Eae27 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Eae27 (Experimental allergic encephalomyelitis QTL 27) Rattus norvegicus

Symbol: Eae27
Name: Experimental allergic encephalomyelitis QTL 27
RGD ID: 2317588
Trait: nervous system integrity trait   (VT:0010566)    
Measurement Type: percentage of study population developing experimental autoimmune encephalomyelitis during a period of time   (CMO:0001047)    
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.24103,194,805 - 112,478,794RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0499,066,972 - 110,635,449RGD_MAPPER_PIPELINERnor6.0
Rnor_5.04163,844,120 - 175,325,053RGDRnor5.0
RGSC_v3.44104,415,992 - 114,074,165RGDRGSC3.4
Cross Type: Not Available
Strains Crossed: DA/ZtmKini PVG.1AV1/Kini 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
# Reference Title Reference Citation
1. Multiple loci comprising immune-related genes regulate experimental neuroinflammation. Marta M, etal., Genes Immun. 2010 Jan;11(1):21-36. Epub 2009 Aug 13.
2. Data registered by Dr. Olsson Personal communication between Dr. Olsson and the RGD curators.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3552Reg1aregenerating family member 1 alpha4110892451110895115Rat
62022Tmsb10thymosin, beta 104105009959105011095Rat
2316Cd8aCD8 subunit alpha4103365804103370041Rat
2317Cd8bCD8 subunit beta4103312596103328523Rat
619998Tmem150atransmembrane protein 150A4104410271104414630Rat
3256Reg3gregenerating family member 3 gamma4110922805110927803Rat
621700Sftpbsurfactant protein B4104359303104368439Rat
620419Vamp5vesicle-associated membrane protein 54104423813104435059Rat
620445Tgoln2trans-golgi network protein 24104663356104671208Rat
620421Vamp8vesicle-associated membrane protein 84104442383104452884Rat
628802Retsatretinol saturase4104653306104662069Rat
68383Ggcxgamma-glutamyl carboxylase4104469737104485631Rat
619821Suclg1succinate-CoA ligase GDP/ADP-forming subunit alpha4105308236105337595Rat
708351Kdm3alysine demethylase 3A4103630907103675073Rat
620586Rnf103ring finger protein 1034103526456103542529Rat
620875St3gal5ST3 beta-galactoside alpha-2,3-sialyltransferase 54104134553104192560Rat
708556Chmp3charged multivesicular body protein 34103576453103622566Rat
3254Reg3bregenerating family member 3 beta4110861775110865015Rat
621401Reg3aregenerating islet-derived 3 alpha4110872398110875157Rat
621797Dnah6dynein, axonemal, heavy chain 64105064123105284361Rat
620824Polr1aRNA polymerase I subunit A4103950051104014022Rat
1305105Smyd1SET and MYND domain containing 14103195330103252989Rat
1306408Elmod3ELMO domain containing 34104614665104653122Rat
1307065Mrpl35mitochondrial ribosomal protein L354103865812103876687Rat
1305060Ctnna2catenin alpha 24109293978110443413Rat
1334150Or6c235-ps1olfactory receptor family 6 subfamily C member 235, pseudogene 14105479255105480121Rat
1308103Usp39ubiquitin specific peptidase 394104373908104406413Rat
1311724Capgcapping actin protein, gelsolin like4104594743104611856Rat
1305230Reep1receptor accessory protein 14103746004103862347Rat
1306495Krcc1lysine-rich coiled-coil 14103261566103274672Rat
1310684Immtinner membrane mitochondrial protein4103880482103919116Rat
1309766Rmnd5arequired for meiotic nuclear division 5 homolog A4103375846103432890Rat
619985Mat2amethionine adenosyltransferase 2A4104489877104495447Rat
1561512Atoh8atonal bHLH transcription factor 84104259992104292168Rat
1359698Rnf181ring finger protein 1814104414586104421433Rat
1311671Tcf7l1transcription factor 7 like 14104680734104846086Rat
1584754Rpl6-ps15ribosomal protein L6, pseudogene 154108858856108967329Rat
1585901Hnrnpc-ps3heterogeneous nuclear ribonucleoprotein C, pseudogene 34107575688107585650Rat
1586002Cactin-ps3cactin, spliceosome C complex subunit, pseudogene 34106867095106868859Rat
1587245Tuba1b-ps8tubulin, alpha 1B, pseudogene 84103340394103341605Rat
