Eae31 QTL Report (Rattus norvegicus) - Rat Genome Database

Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
QTL Registration

QTL: Eae31 (Experimental allergic encephalomyelitis QTL 31) Rattus norvegicus

Symbol: Eae31
Name: Experimental allergic encephalomyelitis QTL 31
RGD ID: 2325725
Trait: nervous system integrity trait   (VT:0010566)    
Measurement Type: experimental autoimmune encephalomyelitis severity score   (CMO:0001419)    
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21178,810,256 - 188,377,506RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01193,968,438 - 205,603,226RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01201,022,827 - 212,591,221RGDRnor5.0
RGSC_v3.41183,163,129 - 193,070,197RGDRGSC3.4
Cross Type: intercross
Strains Crossed: Kini:DA,PVG-G10 Kini:DA,PVG-G12 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Candidate Gene Status
Il4r is a candidate Gene for Eae31
Il21r is a candidate Gene for Eae31

Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
# Reference Title Reference Citation
1. RGMA and IL21R show association with experimental inflammation and multiple sclerosis. Nohra R, etal., Genes Immun. 2010 Jan 14.
2. RGMA and IL21R show association with experimental inflammation and multiple sclerosis. Nohra R, etal., Genes Immun. 2010 Jun;11(4):279-93. Epub 2010 Jan 14.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
619973Prss8serine protease 81182536229182540745Rat
71075Itgadintegrin subunit alpha D1182759785182788422Rat
619771Cuzd1CUB and zona pellucida-like domains 11186089422186130536Rat
2089Aldoaaldolase, fructose-bisphosphate A1181402275181407476Rat
3118Mt1-ps1metallothionein 1, pseudogene 11181132896181133270Rat
61984Dmbt1deleted in malignant brain tumors 11185617469185696476Rat
2899Il4rinterleukin 4 receptor1180115061180139981Rat
3046Mapk3mitogen activated protein kinase 31181366646181372863Rat
3750Spnsialophorin1181746937181759564Rat
3784Stx1bsyntaxin 1B1182415544182434385Rat
2013Acadsbacyl-CoA dehydrogenase, short/branched chain1186188939186227796Rat
2926Itgamintegrin subunit alpha M1182659047182709495Rat
69363Nupr1nuclear protein 1, transcriptional regulator1181213292181215327Rat
2442Ctf1cardiotrophin 11182328035182336346Rat
621019Stx4syntaxin 41182451108182459701Rat
628713Sbk1SH3 domain binding kinase 11180807092180851910Rat
621225Ppp4cprotein phosphatase 4, catalytic subunit1181392899181399703Rat
631424Itgalintegrin subunit alpha L1181918183181955735Rat
2385Cox6a2cytochrome c oxidase subunit 6A21182788528182790746Rat
621293Atp2a1ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 11181026606181044859Rat
628638Rnf40ring finger protein 401182202475182217899Rat
621416Rabep2rabaptin, RAB GTPase binding effector protein 21181010305181026651Rat
620217Slc5a2solute carrier family 5 member 21182847185182853309Rat
628696Zfp689zinc finger protein 6891182065885182074343Rat
628727Hsd3b7hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 71182411836182415447Rat
620933Dctpp1dCTP pyrophosphatase 11181877440181880833Rat
620173Tgfb1i1transforming growth factor beta 1 induced transcript 11182828553182835465Rat
620132Sh2b1SH2B adaptor protein 11181048622181057036Rat
620576CdiptCDP-diacylglycerol--inositol 3-phosphatidyltransferase1181583098181587409Rat
621590Taok2TAO kinase 21181475708181494738Rat
620518Doc2adouble C2 domain alpha1181457415181462528Rat
621724Oatornithine aminotransferase1187347862187367644Rat
619843Gpr26G protein-coupled receptor 261186766001186805435Rat
68372Ctbp2C-terminal binding protein 21187782064187918115Rat
1304666Paip2l1polyadenylate-binding protein-interacting protein 2-like 11179077576179079040Rat
621048Gtf3c1general transcription factor IIIC subunit 11180203995180270201Rat
620346Zg16zymogen granule protein 161181657722181660079Rat
69235Htra1HtrA serine peptidase 11185497815185547380Rat
3767Sult1a1sulfotransferase family 1A member 11181272022181276750Rat
628637PycardPYD and CARD domain containing1182601657182603013Rat
1304823Kdm8lysine demethylase 81180013969180028829Rat
1304950Il21rinterleukin 21 receptor1180168028180195690Rat
620802Latlinker for activation of T cells1180936536180941561Rat
2611Fgfr2fibroblast growth factor receptor 21184745418184850655Rat
3562Rgs10regulator of G-protein signaling 101182946334182987729Rat
1305014C1h10orf88similar to human chromosome 10 open reading frame 881186132360186149932Rat
620024Phkg2phosphorylase kinase catalytic subunit gamma 21182184362182197124Rat
1305592Pagr1Paxip1-associated glutamate-rich protein 11181622708181624996Rat
1306257Zfp629zinc finger protein 6291182217499182258585Rat
1306744Nkx1-2NK1 homeobox 21187388711187391149Rat
1306725Ahspalpha hemoglobin stabilizing protein1182879901182885508Rat
1306289Plpp4phospholipid phosphatase 41183829794183959319Rat
1306538Orai3ORAI calcium release-activated calcium modulator 31182381196182386055Rat
1306553Armc5armadillo repeat containing 51182820141182826913Rat
1306730Mcmbpminichromosome maintenance complex binding protein1183270598183316975Rat
1310609Sgf29SAGA complex associated factor 291181238449181271931Rat
1306463Hirip3HIRA interacting protein 31181472056181475082Rat
1305903Zfp771zinc finger protein 7711181864013181875137Rat
70932Mvpmajor vault protein1181594734181622336Rat
1303107Vkorc1vitamin K epoxide reductase complex, subunit 11182502491182505012Rat
1306654Bub3BUB3 mitotic checkpoint protein1186330358186340969Rat
735189Kctd13potassium channel tetramerization domain containing 131181534534181552843Rat
2198Bckdkbranched chain ketoacid dehydrogenase kinase1182515335182520007Rat
1307760Nsmce1NSE1 homolog, SMC5-SMC6 complex component1180030355180058541Rat
1307794Bag3BAG cochaperone 31183103038183126862Rat
1307216Septin1septin 11181832700181836566Rat
