Mcs26 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Mcs26 (Mammary carcinoma susceptibility QTL 26) Rattus norvegicus

Symbol: Mcs26
Name: Mammary carcinoma susceptibility QTL 26
RGD ID: 4145118
Trait: mammary gland integrity trait   (VT:0010552)    
Measurement Type: post-insult time to mammary tumor formation   (CMO:0000345)    
LOD Score: Not Available
P Value: 1.0E-4
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.26106,752,656 - 132,339,866RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.06111,134,524 - 138,065,254RGD_MAPPER_PIPELINERnor6.0
Rnor_5.06120,420,333 - 147,057,860RGDRnor5.0
RGSC_v3.46111,239,053 - 138,260,635RGDRGSC3.4
Cross Type: intercross
Strains Crossed: SS.BN-(D6Rat119-D6Arb3)/Mcwi 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
1. Adamovic T, et al., Genes Chromosomes Cancer. 2010 Nov;49(11):1035-45.
Related QTLs

Related QTL Description Reference
Mcs27 maps to same region RGD:4143380


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1586427Pomt2protein-O-mannosyltransferase 26106755462106794849Rat
1589363Gstz1glutathione S-transferase zeta 16106794594106805284Rat
1589336Tmed8transmembrane p24 trafficking protein family member 86106806973106841271Rat
1589368Samd15sterile alpha motif domain containing 156106841405106860446Rat
1589353Noxred1NADP-dependent oxidoreductase domain containing 16106862350106888113Rat
1589291Vipas39VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog6106888284106913139Rat
1589285Ahsa1activator of Hsp90 ATPase activity 16106913296106921347Rat
1589343Ism2isthmin 26106921213106944291Rat
1305447Sptlc2serine palmitoyltransferase, long chain base subunit 26106948681107031584Rat
40944712LOC120103581uncharacterized LOC1201035816106953523106961774Rat
41145298LOC120103582uncharacterized LOC1201035826107013477107021229Rat
11519512LOC108351282uncharacterized LOC1083512826107054936107062699Rat
40978400LOC120103583uncharacterized LOC1201035836107060560107071738Rat
1308327Alkbh1alkB homolog 1, histone H2A dioxygenase6107068309107088779Rat
7489013Snora58small nucleolar RNA, H/ACA box 586107080945107081020Rat
1585290SlirpSRA stem-loop interacting RNA binding protein6107088760107097791Rat
41261849LOC120093286U6 spliceosomal RNA6107091675107091774Rat
1561926Snw1SNW domain containing 16107095450107119536Rat
1310843Gle1-ps1GLE1 RNA export mediator homolog (yeast), pseudogene 16107124892107127024Rat
41190543LOC120103584WW domain-binding protein 11-like6107141542107143455Rat
1561148RGD1561148similar to GLE1-like, RNA export mediator isoform 16107144085107146180Rat
41166107LOC120103585nucleoporin GLE1-like6107150543107152648Rat
41188981LOC120103586probable ATP-dependent RNA helicase DDX416107156477107157149Rat
1583694LOC503053similar to GLE1 RNA export mediator-like (yeast)6107159244107161420Rat
41279451LOC120093262nucleoporin GLE1-like6107183066107185118Rat
40990865LOC120103587probable ATP-dependent RNA helicase DDX416107185923107187961Rat
1565693RGD1565693similar to GLE1-like, RNA export mediator isoform 16107202205107204543Rat
40996730LOC120103427nucleoporin GLE1-like6107225279107227328Rat
1563496RGD1563496similar to WW domain binding protein 116107227781107230018Rat
6486301LOC100912568probable ATP-dependent RNA helicase DDX41-like6107230038107231786Rat
6497809LOC100910634nucleoporin GLE1-like6107236250107238366Rat
41008008LOC120103588WW domain-binding protein 11-like6107238873107240904Rat
1308263Adck1aarF domain containing kinase 16107277164107377057Rat
41324736LOC120103589uncharacterized LOC1201035896107352595107356059Rat
40972135LOC120093296U6 spliceosomal RNA6107418656107418761Rat
2323769LOC100362924hypothetical LOC1003629246107524191107525582Rat
620212Nrxn3neurexin 36107641760109272849Rat
41199415LOC120093218uncharacterized LOC1200932186108659149108678668Rat
41097438LOC120093220uncharacterized LOC1200932206109042644109052706Rat
41318117LOC120093219uncharacterized LOC1200932196109258517109267879Rat
11519988LOC108351283uncharacterized LOC1083512836109281426109294716Rat
41092179LOC120093263uncharacterized LOC1200932636109331773109333653Rat
41374377LOC120103428ADP-ribosylation factor 1-like6109430838109431318Rat
40931829LOC120103429glyceraldehyde-3-phosphate dehydrogenase-like6109431850109432842Rat
2323565LOC100363030hypothetical LOC1003630306109533134109534328Rat
68418Dio2iodothyronine deiodinase 26109665523109679809Rat
41221614LOC12010359040S ribosomal protein S10-like6109698310109702296Rat
41265170LOC120093441small nucleolar RNA SNORA176109773449109773570Rat
7592980LOC102549780uncharacterized LOC1025497806109829734109936672Rat
1595693Cep128centrosomal protein 1286109951009110328686Rat
3911Tshrthyroid stimulating hormone receptor6110341585110475297Rat
69246Gtf2a1general transcription factor 2A subunit 16110488891110521059Rat
41235214LOC120093479small nucleolar RNA SNORA796110505359110505501Rat
1311502Ston2stonin 26110567485110676376Rat
7593746LOC102551017uncharacterized LOC1025510176110591398110607433Rat
41173474LOC120103591low molecular weight phosphotyrosine protein phosphatase-like6110657818110672588Rat
620147Sel1lSEL1L adaptor subunit of ERAD E3 ubiquitin ligase6110735450110779695Rat
41259651LOC120103592uncharacterized LOC1201035926110747194110756876Rat
40952038LOC120103430ferritin light chain 1-like6110989982110994781Rat
1597103LOC366703similar to JTV16111083223111084179Rat
2323161LOC100363383hypothetical LOC1003633836111173160111175910Rat
1563312LOC500702LRRGT000516111464519111516476Rat
41114783LOC120103593uncharacterized LOC1201035936111580380111685123Rat
41324021LOC120093288U6 spliceosomal RNA6111923640111923746Rat
2322957LOC100363488hypothetical LOC1003634886112038960112040601Rat
41226908LOC120093484small nucleolar RNA U1096112175841112175977Rat
41110107LOC120093287U6 spliceosomal RNA6112215144112215251Rat
6487637LOC100912304non-histone chromosomal protein HMG-17-like6112241807112242098Rat
41008056LOC120103431protein arginine N-methyltransferase 1-like6112302396112303446Rat
41104183LOC120093390U1 spliceosomal RNA6112391313112391453Rat
1593493LOC689371similar to karyopherin (importin) alpha 26112516570112517700Rat
41082530LOC120093308U6 spliceosomal RNA6112567734112567838Rat
7532379LOC102556510uncharacterized LOC1025565106112647333112795278Rat
40955620LOC120103594uncharacterized LOC1201035946112752467112766151Rat
41111405LOC120093423U1 spliceosomal RNA6112778872112779027Rat
41186164LOC120093471small nucleolar RNA SNORA176112794531112794642Rat