1587427Sh2d6SH2 domain containing 64104566210104574176Rat
1562515JkamplJNK1/MAPK8 associated membrane protein like4105520442105521542Rat
1565582Ptcd3Pentatricopeptide repeat domain 34103922440103957445Rat
1585921LRRTM1leucine rich repeat transmembrane neuronal 14109701815109718924Rat
1587471LOC691113hypothetical protein LOC6911134104402553104408317Rat
1586032Shc1-ps1SHC adaptor protein 1, pseudogene 14105988811105991749Rat
1586033Ptbp1-ps3polypyrimidine tract binding protein 1, pseudogene 34105696627105698961Rat
1591490Kcmf1potassium channel modulatory factor 14104888452104950234Rat
2316392Vom1r-ps76vomeronasal 1 receptor pseudogene 764108297905108298689Rat
2319759Tmem94-ps1transmembrane protein 94, pseudogene 14104043649104046004Rat
2319874Reg3b-ps1regenerating family member 3 beta, pseudogene 14110867647110870075Rat
2320349Tra2b-ps2transformer 2 beta, pseudogene 24108405683108421146Rat
2320685Slc25a39-ps8solute carrier family 25 member 39, pseudogene 84107360735107361799Rat
7524413LOC102546367uncharacterized LOC1025463674104166361104168839Rat
7647571LOC102552663uncharacterized LOC1025526634103292937103297980Rat
7639290Phb1-ps4prohibitin 1, pseudogene 44105082392105084201Rat
7562795LOC102549458uncharacterized LOC1025494584104767270104769717Rat
7552576Stxbp3-ps1syntaxin binding protein 3, pseudogene 14111049442111054421Rat
7553872LOC102556495uncharacterized LOC1025564954104131807104134481Rat
7708743LOC102556090uncharacterized LOC1025560904111069839111075961Rat
7688358LOC102556035uncharacterized LOC1025560354110915998110999186Rat
7699711LOC102549526uncharacterized LOC1025495264104672363104687654Rat
7727476LOC102549052low molecular weight phosphotyrosine protein phosphatase-like4103247606103251384Rat
11355186LOC108350864ATP synthase subunit g, mitochondrial pseudogene4104555149104555540Rat
11468430Trnas-gcu6transfer RNA serine (anticodon GCU) 64106831010106831091Rat
11472949LOC108350866uncharacterized LOC1083508664105957318105981816Rat
11385872LOC108350868glyceraldehyde-3-phosphate dehydrogenase pseudogene4110616441110617544Rat
11402703Rpl27a-ps5ribosomal protein L27a,pseudogene 54108745019108755613Rat
41321497LOC120102565U6 spliceosomal RNA4109168372109168478Rat
41323307LOC120102777U4 spliceosomal RNA4105038037105038123Rat
41323577LOC120102314uncharacterized LOC1201023144111407391111454991Rat
41141586LOC120102311uncharacterized LOC1201023114105288960105294181Rat
41358316LOC120102632small nucleolar RNA SNORA36 family4104895641104895763Rat
41172269LOC120102644U11 spliceosomal RNA4110662076110662209Rat
41116383LOC120102170thymosin beta-10-like4104962532104963461Rat
41389009LOC120102554U4 spliceosomal RNA4105248170105248327Rat
41176189LOC120102561U6 spliceosomal RNA4104156903104157009Rat
41096961LOC120102643small nucleolar RNA SNORA514111475412111475543Rat
41121066Fam50a-ps1family with sequence similarity 50, member A, pseudogene 14106608389106609566Rat
41177686LOC120102309uncharacterized LOC1201023094104285634104289300Rat
41156854Snord94small nucleolar RNA, C/D box 944103924328103924464Rat
41103026Atp5mg-ps11ATP synthase membrane subunit g, pseudogene 114108818020108821027Rat
41159196LOC120102709small nucleolar RNA SNORA174111773083111773205Rat
41291582Npm1-ps6nucleophosmin 1, pseudogene 64108791940108792947Rat
41373605LOC120102663small nucleolar RNA SNORA174106494538106494669Rat
41229891LOC120102544uncharacterized LOC1201025444108434706108534978Rat
41083750LOC120102310uncharacterized LOC1201023104104988896104994531Rat
41109258Trnap-agg74transfer RNA proline (anticodon AGG) 744104598962104599042Rat
40952747Trnas-aga32transfer RNA serine (anticodon AGA) 324103396425103396498Rat
40933947LOC120102313uncharacterized LOC1201023134108573617108627858Rat
40934091Trnaa-agctransfer RNA alanine (anticodon AGC)4103258388103258469Rat
41048538LOC120102701U1 spliceosomal RNA4108539249108539412Rat