620009Coro1acoronin 1A1181295561181300566Rat
1305613Spns1sphingolipid transporter 11180942088180949415Rat
1306300Eef1akmt2EEF1A lysine methyltransferase 21187616156187640937Rat
1308623Zfp668zinc finger protein 6681182474633182484957Rat
1308827Sephs2selenophosphate synthetase 21181893146181895464Rat
1560566Tmem219transmembrane protein 2191181496194181509258Rat
1308439Bcl7cBAF chromatin remodeling complex subunit BCL7C1182277163182324274Rat
1359187Lhppphospholysine phosphohistidine inorganic pyrophosphate phosphatase1187403390187494577Rat
1308386Gdpd3glycerophosphodiester phosphodiesterase domain containing 31181373505181383063Rat
1559891RGD1559891similar to synaptonemal complex protein 31186108544186111598Rat
1310799Fam53bfamily with sequence similarity 53, member B1187500061187591186Rat
1309025Nsmce4aNSE4 homolog A, SMC5-SMC6 complex component1185102075185109166Rat
1311512Kat8lysine acetyltransferase 81182524355182536638Rat
1311886Kif22kinesin family member 221181635347181650351Rat
1309086Cd19CD19 molecule1180987286180993920Rat
1310765Zfp688zinc finger protein 6881182039366182043045Rat
1311568Slx1bSLX1 homolog B, structure-specific endonuclease subunit1181286190181291739Rat
1311491Xpo6exportin 61180672114180761543Rat
1311741Cd2bp2Cd2 (cytoplasmic tail) binding protein 21181809399181815269Rat
1310965Ikzf5IKAROS family zinc finger 51186169108186188847Rat
1311454Btbd16BTB domain containing 161185334971185389518Rat
1308215Tlcd3bTLC domain containing 3B1181421104181439744Rat
1310955Cpxm2carboxypeptidase X (M14 family), member 21186836797186947222Rat
1308254Ctf2cardiotrophin 21182334061182342406Rat
1309328Sec23ipSEC23 interacting protein1183320950183363944Rat
1311624Setd1aSET domain containing 1A, histone lysine methyltransferase1182386197182411695Rat
1309335Ate1arginyltransferase 11184961548185081112Rat
1310309Qprtquinolinate phosphoribosyltransferase1181718189181733486Rat
1305777Inpp5finositol polyphosphate-5-phosphatase F1183190480183270276Rat
1306636Asphd1aspartate beta-hydroxylase domain containing 11181552974181556842Rat
1307716Tbx6T-box transcription factor 61181387851181392762Rat
1308864FusFus RNA binding protein1182576479182590417Rat
1310127Rusf1RUS family member 11182852257182881652Rat
1308871Eif3ceukaryotic translation initiation factor 3, subunit C1181134604181152489Rat
1308918Abraxas2abraxas 2, BRISC complex subunit1187647078187672660Rat
1305501TufmTu translation elongation factor, mitochondrial1181073788181077395Rat
1309191Tbc1d10bTBC1 domain family, member 10b1181814972181826628Rat
1562283C1h10orf120similar to human chromosome 10 open reading frame 1201185910420185913486Rat
1564195Prrt2proline-rich transmembrane protein 21181625243181628905Rat
1560958Fam24bfamily with sequence similarity 24 member B1186112544186115998Rat
1561420Il27interleukin 271181173108181178720Rat
1559927Hmx3H6 family homeobox 31186313237186315201Rat
1565363Bola2bolA family member 21181291777181292836Rat
1563285RGD1563285similar to RIKEN cDNA 1700022C211185088154185091961Rat
1560948Fam24afamily with sequence similarity 24, member A1186119918186122932Rat
1561579Zfp646zinc finger protein 6461182485009182494961Rat
1564300Pstkphosphoseryl-tRNA kinase1186157730186168145Rat
1562278Gsg1lGSG1-like1180440403180654430Rat
1563217C1h16orf92similar to human chromosome 16 open reading frame 921181434524181441000Rat
628881Chst15carbohydrate sulfotransferase 151187028860187107908Rat
1564153Plekha1pleckstrin homology domain containing A11185427982185479157Rat
1359572Ino80eINO80 complex subunit E1181461406181472059Rat
1310989Fbxl19F-box and leucine-rich repeat protein 191182356899182380839Rat
1565281Sez6l2seizure related 6 homolog like 21181557109181577456Rat
1303004Tacc2transforming, acidic coiled-coil containing protein 21185139223185327881Rat
1359096Nfatc2ipnuclear factor of activated T-cells 2 interacting protein1180954834180971847Rat
1565272Rps23-ps4ribosomal protein S23, pseudogene 41187683563187684283Rat
1565868Atxn2lataxin 2-like1181078293181090079Rat
1564503C1h16orf54similar to human chromosome 16 open reading frame 541181702447181705128Rat
1566127Prss53serine protease 531182494944182501607Rat
1562778Trim72tripartite motif containing 721182613753182621613Rat
1565642SrcapSnf2-related CREBBP activator protein1182123562182172643Rat
1564579Ypel3yippee-like 31181384385181387706Rat
1565169Apobrapolipoprotein B receptor1181168982181173528Rat
1565366Hmx2H6 family homeobox 21186319110186326771Rat
1587347Wdr11WD repeat domain 111184165260184210834Rat
1586192Cfl1-ps5cofilin 1, pseudogene 51187296660187297219Rat
1561123Itgaxintegrin subunit alpha X1182709653182740709Rat
1359537Cln3CLN3 lysosomal/endosomal transmembrane protein, battenin1181156071181169458Rat
1596229Rps2-ps13ribosomal protein S2, pseudogene 131183041102183041973Rat
1593186Prss36serine protease 361182543085182561141Rat
1593368Cfap119cilia and flagella associated protein 1191182197171182216936Rat
1594599Zfp764l1zinc finger protein 764 like 11182003289182006220Rat
1594591Fbrsfibrosin1182090741182104026Rat
1594592Prr14proline rich 141182083836182089330Rat
1593335Parl-ps1presenilin associated, rhomboid-like, pseudogene 11183970720183973464Rat
1596000LOC691716similar to ribosomal protein S15a1179267937179268386Rat
1594632MazMYC associated zinc finger protein1181629742181635193Rat
1597558Rpl36a-ps16ribosomal protein L36A, pseudogene 161181198779181200729Rat
1593322Dmbt1l1deleted in malignant brain tumors 1 like 11185949897186084340Rat
1591907Psme2-ps3proteasome activator subunit 2, pseudogene 31181699598181701538Rat
1595845Tial1Tia1 cytotoxic granule-associated RNA binding protein-like 11183008358183045092Rat
1595846Katnipkatanin interacting protein1180270194180436766Rat
