GWAS643974_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL: GWAS643974_H (quinolinic acid measurement QTL GWAS643974 (human)) Homo sapiens

Symbol: GWAS643974_H
Name: quinolinic acid measurement QTL GWAS643974 (human)
RGD ID: 406994998
Trait: quinolinic acid measurement
LOD Score: Not Available
P Value: 5.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381191,758,761 - 191,758,762RGD_MAPPER_PIPELINEGRCh38
GRCh371191,727,891 - 191,727,892RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS643974_HHumanquinolinic acid measurement  IAGPrs16833751405850206 GWAS_CATALOGPMID:23823483
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
14400278LINC02770long intergenic non-protein coding RNA 27701191732686192011260Human

Position Markers

Peak: (rs16833751)
Human AssemblyChrPosition (strand)Source
GRCh381191,758,761 - 191,758,762RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
406994998GWAS643974_Hquinolinic acid measurement QTL GWAS643974 (human)0.000005quinolinic acid measurement1191758761191758762Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS643974_H GCST009391 Metabolite levels 2,076 European ancestry individuals ? NR 0.000005 5.302 rs16833751 1.2886862 quinolinic acid measurement (EFO:0010528)
PMID:23823483
Database Acc Id Source(s)
GWAS Catalog GCST009391 GWAS Catalog

RGD Curation Notes
Note Type Note Reference