Mcs27 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Mcs27 (Mammary carcinoma susceptibility QTL 27) Rattus norvegicus

Symbol: Mcs27
Name: Mammary carcinoma susceptibility QTL 27
RGD ID: 4145117
Trait: mammary gland integrity trait   (VT:0010552)    
Measurement Type: post-insult time to mammary tumor formation   (CMO:0000345)    
LOD Score: Not Available
P Value: 1.0E-4
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21343,437,904 - 47,841,255RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01348,776,655 - 53,264,877RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01353,846,466 - 58,314,767RGDRnor5.0
RGSC_v3.41344,872,181 - 49,428,577RGDRGSC3.4
Cross Type: intercross
Strains Crossed: SS.BN-(D13Hmgc64-RN34_13048990782)/Mcwi 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
1. Adamovic T, et al., Genes Chromosomes Cancer. 2010 Nov;49(11):1035-45.
Related QTLs

Related QTL Description Reference
Mcs26 maps to same region RGD:4143380


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3862Timm17atranslocase of inner mitochondrial membrane 17A134673111746742604Rat
70983Cacna1scalcium voltage-gated channel subunit alpha1 S134749394947564194Rat
620055Ppfia4PTPRF interacting protein alpha 4134575382745802305Rat
3882Tnnt2troponin T2, cardiac type134726732547285390Rat
2048Adora1adenosine A1 receptor134565887245695821Rat
62053Csrp1cysteine and glycine-rich protein 1134715817147179388Rat
620287Mybphmyosin binding protein H134565315645660893Rat
727850Kiss1KiSS-1 metastasis-suppressor134477482344780707Rat
621123Ptprvprotein tyrosine phosphatase, receptor type, V134654812546569148Rat
628835Gpr37l1G protein-coupled receptor 37-like 1134659857446605421Rat
3804Syt2synaptotagmin 2134608804646197976Rat
3821Cntn2contactin 2134394286843975973Rat
708516Ptpn7protein tyrosine phosphatase, non-receptor type 7134657090446584048Rat
628717Klhl12kelch-like family member 12134589991345933648Rat
621137Rnpeparginyl aminopeptidase134669945846717829Rat
620432Myogmyogenin134574545545748044Rat
621765Tnni1troponin I1, slow skeletal type134722921747241640Rat
620911Nfascneurofascin134399722344183863Rat
1304916Optcopticin134535395445368254Rat
735051Dstykdual serine/threonine and tyrosine protein kinase134385726643905280Rat
621305Atp2b4ATPase plasma membrane Ca2+ transporting 4134515613745255292Rat
620874Chi3l1chitinase 3 like 1134564180245649787Rat
620226Prelpproline and arginine rich end leucine rich repeat protein134536840745391480Rat
1307236Lmod1leiomodin 1134675404846796186Rat
1305532Rbbp5RB binding protein 5, histone lysine methyltransferase complex subunit134391225443939107Rat
3554Renrenin134479626044807491Rat
1306084Cyb5r1cytochrome b5 reductase 1134584901745855458Rat
2225Btg2BTG anti-proliferation factor 2134553188145535642Rat
1305132Klhdc8akelch domain containing 8A134373570243744277Rat
1305646Chit1chitinase 1134556584145613593Rat
1306206Kif21bkinesin family member 21B134757614247626112Rat
1306541Pik3c2bphosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta134449467344555663Rat
1311611Gpr25G protein-coupled receptor 25134770969647715270Rat
1310504Elk4ETS transcription factor ELK4134345113043475035Rat
1359351Mgat4e-likeMgat4 family, member E-like134583745845843215Rat
1310950Camsap2calmodulin regulated spectrin-associated protein family, member 2134772312147802597Rat
1311960Tmcc2transmembrane and coiled-coil domain family 2134379402943831716Rat
1310816Ube2tubiquitin-conjugating enzyme E2T134640335246413854Rat
1312041Shisa4shisa family member 4134680048746803703Rat
1359167Nuak2NUAK family kinase 2134375345443770604Rat
1309306Mdm4MDM4 regulator of p53134443259644516165Rat
1309287Ppp1r12bprotein phosphatase 1, regulatory subunit 12B134619941846397108Rat
1305304Etnk2ethanolamine kinase 2134481122444829037Rat
1310687Elf3E74 like ETS transcription factor 3134669046046695394Rat
1308290Zc3h11azinc finger CCCH-type containing 11A134507342245113901Rat