1598280Ndufa13-ps4NADH:ubiquinone oxidoreductase subunit A13, pseudogene 41181908186181908668Rat
1598282Hsp90aa1-ps12heat shock protein 90 alpha family class A member 1, pseudogene 121179298331179300568Rat
1595928LOC691797similar to developmental pluripotency-associated 31181255033181256222Rat
3141Myl11myosin light chain 111181829703181832546Rat
2304343LOC100271845hypothetical protein LOC1002718451179913067179915467Rat
2319903Ankrd37-ps1ankyrin repeat domain 37, pseudogene 11181915673181916779Rat
2320900LOC100361060ribosomal protein L36-like1180985733180986204Rat
2321751Zranb1zinc finger RANBP2-type containing 11187725354187780129Rat
6493252LOC100911413deleted in malignant brain tumors 1 protein-like1185724946185900431Rat
6494949LOC100911081uncharacterized LOC1009110811184919721184921647Rat
7523242Tmem265transmembrane protein 2651182172704182176600Rat
7541351LOC102548820uncharacterized LOC1025488201180906441180915707Rat
7540019Zfp764zinc finger protein 7641182002868182013202Rat
7665911LOC102551752uncharacterized LOC1025517521186961903186967497Rat
7622122LOC102552773uncharacterized LOC1025527731188120174188148128Rat
7624587LOC102556135uncharacterized LOC1025561351182651431182657380Rat
7595014LOC102551806uncharacterized LOC1025518061181337803181350648Rat
7608714Prkacb-ps1protein kinase cAMP-activated catalytic subunit beta, pseudogene 11181968826181977581Rat
7609558Zfp768zinc finger protein 7681181966314181970568Rat
7589362LOC102552031uncharacterized LOC1025520311187595895187599379Rat
7545369LOC102553602uncharacterized LOC1025536021181882683181908124Rat
7565604LOC102548041uncharacterized LOC1025480411179861450179897789Rat
7690555Odc1-ps5ornithine decarboxylase 1, pseudogene 51182021072182023661Rat
7704573LOC102555739uncharacterized LOC1025557391184226732184300750Rat
7676737CdiptosCDIP transferase, opposite strand1181579391181583017Rat
7732136LOC102555965uncharacterized LOC1025559651184499296184507745Rat
9134980LOC103691232uncharacterized LOC1036912321179491910179525433Rat
9213265LOC103691235uncharacterized LOC1036912351181407345181421545Rat
9097294LOC103691241uncharacterized LOC1036912411185235012185242949Rat
9115869Znf48zinc finger protein 481181853047181858997Rat
9122392LOC103691233uncharacterized LOC1036912331180060750180065930Rat
9074604LOC103691238zinc finger protein 239-like1182809465182820548Rat
9242866LOC103691239uncharacterized LOC1036912391182934054182937398Rat
9370590LOC103691243uncharacterized LOC1036912431184081122184090817Rat
9425804LOC103691253uncharacterized LOC1036912531187881345187920159Rat
9467587LOC103695038uncharacterized LOC1036950381179567858179588897Rat
9416532LOC103695040eukaryotic translation initiation factor 1 pseudogene1182013409182018191Rat
9685081Mir762microRNA 7621182323863182323937Rat
11363866LOC108349642uncharacterized LOC1083496421181314109181322318Rat
11454674LOC108349784ATP synthase subunit g, mitochondrial pseudogene1188001281188001656Rat
11458824LOC108349648uncharacterized LOC1083496481182434563182440128Rat
11364130LOC108349861high mobility group protein B1 pseudogene1188005315188006052Rat
11415131LOC108349643uncharacterized LOC1083496431181508682181514176Rat
11422907Hs3st4heparan sulfate-glucosamine 3-sulfotransferase 41178539078178944851Rat
11426694LOC108349652uncharacterized LOC1083496521183588849183601186Rat
11380105Rpl32-ps5ribosomal protein L32, pseudogene 51178932751178934454Rat
11478122LOC108349649glyceraldehyde-3-phosphate dehydrogenase pseudogene1185016384185017383Rat
11478799LOC108349640uncharacterized LOC1083496401180783169180807007Rat
11480240LOC108349644uncharacterized LOC1083496441181649574181655535Rat
11508576LOC108349639uncharacterized LOC1083496391180764861180777765Rat
11499736LOC10834852260S ribosomal protein L27 pseudogene1187299584187299998Rat
11482889LOC10834978340S ribosomal protein S19 pseudogene1183046566183051192Rat
41353902Trnaa-agc75transfer RNA alanine (anticodon AGC) 751187277128187277208Rat
41136694LOC120099941uncharacterized LOC1200999411184226008184228759Rat
41113689Rpl8-ps1ribosomal protein L8, pseudogene 11181355488181356318Rat
41357835Rnu1-140RNA, U1 small nuclear 1401182658147182658307Rat
41206132LOC120099942uncharacterized LOC1200999421186614202186617524Rat
41171707LOC120100354small nucleolar RNA SNORA36 family1183310598183310728Rat
41171888LOC120100410small nucleolar RNA SNORA481179035249179035391Rat
41326170LOC1201003285S ribosomal RNA1182252145182252263Rat
41328408Rps27-ps7ribosomal protein S27, pseudogene 71186877655186877923Rat
41149849LOC120098013uncharacterized LOC1200980131184024534184029616Rat
41330895LOC120099936uncharacterized LOC1200999361182089659182090611Rat
41365537LOC120098029uncharacterized LOC1200980291184447134184450177Rat
41366349Trnap-agg25transfer RNA proline (anticodon AGG) 251185164152185164232Rat
41098606LOC120100182U6 spliceosomal RNA1181153246181153352Rat
41179471LOC120099931uncharacterized LOC1200999311180777618180793202Rat
41343776LOC120097358uncharacterized LOC1200973581180007548180011104Rat
41367722LOC120099939uncharacterized LOC1200999391182637160182642709Rat
41368305LOC120099938uncharacterized LOC1200999381182611965182616488Rat
41100855Mospd3-ps1motile sperm domain containing 3, pseudogene 11186237011186249134Rat
41126597Rnu2-62RNA, U2 small nuclear 621181189588181189777Rat
41346008LOC120100487small nucleolar RNA U1091183371628183371752Rat
41103135LOC120099932uncharacterized LOC1200999321180672788180675189Rat
41103194Snora30small nucleolar RNA, H/ACA box 301182139388182139521Rat
41270156LOC120100399small nucleolar RNA SNORA481184576350184576490Rat
41270294LOC120099937uncharacterized LOC1200999371182104306182122935Rat
41186776LOC120100418small nucleolar RNA SNORA171186086712186086840Rat
41012033LOC120099944uncharacterized LOC1200999441187432306187435276Rat
