Coatc2 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Coatc2 (Coat color QTL 2) Rattus norvegicus

Symbol: Coatc2
Name: Coat color QTL 2
RGD ID: 2324617
Trait: coat/hair pigmentation trait   (VT:0010463)    
Measurement Type: pigmented coat/hair area to total coat/hair area ratio   (CMO:0001810)    
LOD Score: Dorsal LRS=22.5, Total LRS=355.3
P Value: 0.001
Variance: 90.0
Inheritance Type: recessive
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21430,767,025 - 39,153,750RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01433,039,912 - 61,783,215RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01432,833,464 - 61,886,417RGDRnor5.0
RGSC_v3.41433,039,698 - 41,707,592RGDRGSC3.4
Cross Type: intercross
Strains Crossed: BN/SsNSlc LEA/Tj 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Vertebrate Trait

Rat Strain
BN/SsNSlc  (IEA)
LEA/Tj  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Genetic analysis of modifiers for the hooded phenotype in the rat. Torigoe D, etal., Jpn J Vet Res. 2010 Feb;57(4):175-84.
Related QTLs

Related QTL Description Reference
Coatc4 interacts with RGD:2317982


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
61856Gabra2gamma-aminobutyric acid type A receptor subunit alpha 2143709699537230030Rat
3284Pdgfraplatelet derived growth factor receptor alpha143300583833054347Rat
620066Paicsphosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase143119908631232731Rat
2965Kdrkinase insert domain receptor143221787132261018Rat
68388Nmuneuromedin U143184456431872196Rat
2649Gabrb1gamma-aminobutyric acid type A receptor subunit beta1143606872536548946Rat
620973Tectec protein tyrosine kinase143535255135461585Rat
620568KitKIT proto-oncogene receptor tyrosine kinase143254745932624694Rat
621670Gabra4gamma-aminobutyric acid type A receptor subunit alpha 4143659078236667724Rat
621732Gabrg1gamma-aminobutyric acid type A receptor subunit gamma 1143739621737469606Rat
621069RestRE1-silencing transcription factor143085910930879828Rat
620271Clockclock circadian regulator143190854231992673Rat
620237Ppatphosphoribosyl pyrophosphate amidotransferase143121574131250144Rat
1304939Exoc1exocyst complex component 1143161153631659920Rat
621841HopxHOP homeobox143105591231082909Rat
1303337Arl9ADP-ribosylation factor like GTPase 9143115758531166803Rat
621815Cnga1cyclic nucleotide gated channel subunit alpha 1143556694735605065Rat
1305521Gnpda2glucosamine-6-phosphate deaminase 2143852066338538713Rat
727972Zar1zygote arrest 1143519344635197382Rat
735208Spata18spermatogenesis associated 18143453193134558671Rat
1303099Rasl11bRAS-like family 11 member B143401492434019146Rat
1306094Lrrc66leucine rich repeat containing 66143458131834604534Rat
1309278Chic2cysteine-rich hydrophobic domain 2143315766933192015Rat
1308828Srd5a3steroid 5 alpha-reductase 3143204641532060796Rat
1308159Lnx1ligand of numb-protein X 1143351442933617086Rat
1311593Slain2SLAIN motif family, member 2143523603435314186Rat
1310422Dcun1d4defective in cullin neddylation 1 domain containing 4143465272334733122Rat
1333995Olr1604-psolfactory receptor pseudogene 1604143627382136274693Rat
1311135Aasdhaminoadipate-semialdehyde dehydrogenase143125501931281802Rat
1310726Cep135centrosomal protein 135143153053831595718Rat
1310766Yipf7Yip1 domain family, member 7143857104538599070Rat
1310774Guf1GTP binding elongation factor GUF1143853795338557331Rat
1311575Cracdcapping protein inhibiting regulator of actin dynamics143128406631520103Rat
1306201Igfbp7insulin-like growth factor binding protein 7143073741430797317Rat