41085348LOC120103595uncharacterized LOC1201035956112849326112890327Rat
1597102LOC366705similar to proliferation-associated 2G4, 38kDa6113241238113242425Rat
9078820LOC103692684small ubiquitin-related modifier 2 pseudogene6113315103113315382Rat
1597101LOC366706hypothetical LOC3667066113385570113386040Rat
41105615LOC120093496U4 spliceosomal RNA6113480735113480820Rat
1592286LOC689476hypothetical protein LOC6894766113712903113717609Rat
1597100LOC366709similar to prohibitin6113779124113781487Rat
41172970LOC120103596uncharacterized LOC1201035966113973500114024212Rat
41237657LOC120093277U6 spliceosomal RNA6114359059114359165Rat
7532737LOC102549466uncharacterized LOC1025494666114407998114425638Rat
7551483LOC102549614uncharacterized LOC1025496146114428052114467117Rat
11486546LOC108351288uncharacterized LOC1083512886114764986114777523Rat
1308574Flrt2fibronectin leucine rich transmembrane protein 26114777547114872688Rat
2323258LOC100359885hypothetical LOC1003598856115542815115543441Rat
11392001LOC108351289uncharacterized LOC1083512896115890070116122724Rat
41025785LOC120093264uncharacterized LOC1200932646116129519116147540Rat
41199239LOC120093265uncharacterized LOC1200932656116154915116173022Rat
7696501LOC102549969uncharacterized LOC1025499696116611295116762775Rat
7658560LOC102550062uncharacterized LOC1025500626116762814116822512Rat
1566048RGD1566048similar to polyglutamine tract binding protein-16116872017116875586Rat
6501076LOC100909953cofilin-1-like6116892014116892729Rat
41054297LOC120093266uncharacterized LOC1200932666117254744117258675Rat
1359384Galcgalactosylceramidase6117452888117522281Rat
1311832Gpr65G-protein coupled receptor 656117515786117536514Rat
619732Kcnk10potassium two pore domain channel subfamily K member 106117690052117826120Rat
41160803LOC120103597uncharacterized LOC1201035976117761295117766526Rat
41044336LOC120093320U7 small nuclear RNA6117846274117846336Rat
621010Spata7spermatogenesis associated 76117879828117925284Rat
620216Ptpn21protein tyrosine phosphatase, non-receptor type 216117933066117998095Rat
621850Zc3h14zinc finger CCCH type containing 146118006420118044480Rat
1303275Eml5EMAP like 56118046655118175831Rat
1307769Ttc8tetratricopeptide repeat domain 86118198186118252422Rat
631343Cpg1candidate plasticity gene 16118312220118324213Rat
7688606LOC102550434uncharacterized LOC1025504346118349962118388800Rat
1305711Foxn3forkhead box N36118462018118842442Rat
7690509LOC102550790uncharacterized LOC1025507906118621692118624492Rat
7744018LOC102550560uncharacterized LOC1025505606118842643118860217Rat
11463868LOC108351290uncharacterized LOC1083512906118980141118993039Rat
1565006Efcab11EF-hand calcium binding domain 116119008908119162994Rat
41092923LOC120103598uncharacterized LOC1201035986119121338119134319Rat
1309618Tdp1tyrosyl-DNA phosphodiesterase 16119163192119231029Rat
68941Kcnk13potassium two pore domain channel subfamily K member 136119240825119345292Rat
41185972LOC120103599uncharacterized LOC1201035996119332947119343742Rat
2323066LOC100359979malate dehydrogenase, cytoplasmic-like6119361879119371771Rat
41337983LOC120093267peroxiredoxin-1-like6119378967119380117Rat
621097Psmc1proteasome 26S subunit, ATPase 16119392833119405233Rat
41270223LOC120093474small nucleolar RNA SNORA406119394859119394983Rat
1565082Nrde2NRDE-2, necessary for RNA interference, domain containing6119405103119446861Rat
2257Calm1calmodulin 16119487691119495759Rat
1305920Ttc7btetratricopeptide repeat domain 7B6119587389119799155Rat
1308336Rps6ka5ribosomal protein S6 kinase A56119828823120006190Rat
41252287LOC120093307U6 spliceosomal RNA6119915820119915922Rat
1585283LOC688724similar to transmembrane protein 116119916575119960703Rat
41188505LOC120103600transmembrane protein 11, mitochondrial-like6119960922119962172Rat
40949054LOC120103601uncharacterized LOC1201036016119987830119990735Rat
1311756DglucyD-glutamate cyclase6120055480120130910Rat
41349033LOC120103602uncharacterized LOC1201036026120105366120116156Rat
1309559Gpr68G protein-coupled receptor 686120135620120166089Rat
1307429Ccdc88ccoiled-coil domain containing 88C6120169752120289459Rat
1309059Ppp4r3aprotein phosphatase 4, regulatory subunit 3A6120302508120365907Rat
1585189LOC690022similar to 40S ribosomal protein S36120369120120370007Rat
41252196LOC12010360340S ribosomal protein SA-like6120376528120380324Rat
1564044Kif4bkinesin family member 4B6120394401120401659Rat
6500065Catsperbcation channel sperm associated auxiliary subunit beta6120418606120713160Rat
7742786LOC102547705glucose-6-phosphate 1-dehydrogenase-like6120474077120476510Rat
41063312LOC120093506U6 spliceosomal RNA6120492486120492592Rat
2322650LOC100360199neugrin-like6120510829120511890Rat
41039793LOC120093182neugrin-like6120523873120524934Rat
1563876Tc2ntandem C2 domains, nuclear6120761112120856835Rat
2594Fbln5fibulin 56120899219120977829Rat
1586166Trip11thyroid hormone receptor interactor 116120995242121067693Rat
41005495LOC120103604uncharacterized LOC1201036046121067891121073737Rat
621567Atxn3ataxin 36121072228121107902Rat
7555383LOC102547799putative 60S ribosomal protein L37a-like6121084365121085020Rat
6487218Ndufb1NADH:ubiquinone oxidoreductase subunit B16121115649121124056Rat
6489824LOC100911956protein LLP homolog6121118419121119529Rat
1309687Cpsf2cleavage and polyadenylation specific factor 26121123941121152756Rat
1305926Slc24a4solute carrier family 24 member 46121278746121419811Rat
1305849Rin3Ras and Rab interactor 36121431803121540957Rat
619832Lgmnlegumain6121544048121582495Rat
7543021LOC102548124uncharacterized LOC1025481246121589794121604176Rat
1308163Golga5golgin A56121612389121640552Rat
9191681LOC103692694uncharacterized LOC1036926946121659956121661648Rat
2338Chgachromogranin A6121696051121707399Rat
1595691Itpk1inositol-tetrakisphosphate 1-kinase6121710750121844501Rat
7693843LOC102548189uncharacterized LOC1025481896121794957121797774Rat
41340807LOC120103605uncharacterized LOC1201036056121848789121855202Rat
7636337LOC102548370uncharacterized LOC1025483706121855315121864621Rat
1307230Moap1modulator of apoptosis 16121882565121884500Rat
2302582Gon7GON7 subunit of KEOPS complex6121882565121898452Rat
1566396Tmem251transmembrane protein 2516121884554121886710Rat
1359144Ubr7ubiquitin protein ligase E3 component n-recognin 76121898613121918480Rat
41366638LOC120103606uncharacterized LOC1201036066121909716121916468Rat
1306262Btbd7BTB domain containing 76121920365122010114Rat
6489562LOC100912037nuclear nucleic acid-binding protein C1D-like6121934209121936415Rat