40974486LOC120099934uncharacterized LOC1200999341181728557181731580Rat
40967984LOC120099940uncharacterized LOC1200999401182890478182896780Rat
41074948LOC120099935uncharacterized LOC1200999351182073557182081100Rat
41049102LOC120099943uncharacterized LOC1200999431187013396187022780Rat
41057227LOC120097359uncharacterized LOC1200973591180145598180148961Rat
41298058LOC120100124U6 spliceosomal RNA1181409122181409228Rat
41038307Rpl35a-ps4ribosomal protein L35A, pseudogene 41183742802183743442Rat
41017423LOC120099945uncharacterized LOC1200999451187480900187493664Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10138D1Arb191891181406902181407091Ratregion
10580D1Smu51184740646184740858Ratregion
10818D1Smu101271182657959182658086Ratregion
10923D1Wox191551181133855181134010Ratregion
10951D1Mit133401181829673181830018Ratregion
10952D1Wox211041181829824181829932Ratregion
10953D1Arb183471181829744181830126Ratregion
10954D1Wox321881181829796181829988Ratregion
11359D1Arb212551182418219182418476Ratregion
11360D1Got1651461182416572182416718Ratregion
37556D1Rat1301541185145134185145286Ratregion
35174D1Rat661491179567751179567900Ratregion
35346D1Rat651471180381412180381541Ratregion
35535D1Rat1101371185635395185635534Ratregion
37748D1Rat1201991183520307183520518Ratregion
36592D1Rat641771180359209180359386Ratregion
36636D1Rat671741184158914184159091Ratregion
36719D1Rat1081481179773921179774069Ratregion
35851D1Rat681561188377360188377506Ratregion
38182D1Rat1981991180633892180634097Ratregion
38192D1Rat2192481183970203183970443Ratregion
38842D1Rat1572131185049847185050062Ratregion
39006D1Rat1932111178810256178810465Ratregion
42066D1Arb201381183618910183619055Ratregion
42518D1Rat3642231185538160185538396Ratregion
41012D1Rat2872111185356336185356530Ratregion
43349D1Got1682311183757081183757312Ratregion
43350D1Got1662211182657961182658182Ratregion
43352D1Got1641251182336346182336470Ratregion
43353D1Got1672181182444287182444505Ratregion
43354D1Got1691671183819623183819785Ratregion
43355D1Got1731811185151421185151602Ratregion
43356D1Got1701801187264526187264706Ratregion
43357D1Got1741651186289342186289505Ratregion
43358D1Got1721451186868901186869046Ratregion
43360D1Got1711461186617022186617166Ratregion
43363D1Got1772521186289266186289503Ratregion
60597D8Got1331551179722686179722841Ratregion
60239D1Got2751981179781198179781396Ratregion
625784D1Got1631251182743688182743813Ratregion
66418D1Mco92101180611319180611533Ratregion
66564D1Mco162221181402086181402308Ratregion
67767D1Uwm61721181342124181342294Ratregion
67771D1Uwm71061186724110186724220Ratregion
1631665D1Got3361581186931966186932124Ratregion
1627278D1Mco292321181829743181829979Ratregion
1629174D1Got3341881180813817180814005Ratregion
1629854D1M7Mit2061011180105590180105691Ratregion
1641202D1Got3352071184255632184255839Ratregion
1641409D1Got4421411179936900179937039Ratregion
1632925D1Got393921180184027180184119Ratregion
1639847D1Wox411191181406863181406982Ratregion
1640136D1Got4291731180971147180971324Ratregion
1634870D1Got3752011186975825186976026Ratregion
1636248D1Got3332501183962783183963033Ratregion
1637280D1Got4032161179523501179523719Ratregion
1632492D1Got4092501179939914179940164Ratregion
7193070AW527407961185461023185461119Ratregion
5035837PMC21657P13671181461236181461603Ratregion
5036019PMC86286P19721181632120181633092Ratregion
5036093Bckdk01182518763182519692Ratregion
5036243D7Wsu87e2511187779055187779306Ratregion
5039242RH1275942131181076537181077179Ratregion
5036464Prkm3-rs11691181372667181372836Ratregion
5039024RH1274691971187348354187348551Ratregion
5039096RH1275101841181272105181272289Ratregion
5035514EST-CFZ977461021187671389187671491Ratregion
5031270PMC123054P15961180992719180993315Ratregion
5026000RH1305241811181586742181586923Ratregion
5026012RH1305711511180719599180719750Ratregion
7206220Hs3st42451178944530178944775Ratregion
5026222RH1313821901181213400181214661Ratregion
5034345D16S31353071180779958180780265Ratregion
5026506RH1324742081181813994181814208Ratregion
5029167RH1437681131187095324187095437Ratregion
5034756AI0102482101184963661184963871Ratregion
5026790RH1335381831185342409185342592Ratregion
5026886RH1339062071181975550181975757Ratregion
5032283AI4627461271181026471181026598Ratregion
5027058RH111061341184782109184782243Ratregion
5032381AI4295441011186133062186133163Ratregion
5035400BM3867581651186166998186167163Ratregion
5034860AA8497201431185096914185098279Ratregion
5027345AI1954431141182414966182415080Ratregion
5027363AI4295751131181908348181908463Ratregion
5030015AI0726022071187779887187780094Ratregion
5032789RH1353061971181007035181007232Ratregion
5032987RH1372082081186231206186231414Ratregion
5027607C879631391181816564181816703Ratregion
502782702.mHAa3d2.seq1551184048199184048354Ratregion
5030551AW5345891591185352369185352528Ratregion
5025318RH1278562071183269697183269904Ratregion
5030731BI3019352131187329562187329775Ratregion
5030797BE1201651921182945823182946015Ratregion
5030807BE1202621591182411694182411853Ratregion
5033631RH1395341911187352792187352983Ratregion
5025748RH1295091961182788619182788899Ratregion
5025852RH1299371941181629815181630009Ratregion
5028478AI4138161161181439602181439718Ratregion
5051819RH946762791182790344182790624Ratregion
5054951RH1435201411184848106184848253Ratregion
5051429AI2668901121181272146181272258Ratregion
5051433AI647766891181718553181718642Ratregion
5055901RH1440682391181493939181494178Ratregion
5056133RH1442012811182273034182273315Ratregion
5056455RH1443881391182465303182465442Ratregion
5056509RH1444191921186790919186791111Ratregion
5056699RH1445291401187808280187808420Ratregion
5056835RH1446082121182524006182524218Ratregion
5056967RH1446841521187108610187108762Ratregion
5057169D1Bda352821181272260181272645Ratregion
