GWAS699456_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL: GWAS699456_H (kynurenic acid measurement QTL GWAS699456 (human)) Homo sapiens

Symbol: GWAS699456_H
Name: kynurenic acid measurement QTL GWAS699456 (human)
RGD ID: 407050480
Trait: kynurenic acid measurement
LOD Score: Not Available
P Value: 6.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3810123,169,755 - 123,169,756RGD_MAPPER_PIPELINEGRCh38
GRCh3710124,929,271 - 124,929,272RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS699456_HHumankynurenic acid measurement  IAGPrs10794599405850206 GWAS_CATALOGPMID:23823483
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1315390BUB3BUB3 mitotic checkpoint protein10123154402123170467Human

Position Markers

Peak: (rs10794599)
Human AssemblyChrPosition (strand)Source
GRCh3810123,169,755 - 123,169,756RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407050480GWAS699456_Hkynurenic acid measurement QTL GWAS699456 (human)0.000006kynurenic acid measurement10123169755123169756Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS699456_H GCST009391 Metabolite levels 2,076 European ancestry individuals ? NR 0.000006 5.222 rs10794599 0.21346079 kynurenic acid measurement (EFO:0010506)
PMID:23823483
Database Acc Id Source(s)
GWAS Catalog GCST009391 GWAS Catalog

RGD Curation Notes
Note Type Note Reference