727840Cox8ccytochrome c oxidase subunit 8C6122028566122029889Rat
1311117Unc79unc-79 homolog, NALCN channel complex subunit6122082369122327641Rat
11362626LOC108351291alpha-enolase pseudogene6122171317122172034Rat
11413859LOC108351292uncharacterized LOC1083512926122329881122337637Rat
1583978Prima1proline rich membrane anchor 16122338365122390955Rat
41027090LOC120103607uncharacterized LOC1201036076122464871122469084Rat
6504274Fam181afamily with sequence similarity 181, member A6122465373122471397Rat
1306414Asb2ankyrin repeat and SOCS box-containing 26122474754122511014Rat
7501932LOC102549032uncharacterized LOC1025490326122517517122527967Rat
1306688Otub2OTU deubiquitinase, ubiquitin aldehyde binding 26122545029122563651Rat
727929Ddx24DEAD-box helicase 246122564767122582032Rat
69404Ifi27interferon, alpha-inducible protein 276122590461122596996Rat
1559721Ifi27l2binterferon, alpha-inducible protein 27 like 2B6122598872122600358Rat
11359726LOC108351293uncharacterized LOC1083512936122642415122658489Rat
1560932Ppp4r4protein phosphatase 4, regulatory subunit 46122663172122753988Rat
621220Serpina10serpin family A member 106122756106122764544Rat
1595901Serpina6serpin family A member 66122780040122790274Rat
727888Serpina16serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 166122800869122808247Rat
1307899Serpina1fserpin family A member 1F6122820752122827112Rat
1597377LOC690311similar to Alpha-1-antitrypsin-related protein precursor6122825598122835059Rat
1597369LOC690319similar to Alpha-1-antitrypsin-related protein precursor6122846808122858814Rat
3326Serpina1serpin family A member 16122866314122888339Rat
1359239Serpina11serpin family A member 116122903246122912695Rat
1304789Serpina9serpin family A member 96122918819122936000Rat
708485Serpina12serpin family A member 126122952552122967271Rat
11395481LOC108351294uncharacterized LOC1083512946122952602122955489Rat
708581Serpina4serpin family A member 46122999970123009083Rat
619817Serpina5serpin family A member 56123009224123028412Rat
735068Serpina3mserpin family A member 3M6123064796123072087Rat
1584965LOC314407similar to importin 116123087818123090978Rat
1595900LOC299277similar to serine (or cysteine) peptidase inhibitor, clade A, member 3B6123119647123135364Rat
6503028LOC100909567serine protease inhibitor A3B-like6123147517123153390Rat
6502633Serpina3aserine (or cysteine) peptidase inhibitor, clade A, member 3A6123176131123183731Rat
1562479LOC500712Ab1-2336123190004123211974Rat
2972Serpina3cserine (or cysteine) proteinase inhibitor, clade A, member 3C6123240251123250219Rat
3745LOC299282Serine protease inhibitor6123298365123305804Rat
40957580LOC120103608uncharacterized LOC1201036086123298756123314131Rat
41196056LOC120093080serine protease inhibitor A3N-like6123309743123313171Rat
3747Serpina3nserine (or cysteine) peptidase inhibitor, clade A, member 3N6123323632123331166Rat
41078264LOC120093457small nucleolar RNA SNORA176123334321123334451Rat
1596073LOC690435hypothetical protein LOC6904356123343759123367480Rat
631425Gscgoosecoid homeobox6123388072123390111Rat
1309381Dicer1dicer 1 ribonuclease III6123627529123692278Rat
1306741Clmncalmin6123707710123807283Rat
7670252LOC102555497uncharacterized LOC1025554976123807388123825407Rat
1304563Syne3spectrin repeat containing, nuclear envelope family member 36123872895123964773Rat
41330629LOC120103609uncharacterized LOC1201036096123885118123886137Rat
41088236LOC120103610uncharacterized LOC1201036106123970723123979025Rat
1563476Rpl6-ps1ribosomal protein L6, pseudogene 16123976019123977001Rat
41213172LOC120103611uncharacterized LOC1201036116123982949123986908Rat
41139916LOC120093414small Cajal body-specific RNA 136123986822123987096Rat
1308383Glrx5glutaredoxin 56123988169123998545Rat
6487778LOC100912332uncharacterized LOC1009123326123995949123998436Rat
9440657LOC103692698MLV-related proviral Env polyprotein-like6124077969124079979Rat
1594686Tcl1aTcl1 family Akt coactivator A6124125032124131025Rat
41155533LOC120103612MLV-related proviral Env polyprotein-like6124185344124193006Rat
40981983LOC120103613uncharacterized LOC1201036136124190680124192684Rat
41061531LOC120103614uncharacterized LOC1201036146124245949124293440Rat
6501064LOC100909954uncharacterized LOC1009099546124365466124398449Rat
7729657LOC102550757uncharacterized LOC1025507576124377500124379015Rat
2201Bdkrb2bradykinin receptor B26124472317124502497Rat
41013013LOC120103615uncharacterized LOC1201036156124487294124510781Rat
620401Bdkrb1bradykinin receptor B16124510827124514475Rat
1304878Atg2bautophagy related 2B6124522283124592412Rat
1308470GskipGSK3B interacting protein6124586087124609106Rat
1309600Ak7adenylate kinase 76124611789124679978Rat
1308673Papolapoly (A) polymerase alpha6124682015124734706Rat
41171343NEWGENE_40926764transfer RNA proline (anticodon AGG)6124718914124718994Rat
41398603LOC120103616uncharacterized LOC1201036166124801304124804030Rat
1306069Vrk1VRK serine/threonine kinase 16124914770124981508Rat
41311451LOC120093472small nucleolar RNA SNORA176125122345125122428Rat
7677646LOC102551214uncharacterized LOC1025512146125188093125190513Rat
40944336LOC12009326860S ribosomal protein L21-like6125306340125306820Rat
7574917LOC102554026uncharacterized LOC1025540266125388033125393933Rat
1311128Bcl11bBAF chromatin remodeling complex subunit BCL11B6126834531126927720Rat
9338625LOC103692704uncharacterized LOC1036927046126862869126863838Rat
9170090LOC103692702uncharacterized LOC1036927026126902609126910743Rat
1309550Setd3SET domain containing 3, actin histidine methyltransferase6127023058127090020Rat
1595690Ccnkcyclin K6127090115127113195Rat
1589818Ccdc85ccoiled-coil domain containing 85C6127113440127184328Rat
41146325LOC120103617uncharacterized LOC1201036176127125741127128210Rat
41340039LOC120103618uncharacterized LOC1201036186127146213127156888Rat
1311698Hhipl1HHIP-like 16127219616127243839Rat
1306605Cyp46a1cytochrome P450, family 46, subfamily a, polypeptide 16127243315127274765Rat
41049116LOC120103619uncharacterized LOC1201036196127279924127284440Rat
1306374Eml1EMAP like 16127283968127457246Rat
40980064LOC120103620uncharacterized LOC1201036206127316410127320301Rat
621150EvlEnah/Vasp-like6127473119127594342Rat
7576094LOC102555052uncharacterized LOC1025550526127527181127572823Rat
11419405LOC108351298E3 ubiquitin-protein ligase RNF34 pseudogene6127533673127541662Rat
2325615Mir342microRNA 3426127565269127565367Rat