5057173D1Bda381241186226976186227761Ratregion
5057171D1Bda373701187348178187348548Ratregion
5059428AI706765901182415339182415429Ratregion
5057752BF3861301511181337813181337964Ratregion
5055899RH1440672861186617130186617416Ratregion
5055927RH1440832821181624691181624973Ratregion
5056021RH1441371271178837211178837338Ratregion
5058816BI2780711871181372449181372636Ratregion
5059608BE0974281551180441059180441214Ratregion
5059670BF394153961180288181180288277Ratregion
5056487RH1444072851183011202183011487Ratregion
5052466AU0160791851181393041181393226Ratregion
5058168BF3867351501187470016187470166Ratregion
5058870BF393772911185501767185501858Ratregion
5058886BI2781391751187494286187494461Ratregion
5058980BE1026641681187478503187478671Ratregion
5058988BE1026721591181835153181835312Ratregion
5059864BE1034491591180280954180281113Ratregion
5055595RH1438913001181009824181010124Ratregion
5058228BF3868531501187097298187097447Ratregion
5058248BI2778251831184966233184966416Ratregion
5058286BF3869581641186234098186234262Ratregion
505221744.MMHAP44FLG5.seq2221184914818184915040Ratregion
5052398D7Mit1351311184585024184585155Ratregion
5059074BF3874201521181239200181239352Ratregion
5050746RH1342341921182066010182066202Ratregion
5053637RH1427641851183268631183268816Ratregion
5053865RH1428951431182275162182275305Ratregion
5049866RH1337272161186343606186343822Ratregion
5049932RH1337652071181622875181623082Ratregion
5052468AI3260291641182040104182040268Ratregion
5051120RH1344511841181552581181552765Ratregion
5053911RH1429222271182472735182472962Ratregion
5051431AW1215661261181577001181577127Ratregion
5054381RH1431911261187599167187599293Ratregion
5050798RH1342641801181594771181594951Ratregion
5041858RH1290992181187672418187672636Ratregion
5040860RH1285251841182320418182321225Ratregion
5043246RH1299162441181439487181439731Ratregion
5043486RH1300521941182590207182590401Ratregion
5043620RH1301301561180853993180854149Ratregion
5043808RH1302391901187782920187783110Ratregion
5043818RH1302452191181858731181858950Ratregion
5045012RH1309321911186088990186089187Ratregion
5045168RH1310232081181832729181832937Ratregion
5045396RH1311541861183272210183273047Ratregion
5046242RH1316401841181172878181173062Ratregion
5044820RH1308221831187778657187778840Ratregion
5048806RH1331161951182385549182385744Ratregion
5044472RH1306221931184964164184964357Ratregion
5046488RH1317822061186836840186837050Ratregion
5047502RH1323642061181809437181809643Ratregion
5047570RH1324042121182946504182946716Ratregion
5047622RH1324331971181288051181288442Ratregion
5047806RH1325392181180936605180936975Ratregion
5049236RH1333641801179077849179078028Ratregion
5049370RH1334421801186089535186089715Ratregion
5049690RH1336251801184237133184237313Ratregion
5049728RH1336471811181577145181577326Ratregion
5042130RH1292571521179078689179078953Ratregion
5048438RH1329042151182788162182788377Ratregion
5049504RH1335192191182332974182333193Ratregion
5040054RH1280632201187781015187781235Ratregion
5040140RH1281121941182502683182502877Ratregion
5040246RH1281731891186175849186176038Ratregion
5042686RH1295841881181587075181587263Ratregion
5042954RH1297441801181156170181156350Ratregion
5040714RH1284412091180204089180204298Ratregion
5040730RH1284501891182826646182826835Ratregion
5040818RH1285012151186341393186341608Ratregion
5043456RH1300361811182885299182885480Ratregion
5042834RH1296731921182196855182197047Ratregion
5040556RH1283512001181134611181134912Ratregion
5042924RH1297252091187500182187500391Ratregion
5072818RH1370721761181479612181479788Ratregion
5075196RH1384541481182275027182275175Ratregion
5072014RH1354151981180401614180401812Ratregion
5072078RH1366381931182529083182529276Ratregion
5072142RH1366751811181534672181534853Ratregion
5073888RH1376962211183300016183300237Ratregion
5075738RH1387681271185479432185479559Ratregion
5074202RH1378801531180440456180440609Ratregion
5072668RH1369832091181704895181705104Ratregion
5076648RH1392981551187599182187599337Ratregion
5075496RH1386271531182945573182945726Ratregion
5076128RH1389951241182557546182557670Ratregion
5079372RH1409582071178944444178944651Ratregion
5075806RH1388081241187848881187849005Ratregion
5078994RH1406721801184850267184850447Ratregion
5080090RH1413772021181728759181728961Ratregion
5078484RH1403691571187352827187352984Ratregion
5080298RH1414992191181292543181292762Ratregion
5080298RH1414992191181292543181292762Ratregion
5070978RH1348162111180028083180028294Ratregion
5073364RH1373932021182067667182067869Ratregion
5073460RH1374492181184099451184100844Ratregion
5080532RH1416341861182386555182386741Ratregion
5078758RH1405351681182221179182221347Ratregion
5078880RH1406052151184919961184920176Ratregion
5073822RH1376592331186169484186169717Ratregion
5070632RH1346132111180942205180942416Ratregion
5072898RH1371181941182587365182587559Ratregion
5071680RH1352221881181286962181287150Ratregion
5073642RH1375542191180436494180436713Ratregion
5072348RH1367972331180010712180010945Ratregion
5074588RH1381031391182599769182599908Ratregion
5071858RH1353251981182535741182536093Ratregion
5068288AU0472362011183888971183889172Ratregion
5068530AU0470901431180770364180771475Ratregion
5068568AU0470671831184110394184110577Ratregion
5061900AW5274071221185461021185461143Ratregion
5064060BE1205771591188120831188120990Ratregion
5065466BE1090051651187813859187814024Ratregion
5062530BF4033691581182217269182217427Ratregion
5064172BE1207121801181276538181276718Ratregion
5064194BE1141961791182072874182073053Ratregion
5060180BI2796311251181268004181268131Ratregion
5060540BE0983901951183326747183326942Ratregion
5065488BI2978652191187919817187920035Ratregion
5060840BI2867251781183363506183363684Ratregion
5065908BE1160501941184917416184917628Ratregion