41247803LOC120102720small nucleolar RNA SNORA174108118729108118852Rat
41152181LOC120102169uncharacterized LOC1201021694104098343104105838Rat
41062867LOC120102308uncharacterized LOC1201023084104292221104321842Rat
41016841LOC120102668U1 spliceosomal RNA4111394809111394970Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10525D4Mit311244108086268108086390Ratregion
10560D4Mit121794103194805103194984Ratregion
10561D4Wox201444103194798103194942Ratregion
10562D4Arb212804103194656103194936Ratregion
11229D4Wox281374110891355110891492Ratregion
33991D4Mit282204110275411110275633Ratregion
39916D4Rat1752114105220727105220938Ratregion
38682D4Rat972234109588035109588254Ratregion
39990D4Rat1772014112478605112478794Ratregion
40014D4Rat2332244107032553107032773Ratregion
42708D4Rat2322004103760884103761084Ratregion
42709D4Rat2672304105530657105530888Ratregion
44796D10Got1171704110341308110341478Ratregion
62485D4Uia32534105163260105163513Ratregion
66675D4Mco5904104582988104583088Ratregion
1627849D4Got2201374108940344108940481Ratregion
1629067D4Got2732004105320244105320446Ratregion
1629971D4Got270984104066468104066566Ratregion
1640808D4Got3002004104650470104650670Ratregion
1640808D4Got3002004104650470104650789Ratregion
1641036D4Got3141714105154820105154991Ratregion
1640465D4Got3041914105406723105406914Ratregion
1640717D3Got2381594105423350105423389Ratregion
1635065D4Got2801494108087467108087616Ratregion
1635939D4Got2182704109443598109443868Ratregion
1636730D4Ulb21974111948800111948999Ratregion
1637210D4Got2642194105855955105856174Ratregion
1637318D4Got2142064107879866107880072Ratregion
5038648AU024348914103378720103378811Ratregion
5034057RH1411981864104423930104424116Ratregion
5034069RH1412421824104666144104666326Ratregion
5034247RH1419211804104668969104669149Ratregion
5026702RH1332071924104474837104475029Ratregion
5026750RH1333891814104115084104115265Ratregion
5032373AI4618941504104408038104408188Ratregion
5027315AW146237804103542382103542462Ratregion
5029903BE0976591534104495693104495846Ratregion
5033299RH1383221724103939969103940141Ratregion
5025500RH1285611874103866780103866967Ratregion
5025914RH1301842204110864764110864984Ratregion
5057686BE1013431664104373048104373214Ratregion
5055599RH1438941784105352984105353162Ratregion
5056193RH1442372714105742105105742376Ratregion
5052983RH1423862004103376147103376347Ratregion
5053075RH1424391714104368194104368365Ratregion
5050522RH1341051884104614724104614912Ratregion
5041820RH1290771804105317070105317250Ratregion
5041902RH1291252074104421326104421533Ratregion
5044886RH1308602064104373961104374167Ratregion
5045772RH1313702144104192190104192412Ratregion
5046108RH1315631884103275625103275813Ratregion
5044930RH1308852184109894954109895172Ratregion
5044934RH1308871824103623614103623796Ratregion
5047986RH1326431924109294322109294514Ratregion
5048076RH1326941984103922575103922773Ratregion
5049396RH1334571874104562968104563155Ratregion
5049396RH1334571874104562968104563155Ratregion
5042326RH1293701914103375882103376073Ratregion
5039330RH1276442174110875666110875883Ratregion
5040048RH1280591864104407988104408174Ratregion
5041536RH1289131864110894873110895059Ratregion
5075800RH1388042334103917425103917658Ratregion
5077132RH1395791974104013721104013918Ratregion
5078648RH1404661164104485354104485470Ratregion
5080044RH1413511864104260011104260197Ratregion
5079006RH1406792134104424094104425000Ratregion
5080354RH1415312094103638292103638501Ratregion
5070960RH1348062174104131957104132174Ratregion
5070594RH1345921944103542071103542265Ratregion
5073086RH1372281594103379672103379831Ratregion
5067802AU0475272094107404727107404936Ratregion
5068622AU0470342054105796841105797046Ratregion
5068926AU0468381414106747555106747698Ratregion
5069342AU0465601554103635296103635448Ratregion
5060772BF401081964103906996103907092Ratregion
5063058BF4102282014103913279103913480Ratregion
5064804BE1085442024104418218104418420Ratregion