1305023Degs2delta(4)-desaturase, sphingolipid 26127596063127613293Rat
1588675Ybx1-ps7Y box protein 1 related, pseudogene 76127657373127658746Rat
11503689LOC108351299uncharacterized LOC1083512996127666911127676950Rat
41335931LOC120103621uncharacterized LOC1201036216127678080127686970Rat
3982Yy1YY1 transcription factor6127706739127731907Rat
9439988LOC103692705S-phase kinase-associated protein 1 pseudogene6127712011127722620Rat
1308104Slc25a29solute carrier family 25 member 296127742027127752915Rat
2325465Mir345microRNA 3456127754027127754122Rat
1303247Slc25a47solute carrier family 25, member 476127767365127773000Rat
1308278Wars1tryptophanyl-tRNA synthetase 16127776088127807273Rat
1562505Wdr25WD repeat domain 256127807347127939795Rat
708347Begainbrain-enriched guanylate kinase-associated6127943651127979876Rat
9325997LOC10369271440S ribosomal protein S18-like6128196864128208694Rat
7729423LOC102555774uncharacterized LOC1025557746128368728128369886Rat
41023111LOC120103622uncharacterized LOC1201036226128369997128387872Rat
619931Dlk1delta like non-canonical Notch ligand 16128410216128417518Rat
1566401RGD1566401similar to GTL2, imprinted maternally expressed untranslated6128491808128524010Rat
2325415Mir770microRNA 7706128515843128515918Rat
2325493Mir673microRNA 6736128524261128524343Rat
2325524Mir493microRNA 4936128532492128532575Rat
2325618Mir337microRNA 3376128538903128538999Rat
4888562Mir3544microRNA 35446128538915128539002Rat
2325368Mir540microRNA 5406128539185128539268Rat
2325437Mir665microRNA 6656128539440128539533Rat
11378340Rtl1retrotransposon-like 16128543904128549384Rat
2325450Mir431microRNA 4316128544210128544323Rat
2325423Mir433microRNA 4336128545119128545211Rat
2325430Mir127microRNA 1276128546215128546311Rat
7664637LOC102555254uncharacterized LOC1025552546128546730128737570Rat
4888615Mir3543microRNA 35436128548130128548244Rat
2325442Mir434microRNA 4346128548163128548243Rat
2325384Mir136microRNA 1366128549096128549177Rat
9685630Mir341microRNA 3416128565581128565676Rat
4888588Mir1188microRNA 11886128565919128566000Rat
2325369Mir370microRNA 3706128572257128572335Rat
41224543LOC120093404small nucleolar RNA SNORD113/SNORD114 family6128585558128585628Rat
41244973LOC120093411small nucleolar RNA SNORD113/SNORD114 family6128600461128600532Rat
41348930LOC120093405small nucleolar RNA SNORD113/SNORD114 family6128602941128603014Rat
41189413LOC120093406small nucleolar RNA SNORD113/SNORD114 family6128605921128606002Rat
41029651LOC120093358small nucleolar RNA SNORD113/SNORD114 family6128606833128606913Rat
41156922LOC120093410small nucleolar RNA SNORD113/SNORD114 family6128607734128607815Rat
41390874LOC120093354small nucleolar RNA SNORD113/SNORD114 family6128608583128608663Rat
41196598LOC120093384small nucleolar RNA SNORD113/SNORD114 family6128609468128609557Rat
41245168LOC120093374small nucleolar RNA SNORD113/SNORD114 family6128610367128610447Rat
41168923LOC120093376small nucleolar RNA SNORD113/SNORD114 family6128611249128611334Rat
41088076LOC120093378small nucleolar RNA SNORD113/SNORD114 family6128612139128612232Rat
41400444LOC120093389small nucleolar RNA SNORD113/SNORD114 family6128613035128613119Rat
41158859LOC120093359small nucleolar RNA SNORD113/SNORD114 family6128613924128614009Rat
41344747LOC120093373small nucleolar RNA SNORD113/SNORD114 family6128614814128614899Rat
41394202LOC120093347small nucleolar RNA SNORD113/SNORD114 family6128615703128615797Rat
41266297LOC120093380small nucleolar RNA SNORD113/SNORD114 family6128616600128616685Rat
41020046LOC120093348small nucleolar RNA SNORD113/SNORD114 family6128617490128617584Rat
41287336LOC120093349small nucleolar RNA SNORD113/SNORD114 family6128618385128618479Rat
41356638LOC120093321small nucleolar RNA SNORD113/SNORD114 family6128619282128619366Rat
41023625LOC120093350small nucleolar RNA SNORD113/SNORD114 family6128620173128620263Rat
41384195LOC120093341small nucleolar RNA SNORD113/SNORD114 family6128621064128621155Rat
41133404LOC120093334small nucleolar RNA SNORD113/SNORD114 family6128621960128622046Rat
41199827LOC120093371small nucleolar RNA SNORD113/SNORD114 family6128622851128622945Rat
41362567LOC120093343small nucleolar RNA SNORD113/SNORD114 family6128623750128623830Rat
41236974LOC120093397small nucleolar RNA SNORD113/SNORD114 family6128624638128624730Rat
41054114LOC120093323small nucleolar RNA SNORD113/SNORD114 family6128625535128625619Rat
41122326LOC120093344small nucleolar RNA SNORD113/SNORD114 family6128626423128626516Rat
41261948LOC120093360small nucleolar RNA SNORD113/SNORD114 family6128627320128627400Rat
41288671LOC120093398small nucleolar RNA SNORD113/SNORD114 family6128628206128628291Rat
41118376LOC120093372small nucleolar RNA SNORD113/SNORD114 family6128629093128629186Rat
40948191LOC120093382small nucleolar RNA SNORD113/SNORD114 family6128629993128630073Rat
41401479LOC120093388small nucleolar RNA SNORD113/SNORD114 family6128630879128630964Rat
41040063LOC120093337small nucleolar RNA SNORD113/SNORD114 family6128631767128631856Rat
41180861LOC120093361small nucleolar RNA SNORD113/SNORD114 family6128632662128632742Rat
40937433LOC120093328small nucleolar RNA SNORD113/SNORD114 family6128633548128633635Rat
41276741LOC120093338small nucleolar RNA SNORD113/SNORD114 family6128634442128634531Rat
41325645LOC120093356small nucleolar RNA SNORD113/SNORD114 family6128635336128635420Rat
41338607LOC120093340small nucleolar RNA SNORD113/SNORD114 family6128636229128636319Rat
41284066LOC120093329small nucleolar RNA SNORD113/SNORD114 family6128637122128637209Rat
40976240LOC120093325small nucleolar RNA SNORD113/SNORD114 family6128638011128638097Rat
41247829LOC120093362small nucleolar RNA SNORD113/SNORD114 family6128638898128638978Rat
40972851LOC120093330small nucleolar RNA SNORD113/SNORD114 family6128639784128639871Rat
41326035LOC120093326small nucleolar RNA SNORD113/SNORD114 family6128640674128640760Rat
40935150LOC120093377small nucleolar RNA SNORD113/SNORD114 family6128641568128641648Rat
41093004LOC120093332small nucleolar RNA SNORD113/SNORD114 family6128642454128642542Rat
41336004LOC120093327small nucleolar RNA SNORD113/SNORD114 family6128643345128643431Rat
41309799LOC120093333small nucleolar RNA SNORD113/SNORD114 family6128644237128644325Rat
41147718LOC120093342small nucleolar RNA SNORD113/SNORD114 family6128645131128645222Rat
41149207LOC120093352small nucleolar RNA SNORD113/SNORD114 family6128646026128646114Rat
41348190LOC120093363small nucleolar RNA SNORD113/SNORD114 family6128646922128647002Rat