1309477Polr2bRNA polymerase II subunit B143079722830834916Rat
1306481TxkTXK tyrosine kinase143546336935519448Rat
1311309FrylFRY like transcription coactivator143495662335189738Rat
1310092Nipal1NIPA-like domain containing 1143553764135561651Rat
1310958Cwh43cell wall biogenesis 43 C-terminal homolog143475427934800530Rat
1309536Slc10a4solute carrier family 10, member 4143519850935203729Rat
1308047Gsx2GS homeobox 2143312379933126151Rat
1309336Fip1l1factor interacting with PAPOLA and CPSF1143361521033675742Rat
1305402Commd8COMM domain containing 8143604904036059617Rat
1306983Tmem165transmembrane protein 165143199348932018717Rat
1564808Usp46ubiquitin specific peptidase 46143415005534219227Rat
1564787Srp72signal recognition particle 72143116817531195717Rat
1562708Scfd2sec1 family domain containing 2143368334834008232Rat
1302956Spink2serine peptidase inhibitor, Kazal type 2143096768230974326Rat
1359201Nfxl1nuclear transcription factor, X-box binding-like 1143562608635667505Rat
1312020Kctd8potassium channel tetramerization domain containing 8143877327439018182Rat
727887Corincorin, serine peptidase143568060135910703Rat
1359549Ociad1OCIA domain containing 1143489785134915291Rat
1562571Thegltheg spermatid protein-like143111010431152487Rat
1359460Noa1nitric oxide associated 1143083501230851296Rat
1592952Anp32a-ps2acidic nuclear phosphoprotein 32 family member A, pseudogene 2143579579935798154Rat
1592953Gpx4-ps3glutathione peroxidase 4, pseudogene 3143533811035338759Rat
1588541Atp10dATPase phospholipid transporting 10D (putative)143591172836012549Rat
1559712Pdcl2phosducin-like 2143187456331895272Rat
1594181Hspd1-ps4heat shock protein family D (Hsp60) member 1, pseudogene 4143897226638974496Rat
1591303Exoc1lexocyst complex component 1 like143167344231698605Rat
1598162Snrpd2-ps1small nuclear ribonucleoprotein D2 polypeptide, pseudogene 1143263628032636653Rat
1597128Wbp11-ps2WW domain binding protein 11, pseudogene 2143429733934299886Rat
1594202Sgcbsarcoglycan, beta143456361434578614Rat
2319120Cox7b2cytochrome c oxidase subunit 7B2143669309636805323Rat
2319541Ociad2OCIA domain containing 2143487366834889276Rat
2322951LOC100363494ubiquitin B-like143431294934313236Rat
2323837Eif5-ps2eukaryotic translation initiation factor 5, pseudogene 2143481029534812256Rat
6489076Dancrdifferentiation antagonizing non-protein coding RNA143412695634127936Rat
7498730LOC102551532uncharacterized LOC102551532143089262630894920Rat
7501116Rbbp4-ps3RB binding protein 4, chromatin remodeling factor, pseudogene 3143315264933153949Rat
7540659LOC102554412uncharacterized LOC102554412143404969034058012Rat
7520032LOC102556008uncharacterized LOC102556008143175176431829013Rat
7632687LOC102552854uncharacterized LOC102552854143124780131255151Rat
7564466LOC102554514uncharacterized LOC102554514143416173934171159Rat
7684935LOC102551595uncharacterized LOC102551595143101355731025555Rat
7714547LOC102550273synaptonemal complex central element protein 2-like143580073535802489Rat
9438180LOC103692822uncharacterized LOC103692822143456039134563548Rat
11355448LOC108352740uncharacterized LOC108352740143195842231975843Rat
11362928LOC108352851uncharacterized LOC108352851143433385834338439Rat
11432042LOC108352735uncharacterized LOC108352735143097803930982711Rat
11387368LOC108352742uncharacterized LOC108352742143442022134447174Rat
11508820LOC10835274340S ribosomal protein S2 pseudogene143593582335936668Rat
41111789LOC120096875U6 spliceosomal RNA143096060030960706Rat
41234281LOC120096530uncharacterized LOC120096530143274985732751927Rat