1310652Lad1ladinin 1134724960547263967Rat
1305482Lrrn2leucine rich repeat neuronal 2134432194444382454Rat
1310537Ipo9importin 9134681046046862694Rat
1307922Tmem9transmembrane protein 9134745848647475832Rat
1307944Ppp1r15bprotein phosphatase 1, regulatory subunit 15B134457784044585737Rat
1309892Tmem183atransmembrane protein 183A134580364145820409Rat
1309674Sox13SRY-box transcription factor 13134483109744875522Rat
1309523Cdk18cyclin-dependent kinase 18134355559743582210Rat
1307472Pkp1plakophilin 1134730960347357551Rat
1303151Adipor1adiponectin receptor 1134585946145879248Rat
1565602Kdm5blysine demethylase 5B134600158946073868Rat
1565940Arl8aADP-ribosylation factor like GTPase 8A134658584546594851Rat
1561566LOC498231LRRGT00144134504849845067460Rat
1359331RabifRAB interacting factor134593637145948929Rat
1310502Phlda3pleckstrin homology-like domain, family A, member 3134719325047196335Rat
1561854Ascl5achaete-scute family bHLH transcription factor 5134749190047493346Rat
1308112Mgat4eMGAT4 family, member E134598297945991793Rat
1311892Inavainnate immunity activator134766644647687383Rat
1560339Lgr6leucine-rich repeat-containing G protein-coupled receptor 6134642438246544074Rat
1583292Ndufv3-ps1NADH dehydrogenase (ubiquinone) flavoprotein 3, pseudogene 1134591624045916673Rat
1563522Lax1lymphocyte transmembrane adaptor 1134513482545145381Rat
1566090Mfsd4amajor facilitator superfamily domain containing 4A134346948843510467Rat
1566310Golt1agolgi transport 1A134476035644773123Rat
1564395Plekha6pleckstrin homology domain containing A6134461474044754951Rat
1562634LOC498236LRRGT00186134763000447665376Rat
1565384Igfn1immunoglobulin-like and fibronectin type III domain containing 1134739561847427506Rat
1561544Tmem81transmembrane protein 81134393967743942108Rat
1590261Nav1neuron navigator 1134686697247119368Rat
1589074LOC685812similar to ribosomal protein L11134719397347207541Rat
1592636LOC685511similar to 40S ribosomal protein S7 (S8)134595072345951394Rat
619769Fmodfibromodulin134549351745504134Rat
2321675Snrpesmall nuclear ribonucleoprotein polypeptide E134505098645057231Rat
2322511LOC100360239hypothetical LOC100360239134419981544200394Rat
2325610Mir135bmicroRNA 135b134363885743638953Rat
7501983LOC102550525uncharacterized LOC102550525134480077244802578Rat
7514622LOC102557118uncharacterized LOC102557118134538044245384435Rat
7528970LOC102553722uncharacterized LOC102553722134711749947121805Rat
7633688LOC102552406uncharacterized LOC102552406134561360645636556Rat
9078385Lnc134long non-coding RNA 134134589496445899883Rat
9238526Zbed6zinc finger, BED-type containing 6134510748945113141Rat
9333559LOC10369192228S ribosomal protein L42, mitochondrial134764404047645622Rat
9461626LOC103692077uncharacterized LOC103692077134492825644937589Rat
11453213LOC108352533uncharacterized LOC108352533134511636845130742Rat
11377184LOC108352532uncharacterized LOC108352532134422058144222116Rat
11506008LOC108352536uncharacterized LOC108352536134706715547070010Rat
41278710NEWGENE_41155962transfer RNA lysine (anticodon UUU)134448230744482379Rat
41359476LOC120096190uncharacterized LOC120096190134584375445854407Rat
41145509LOC120096188uncharacterized LOC120096188134441333944418366Rat
41327582LOC120096255uncharacterized LOC120096255134696612146973821Rat
41177193LOC120096257uncharacterized LOC120096257134766902947676924Rat
41345153LOC120096248ethanolamine kinase 2-like134481453744829052Rat
41070118LOC120096220uncharacterized LOC120096220134768658347690468Rat
41159165LOC120096256uncharacterized LOC120096256134705190547054848Rat
41104579LOC120096251uncharacterized LOC120096251134550307245523082Rat
41401176NEWGENE_41155962transfer RNA lysine (anticodon UUU)134448191644481988Rat
41130351LOC120096253uncharacterized LOC120096253134676300046776339Rat
41351842LOC120096185uncharacterized LOC120096185134375416743760164Rat
40989265LOC120096252uncharacterized LOC120096252134658088246582653Rat