41399987LOC120093345small nucleolar RNA SNORD113/SNORD114 family6128647809128647902Rat
41279125LOC120093381small nucleolar RNA SNORD113/SNORD114 family6128648708128648796Rat
40970300LOC120093364small nucleolar RNA SNORD113/SNORD114 family6128649604128649684Rat
41267199LOC120093353small nucleolar RNA SNORD113/SNORD114 family6128650489128650574Rat
41125462LOC120093365small nucleolar RNA SNORD113/SNORD114 family6128651382128651462Rat
41244694LOC120093351small nucleolar RNA SNORD113/SNORD114 family6128652269128652353Rat
41315408LOC120093366small nucleolar RNA SNORD113/SNORD114 family6128653162128653242Rat
41064761LOC120093331small nucleolar RNA SNORD113/SNORD114 family6128654051128654138Rat
41164084LOC120093355small nucleolar RNA SNORD113/SNORD114 family6128654939128655031Rat
41362480LOC120093367small nucleolar RNA SNORD113/SNORD114 family6128655837128655917Rat
41251471LOC120093339small nucleolar RNA SNORD113/SNORD114 family6128656723128656813Rat
41329629LOC120093369small nucleolar RNA SNORD113/SNORD114 family6128657621128657701Rat
41241342LOC120093336small nucleolar RNA SNORD113/SNORD114 family6128658508128658597Rat
41035849LOC120093322small nucleolar RNA SNORD113/SNORD114 family6128659404128659487Rat
41290586LOC120093370small nucleolar RNA SNORD113/SNORD114 family6128660294128660374Rat
41185800LOC120093392small nucleolar RNA SNORD113/SNORD114 family6128661181128661261Rat
41328737LOC120093409small nucleolar RNA SNORD113/SNORD114 family6128680869128680943Rat
41280372LOC120093391small nucleolar RNA SNORD113/SNORD114 family6128683564128683638Rat
41397045LOC120093385small nucleolar RNA SNORD113/SNORD114 family6128684429128684503Rat
41351694LOC120093399small nucleolar RNA SNORD113/SNORD114 family6128685136128685210Rat
41275552LOC120093402small nucleolar RNA SNORD113/SNORD114 family6128686121128686195Rat
41256622LOC120093393small nucleolar RNA SNORD113/SNORD114 family6128686834128686908Rat
41378797LOC120093383small nucleolar RNA SNORD113/SNORD114 family6128687695128687769Rat
41315759LOC120093394small nucleolar RNA SNORD113/SNORD114 family6128688406128688480Rat
41076723LOC120093387small nucleolar RNA SNORD113/SNORD114 family6128689272128689346Rat
40977525LOC120093395small nucleolar RNA SNORD113/SNORD114 family6128689983128690057Rat
40939369LOC120093375small nucleolar RNA SNORD113/SNORD114 family6128690850128690924Rat
40972370LOC120093400small nucleolar RNA SNORD113/SNORD114 family6128691555128691629Rat
41390018LOC120093403small nucleolar RNA SNORD113/SNORD114 family6128692417128692491Rat
41186844LOC120093396small nucleolar RNA SNORD113/SNORD114 family6128693128128693202Rat
41057966LOC120093386small nucleolar RNA SNORD113/SNORD114 family6128693996128694070Rat
41256286LOC120093407small nucleolar RNA SNORD113/SNORD114 family6128698386128698448Rat
41276988LOC120093408small nucleolar RNA SNORD113/SNORD114 family6128698823128698888Rat
2325447Mir379microRNA 3796128722040128722124Rat
2325500Mir411microRNA 4116128723189128723264Rat
4888603Mir299bmicroRNA 299b6128723635128723752Rat
2325540Mir299microRNA 2996128723664128723726Rat
4888583Mir3579microRNA 35796128724813128724925Rat
2325443Mir380microRNA 3806128724830128724906Rat
2325625Mir323microRNA 3236128725539128725624Rat
2325440Mir758microRNA 7586128725838128725915Rat
2325621Mir329microRNA 3296128726508128726604Rat
2325523Mir494microRNA 4946128728710128728792Rat
4888541Mir1193microRNA 11936128729038128729157Rat
2325471Mir666microRNA 6666128730863128730961Rat
2325526Mir543microRNA 5436128731000128731079Rat
2325496Mir495microRNA 4956128732650128732729Rat
2325472Mir667microRNA 6676128733932128734023Rat
2325522Mir376cmicroRNA 376c6128736800128736883Rat
2325421Mir376bmicroRNA 376b6128737456128737541Rat
41239806LOC120103623uncharacterized LOC1201036236128737719128764820Rat
4888533Mir3595microRNA 35956128737948128738067Rat
2325367Mir376amicroRNA 376a6128737966128738047Rat
2325424Mir300microRNA 3006128738513128738591Rat
2325521Mir381microRNA 3816128740976128741036Rat
2325343Mir487bmicroRNA 487b6128741485128741566Rat
4888585Mir3576microRNA 35766128742173128742287Rat
2325448Mir539microRNA 5396128742193128742268Rat
7489042Mir6331microRNA 63316128742939128743061Rat
2325481Mir544microRNA 5446128743530128743607Rat
4888569Mir3592microRNA 35926128748522128748637Rat
2325520Mir382microRNA 3826128748539128748618Rat
2325429Mir134microRNA 1346128748908128748980Rat
2325353Mir668microRNA 6686128749502128749569Rat
2325519Mir485microRNA 4856128749660128749738Rat
2325562Mir154microRNA 1546128752947128753030Rat
2325410Mir496microRNA 4966128753644128753722Rat
2325344Mir377microRNA 3776128755051128755122Rat
2325525Mir541microRNA 5416128757016128757105Rat
4888593Mir3581microRNA 35816128757779128757858Rat
2325366Mir409microRNA 4096128757780128757856Rat
2325529Mir412microRNA 4126128757932128758001Rat
4888586Mir3578microRNA 35786128758033128758149Rat
2325518Mir369microRNA 3696128758054128758132Rat
2325501Mir410microRNA 4106128758358128758433Rat
7489041Mir3072microRNA 30726128763161128763271Rat
1597098LOC366728similar to ribosomal protein L3 isoform b6128829406128830595Rat
11366014LOC108351376uncharacterized LOC1083513766129009585129011926Rat
41243105LOC120103432small nuclear ribonucleoprotein E-like6129039209129040800Rat
41229061LOC120093269uncharacterized LOC1200932696129200778129205127Rat
9685092Mir1247microRNA 12476129284560129284641Rat
68420Dio3iodothyronine deiodinase 36129285747129287608Rat
7577271LOC102546875uncharacterized LOC1025468756129371186129378231Rat
7503814LOC102546759uncharacterized LOC1025467596129380639129386494Rat
2323734LOC100362959hypothetical LOC1003629596129418262129432562Rat
1585097Ppp2r5cprotein phosphatase 2, regulatory subunit B', gamma6129461689129598344Rat
7661450LOC102547242uncharacterized LOC1025472426129491681129503956Rat
41205767LOC120103624uncharacterized LOC1201036246129604949129609313Rat
2511Dync1h1dynein cytoplasmic 1 heavy chain 16129615208129680888Rat
1305298RGD1305298hypothetical LOC2993306129681598129697052Rat
631409Hsp90aa1heat shock protein 90 alpha family class A member 16129702376129707907Rat
7503866LOC102549239uncharacterized LOC1025492396129708104129713579Rat
11469370LOC10835137760S ribosomal protein L35a pseudogene6129733876129734339Rat
1306499Wdr20WD repeat domain 206129751952129821464Rat
1309274MokMOK protein kinase6129823794129854669Rat
41131355LOC120103625uncharacterized LOC1201036256129845325129845894Rat
11458125LOC108351302uncharacterized LOC1083513026129854738129863427Rat