41089551LOC120096599uncharacterized LOC120096599143709156937096980Rat
41386864LOC120096772U7 small nuclear RNA143795682137956881Rat
41094989LOC120096729uncharacterized LOC120096729143077506730780888Rat
41176151Rpl7-ps23ribosomal protein L7, pseudogene 23143878280338783597Rat
41344346LOC120096595uncharacterized LOC120096595143327727833278438Rat
41216070LOC120096807small nucleolar RNA SNORA17143861569838615827Rat
41345606LOC120096529uncharacterized LOC120096529143235515232357606Rat
41396352LOC120096731uncharacterized LOC120096731143098967430995959Rat
41347535LOC120096823small nucleolar RNA SNORA17143847900538479130Rat
41070370LOC120096752U6 spliceosomal RNA143764334437643450Rat
41219020LOC120096733uncharacterized LOC120096733143107643331077597Rat
41230065LOC120096744U6 spliceosomal RNA143394732233947428Rat
41131698NEWGENE_40933816transfer RNA valine (anticodon AAC)143696361536963687Rat
41110000LOC120096756U6 spliceosomal RNA143263823932638343Rat
40997259LOC120096596uncharacterized LOC120096596143402127934025049Rat
40997548LOC120096598uncharacterized LOC120096598143612390036162244Rat
40947943LOC120096732uncharacterized LOC120096732143105623431060971Rat
40926311LOC120096533uncharacterized LOC120096533143804510538050006Rat
40932403Rpl23a-ps19ribosomal protein L23a, pseudogene 19143143224731432742Rat
40961482LOC120096737uncharacterized LOC120096737143119032931195581Rat
40990623NEWGENE_40973998transfer RNA histidin (anticodon AUG)143520503235205104Rat
40943998LOC120096724uncharacterized LOC120096724143159528931623397Rat
40995005LOC120096743U6 spliceosomal RNA143769257737692683Rat
41244228LOC120096831small nucleolar RNA SNORA26143412764034127760Rat
41313716LOC120096736uncharacterized LOC120096736143131369431338837Rat
41027913LOC120096594uncharacterized LOC120096594143188221031884883Rat
41029313Myl6-ps3myosin light chain 6, pseudogene 3143602148036043186Rat
41255002LOC120096597uncharacterized LOC120096597143540854835410632Rat
41292566LOC120096532uncharacterized LOC120096532143484139934843213Rat
41059665Ndufa5-ps3NADH:ubiquinone oxidoreductase subunit A5, pseudogene 3143294983932950212Rat
41335138LOC120096735uncharacterized LOC120096735143116489631171639Rat
41044971LOC120096534uncharacterized LOC120096534143848770738491128Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
33692D14Mit12140143766971937669857Ratregion
33772D14Mit3100143333435333334448Ratregion
36287D14Rat12153143915358139153750Ratregion
35465D14Rat13125143258323832583345Ratregion
37124D14Rat14200143115335031153547Ratregion
37136D14Rat105237143295352432953740Ratregion
34965D14Rat10176143088377730883947Ratregion
35713D14Rat11172143905723739057404Ratregion
40712D14Rat83228143107177431072011Ratregion
38408D14Rat65129143404961034049719Ratregion
38932D14Rat36145143076702530767156Ratregion
39042D14Rat52135143482377234823917Ratregion
43016D14Rat117126143168038331680527Ratregion
41018D14Rat84115143247312332473250Ratregion
41790D14Rat106245143220763432207871Ratregion
45174D14Got43134143439149434391628Ratregion
45175D14Got41128143210261632102744Ratregion
45176D14Got40244143289876132899005Ratregion
45177D14Got42253143397854533978795Ratregion
45182D14Got52157143904498239045139Ratregion
45183D14Got54273143889819738898470Ratregion
45184D14Got55118143848665038486768Ratregion
60069D14Got57230143878170238781930Ratregion
625816D14Got56150143889818238898332Ratregion
625820D14Got90190143515928435159474Ratregion
60063D14Got44153143544203235442185Ratregion
60064D14Got45126143501109535011221Ratregion
