GWAS932704_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS932704_H (skin hydration measurement QTL GWAS932704 (human)) Homo sapiens

Symbol: GWAS932704_H
Name: skin hydration measurement QTL GWAS932704 (human)
RGD ID: 407283728
Trait: skin hydration measurement
Measurement Type: skin water level   (CMO:0002766)    
LOD Score: Not Available
P Value: 2.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh386150,550,183 - 150,550,184RGD_MAPPER_PIPELINEGRCh38
GRCh376150,871,319 - 150,871,320RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS932704_HHumanskin water level  IAGPrs9398017405850206 GWAS_CATALOGPMID:35313536

Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Position Markers

Peak: (rs9398017)
Human AssemblyChrPosition (strand)Source
GRCh386150,550,183 - 150,550,184RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407283728GWAS932704_Hskin hydration measurement QTL GWAS932704 (human)0.000002skin hydration measurementskin water level (CMO:0002766)6150550183150550184Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS932704_H GCST90104592 Facial skin hydration 730 Korean ancestry individuals T NR 0.000002 5.699 rs9398017 4.624 skin hydration measurement (EFO:0009586)
 PMID:35313536
Database Acc Id Source(s)
GWAS Catalog GCST90104592 GWAS Catalog

RGD Curation Notes
Note Type Note Reference