40967358LOC120096187uncharacterized LOC120096187134440754344411825Rat
40993431LOC120096406small nucleolar RNA SNORA17134425476144254882Rat
41075572LOC120096249NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-like134512119745122944Rat
41077524LOC120096186uncharacterized LOC120096186134420495044209708Rat
41245870LOC120096254uncharacterized LOC120096254134708947547097382Rat
41052885LOC120096191ubiquitin-conjugating enzyme E2 C-like134623456746243280Rat
41337984LOC120096250uncharacterized LOC120096250134513631545140254Rat
41226902LOC120096452U6 spliceosomal RNA134396455243964658Rat
41016284LOC120096189uncharacterized LOC120096189134575604045759682Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
11232D13Arb7317134480209344802410Ratregion
33935D13Mit8206134529565245295858Ratregion
11375D13Arb8194134619287246193066Ratregion
11433D13Mgh15338134728269847283224Ratregion
36069D13Rat23166134570337045703527Ratregion
37314D13Rat101162134784107547841255Ratregion
36884D13Rat25166134504940445049579Ratregion
35601D13Rat24165134718100747181172Ratregion
35925D13Rat41163134372077043720931Ratregion
38020D13Rat87159134363752843637697Ratregion
38240D13Rat91172134541775345417941Ratregion
40688D13Rat124236134522835845228590Ratregion
38840D13Rat105201134413959544139796Ratregion
41146D13Rat125235134549782145498068Ratregion
41346D13Rat123132134343790443438038Ratregion
42992D13Rat176216134653070646530915Ratregion
40948D13Rat120141134421114144211288Ratregion
45047D13Got25135134388554543885678Ratregion
45048D13Wox2147134516231245162453Ratregion
45051D13Got31253134687496646875219Ratregion
45052D13Got26186134527247045272654Ratregion
45053D13Got30231134613206046132301Ratregion
60759D13Wox3277134559344745593724Ratregion
60035D13Got23196134378125543781451Ratregion
60036D13Got24172134370909843709270Ratregion
60037D13Got28139134536284345363002Ratregion
60042D13Got37251134777850747778756Ratregion
66517D13Mco9270134602552746025790Ratregion
66668D13Mco10221134573893945739160Ratregion
1627537D13Sunn1090243134521437145214612Ratregion
1627537D13Sunn1090243134521437145214612Ratregion
1582092D13Hmgc24118134670608746706205Ratregion
1642080D13Hmgc62209134674000246740211Ratregion
1642153D13Hmgc03237134568907745689314Ratregion
1642155D13Hmgc90200134462456844624768Ratregion
1642155D13Hmgc90200134462450544624768Ratregion
1642157D13Hmgc58165134384988043850045Ratregion
1642159D13Hmgc64196134376375243763948Ratregion
1642161D13Hmgc30205134569998345700190Ratregion
1642163D13Hmgc84254134463918244639436Ratregion
1642165D13Hmgc41223134383007543830298Ratregion
1632942D13Wox16240134722778347228023Ratregion
5035825PMC207566P7210134574528245745492Ratregion
5037209UniSTS:205458273134574564945745922Ratregion
5037217RH127096243134575550445755747Ratregion
5028699RH7104077134752737247527449Ratregion
5026150RH131106180134728449447285225Ratregion
5028807RH142402199134669090346691102Ratregion
5028931RH142867105134346173043461835Ratregion
5034355SHGC-76196150134515803245158182Ratregion
5034371RH64613118134643924346439361Ratregion
5026508RH132481192134756373747563929Ratregion
5026594RH132810188134594946745949655Ratregion
5034634BF390479197134389675843896955Ratregion
5029377RH144564156134515647945156634Ratregion
5026796RH133563201134458542244585623Ratregion
5035068STS-M6202185134388712343887208Ratregion
5027131RH16184119134587844845878567Ratregion
5029969BF400237181134671013046710311Ratregion
5032823RH135433197134679461846794815Ratregion
5030403BE112734174134658313246583306Ratregion
5025302RH127798217134443273044432947Ratregion
502795341.MMHAP33FRF11.seq178134654467946544857Ratregion
5030715BE107718154134525472545254879Ratregion
5028204D1Mit103102134742887747428977Ratregion
5033599RH139414122134594848845948610Ratregion
5028384AI448359217134575544645755663Ratregion
5051286RH134546185134475472644754911Ratregion
5051623BB17643199134566191445662013Ratregion
5056937RH144666163134400186744002030Ratregion
5051791RH94660135134717863947178775Ratregion
