GWAS624171_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL: GWAS624171_H (suberic acid measurement QTL GWAS624171 (human)) Homo sapiens

Symbol: GWAS624171_H
Name: suberic acid measurement QTL GWAS624171 (human)
RGD ID: 406975195
Trait: suberic acid measurement
LOD Score: Not Available
P Value: 4.0E-6
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh381497,059,538 - 97,059,539RGD_MAPPER_PIPELINEGRCh38
GRCh371497,525,875 - 97,525,876RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS624171_HHumansuberic acid measurement  IAGPrs13379080405850206 GWAS_CATALOGPMID:23823483
References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Position Markers

Peak: (rs13379080)
Human AssemblyChrPosition (strand)Source
GRCh381497,059,538 - 97,059,539RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
406975195GWAS624171_Hsuberic acid measurement QTL GWAS624171 (human)0.000004suberic acid measurement149705953897059539Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS624171_H GCST009391 Metabolite levels 2,076 European ancestry individuals ? NR 0.000004 5.398 rs13379080 0.2926464 suberic acid measurement (EFO:0010534)
PMID:23823483
Database Acc Id Source(s)
GWAS Catalog GCST009391 GWAS Catalog

RGD Curation Notes
Note Type Note Reference