GWAS794463_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS794463_H (mean arterial pressure, response to high sodium diet, response to dietary potassium supplementation QTL GWAS794463 (human)) Homo sapiens

Symbol: GWAS794463_H
Name: mean arterial pressure, response to high sodium diet, response to dietary potassium supplementation QTL GWAS794463 (human)
RGD ID: 407145487
Trait: mean arterial pressure, response to high sodium diet, response to dietary potassium supplementation
Measurement Type: mean arterial blood pressure   (CMO:0000009)    
LOD Score: Not Available
P Value: 1.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh382234,394,166 - 234,394,167RGD_MAPPER_PIPELINEGRCh38
GRCh372235,302,810 - 235,302,811RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Position Markers

Peak: (rs11887188)
Human AssemblyChrPosition (strand)Source
GRCh382234,394,166 - 234,394,167RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2289332BW376_HBody weight QTL 376 (human)1.870.00168Body fat amountabdominal2213765566239765566Human
407145487GWAS794463_Hmean arterial pressure, response to high sodium diet, response to dietary potassium supplementation QTL GWAS794463 (human)0.000001mean arterial pressure, response to high sodium diet, response to dietary potassium supplementationmean arterial blood pressure (CMO:0000009)2234394166234394167Human
407145247GWAS794223_Hdiastolic blood pressure, response to high sodium diet, response to dietary potassium supplementation QTL GWAS794223 (human)2e-08diastolic blood pressure, response to high sodium diet, response to dietary potassium supplementationdiastolic blood pressure (CMO:0000005)2234394166234394167Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS794223_H GCST002252 Blood pressure measurement (high sodium and potassium intervention) 1,836 Han Chinese ancestry individuals T 0.03 2E-8 7.699 rs11887188 3.28 diastolic blood pressure (EFO:0006336)
response to high sodium diet (EFO:0005401)
response to dietary potassium supplementation (EFO:0005403)
 PMID:24165912
GWAS794463_H GCST002252 Blood pressure measurement (high sodium and potassium intervention) 1,836 Han Chinese ancestry individuals T 0.03 0.000001 6 rs11887188 2.98 mean arterial pressure (EFO:0006340)
response to high sodium diet (EFO:0005401)
response to dietary potassium supplementation (EFO:0005403)
 PMID:24165912
Database Acc Id Source(s)
GWAS Catalog GCST002252 GWAS Catalog

RGD Curation Notes
Note Type Note Reference