GWAS739624_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS739624_H (collagenous colitis QTL GWAS739624 (human)) Homo sapiens

Symbol: GWAS739624_H
Name: collagenous colitis QTL GWAS739624 (human)
RGD ID: 407090648
Trait: collagenous colitis
LOD Score: Not Available
P Value: 2.0E-32
Variance: Not Available
Position No map positions available.
Population Stats: Not Available



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
Colitis  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Position Markers

Peak: (rs2844531) No map positions available.


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS739624_H GCST90204145 Collagenous colitis 1,498 European ancestry cases, 13,487 European ancestry controls G 0.119 2E-32 31.699 rs2844531 2.0 collagenous colitis (EFO:1001293)
 PMID:37768647
GWAS784667_H GCST008995 Waist-to-hip ratio adjusted for BMI 315,284 European ancestry male individuals A 0.8585 1E-30 30 rs2844531 0.0294 BMI-adjusted waist-hip ratio (EFO:0007788)
 PMID:30239722
GWAS867521_H GCST90315122 ICAM3/NOTCH1 protein level ratio 43,509 European ancestry individuals ? NR 3E-120 119.523 rs2844531 0.224316 blood protein measurement (EFO:0007937)
 PMID:38412862
Database Acc Id Source(s)
GWAS Catalog GCST90204145 GWAS Catalog

RGD Curation Notes
Note Type Note Reference