5086157BM3861001574104566293104566450Ratregion
5087584PMC34520P13904104361112104361502Ratregion
5088917AU0488461674105848880105849047Ratregion
5084030AI1753481684103862098103862266Ratregion
5090095AU0495471084106327079106327187Ratregion
5087811D6Wsu157e1614104373956104374117Ratregion
5090513AU0497962784110133169110133447Ratregion
5081358AA9238812124104414640104414852Ratregion
5090161AU0495872184103344415103344633Ratregion
5090215AU0496192734103635251103635521Ratregion
5504410PMC196074P22324104291604104291836Ratregion
5504867ha27071884106209232106209420Ratregion
5506140UniSTS:498461704104606177104606247Ratregion
5499517stSG61060504111297395111297655Ratregion
5502030MARC_24177-24178:1033563974:16594103541402103542061Ratregion
Position Markers

Flank 1: (D4Mit12)
Rat AssemblyChrPosition (strand)Source
mRatBN7.24103,194,805 - 103,194,984 (+)MAPPER
Rnor_6.0499,066,972 - 99,067,150NCBI
Rnor_5.04163,844,120 - 163,844,298UniSTS
RGSC_v3.44104,415,992 - 104,416,171RGD
RGSC_v3.44104,415,993 - 104,416,171UniSTS
RGSC_v3.14104,660,473 - 104,660,652RGD
Celera492,370,739 - 92,370,917UniSTS
SHRSP x BN Map448.75UniSTS
SHRSP x BN Map448.75RGD
FHH x ACI Map460.18RGD
Cytogenetic Map4q32UniSTS
Peak: (D4Rat233)
Rat AssemblyChrPosition (strand)Source
mRatBN7.24107,032,553 - 107,032,773 (+)MAPPER
Rnor_6.04105,383,808 - 105,384,025NCBI
Rnor_5.04170,105,520 - 170,105,737UniSTS
RGSC_v3.44108,329,231 - 108,329,449RGD
RGSC_v3.44108,329,232 - 108,329,449UniSTS
RGSC_v3.14108,573,644 - 108,574,059RGD
Celera496,126,073 - 96,126,329UniSTS
SHRSP x BN Map448.75UniSTS
SHRSP x BN Map448.75RGD
Flank 2: (D4Rat177)
Rat AssemblyChrPosition (strand)Source
mRatBN7.24112,478,605 - 112,478,794 (+)MAPPER
Rnor_6.04110,635,261 - 110,635,449NCBI
Rnor_5.04175,324,865 - 175,325,053UniSTS
RGSC_v3.44114,073,976 - 114,074,165RGD
RGSC_v3.44114,073,977 - 114,074,165UniSTS
RGSC_v3.14114,318,457 - 114,318,646RGD
Celera4101,488,704 - 101,488,892UniSTS
SHRSP x BN Map449.83RGD
SHRSP x BN Map449.83UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
2303168Bp330Blood pressure QTL 3304.250.017arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)45214602146446691Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)411320076180699135Rat
12798520Anxrr55Anxiety related response QTL 554.450.01locomotor behavior trait (VT:0001392)number of rearing movements with lid-pushing in an experimental apparatus (CMO:0002715)432583980114627242Rat
8655961Kidm43Kidney mass QTL 4318kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)436303261103194984Rat
1358352Srcrt3Stress Responsive Cort QTL 32.29blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)438465774146803430Rat
1300139Hrtrt6Heart rate QTL 62.85heart pumping trait (VT:2000009)heart rate (CMO:0000002)439524264116179656Rat
1576305Emca6Estrogen-induced mammary cancer QTL 65.8mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)444463720155883716Rat
1354612Foco1Food consumption QTL 18.87eating behavior trait (VT:0001431)food intake rate (CMO:0000427)444463908148090542Rat
1354660Salc1Saline consumption QTL 111.26drinking behavior trait (VT:0001422)saline drink intake rate (CMO:0001627)444463908148090542Rat
2312567Glom19Glomerulus QTL 191.90.006kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)445456990146803430Rat
1298082Stresp4Stress response QTL 4blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)450119848146803430Rat
70200Alc18Alcohol consumption QTL 189.2drinking behavior trait (VT:0001422)ethanol intake volume to total fluid intake volume ratio (CMO:0001591)456647873149491524Rat
1641833Alc21Alcohol consumption QTL 218.60.0001drinking behavior trait (VT:0001422)ethanol drink intake rate (CMO:0001407)456698790126192555Rat
738009Sach4Saccharine consumption QTL 44.90.000016consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)459948935154902892Rat