738058D14Hmgc7216143626908236269300Ratregion
66575D14Mco7338143755162137551970Ratregion
1630300D14Got101124143275666532756789Ratregion
1628668D14Wox20184143305582933056013Ratregion
1641546D14Got102197143482371234823909Ratregion
1634903D14Got119193143552646435526657Ratregion
5036007PMC84675P1646143086409030864736Ratregion
5037051RH36296127143287500032875127Ratregion
5034153RH141568200143124966031249860Ratregion
5028793RH142349150143519009635190246Ratregion
5028867RH142631195143455675434556950Ratregion
5029311RH144316158143342901033429168Ratregion
5032119RH94451156143300612933006285Ratregion
5026810RH133620216143605920436059420Ratregion
5026864RH133820209143452947534529684Ratregion
5027293AW557942109143489789934898008Ratregion
5032815RH135403185143079371230793897Ratregion
5033017RH137289187143533843335338615Ratregion
5025000AU022345228143085095930851187Ratregion
5033279RH138249164143680509536805259Ratregion
5025326RH127888187143119920331199390Ratregion
5033487RH139013127143470433934704466Ratregion
5025774RH129612213143853845238538665Ratregion
5028261D5Mit306241143127548831275729Ratregion
5051390M86567121143722832137228442Ratregion
5056341RH144322172143666746336667635Ratregion
5054117RH143040134143607093836071072Ratregion
5055055RH143580112143421894734219059Ratregion
5058012BF386462187143430156234301749Ratregion
5055823RH144023264143540996635410230Ratregion
5058692BE102309169143416396234164131Ratregion
5052273M84607174143300869233008866Ratregion
5058916BF387243175143115763031157805Ratregion
5059036BF393957130143119704031197170Ratregion
5052961RH142374164143551629635516460Ratregion
5052965RH142376176143853829838538474Ratregion
5053287RH142561104143746936037469464Ratregion
5053471RH142668209143198651731986726Ratregion
5052857RH142314174143558940035590305Ratregion
5051627U14418107143608060636080713Ratregion
5051757RH94641171143226081232260983Ratregion
5051769RH94648153143608041236080565Ratregion
5051092RH134435206143457828734578493Ratregion
5041690RH129002187143591184835912035Ratregion
5040966RH128586219143226062532260844Ratregion
5044648RH130724209143361474133614950Ratregion
5046420RH131742191143553787935538070Ratregion
5044458RH130614194143421746334217656Ratregion
5046540RH131812216143361609333616655Ratregion
5049172RH133327185143204654732046732Ratregion
5047962RH132629191143489787634898067Ratregion
5049012RH133235189143193026831930457Ratregion
5048048RH132678203143457748934577692Ratregion
5049354RH133432196143085094730851143Ratregion
5049398RH133458184143163101631631200Ratregion
5047302RH132249203143128426431284467Ratregion
5048504RH132941180143859879038598970Ratregion
5042422RH129425157143119920331199360Ratregion
5039990RH128025187143199364731993834Ratregion
5043696RH130174169143161159431611763Ratregion
5071926RH135365189143414740834147597Ratregion
5072036RH135428197143560468335604880Ratregion
5072396RH136825250143361791533618780Ratregion
5076506RH139215174143080232330803044Ratregion
5074474RH138038152143901785539018007Ratregion
5076000RH138919164143668587636686040Ratregion
5076638RH139292133143419425934194392Ratregion
5078170RH140184216143475428834754504Ratregion
5078284RH140250197143523705735237254Ratregion
5079916RH141277216143128626631286482Ratregion
5080036RH141346180143546115835461338Ratregion
5080096RH141380200143562784435628044Ratregion
5070644RH134622198143359637633596574Ratregion
5073034RH137196180143465279134652971Ratregion
5079304RH140904220143119911531199335Ratregion
5073510RH137478213143197412031974333Ratregion
5070678RH134641193143198999531990188Ratregion
