GWAS609886_H QTL Report (Homo sapiens) - Rat Genome Database

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QTL Registration

QTL: GWAS609886_H (adrenomedullin measurement QTL GWAS609886 (human)) Homo sapiens

Symbol: GWAS609886_H
Name: adrenomedullin measurement QTL GWAS609886 (human)
RGD ID: 406960910
Trait: kidney adrenomedullin amount   (VT:0010754)    
Measurement Type: kidney adrenomedullin level   (CMO:0002916)    
LOD Score: Not Available
P Value: 2.0E-13
Variance: Not Available
Position
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh383165,989,738 - 165,989,739RGD_MAPPER_PIPELINEGRCh38
GRCh373165,707,526 - 165,707,527RGD_MAPPER_PIPELINEGRCh37
Population Stats: Not Available
JBrowse: View Region in Genome Browser (JBrowse)
Model



Experimental Data Annotations    Click to see Annotation Detail View

Clinical Measurement
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS609886_HHumankidney adrenomedullin level  IAGPrs141748118405850206 GWAS_CATALOGPMID:34648354

Vertebrate Trait
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS609886_HHumankidney adrenomedullin amount  IAGPrs141748118405850206 GWAS_CATALOGPMID:34648354

Experimental Factor Annotations    Click to see Annotation Detail View
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
GWAS609886_HHumanadrenomedullin measurement  IAGPrs141748118405850206 GWAS_CATALOGPMID:34648354
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Vertebrate Trait

References

References - curated
# Reference Title Reference Citation
1. RGD GWAS Catalog Import Pipeline RGD pipeline to import data from GWAS Catalog and create human variant and QTL records

Region

Position Markers

Peak: (rs141748118)
Human AssemblyChrPosition (strand)Source
GRCh383165,989,738 - 165,989,739RGD_MAPPER_PIPELINE


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
406947220GWAS596196_Hprotein measurement QTL GWAS596196 (human)7e-14protein measurement3165989738165989739Human
406948231GWAS597207_Hmitochondrial import inner membrane translocase subunit tim14 measurement QTL GWAS597207 (human)3e-12mitochondrial import inner membrane translocase subunit tim14 measurement3165989738165989739Human
406955416GWAS604392_Harginine/serine-rich protein 1 measurement QTL GWAS604392 (human)1e-13arginine/serine-rich protein 1 measurement3165989738165989739Human
406966461GWAS615437_Hprotein measurement QTL GWAS615437 (human)3e-14protein measurement3165989738165989739Human
406960910GWAS609886_Hadrenomedullin measurement QTL GWAS609886 (human)2e-13kidney adrenomedullin amount (VT:0010754)kidney adrenomedullin level (CMO:0002916)3165989738165989739Human


Additional Information

GWAS QTLs Related by Peak Marker
Data has come from the GWAS Catalog   
The highlighted row represents the current QTL
QTL GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG Peak Marker Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GWAS596196_H GCST90248482 Myosin regulatory light chain 2, atrial isoform levels 10,708 European ancestry individuals ? 0.28 7E-14 13.155 rs141748118 0.114 protein measurement (EFO:0004747)
 PMID:34648354
GWAS597207_H GCST90249877 Mitochondrial import inner membrane translocase subunit TIM14 levels 10,708 European ancestry individuals ? 0.28 3E-12 11.523 rs141748118 0.098 mitochondrial import inner membrane translocase subunit tim14 measurement (EFO:0020573)
 PMID:34648354
GWAS604392_H GCST90246605 Arginine/serine-rich protein 1 levels 10,708 European ancestry individuals ? 0.28 1E-13 13 rs141748118 0.112 arginine/serine-rich protein 1 measurement (EFO:0802286)
 PMID:34648354
GWAS609886_H GCST90246444 Adrenomedullin levels 10,708 European ancestry individuals ? 0.28 2E-13 12.699 rs141748118 0.108 adrenomedullin measurement (EFO:0010909)
 PMID:34648354
GWAS615437_H GCST90249364 DNA-directed RNA polymerase III subunit RPC6 levels 10,708 European ancestry individuals ? 0.28 3E-14 13.523 rs141748118 0.114 protein measurement (EFO:0004747)
 PMID:34648354
Database Acc Id Source(s)
GWAS Catalog GCST90246444 GWAS Catalog

RGD Curation Notes
Note Type Note Reference