5057438AW254008131134394189943942030Ratregion
5057458AA858656200134587874245878942Ratregion
5054505RH143263233134727554947275782Ratregion
5054559RH143294224134679976046799984Ratregion
5057716BF392626106134469463944694745Ratregion
5057996BF386425150134620830946208459Ratregion
5055845RH144035137134672798546728122Ratregion
5058122BF386633197134670363946703836Ratregion
5058138BF386676175134600035946000534Ratregion
5058162BF386712150134433123844331388Ratregion
5053031RH142414209134724138247241591Ratregion
5053045RH142422219134395954843960824Ratregion
5053087RH142446178134550370245503880Ratregion
5059208AI137140102134443627444436376Ratregion
5050744RH134233216134507186145072077Ratregion
7192896Myog185134574548845745673Ratregion
5054163RH143066157134523453845234695Ratregion
5052929RH142356151134564955845649709Ratregion
5052959RH142373166134438222344382389Ratregion
5053003RH142398167134374009543740374Ratregion
5051138RH134461195134772327347723468Ratregion
5054389RH143196156134469727144697427Ratregion
5050476RH134078193134347991743480110Ratregion
5040728RH128449192134566005545660750Ratregion
5041196RH128717180134726999447270174Ratregion
5045226RH131056182134641349946413681Ratregion
5041338RH128800210134513487445135084Ratregion
5046126RH131573154134762591547626069Ratregion
5047580RH132409183134383691743837100Ratregion
5045968RH131483205134369753043697735Ratregion
5046262RH131651182134347449843474680Ratregion
5049044RH133254214134719607947196293Ratregion
5049170RH133325206134724029747241401Ratregion
5049302RH133402188134550376545503953Ratregion
5047936RH132614187134399732143997508Ratregion
5046860RH131996213134565897445659187Ratregion
5046874RH132004187134536845745368644Ratregion
5047038RH132098180134642447246424652Ratregion
5048280RH132812205134607351546073720Ratregion
5039582RH127788184134673120546731389Ratregion
5039782RH127904220134377017043770390Ratregion
5042284RH129346228134717908047179308Ratregion
5040028RH128048217134764433647644553Ratregion
5040296RH128202212134482872744828939Ratregion
5039688RH127850216134717898547179201Ratregion
5039966RH128011215134747546847475683Ratregion
5042492RH129466214134393884943939063Ratregion
5042524RH129486184134591625745916441Ratregion
5042524RH129486184134591625745916441Ratregion
7192892Myog114134574789945748013Ratregion
5043198RH129888197134591629145916488Ratregion
5075090RH138392176134480724144807417Ratregion
5076324RH139109196134346165943461855Ratregion
5074618RH138120135134642964046429775Ratregion
5076922RH139456221134681000746810228Ratregion
5080632RH141692199134726371947263918Ratregion
5080680RH141720211134475249544752706Ratregion
5075048RH138368172134638401046384182Ratregion
5075070RH138381243134766650147666744Ratregion
5077176RH139606220134680990146810121Ratregion
5080118RH141393218134355564543555863Ratregion
5070856RH134745186134672901546729201Ratregion
5073820RH137657152134432697944327131Ratregion
5070610RH134601206134686722446867430Ratregion
5072996RH137174187134659451846594705Ratregion
5073082RH137226207134593330545933512Ratregion
5073908RH137708167134390336343903530Ratregion
5071900RH135350196134658895846589154Ratregion
5073556RH137504226134724138647241612Ratregion
5074530RH138070130134767519947675329Ratregion
5064976BI302954171134543307945433250Ratregion
5065038BE108977156134484974144849897Ratregion
5067006AU048021295134635069546350988Ratregion
5067316AU047830217134759822447598446Ratregion
5068750AU046955113134594579645945907Ratregion
5070161RH94507185134479589244796082Ratregion
5069278AU046603186134367863643678822Ratregion
5065424BF412011190134679671946796909Ratregion
5062830AW528446144134394733043947474Ratregion
5064196BI296337241134554087645541117Ratregion
5065270BE121320160134658494546585105Ratregion
5060506BE110239199134609577446095973Ratregion
5062384BE106626190134564394245644132Ratregion
5064182BE120749197134511202545112222Ratregion
5066082BE116762150134447105744471207Ratregion
5066266PMC130177P2402134717895747179359Ratregion