5066086BE1167712011182508106182508307Ratregion
5061058BF4019441871187840123187840310Ratregion
5061112AW5323911901183102664183102854Ratregion
5062846AW5285961771187918794187918971Ratregion
5064596BE1081791551187779431187779586Ratregion
5066148BF407069941187029707187029801Ratregion
5061262AW5269381551184961626184961781Ratregion
5063078BI3012041881187486887187487075Ratregion
5064938BF399977941181811953181812047Ratregion
5061594BF402116911182128738182128829Ratregion
5082133BF4098681111181854117181854228Ratregion
5087066BQ1928271541187030721187030875Ratregion
5087474PMC20217P11451184782049184782194Ratregion
5087496PMC209300P14651182458371182458836Ratregion
5082341BI2745721601185547109185547269Ratregion
5082659BE1199471661180670675180670841Ratregion
5082713BG3738381331187919817187919950Ratregion
5083219BI2754361531182543141182543294Ratregion
5083599BI2829531541182601782182601936Ratregion
5088355AU0485202641184014685184014949Ratregion
5089419AU0491452031184412092184412297Ratregion
5090383AU0497181841184656820184657004Ratregion
5090501AU0497872271187201556187201783Ratregion
5081539BE1172731591185061485185061644Ratregion
5084386AI1773011491182009486182009635Ratregion
5081881BE1186251851187919069187919254Ratregion
5085082AI5480561511182852272182852423Ratregion
5085129BQ1955731741186125543186125717Ratregion
5090399AU0497282681181227661181227929Ratregion
5081206RH1420261811186132392186132573Ratregion
5085497BM3831871551184777963184778118Ratregion
5088995AU0488921291187328683187328812Ratregion
5089177AU0490011231184452176184452299Ratregion
5082591BE1198081691186788653186788822Ratregion
5085936BM3844822131185819342185819555Ratregion
5084468AI1696051131187483450187483563Ratregion
5084552AA8512351151180987970180988254Ratregion
5082853BF3902741521183271393183271545Ratregion
5086108BF3877321521185452462185452614Ratregion
5086407AI4123331541183009291183009445Ratregion
5081270RH1420632131182218415182218628Ratregion
5084814AI1793781441182536658182536802Ratregion
5083063BF3907301521182543141182543293Ratregion
5083231BI27559801181474529181474783Ratregion
5083387BF3910301971181267902181268099Ratregion
5083721AI0102312151182656409182657281Ratregion
5503078Cox6a21281182788679182788891Ratregion
5503583Fgfr21191184826519184826638Ratregion
5503702ATXN2L_92537661181078284181079050Ratregion
5504402PMC18827P11251180133114180133239Ratregion
5506217Coro1a2461181296092181296456Ratregion
5506598UniSTS:27942301181049320181050829Ratregion
5507019fk09c07.x13231179860208179860530Ratregion
5499951UniSTS:2357761851180305444180305629Ratregion
5499955UniSTS:2357862521182223610182223862Ratregion
5499957UniSTS:2357822351181439386181439621Ratregion
5500190REN213602261178852855178853081Ratregion
5500192REN221802281179044200179044428Ratregion
5500286D5S2301E1121179077600179077712Ratregion
5500296D20S1002551181393450181393505Ratregion
5500182D7Mit1054901183150556183151046Ratregion
5503001Prkacb801181975264181975344Ratregion
5500499RH12658301181811224181811520Ratregion
5500557RH1359711981181471565181471921Ratregion
5500755D22S11755841182904517182905880Ratregion
5501065PMC133757P13611181052874181053830Ratregion
5501552G241951251182103860182103985Ratregion
5505110Hmx312921186313584186314876Ratregion
5501586RH913541291181831522181831740Ratregion
5501610RH472501261181402672181402798Ratregion
5502539RH1252061011180694294180694395Ratregion
Position Markers

Flank 1: (D1Rat193)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21178,810,256 - 178,810,465 (-)MAPPER
Rnor_6.01193,968,438 - 193,968,646NCBI
Rnor_5.01201,022,827 - 201,023,035UniSTS
RGSC_v3.41183,163,129 - 183,163,338RGD
RGSC_v3.41183,163,130 - 183,163,338UniSTS
RGSC_v3.11183,304,795 - 183,305,004RGD
Celera1176,493,113 - 176,493,323UniSTS
SHRSP x BN Map190.2799RGD
SHRSP x BN Map190.2799UniSTS
FHH x ACI Map186.55RGD
Cytogenetic Map1q36UniSTS
Flank 2: (D1Rat68)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21188,377,360 - 188,377,506 (+)MAPPER
Rnor_6.01205,603,081 - 205,603,226NCBI
Rnor_5.01212,591,076 - 212,591,221UniSTS
RGSC_v3.41193,069,836 - 193,070,197RGD
RGSC_v3.41193,070,039 - 193,070,184UniSTS
RGSC_v3.11193,219,920 - 193,220,065RGD
Celera1186,117,126 - 186,117,271UniSTS
RH 3.4 Map11433.4UniSTS
RH 3.4 Map11433.4RGD
RH 2.0 Map11014.7RGD
SHRSP x BN Map197.04RGD
FHH x ACI Map191.06RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132737458199368955Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)149393289199050459Rat
1578780Cm52Cardiac mass QTL 523.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)181591954219808434Rat
1358902Bw47Body weight QTL 471.67body mass (VT:0001259)body weight (CMO:0000012)190508614180359386Rat
1331751Bp199Blood pressure QTL 1993.60022arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)194494440181830018Rat
1331749Hrtrt11Heart rate QTL 112.973heart pumping trait (VT:2000009)heart rate (CMO:0000002)194494440198211706Rat
70209Niddm23Non-insulin dependent diabetes mellitus QTL 232.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)194494440198324465Rat
731168Bp154Blood pressure QTL 1543.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)194642722214537671Rat
8655649Arrd1Age-related retinal degeneration QTL 14.89retinal layer morphology trait (VT:0003727)percentage of study population developing retinopathy during a period of time (CMO:0002453)1100357752183970443Rat
1354591Cm36Cardiac mass QTL 364.1heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1102813953201278233Rat
1354615Cm32Cardiac mass QTL 325.2heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)1102813953201278233Rat
1354606Bp246Blood pressure QTL 2463.6arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)1102813953218753816Rat
1300158Bp173Blood pressure QTL 1733.48arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)1115540693185145286Rat
