GWAS772464_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL: GWAS772464_H (quinolinic acid measurement QTL GWAS772464 (human)) Homo sapiens

Symbol: GWAS772464_H
Name: quinolinic acid measurement QTL GWAS772464 (human)
RGD ID: 407123488
Trait: quinolinic acid measurement
LOD Score: Not Available
P Value: 4.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh38122,188,539 - 22,188,540RGD_MAPPER_PIPELINEGRCh38
GRCh37122,515,032 - 22,515,033RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS772464_HHumanquinolinic acid measurement  IAGPrs4654786405850206 GWAS_CATALOGPMID:23823483
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Position Markers

Peak: (rs4654786)
Human AssemblyChrPosition (strand)Source
GRCh38122,188,539 - 22,188,540RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1298451OSTEAR17_HOsteoarthritis QTL 17 (human)2.40.0004Joint/bone inflammationosteoarthritis11125188105Human
1576329MYI9_HMyocardial infarction susceptibility QTL 9 (human)12Myocardial infarction susceptibilityearly-onset1758550333585503Human
407123488GWAS772464_Hquinolinic acid measurement QTL GWAS772464 (human)0.000004quinolinic acid measurement12218853922188540Human
1298463BP9_HBlood pressure QTL 9 (human)3.9Blood pressurehypertension susceptibility1125188105Human
1576325MYI1_HMyocardial infarction susceptibility QTL 1 (human)11.681e-12Myocardial infarction susceptibilityearly-onset1758550333585503Human
1643380BW316_HBody weight QTL 316 (human)2.620.0002Body weightBMI1758550333585503Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS772464_H GCST009391 Metabolite levels 2,076 European ancestry individuals ? NR 0.000004 5.398 rs4654786 0.18923521 quinolinic acid measurement (EFO:0010528)
PMID:23823483
Database Acc Id Source(s)
GWAS Catalog GCST009391 GWAS Catalog

RGD Curation Notes
Note Type Note Reference