rnor_6.02011,379,968 - 11,380,199NCBI
Rnor_5.02013,549,818 - 13,550,049UniSTS
RGSC_v3.42010,995,439 - 10,995,670UniSTS
RGSC_v3.42010,995,438 - 10,995,671RGD
RGSC_v3.12010,995,412 - 10,995,904RGD
Celera2012,156,219 - 12,156,431UniSTS
RH 3.4 Map20150.8RGD
RH 3.4 Map20150.8UniSTS
RH 2.0 Map20154.8RGD
SHRSP x BN Map2011.54RGD
Cytogenetic Map20p12UniSTS
Flank 2: (D20Rat64)
Rat AssemblyChrPosition (strand)Source
mRatBN7.22029,322,002 - 29,322,208 (+)MAPPER
Rnor_6.02030,991,085 - 30,991,290NCBI
Rnor_5.02032,780,816 - 32,781,021UniSTS
RGSC_v3.42028,734,296 - 28,734,502RGD
RGSC_v3.42028,734,297 - 28,734,502UniSTS
RGSC_v3.12028,748,063 - 28,748,459RGD
Celera2030,755,261 - 30,755,466UniSTS
FHH x ACI Map2014.6298UniSTS
FHH x ACI Map2014.6298RGD
Cytogenetic Map20q11UniSTS


QTLs in Region (Rnor_6.0)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354642Despr15Despair related QTL 150.0027locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)20124652101Rat
1600382Edcs3Endometrial carcinoma susceptibility QTL33.50.003uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)20125653396Rat
1641893Alcrsp7Alcohol response QTL 7response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)20126305996Rat
2317851Alcrsp22Alcohol response QTL 223.20.05response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)20126305996Rat
7387283Uae44Urinary albumin excretion QTL 440.1712urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)20127357423Rat
9590275Scort15Serum corticosterone level QTL 153.480.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)20128375393Rat
9589155Insul32Insulin level QTL 326.380.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)20128375393Rat
9590109Sffal8Serum free fatty acids level QTL 85.320.01blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)20128375393Rat
7411650Foco23Food consumption QTL 2320.70.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)20128375393Rat
8694189Bw153Body weight QTL 1533.130.001body mass (VT:0001259)body weight gain (CMO:0000420)20128375393Rat
6893685Bw111Body weight QTL 1112.70.004body mass (VT:0001259)body weight (CMO:0000012)20133300419Rat
9590252Scort12Serum corticosterone level QTL 1220.460.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)20137550487Rat
7411668Foco32Food consumption QTL 3280.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)20137550487Rat
2305926Iddm37Insulin dependent diabetes mellitus QTL 376blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)20201865447018654Rat
1641915Colcr9Colorectal carcinoma resistance QTL 92.970.0024intestine integrity trait (VT:0010554)benign colorectal tumor number (CMO:0001795)20299970747999707Rat
2317057Aia27Adjuvant induced arthritis QTL 272.83joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)20340211127968216Rat
1558640Prcs2Prostate cancer susceptibility QTL 23.3prostate integrity trait (VT:0010571)percentage of study population developing ventral prostate tumorous lesions during a period of time (CMO:0000943)20403911318872273Rat
4889857Pur27Proteinuria QTL 2712.20.001total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)20403911318872273Rat
1598816Memor12Memory QTL 122.4exploratory behavior trait (VT:0010471)average horizontal distance in proximity to the target during voluntary locomotion in an experimental apparatus (CMO:0002674)20410895649108956Rat
1300152Bp195Blood pressure QTL 1953.46arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2048554689899946Rat
1331772Cdexp2CD45RC expression in CD8 T cells QTL 25.7CD8-positive T cell quantity (VT:0008077)blood CD45RChigh CD8 T cell count to CD45RClow CD8 T cell count ratio (CMO:0001990)20485546810800530Rat
61432Cia1Collagen induced arthritis QTL 1joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)20485547515050565Rat
70154Insul2Insulin level QTL 23.75blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)20587544818739210Rat
1581577Pur15Proteinuria QTL 154.380.0002total urine protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)20865434118872273Rat
4889870Pur30Proteinuria QTL 30190.005total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)20865434130991290Rat
631265Iresp1Immunoglobin response QTL18.3blood anti-double stranded DNA antibody amount (VT:0004762)serum anti-DNA antibody level (CMO:0001533)20965564214411641Rat
9590092Insglur9Insulin/glucose ratio QTL 918.380.001blood insulin amount (VT:0001560)calculated plasma insulin level (CMO:0002170)201383430956205956Rat
7411652Foco24Food consumption QTL 240.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)201383430956205956Rat
2317880Alcrsp25Alcohol response QTL 252.3response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)201782709656205956Rat
4889610Pancm3Pancreatic morphology QTL 33.750.001pancreas mass (VT:0010144)pancreas wet weight (CMO:0000626)201887215049108956Rat
2303626Vencon10Ventilatory control QTL 100.001respiration trait (VT:0001943)respiration rate (CMO:0000289)202085847056205956Rat
2303578Gluco50Glucose level QTL 502blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)202660884356205956Rat
2303587Bw93Body weight QTL 9313body mass (VT:0001259)body weight (CMO:0000012)202660884356205956Rat
2300188Bmd68Bone mineral density QTL 686.40.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)202660884356205956Rat
1331747Hrtrt16Heart rate QTL 163.163heart pumping trait (VT:2000009)heart rate (CMO:0000002)202671232356205956Rat
1598869Memor6Memory QTL 63.1exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)203091348156205956Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general animals used: 1 month old F2 female rats and parental rats 4889613
qtl_general measurement method: at 1 month of age right uninephrectomy was performed; animals were kept in metabolic cages and urine was collected 4889613
qtl_general software used: multienvironment analysis (MENVA); cosegregation analysis by ANOVA 4889613
qtl_general this linkage is observed in 1.5-5 months old female rats 4889613
qtl_general spans 17.7 cM with 95% confidence interval 4889613
qtl_general H allele was responsible for increased proteinuria 4889613