7794788Mcs32Mammary carcinoma susceptibility QTL 322.61mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)1115540693238914717Rat
7421630Bp362Blood pressure QTL 3620.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1118608292241799120Rat
631205Bp196Blood pressure QTL 19640.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1118944897199050459Rat
631544Bp84Blood pressure QTL 845.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1123350408181759564Rat
1358189Cstrr1Cold stress response QTL 10.0001catecholamine amount (VT:0010543)urine norepinephrine level (CMO:0001629)1123350408182418476Rat
1641895Bp298Blood pressure QTL 298arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1123350408182418476Rat
1578770Stresp23Stress response QTL 23kidney sympathetic nerve activity (VT:0004050)stimulated renal sympathetic nerve activity to basal renal sympathetic nerve activity ratio (CMO:0001786)1123350408182418476Rat
631549Bp89Blood pressure QTL 895.7arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1123350581201284552Rat
71118Thym1Thymus enlargement QTL 110.170.001thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)1136829932181829932Rat
724550Thym3Thymus enlargement QTL 37.820.001thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)1136829932181829932Rat
631519Pia11Pristane induced arthritis QTL 115.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1136830018181830018Rat
1598853Memor3Memory QTL 34.5exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)1143506580212458660Rat
61348Bp30Blood pressure QTL 302.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1144017057197814409Rat
70160Bw18Body weight QTL 185.7body mass (VT:0001259)body weight (CMO:0000012)1144267353196383635Rat
737828Hcas3Hepatocarcinoma susceptibility QTL 34.9liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)1144267353222987745Rat
2302378Insul11Insulin level QTL 113.25blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1144267353251128347Rat
7771612Cm80Cardiac mass QTL 808.4heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)1149448574221264292Rat
724531Uae5Urinary albumin excretion QTL 54urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)1150700142252085212Rat
1578759Uae30Urinary albumin excretion QTL 303.30.003urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1150700247252085048Rat
1578778Pur4Proteinuria QTL 43.30.003urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)1150700247252085048Rat
1354602Bw35Body weight QTL 3512.2body mass (VT:0001259)body weight (CMO:0000012)1151162512201278233Rat
1354620Kidm19Kidney mass QTL 194kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1151162512201278233Rat
1354634Kidm12Kidney mass QTL 123.9kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)1151162512201278233Rat
1354636Lmblg1Limb length QTL 16.4tibia length (VT:0004357)tibia length (CMO:0000450)1151162512201278233Rat
1354610Bw34Body weight QTL 344.1body mass (VT:0001259)body weight (CMO:0000012)1151162512256448636Rat
1354646Kidm18Kidney mass QTL 185.7kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1151162512256448636Rat
1354661Bw33Body weight QTL 335.2body mass (VT:0001259)body weight (CMO:0000012)1151162512256448636Rat
1358886Bp260Blood pressure QTL 2603.67arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1151162766225824951Rat
61343Bp28Blood pressure QTL 28arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1151646613196646613Rat
1549837Hcar15Hepatocarcinoma resistance QTL 150.05liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1153136852260522016Rat
2303622Vencon6Ventilatory control QTL 60.001respiration trait (VT:0001943)respiration rate (CMO:0000289)1154561505199561505Rat
4889428Stresp24Stress response QTL 240.05heart pumping trait (VT:2000009)absolute change in electrocardiographic low frequency R-R spectral component to high frequency R-R spectral component ratio (CMO:0002162)1155866514200866514Rat
1354618Kidm15Kidney mass QTL 155kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)1156677124201278233Rat
2312420Pur17Proteinuria QTL 177.10.0001urine protein amount (VT:0005160)urine total protein excretion rate (CMO:0000756)1156677124218753816Rat
1354580Scort1Serum corticosterone level QTL 13.4blood corticosterone amount (VT:0005345)blood corticosterone level (CMO:0001172)1156677124256448636Rat
61347Bp197Blood pressure QTL 1974.2arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)1158633083203633083Rat
2292222Bp307Blood pressure QTL 3073.060.0014arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1164310393213533942Rat
2292220Bp306Blood pressure QTL 3063.470.00087arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1164310393243914901Rat
619613Bp77Blood pressure QTL 770.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1164747424209747424Rat
619613Bp77Blood pressure QTL 770.01arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)1164747424209747424Rat
737974Bp161Blood pressure QTL 1610.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1164747558181133855Rat
2312558Glom17Glomerulus QTL 173.90.001kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)1166532971191278129Rat
1354653Despr9Despair related QTL 90.00019locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1167909849212909849Rat
619614Bp78Blood pressure QTL 780.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1169112897197261052Rat
619614Bp78Blood pressure QTL 780.001arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)1169112897197261052Rat
61341Bp26Blood pressure QTL 26arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1169537671214537671Rat
724562Rends1Renal damage susceptibility QTL 10.05kidney glomerulus integrity trait (VT:0010546)index of glomerular damage (CMO:0001135)1169537671214537671Rat