5064776BF405092167134580130445801471Ratregion
5087006BF389061157134773003147730188Ratregion
5087297AA819837150134553378245533932Ratregion
5082631BE119883200134471522644715426Ratregion
5087241BE117324163134435779344357956Ratregion
5087686UniSTS:141040179134566266045662839Ratregion
5082885BF390334150134739567147395821Ratregion
5083047BI281641110134394518943945299Ratregion
5083051BF390705180134433747144337651Ratregion
5081491AA998833156134477295144773108Ratregion
5081909BE118735193134565899445659187Ratregion
5085112AW531798205134561335645613561Ratregion
5085934AA866326212134669060446690816Ratregion
5080850RH141819220134420686444207054Ratregion
5084686AI23623191134585536445855455Ratregion
5082991BF390593171134625661846256789Ratregion
5086388BQ204841157134641458146414738Ratregion
5085836BE104220171134394293543943106Ratregion
5503554UniSTS:463953674134574590345746577Ratregion
5505159Lrrn2892134437982544380717Ratregion
5506793G45403176134531345545313631Ratregion
5499719UniSTS:234220327134574552345745850Ratregion
5500063UniSTS:236515198134393765243937850Ratregion
5500661RH136499209134673128746731496Ratregion
5501077PMC133893P1952134574562845746580Ratregion
5501223PMC156147P1293134553392045534013Ratregion
5501071PMC133870P1417134549623845496655Ratregion
5502819TNNI1208134723932847240318Ratregion
6480500D13Hmgc56200134564255045642750Ratregion
6480492D13Hmgc10178134551471945514897Ratregion
128794684110178134551471945514897Ratregion
Position Markers

Flank 1: (D13Rat123)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21343,437,904 - 43,438,038 (+)MAPPER
Rnor_6.01348,776,655 - 48,776,788NCBI
Rnor_5.01353,846,466 - 53,846,599UniSTS
RGSC_v3.41344,872,182 - 44,872,315UniSTS
RGSC_v3.41344,872,181 - 44,872,315RGD
RGSC_v3.11344,886,225 - 44,886,358RGD
Celera1343,774,561 - 43,774,698UniSTS
RH 3.4 Map13112.8RGD
RH 3.4 Map13112.8UniSTS
RH 2.0 Map13330.6RGD
SHRSP x BN Map1311.3299RGD
Flank 2: (D13Rat101)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21347,841,075 - 47,841,255 (+)MAPPER
Rnor_6.01353,264,698 - 53,264,877NCBI
Rnor_5.01358,314,588 - 58,314,767UniSTS
RGSC_v3.41349,428,397 - 49,428,577RGD
RGSC_v3.41349,428,398 - 49,428,577UniSTS
RGSC_v3.11349,442,478 - 49,442,657RGD
Celera1348,152,996 - 48,153,175UniSTS
RH 3.4 Map13148.8UniSTS
RH 3.4 Map13148.8RGD
FHH x ACI Map1319.33UniSTS
FHH x ACI Map1319.33RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)131101056920Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)131101056920Rat
1354666Bp244Blood pressure QTL 2444.9arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131101056920Rat
61339Bp24Blood pressure QTL 240.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)13599466844807491Rat
1581554Pur11Proteinuria QTL 11urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13599483377046787Rat
1581573Uae36Urinary albumin excretion QTL 36urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)13599483377046787Rat
1581570Eae17Experimental allergic encephalomyelitis QTL 174.1nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)138897350101631289Rat
7411662Foco29Food consumption QTL 2920.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)13931346554313465Rat
9589141Insul28Insulin level QTL 2810.820.001blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)13931346554313465Rat
2317040Aia21Adjuvant induced arthritis QTL 212.75joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)13983154154831541Rat
2317046Aia8Adjuvant induced arthritis QTL 83.9700000286102295joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)13983154154831541Rat
1300163Cardf1Cardiac cell morphology QTL 14.18aorta morphology trait (VT:0000272)artery lesion measurement (CMO:0000975)131192944945417941Rat
2302275Gluco37Glucose level QTL 373.8blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)131192944946193066Rat
631645Bp121Blood pressure QTL 1213.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)131491565559915655Rat
