GWAS625995_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS625995_H (suberic acid measurement QTL GWAS625995 (human)) Homo sapiens

Symbol: GWAS625995_H
Name: suberic acid measurement QTL GWAS625995 (human)
RGD ID: 406977019
Trait: suberic acid measurement
LOD Score: Not Available
P Value: 4.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3810131,614,647 - 131,614,648RGD_MAPPER_PIPELINEGRCh38
GRCh3710133,446,983 - 133,446,984RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS625995_HHumansuberic acid measurement  IAGPrs7071489405850206 GWAS_CATALOGPMID:23823483
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Position Markers

Peak: (rs7071489)
Human AssemblyChrPosition (strand)Source
GRCh3810131,614,647 - 131,614,648RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
406977019GWAS625995_Hsuberic acid measurement QTL GWAS625995 (human)0.000004suberic acid measurement10131614647131614648Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS625995_H GCST009391 Metabolite levels 2,076 European ancestry individuals ? NR 0.000004 5.398 rs7071489 0.29580685 suberic acid measurement (EFO:0010534)
 PMID:23823483
Database Acc Id Source(s)
GWAS Catalog GCST009391 GWAS Catalog

RGD Curation Notes
Note Type Note Reference