1358294Bw37Body weight QTL 3750.000011body mass (VT:0001259)body weight (CMO:0000012)1171310381216310381Rat
2293689Bss47Bone structure and strength QTL 477.250.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)1171629477216629477Rat
2293693Bss22Bone structure and strength QTL 2233.520.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1171629477216629477Rat
2300161Bmd43Bone mineral density QTL 438.40.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)1171629477216629477Rat
2300174Bmd42Bone mineral density QTL 428.40.0001lumbar vertebra mineral mass (VT:0010511)bone mineral density (CMO:0001226)1171629477216629477Rat
2300187Bmd41Bone mineral density QTL 418.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)1171629477216629477Rat
2293654Bss30Bone structure and strength QTL 3032.650.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1171629477216629477Rat
2293673Bss27Bone structure and strength QTL 2718.630.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)1171629477216629477Rat
2293677Bss41Bone structure and strength QTL 419.380.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra cross-sectional area (CMO:0001689)1171629477216629477Rat
1549830Bss1Bone structure and strength QTL 14.8femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)1172609619217609619Rat
61326Eae6Experimental allergic encephalomyelitis QTL 65.3body mass (VT:0001259)change in body weight (CMO:0002045)1172949660181830018Rat
631214Bw61Body weight QTL613.40.0001intramuscular adipose amount (VT:0010044)intramuscular fat area (CMO:0001162)1173108781218108781Rat
631670Iddm10Insulin dependent diabetes mellitus QTL 101.9blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1174133260196383635Rat
70163Bw20Body weight QTL 205.1body mass (VT:0001259)body weight (CMO:0000012)1174133260219133260Rat
738032Hcas5Hepatocarcinoma susceptibility QTL 53.12liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1176426412257976495Rat
1600380Niddm70Non-insulin dependent diabetes mellitus QTL 703.10.0008blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)1176550523221550523Rat
10059600Bp378Blood pressure QTL 3783.080.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1176869060221869060Rat
1354624Cm35Cardiac mass QTL355.7heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1177227632256448636Rat
1354652Kidm20Kidney mass QTL 204.3kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1177227632256448636Rat
1558658Bw59Body weight QTL 593.50.0003body mass (VT:0001259)body weight (CMO:0000012)1178784622223784622Rat
2325727Pia41Pristane induced arthritis QTL 41joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1178810256180814005Rat
2325725Eae31Experimental allergic encephalomyelitis QTL 31nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)1178810256188377506Rat
634321Hc1Hypercalciuria QTL 12.91urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1178810256240830002Rat
1578763Kidm29Kidney mass QTL 293.30.0001kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1179567751260522016Rat
1302787Stl25Serum triglyceride level QTL 252.70.0073blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)1180359209210702199Rat
6903303Scl34Serum cholesterol QTL 342.50.0033blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)1180359209218108781Rat
737977Bp160Blood pressure QTL 1600.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1181133855226133855Rat
61378Bp43Blood pressure QTL 4322.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1181746937196383635Rat
724559Pancm1Pancreatic morphology QTL 17.1islet of Langerhans morphology trait (VT:0005215)pancreatic islet damage composite score (CMO:0001156)1181759564214537555Rat
2293083Iddm25Insulin dependent diabetes mellitus QTL 254.18blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1181829673224569684Rat
634312Bp143Blood pressure QTL 14330.0002arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1182623426219932796Rat
8655655Arrd2Age-related retinal degeneration QTL 27.79retinal layer morphology trait (VT:0003727)percentage of study population developing retinopathy during a period of time (CMO:0002453)1183970203243914901Rat
8655855Arrd3Age-related retinal degeneration QTL 33.07lens clarity trait (VT:0001304)cataract incidence/prevalence measurement (CMO:0001585)1183970203243914901Rat
631838Niddm36Non-insulin dependent diabetes mellitus QTL 360.01insulin secretion trait (VT:0003564)calculated pancreatic islet insulin release measurement (CMO:0001217)1184550676229550676Rat
1300145Rf7Renal function QTL 72.96urine creatinine amount (VT:0010540)urine creatinine level (CMO:0000125)1185145134221264292Rat
1359018Hrtrt20Heart rate QTL 203.08heart pumping trait (VT:2000009)heart rate (CMO:0000002)1185356336202902618Rat
2312564Glom18Glomerulus QTL 182.40.003kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)1185356336231689108Rat
1582206Kidm33Kidney mass QTL 336.9kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)1188377360224054420Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general number of animals used:794 10th and 465 12th generation of advanced intercross lines 2324646
qtl_general this region shows linkage to Eae, Pia, anti-MOG and levels of tumor necrosis factor and interleukin-6 2324646
qtl_general inducing agent: myelin oligodendrocyte glycoprotein aa1-125 2324646
qtl_general measurement method: after induction, animals were monitored and weighed daily beginning on day 7 p.i. until sacrificed 31-38 days, for changes in weight and for clinical signs of paresis/paralysis which were scored on a scale from 0-5; blood samples were taken and levels of MOG antibodies, IgG2b, IgG1 and total IgG determined by ELISA 2324646
qtl_map spans 10 Mb 2324646