5073424RH137428208143355625033556459Ratregion
5071492RH135113180143591041835910597Ratregion
5061838AW533807152143723329337233445Ratregion
5068886AU046864229143348525133485483Ratregion
5068996AU046793201143167580331676008Ratregion
5070496Gsh2282143312583533126117Ratregion
5060272AW531051184143131534231315526Ratregion
5062002AI454088144143199234531992489Ratregion
5063652BE107907170143498865034988820Ratregion
5065316BE121426203143709332737093530Ratregion
5060674BE098844183143162111131621298Ratregion
5063820AW535324176143198891731989093Ratregion
5060204AI072690192143472051534720707Ratregion
5063528BF404311215143115763031157845Ratregion
5063562BI289920104143394297733943081Ratregion
5064532BF399306173143163963431639807Ratregion
5061240BE111373150143401749534017645Ratregion
5064708BE108365173143086088730861060Ratregion
5061610AA875648157143108270331082860Ratregion
5087052BM389183198143097044330970641Ratregion
5087552PMC312758P2177143121618331216360Ratregion
5089937AU049453267143438734934387616Ratregion
5089313AU049082185143096738430967569Ratregion
5083705AI009635205143421680934217014Ratregion
5088395AU048544264143223407932234343Ratregion
5088989AU048888125143549544735495572Ratregion
5082669BE119975196143160720431607400Ratregion
5083621BI276488217143198877431988991Ratregion
5507632D5Buc331172143660493536606107Ratregion
5507634UniSTS:1426321417143377449733775914Ratregion
5505030Gpx40143533811235338614Ratregion
5506047UniSTS:498239426143254805132548477Ratregion
5506931G54151167143198999231990159Ratregion
5499885UniSTS:235197252143591178135912033Ratregion
5501508D14S2921064143197739531978459Ratregion
5502881Gabrb1693143608043536081128Ratregion
6484686D14Uwm14262143161416631614428Ratregion
6480636D14Uwm1140143170701131707201Ratregion
6480638D14Uwm2220143367787733678087Ratregion
6480641D14Uwm3298143354871033549008Ratregion
6480643D14Uwm4240143247190232472125Ratregion
6484235D14Uwm5190143351459933514760Ratregion
6484237D14Uwm6389143355010433550483Ratregion
6484239D14Uwm7240143195765831957909Ratregion
6484241D14Uwm8300143237430032374766Ratregion
6484241D14Uwm8300143237447032374766Ratregion
6484243D14Uwm9210143275661332756819Ratregion
6484245D14Uwm10220143293431632934528Ratregion
6484247D14Uwm11190143309750833097688Ratregion
Position Markers

Flank 1: (D14Rat36)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21430,767,025 - 30,767,156 (+)MAPPER
Rnor_6.01433,039,912 - 33,040,042NCBI
Rnor_5.01432,833,464 - 32,833,594UniSTS
RGSC_v3.41433,039,810 - 33,039,940UniSTS
RGSC_v3.41433,039,698 - 33,040,140RGD
RGSC_v3.11433,039,810 - 33,039,940RGD
Celera1430,086,651 - 30,086,781UniSTS
RH 3.4 Map14391.5RGD
RH 3.4 Map14391.5UniSTS
RH 2.0 Map14364.6RGD
SHRSP x BN Map1419.2999RGD
FHH x ACI Map1426.22RGD
Cytogenetic Map14p11UniSTS
Peak: (D14Got40)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21432,898,761 - 32,899,005 (+)MAPPER
Rnor_6.01435,421,864 - 35,422,107NCBI
Rnor_5.01435,250,125 - 35,250,368UniSTS
RGSC_v3.41435,259,715 - 35,259,959RGD
RGSC_v3.41435,259,716 - 35,259,959UniSTS
RGSC_v3.11435,259,716 - 35,259,959RGD
Celera1432,176,362 - 32,176,605UniSTS
RH 3.4 Map14431.89UniSTS
RH 3.4 Map14431.89RGD
RH 2.0 Map14400.6RGD
Flank 2: (D14Rat12)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21439,153,581 - 39,153,750 (-)MAPPER
Rnor_6.01461,783,047 - 61,783,215NCBI
Rnor_5.01461,886,249 - 61,886,417UniSTS
RGSC_v3.41441,707,423 - 41,707,592RGD
RGSC_v3.41441,707,424 - 41,707,592UniSTS
RGSC_v3.11441,709,814 - 41,709,983RGD
Celera1438,346,383 - 38,346,551UniSTS
RH 2.0 Map14500.7RGD