11511766Trnai-aau3transfer RNA isoleucine (anticodon AAU) 36129861605129861678Rat
1562557Zfp839zinc finger protein 8396129865859129885816Rat
1563395Cinpcyclin-dependent kinase 2-interacting protein6129878618129899575Rat
1307503Tecpr2tectonin beta-propeller repeat containing 26129899541130001975Rat
1307662Ankrd9ankyrin repeat domain 96130001914130008792Rat
7505493Rcor1REST corepressor 16130069606130146164Rat
1304633Traf3Tnf receptor-associated factor 36130199696130307168Rat
1308634Amnamnion associated transmembrane protein6130311372130318815Rat
621753Cdc42bpbCDC42 binding protein kinase beta6130333712130416631Rat
1560608Lbhd2LBH domain containing 26130442388130447229Rat
1307749Exoc3l4exocyst complex component 3-like 46130452680130466684Rat
41356785LOC120103626uncharacterized LOC1201036266130467443130473094Rat
1594556Tnfaip2TNF alpha induced protein 26130476832130489914Rat
1565168Diras3DIRAS family GTPase 36130524972130527690Rat
41118202LOC120103627uncharacterized LOC1201036276130569779130574608Rat
11471634NEWGENE_619861eukaryotic translation initiation factor 56130589200130597656Rat
41035339LOC120093420small nucleolar RNA SNORA286130591965130592090Rat
7596428LOC102554517transcription initiation factor TFIID subunit 4-like6130622749130626527Rat
619883Mark3microtubule affinity regulating kinase 36130626612130716245Rat
2357Ckbcreatine kinase B6130729420130732301Rat
1359191Trmt61atRNA methyltransferase 61A6130737230130743251Rat
41198477LOC120103628uncharacterized LOC1201036286130737998130755361Rat
40940579Trnal-aagtransfer RNA leucine (anticodon AAG)6130767014130767094Rat
1310847Bag5BAG cochaperone 56130768467130772122Rat
1304719Coa8cytochrome c oxidase assembly factor 86130772218130797081Rat
621411Klc1kinesin light chain 16130823416130866729Rat
1306849Xrcc3X-ray repair cross complementing 36130863405130873765Rat
1311036Zfyve21zinc finger FYVE-type containing 216130873979130894618Rat
1304651Ppp1r13bprotein phosphatase 1, regulatory subunit 13B6130890679130963845Rat
2324773LOC100363116hypothetical protein LOC1003631166130965834130967084Rat
41389307LOC120103629uncharacterized LOC1201036296130975672130984783Rat
7560279LOC102548399uncharacterized LOC1025483996130985687130994304Rat
6486223LOC1009125576.8 kDa mitochondrial proteolipid-like6131018884131024560Rat
1306942Tdrd9tudor domain containing 96131029644131145076Rat
1583936LOC691437similar to ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G6131033900131034615Rat
41340231LOC120093285U6 spliceosomal RNA6131037333131037439Rat
1305627Rd3lRD3 like6131042274131044178Rat
7592659LOC102548527rRNA 2'-O-methyltransferase fibrillarin-like6131060367131062187Rat
41138544LOC120103630uncharacterized LOC1201036306131083156131084717Rat
708388Aspgasparaginase6131176727131196268Rat
4888612Mir3545microRNA 35456131199542131199656Rat
2325452Mir203microRNA 2036131199556131199652Rat
1307957Kif26akinesin family member 26A6131214839131250874Rat
41155964LOC120103631uncharacterized LOC1201036316131313678131323420Rat
11496885LOC108351305uncharacterized LOC1083513056131401122131404173Rat
7699217LOC102549170uncharacterized LOC1025491706131426493131441332Rat
1583888LOC691485hypothetical protein LOC6914856131557193131568245Rat
1310269Tmem179transmembrane protein 1796131569289131580413Rat
7641989LOC102552388uncharacterized LOC1025523886131610430131618103Rat
1308350Inf2inverted formin 26131649162131675944Rat
41211209LOC120103632uncharacterized LOC1201036326131651932131655552Rat
1590342Adss1adenylosuccinate synthase 16131679795131702012Rat
1561872Siva1SIVA1, apoptosis-inducing factor6131705312131709697Rat
2081Akt1AKT serine/threonine kinase 16131713716131735319Rat
1582758Zbtb42zinc finger and BTB domain containing 426131734257131742459Rat
41015372LOC120103633uncharacterized LOC1201036336131770154131771798Rat
1595689Cep170bcentrosomal protein 170B6131780935131806658Rat
1598308Pld4phospholipase D family, member 46131818860131827457Rat
1309696Ahnak2AHNAK nucleoprotein 26131830668131876311Rat
1307315Clba1clathrin binding box of aftiphilin containing 16131882866131889662Rat
1563593Cdca4cell division cycle associated 46131892305131901571Rat
1310817Gpr132G protein-coupled receptor 1326131924061131943327Rat
9430186LOC103692726keratin-associated protein 5-9-like6131964378131965166Rat
2938Jag2jagged canonical Notch ligand 26131983056132005359Rat
1310583Nudt14nudix hydrolase 146132010309132017298Rat
1311158Brf1BRF1, RNA polymerase III transcription initiation factor subunit6132034380132081296Rat
1597323Btbd6BTB domain containing 66132058094132060603Rat
1597262Pacs2phosphofurin acidic cluster sorting protein 26132096992132156702Rat
1597257Tex22testis expressed 226132156831132170791Rat
41282453LOC120093499U4 spliceosomal RNA6132175479132175610Rat
621018Mta1metastasis associated 16132178608132217641Rat
1302959Crip2cysteine-rich protein 26132221120132226066Rat
1597237Crip1cysteine rich protein 16132226746132234620Rat
1596085Tedc1tubulin epsilon and delta complex 16132234764132245164Rat
1597216Tmem121transmembrane protein 1216132262110132265797Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10360D6Mit61476130731912130732059Ratregion
10361D6Wox132716130729205130729475Ratregion
10363D6Arb12626130729295130729557Ratregion
10393D6Wox211266132232243132232369Ratregion
10507D6Mgh21476127656788127656935Ratregion
10781D14Mgh42506132309318132309572Ratregion
33889D6Mit161846128713440128713626Ratregion
34015D6Mit101296129385193129385326Ratregion
34098D6Mgh31686122549046122549218Ratregion
34290D18Mgh41266118921813118921891Ratregion
34365D6Mgh11346130543317130543455Ratregion
34427D6Mgh91336118421730118421843Ratregion
36005D6Rat91656121656333121656498Ratregion
37224D6Rat1603486117977041117977405Ratregion
35198D6Rat111766110547827110548006Ratregion
35360D6Rat51746125581026125581200Ratregion
36990D6Rat121516109394713109394864Ratregion
37714D6Rat751586122626026122626198Ratregion
37730D6Rat572226107366652107366874Ratregion
35048D6Rat71476120247200120247348Ratregion
35080D6Rat81666123103746123103896Ratregion
35619D6Rat21486132297932132298080Ratregion
35725D6Rat481286109150645109150773Ratregion
39650D6Rat1112496121497441121497700Ratregion
39672D6Rat1122486120089661120089904Ratregion
38130D6Rat662026107640035107640241Ratregion
38282D6Rat792246125628133125628353Ratregion
38390D6Rat812286107351142107351382Ratregion
38600D6Rat941036126072500126072611Ratregion
40144D6Rat1191696106752656106752806Ratregion
39052D6Rat1011206130245261130245370Ratregion
