GWAS699460_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL: GWAS699460_H (kynurenic acid measurement QTL GWAS699460 (human)) Homo sapiens

Symbol: GWAS699460_H
Name: kynurenic acid measurement QTL GWAS699460 (human)
RGD ID: 407050484
Trait: kynurenic acid measurement
LOD Score: Not Available
P Value: 9.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381013,288,395 - 13,288,396RGD_MAPPER_PIPELINEGRCh38
GRCh371013,330,395 - 13,330,396RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS699460_HHumankynurenic acid measurement  IAGPrs7901902405850206 GWAS_CATALOGPMID:23823483
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
731796PHYHphytanoyl-CoA 2-hydroxylase101327779913300064Human

Position Markers

Peak: (rs7901902)
Human AssemblyChrPosition (strand)Source
GRCh381013,288,395 - 13,288,396RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407050484GWAS699460_Hkynurenic acid measurement QTL GWAS699460 (human)0.000009kynurenic acid measurement101328839513288396Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS699460_H GCST009391 Metabolite levels 2,076 European ancestry individuals ? NR 0.000009 5.046 rs7901902 1.353253 kynurenic acid measurement (EFO:0010506)
PMID:23823483
Database Acc Id Source(s)
GWAS Catalog GCST009391 GWAS Catalog

RGD Curation Notes
Note Type Note Reference