9589164Gluco66Glucose level QTL 666.670.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)131515872260158722Rat
1331784Bp222Blood pressure QTL 2222.944arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)131769443653050594Rat
7207885Glom27Glomerulus QTL 273.9kidney glomerulus integrity trait (VT:0010546)kidney crescentic glomeruli count to kidney normal glomeruli count ratio (CMO:0002139)1320605871101339738Rat
61391Bp5Blood pressure QTL 55.6arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)132230187567301875Rat
70170Eae14Experimental allergic encephalomyelitis QTL 140.0024nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046)132320344868203448Rat
6893338Cm76Cardiac mass QTL 7600.99heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)132369296968692969Rat
1558644Cm45Cardiac mass QTL 453.60.002heart mass (VT:0007028)heart wet weight (CMO:0000069)132369296968692969Rat
1354621Rf47Renal function QTL 473.7kidney renin amount (VT:0010559)kidney renin level (CMO:0002166)1330395351101056920Rat
2301962Cm72Cardiac mass QTL 724.12heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)133124133158363171Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133124133193395974Rat
70181BpQTLcluster11Blood pressure QTL cluster 116.922arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)133124133193395974Rat
2303563Bw89Body weight QTL 896body mass (VT:0001259)body weight (CMO:0000012)133228447177284471Rat
61340Bp25Blood pressure QTL 254.20.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133453521879535218Rat
12879477Bp401Blood pressure QTL 401arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)133726209282262092Rat
61349Bp31Blood pressure QTL 315.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133737450982374509Rat
70220Bp55Blood pressure QTL 555.75arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)133737450982374509Rat
4889861Pur29Proteinuria QTL 2913.80.005total urine protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)133741558480753406Rat
1331750Bp220Blood pressure QTL 2202.98arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)133741558482415584Rat
1549897Stresp12Stress response QTL 123.35stress-related behavior trait (VT:0010451)number of approaches toward negative stimulus before onset of defensive burying response (CMO:0001960)133843340883433408Rat
619615Bp80Blood pressure QTL 800.0354arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)133975454484754544Rat
2303032Bp328Blood pressure QTL 328arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134118402245417941Rat
4145117Mcs27Mammary carcinoma susceptibility QTL 270.0001mammary gland integrity trait (VT:0010552)post-insult time to mammary tumor formation (CMO:0000345)134343790447841255Rat
6893344Cm79Cardiac mass QTL 791.50.04heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)134372077062022792Rat
12879436Bp395Blood pressure QTL 395arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134463918245700190Rat
12879444Bp397Blood pressure QTL 397arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134504940490049404Rat
12879472Bp399Blood pressure QTL 399arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134522835847841255Rat
12879471Bp398Blood pressure QTL 398arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134551471990514719Rat
12879441Bp396Blood pressure QTL 396arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)134569998390699983Rat
1298066Bp159Blood pressure QTL 1590.004arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)134608804691088046Rat
71119Thym2Thymus enlargement QTL 23.8thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)134619797684753113Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general animals used: 47-57 days old virgin females 4143380
qtl_general inducing agent: DMBA (65 mg/kg of body wt) 4143380
qtl_map spans 4.5 Mbp and has 85 genes out of which 8% genes per Kbp are breast-cancer related 4143380