GWAS699067_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL: GWAS699067_H (adipic acid mesurement QTL GWAS699067 (human)) Homo sapiens

Symbol: GWAS699067_H
Name: adipic acid mesurement QTL GWAS699067 (human)
RGD ID: 407050091
Trait: adipic acid mesurement
LOD Score: Not Available
P Value: 5.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh383197,016,259 - 197,016,260RGD_MAPPER_PIPELINEGRCh38
GRCh373196,743,130 - 196,743,131RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS699067_HHumanadipic acid measurement  IAGPrs6779362405850206 GWAS_CATALOGPMID:23823483
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
1317764MELTFmelanotransferrin3197001740197029817Human

Position Markers

Peak: (rs6779362)
Human AssemblyChrPosition (strand)Source
GRCh383197,016,259 - 197,016,260RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407050091GWAS699067_Hadipic acid mesurement QTL GWAS699067 (human)0.000005adipic acid mesurement3197016259197016260Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS699067_H GCST009391 Metabolite levels 2,076 European ancestry individuals ? NR 0.000005 5.302 rs6779362 0.22572109 adipic acid measurement (EFO:0010455)
PMID:23823483
Database Acc Id Source(s)
GWAS Catalog GCST009391 GWAS Catalog

RGD Curation Notes
Note Type Note Reference