738016Alc16Alcohol consumption QTL 163.60.00015consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)459948935154902892Rat
738031Alc14Alcohol consumption QTL 147.60.00003consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)459948935154902892Rat
1578657Bss12Bone structure and strength QTL 128.9femur morphology trait (VT:0000559)femoral neck cross-sectional area (CMO:0001697)460220938105220938Rat
1578658Bss13Bone structure and strength QTL 138femur strength trait (VT:0010010)femoral neck polar moment of inertia (CMO:0001670)460220938105220938Rat
2300179Bmd50Bone mineral density QTL 505.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)460928534105928534Rat
1549839Bw52Body weight QTL 520.0001body mass (VT:0001259)body weight gain (CMO:0000420)461697658115089733Rat
61418Pia5Pristane induced arthritis QTL 54.5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)462277855128289560Rat
6478743Anxrr40Anxiety related response QTL 400.83076defecation behavior trait (VT:0010462)defecation rate (CMO:0000998)462753847107753847Rat
6478772Anxrr49Anxiety related response QTL 490.15488defecation behavior trait (VT:0010462)defecation rate (CMO:0000998)462753847107753847Rat
6478684Anxrr30Anxiety related response QTL 300.00087defecation behavior trait (VT:0010462)defecation rate (CMO:0000998)462753847107753847Rat
631651Bp124Blood pressure QTL 1243arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)462879517107879517Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)percent change in mean arterial blood pressure (CMO:0002035)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)percent change in systolic blood pressure (CMO:0000747)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)absolute change in pulse pressure (CMO:0001882)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)462933508114921294Rat
631674Iddm14Insulin dependent diabetes mellitus QTL 14blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)464528739157573521Rat
61330Eau1Experimental allergic uveoretinitis QTL 10.0003uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)470362013132642728Rat
634344Hcar7Hepatocarcinoma resistance QTL 77.8liver integrity trait (VT:0010547)liver tumorous lesion area to total liver area ratio (CMO:0001075)470808386115808386Rat
634344Hcar7Hepatocarcinoma resistance QTL 77.8liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)470808386115808386Rat
631646Stl4Serum triglyceride level QTL 46.50.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)473169846132642728Rat
724522Bp146Blood pressure QTL 1462.20.0021arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)473630210118630210Rat
2302051Pia28Pristane induced arthritis QTL 285.30.001blood autoantibody amount (VT:0003725)serum immunoglobulin G-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002112)473630210118630210Rat
70167Bw22Body weight QTL 223.1body mass (VT:0001259)body weight (CMO:0000012)476647384117676292Rat
1357342Bw40Body weight QTL 400.001body mass (VT:0001259)body weight (CMO:0000012)476647384117676292Rat
631662Hcar2Hepatocarcinoma resistance QTL 23.10.0003liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)478878504123878504Rat
631556Bp135Blood pressure QTL 1350.017arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)478881294117676292Rat
738015Pia9Pristane induced arthritis QTL 94.50.048joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)480694870125694870Rat
2306899Bp338Blood pressure QTL 3380.071arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)481006124120102625Rat
1641919Alc22Alcohol consumption QTL 220.0005drinking behavior trait (VT:0001422)ethanol drink intake rate (CMO:0001407)481192555126192555Rat
70177Xhs1X-ray hypersensitivity QTL 125.1intestine integrity trait (VT:0010554)post-insult time to onset of moribundity (CMO:0001896)482798864152731274Rat
1576316Ept5Estrogen-induced pituitary tumorigenesis QTL 53.8pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)483428419177635233Rat