39256D6Rat781246130919869130919985Ratregion
39412D6Rat1132466107515243107515486Ratregion
39442D6Rat1152426111837996111838254Ratregion
42200D6Arb32876132339579132339866Ratregion
42773D6Rat1882326110070288110070532Ratregion
42803D6Rat1912456107657913107658155Ratregion
42805D6Rat1862416114108956114109195Ratregion
42806D6Rat1612476114345543114345768Ratregion
42807D6Rat1852496113013643113013917Ratregion
42809D6Rat1841286116506292116506390Ratregion
42811D6Rat1811246129836303129836423Ratregion
42812D6Rat1821306128273199128273349Ratregion
42812D6Rat1821306128273199128273349Ratregion
41270D6Rat1141746114294372114294552Ratregion
41368D6Rat1161356109807978109808111Ratregion
41650D6Rat1591336128341393128341544Ratregion
44145D6Wox61486115902687115902834Ratregion
44146D6Got1601906116469747116469937Ratregion
44147D6Got157916110678941110679032Ratregion
44148D6Got1522066109325847109326056Ratregion
44148D6Got1522066109325847109325966Ratregion
44148D6Got1522066109325494109326056Ratregion
44149D6Got1561526109323525109323677Ratregion
44150D6Got1491156107711301107711416Ratregion
44151D6Got1581076110645599110645706Ratregion
44152D6Got1441756107945157107945332Ratregion
44153D6Got1631236113890113113890236Ratregion
44154D6Got1611236115011219115011338Ratregion
44156D6Got1532476111274790111275037Ratregion
44157D6Got1502386108387206108387444Ratregion
44158D6Got1452256107997522107997747Ratregion
44159D6Got1431176107546258107546448Ratregion
44159D6Got1431176107546258107546370Ratregion
44170D6Got1472676108925741108926011Ratregion
44173D6Wox5996112636280112636374Ratregion
44174D6Got1722946117562022117562316Ratregion
44175D6Got1681586117388282117388440Ratregion
44176D6Got2011436114921569114921712Ratregion
44177D6Got1661916118461276118461469Ratregion
44178D6Wox71836117827828117828013Ratregion
44179D6Got2022826118635166118635448Ratregion
44180D6Got1701306118791062118791192Ratregion
44181D6Got1711796118862865118863044Ratregion
44182D6Got1621746116626397116626573Ratregion
44183D6Got1841386125925635125925773Ratregion
44186D6Got1832906125371459125371749Ratregion
44187D6Got1802946126511308126511603Ratregion
44188D6Got1811136127601113127601226Ratregion
44189D6Got1792986128464679128464975Ratregion
44190D6Got1911666129836287129836453Ratregion
44191D6Got1852846128713430128713716Ratregion
44193D6Got1821696128401761128401930Ratregion
44197D6Got1872276130187291130187513Ratregion
44198D6Got1782726124108071124108345Ratregion
44199D6Got1751836123933283123933466Ratregion
44201D6Got1742186120898326120898544Ratregion
44202D6Got1641066113890108113890214Ratregion
44204D6Got1511496122296576122296725Ratregion
60526D6Got200746108268391108268465Ratregion
60540D6Got442376130547128130547310Ratregion
60512D6Got1462706107039658107039928Ratregion
60513D6Got1481856116349344116349529Ratregion
60515D6Got1552896108578828108579117Ratregion
60517D6Got1691886118638680118638868Ratregion
60518D6Got1731096120989731120989835Ratregion
60519D6Got1921836131305457131305640Ratregion
60812D6Wox83206120992815120993177Ratregion
69537D6Uwm41516123939462123939627Ratregion
625783D6Got1772426123676097123676336Ratregion
66623D6Uia51616109324553109324712Ratregion
1627761D6Got3071226121604142121604262Ratregion
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5080786RH1417811956129885412129885722Ratregion
5085206AW5326401416128510388128510529Ratregion
5081116RH1419741816127249092127249273Ratregion
5085603AW5281971756122206686122206861Ratregion
5090145AU0495762566118190653118190909Ratregion
5089187AU0490071536131878966131879119Ratregion
5089215AU0490231536120259648120259801Ratregion
5081378AI0724791976127456981127457179Ratregion
5082543BE1196751516118462559118462710Ratregion
5082583BF4163882396109137350109137588Ratregion
5082619BE1198611686129869460129869628Ratregion
5084562AI4104391966122529084122529280Ratregion
5084584AA9463871016121152526121152627Ratregion
5082765BF3900542466114833762114834008Ratregion
5081114RH1419731906129882735129882925Ratregion
5086429BE1070211506106824919106825069Ratregion
5086547BM3872641806120174773120174953Ratregion
5081569BE1174291506120183175120183325Ratregion
5085210BE0964461586130768545130768703Ratregion
5085250BF4057232406106924364106924604Ratregion
5083465BF3913652196119685021119685240Ratregion
5083537BI2760971366130318434130318570Ratregion
5083581BI2828981916130768960130769151Ratregion
5086683BE1152661956106957199106957394Ratregion
5086691BE1152791606108657946108658106Ratregion
5086739AI0082352206110736496110736716Ratregion
5085768AA9449331846128661670128661854Ratregion
5085770AI1013202056131988972131989365Ratregion
5085924BE1116011856131716576131716887Ratregion
5083996AI2317951336127736071127736204Ratregion
5507567D17S17899506131984729131985679Ratregion
5507569G621051596106921098106921257Ratregion
5503646UniSTS:46545906131984610131984888Ratregion
5507616D10Bir4856132232906132234096Ratregion
5507624D12Bwg1266e2506128509761128510325Ratregion
5504320D14S700E1636122327373122327536Ratregion
5504572PMC305791P25386123388450123388988Ratregion
5504724PMC84716P12126127707884127708096Ratregion
5504845ha249214216129262036129263649Ratregion
5505026Mirg5406128763079128763619Ratregion
5505290Dlk12166128416794128417010Ratregion
5505304Ppp2r5c1426129560682129562176Ratregion
5505710UniSTS:48953014456129285776129287221Ratregion
5505861UniSTS:4959603296124513072124513401Ratregion
5506175UniSTS:4986918666123672314123673180Ratregion
5506561PPP2R5C_460.27846129597292129598076Ratregion
5506497GDB:13176409176118651692118652609Ratregion
5506953REN478822416126875656126875897Ratregion
5506955REN479272906126883083126883373Ratregion
5507139UniSTS:2248161066121303322121303428Ratregion
5507159UniSTS:2248751646129808750129808914Ratregion
5506947REN477042846126836818126837102Ratregion
5506949REN477092576126838402126838659Ratregion
5506951REN476992346126835712126835946Ratregion
5506957REN479762876126893425126893712Ratregion
5500117UniSTS:2369492686129885673129885941Ratregion
5500222AU0147481566118043889118044045Ratregion
5500224AI8529331206127596283127596403Ratregion
5500254SHGC-1524277966117503386117504182Ratregion
5500809stSG63208013896126835779126837168Ratregion
5500739G36215966127722669127722765Ratregion
5500811stSG6321299666126888831126889797Ratregion
5500591RH1361002086119497183119497391Ratregion
5501327ECD170614126126838523126838935Ratregion
5501524RH1163006129377069129377691Ratregion
5501079PMC133956P12626128523722128523984Ratregion
5504169UniSTS:2594495646128416706128417270Ratregion