SHRSP x BN Map1427.1799RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
619619Rf4Renal disease susceptibility QTL 44.10.002total urine protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)14132754612Rat
634352Apr6Acute phase response QTL 63.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)14141131407Rat
1331740Bw26Body weight QTL 263.028body mass (VT:0001259)body weight (CMO:0000012)14381307430767156Rat
1581500Renag1Renal agenesis QTL 1kidney development trait (VT:0000527)percentage of study population developing unilateral renal agenesis during a period of time (CMO:0000940)14817066868298175Rat
1358296Ael3Aortic elastin QTL 33.70.00051aorta elastin amount (VT:0003905)aortic elastin14826709053267090Rat
2302045Pia39Pristane induced arthritis QTL 394.90.001blood immunoglobulin amount (VT:0002460)serum immunoglobulin G2a level (CMO:0002116)14826709053267090Rat
731183Pia20Pristane induced arthritis QTL 203.55joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)14908897839057237Rat
631839Niddm37Non-insulin dependent diabetes mellitus QTL 373.37blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)141103062295876975Rat
1300140Srn3Serum renin concentration QTL 33.19blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)141487516830883947Rat
71117Niddm17Non-insulin dependent diabetes mellitus QTL 172.35blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)141759376142336881Rat
631262Tcas4Tongue tumor susceptibility QTL 47.29tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)141762256142337007Rat
2313397Coatc1Coat color QTL1coat/hair pigmentation trait (VT:0010463)coat/hair color measurement (CMO:0001808)141854133263541332Rat
61420Pia6Pristane induced arthritis QTL 64.9joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)141863134542337007Rat
10755459Coatc15Coat color QTL 150.01681coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)141983694464836944Rat
70187Pancm5Pancreatic morphology QTL 516.7pancreas mass (VT:0010144)pancreas weight to body weight ratio (CMO:0000630)143032009280829842Rat
2324617Coatc2Coat color QTL 20.001coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)143076702539153750Rat
1300154Bp189Blood pressure QTL 1893.04arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)143088377768757901Rat
2313048Bss84Bone structure and strength QTL 843.10.0001tibia strength trait (VT:1000284)tibia total energy absorbed before break (CMO:0001736)143766971982669719Rat
2313084Bss83Bone structure and strength QTL 832.90.0001tibia size trait (VT:0100001)tibia midshaft endosteal cross-sectional area (CMO:0001716)143766971982669719Rat
2313089Bss81Bone structure and strength QTL 813.40.0001body length (VT:0001256)body length, nose to rump (CMO:0000079)143766971982669719Rat
2313100Bss82Bone structure and strength QTL 8230.0001tibia size trait (VT:0100001)tibia midshaft cross-sectional area (CMO:0001717)143766971982669719Rat
738037Hcas6Hepatocarcinoma susceptibility QTL 62.93liver integrity trait (VT:0010547)liver nonremodeling tumorous lesion volume to total liver volume ratio (CMO:0001464)143905723783368335Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general software used: Map Maker QTXb20 2317982
qtl_general number of animals used: 152 F2 animals 2317982
qtl_general measurement method: Dorsal and ventral sides were photograhed and pigmented and non-pigmented areas traced manually; percentage of pigmented area calculated (pigmented area/total area X 100) for dorsal, ventral and total body surface 2317982
qtl_statistics Dorsal LRS=22.5, Total LRS=355.3 2317982