634334Xhs3X-ray hypersensitivity QTL 310intestine integrity trait (VT:0010554)post-insult time to onset of moribundity (CMO:0001896)484728680129854654Rat
1582232Gluco25Glucose level QTL 253.60.0023blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)485253748148090731Rat
12798523Anxrr56Anxiety related response QTL 562.830.05locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)485253748150276390Rat
1358202Gluco11Glucose level QTL 112.40.02adipocyte glucose uptake trait (VT:0004185)absolute change in adipocyte glucose uptake (CMO:0000873)485379421167139601Rat
61476Aia3Adjuvant induced arthritis QTL 33.9joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)486730991131730991Rat
1578662Bss15Bone structure and strength QTL 1519.6femur width (VT:1000666)femoral neck width (CMO:0001695)487327165132327165Rat
1578670Bss14Bone structure and strength QTL 1416.4femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)487327165132327165Rat
2317587Eae26Experimental allergic encephalomyelitis QTL 26nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)488656681103194984Rat
1578655Bmd11Bone mineral density QTL 1111femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)490850165135850165Rat
634335Anxrr16Anxiety related response QTL 167.22locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)493308457167139447Rat
631689Scl4Serum cholesterol level QTL 41.90.008blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)495174120140174120Rat
8662350Eae35Experimental allergic encephalomyelitis QTL 356.2blood tumor necrosis factor amount (VT:0008552)inflammatory exudate tumor necrosis factor level (CMO:0001435)4100834579103761084Rat
61434Cia3Collagen induced arthritis QTL 34.8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4103194656148194656Rat
2317588Eae27Experimental allergic encephalomyelitis QTL 27nervous system integrity trait (VT:0010566)percentage of study population developing experimental autoimmune encephalomyelitis during a period of time (CMO:0001047)4103194805112478794Rat
2302049Pia32Pristane induced arthritis QTL 325.10.001blood autoantibody amount (VT:0003725)serum immunoglobulin G-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002112)4105789505150789505Rat
731165Uae21Urinary albumin excretion QTL 212.40.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)4106649412151649412Rat
61406Scwia1Streptococcal cell wall induced arthritis QTL 12.3joint integrity trait (VT:0010548)experimental arthritis severity measurement (CMO:0001459)4106805662151805662Rat
7207480Bss105Bone structure and strength QTL 1058.1femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)4109827074154827074Rat
1549832Bss3Bone structure and strength QTL 311femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)4109827074154827074Rat
737821Hcar9Hepatocarcinoma resistance QTL 93.7liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)4109866907167139601Rat
1331759Hrtrt13Heart rate QTL 133.54628heart pumping trait (VT:2000009)heart rate (CMO:0000002)4110275411168266883Rat
6478760Anxrr45Anxiety related response QTL 450.06717locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4110870972155870972Rat
6478763Anxrr46Anxiety related response QTL 460.07428locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4110870972155870972Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general inducing agent: myelin oligodendrocyte glycoprotein aa1-125 2317591
qtl_general measurement method: animals were killed 28-40 days after immunization and Eae scored on the scale of 0-4; when the disease was severe the rats were killed 2317591
qtl_general software used: R/QTL 2317591
qtl_general this region is responsible for the susceptibility of the disease 2317591
qtl_general number of animals used:794 G10 generation rats from the advanced intercross line 2317591