5501924MARC_17493-17494:1030378000:116796124705608124707287Ratregion
5506157Gpr683436120137721120138064Ratregion
5506573TRAF3_15848926130301628130302520Ratregion
5502249AI5034111066124524968124525074Ratregion
Position Markers

Flank 1: (D6Rat119)
Rat AssemblyChrPosition (strand)Source
mRatBN7.26106,752,656 - 106,752,806 (+)MAPPER
Rnor_6.06111,134,524 - 111,134,673NCBI
Rnor_5.06120,420,333 - 120,420,482UniSTS
RGSC_v3.46111,239,280 - 111,239,429UniSTS
RGSC_v3.46111,239,053 - 111,239,430RGD
RGSC_v3.16111,242,584 - 111,242,961RGD
Celera6104,573,956 - 104,574,105UniSTS
RH 3.4 Map6748.99RGD
RH 3.4 Map6748.99UniSTS
RH 2.0 Map61001.2RGD
SHRSP x BN Map664.5898RGD
Flank 2: (D6Arb3)
Rat AssemblyChrPosition (strand)Source
mRatBN7.26132,339,579 - 132,339,866 (+)MAPPER
Rnor_6.06138,064,968 - 138,065,254NCBI
Rnor_5.06147,057,574 - 147,057,860UniSTS
RGSC_v3.46138,260,348 - 138,260,635RGD
RGSC_v3.46138,260,349 - 138,260,635UniSTS
RGSC_v3.16138,266,535 - 138,266,822RGD
Celera6129,870,923 - 129,871,209UniSTS
RH 3.4 Map6783.0UniSTS
RH 3.4 Map6783.0RGD
RH 2.0 Map61125.3RGD
SHRSP x BN Map683.0399RGD
Cytogenetic Map6q32UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
70196BpQTLcluster7Blood pressure QTL cluster 76.82arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)672202632117202632Rat
71111Iddm8Insulin dependent diabetes mellitus QTL 81.90.002blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)6105156861140994061Rat
724513Uae14Urinary albumin excretion QTL 146.5urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)685311061133478515Rat
724524Uae2Urinary albumin excretion QTL 22.70.0005urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)673463459109394713Rat
724536Uae7Urinary albumin excretion QTL 73.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)672202632130729475Rat
1331722Thshl1Thyroid stimulating hormone level QTL 111.70.0001blood thyroid-stimulating hormone amount (VT:0005119)serum thyroid stimulating hormone level (CMO:0001248)689762877106752806Rat
1331725Bp212Blood pressure QTL 2123.52475arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)693701310128713626Rat
737827Hcar11Hepatocarcinoma resistance QTL 114.4liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)682523650110548006Rat
1298087Iddm18Insulin dependent diabetes mellitus QTL 180.0001urine glucose amount (VT:0001758)percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)6116506292130245370Rat
737976Pia24Pristane induced arthritis QTL 24joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)6112636280140994061Rat
1331789Rf37Renal function QTL 373.224kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)672202632115200186Rat
1331797Bp213Blood pressure QTL 2133.291arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)6104085867128713626Rat
1331799Bp211Blood pressure QTL 2113.66407arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)672202632130919985Rat
1581550Pur8Proteinuria QTL 8total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)672227641130729205Rat
731173Uae22Urinary albumin excretion QTL 2210.1urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
738034Anxrr5Anxiety related response QTL 55.9exploratory behavior trait (VT:0010471)percentage of entries into a discrete space in an experimental apparatus (CMO:0000961)684130881129130881Rat
1641904Alcrsp4Alcohol response QTL 4response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)667262953112262953Rat
1641917Colcr5Colorectal carcinoma resistance QTL 53.180.0009intestine integrity trait (VT:0010554)benign colorectal tumor number (CMO:0001795)6122549046137801795Rat
1581563Uae33Urinary albumin excretion QTL 33urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)672227641130729205Rat
1576309Emca7Estrogen-induced mammary cancer QTL 74mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)615107216107351382Rat
2313399Anxrr28Anxiety related response QTL 28aggression-related behavior trait (VT:0015014)tameness/aggressiveness composite score (CMO:0002136)6100671796132340886Rat
1358355Srcrt4Stress Responsive Cort QTL 46.39blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)6100364669140994061Rat
1300075Glom7Glomerulus QTL 75.60.0000002kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)671201409116201409Rat
1300076Glom8Glomerulus QTL 870.000000009kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)686894788131894788Rat
2290393Uae37Urinary albumin excretion QTL 370.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)665531555140994061Rat
2312560Pur20Proteinuria QTL 202.10.005total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)6125628133137801795Rat
2303624Vencon5Ventilatory control QTL 54.45respiration trait (VT:0001943)minute ventilation (CMO:0000132)688047916133047916Rat
2293085Iddm29Insulin dependent diabetes mellitus QTL 297.66blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)6122549046140286318Rat
61329Eae9Experimental allergic encephalomyelitis QTL 93.7body mass (VT:0001259)change in body weight (CMO:0002045)6122549046140994061Rat
61414Pia3Pristane induced arthritis QTL 34.5joint integrity trait (VT:0010548)post-insult time to onset of experimental arthritis (CMO:0001450)694968928137848904Rat
8552796Vie3Viral induced encephalitis QTL 32.6brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)696833997140994061Rat
10054138Gmadr3Adrenal mass QTL 33.680.00045adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)685140138130140138Rat
10054123Srcrt6Stress Responsive Cort QTL 62.50.0043blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)685140138130140138Rat
4145118Mcs26Mammary carcinoma susceptibility QTL 260.0001mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)6106752656132339866Rat
4145119Mcs25Mammary carcinoma susceptibility QTL 250.0001mammary gland integrity trait (VT:0010552)ratio of deaths to total study population during a period of time (CMO:0001023)610894415110548006Rat
12801411Schws8Schwannoma susceptibility QTL 8nervous system integrity trait (VT:0010566)percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017)694968928139968928Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general this region controls tumor latency and multiplicity; does not contain DMBA toxicity QTL 4143380
qtl_general inducing agent: DMBA (65 mg/kg of body wt) 4143380
qtl_general animals used: 47-57 days old virgin females 4143380
qtl_map spans 27.1 Mbp and has 241 genes out of which 15% genes per Kbp are breast-cancer related 4143380