Eae24 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Eae24 (Experimental allergic encephalomyelitis QTL 24) Rattus norvegicus

Symbol: Eae24
Name: Experimental allergic encephalomyelitis QTL 24
RGD ID: 2317577
Trait: nervous system integrity trait   (VT:0010566)    
Measurement Type: experimental autoimmune encephalomyelitis duration   (CMO:0001424)    
LOD Score: Not Available
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2466,993,185 - 72,752,834RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0465,987,814 - 73,372,824RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0465,802,990 - 138,066,698RGDRnor5.0
RGSC_v3.4465,821,936 - 71,729,738RGDRGSC3.4
Cross Type: Not Available
Strains Crossed: DA/ZtmKini PVG.1AV1/Kini 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
# Reference Title Reference Citation
1. Multiple loci comprising immune-related genes regulate experimental neuroinflammation. Marta M, etal., Genes Immun. 2010 Jan;11(1):21-36. Epub 2009 Aug 13.
2. Data registered by Dr. Olsson Personal communication between Dr. Olsson and the RGD curators.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
69274Casp2caspase 247114963271167388Rat
69335Trpv6transient receptor potential cation channel, subfamily V, member 647050734770523013Rat
3760Ssbp1single stranded DNA binding protein 146926602469276135Rat
708437Prss3bprotease, serine, 3B46987181069875518Rat
727853Tas2r126taste receptor, type 2, member 12647133382171334747Rat
620718Arhgef5Rho guanine nucleotide exchange factor 547208720572112316Rat
2360Clcn1chloride voltage-gated channel 147117194971201483Rat
3826Tbxas1thromboxane A synthase 146766496367837096Rat
628694Zc3hav1zinc finger CCCH-type containing, antiviral 146701212967062428Rat
620698Zyxzyxin47123676771246553Rat
3418Prss2protease, serine, 247027830470283385Rat
1304680Epha1Eph receptor A147124640971260920Rat
3417Prss1serine protease 147036458970367792Rat
1303251Mkrn1makorin ring finger protein 146817590868197216Rat
620636Trpv5transient receptor potential cation channel, subfamily V, member 547053643270562743Rat
708585LOC286960preprotrypsinogen IV46981510769826206Rat
70946Pipprolactin induced protein47078762770791921Rat
1303054Prss58serine protease 5846975264669757306Rat
1302947Prss59protease, serine 5946976420669785111Rat
735188Gstk1glutathione S-transferase kappa 147111897971123298Rat
620867Sval1seminal vesicle antigen-like 147084522870856192Rat
620869Sval2seminal vesicle antigen-like 247080936670813330Rat
619908BrafB-Raf proto-oncogene, serine/threonine kinase46837548468510652Rat
1333950Or2f2olfactory receptor family 2 subfamily F member 247174019371741149Rat
1308628Parp12poly (ADP-ribose) polymerase family, member 1246782654867885356Rat
1333504Or13m2olfactory receptor family 13 subfamily M member 247175974771760682Rat
1333381Or10ac1olfactory receptor family 10 subfamily AC member 147145036371451316Rat
1359400Try10trypsin 1047024431470247819Rat
1359405Fam115efamily with sequence similarity 115, member E47151027871524582Rat
1333098Or2a14olfactory receptor family 2 subfamily A member 1447194234371943275Rat
1333188Or2r3olfactory receptor family 2 subfamily R member 347137786971378810Rat
1310722Ubn2ubinuclein 246716527867251562Rat
1333772Or2a12-ps1olfactory receptor family 2 subfamily A member 12, pseudogene 147189871971899655Rat
1310346Slc37a3solute carrier family 37, member 346810931468153590Rat
1333327Olr815-psolfactory receptor pseudogene 81547190616971906509Rat
1308368Mgam2maltase-glucoamylase 246962402469715782Rat
1332594Or2f1olfactory receptor family 2 subfamily F member 147168893671689889Rat
1333367Or6b1olfactory receptor family 6 subfamily B member 147179998271800917Rat
1308651Luc7l2LUC7-like 2 pre-mRNA splicing factor46728759367347986Rat
1311446Prss3serine protease 347020308870206562Rat
1332872Or2a51olfactory receptor family 2 subfamily A member 5147201281972013760Rat
1306163Ephb6Eph receptor B647049197370507230Rat
1309217Mrps33mitochondrial ribosomal protein S3346859672968605547Rat
1333975Or2q1olfactory receptor family 2 subfamily Q member 147177536871776300Rat
1308130Ndufb2NADH:ubiquinone oxidoreductase subunit B246836752668374609Rat
1309349Hipk2homeodomain interacting protein kinase 246743932767619223Rat
1309236Zc3hav1lzinc finger CCCH-type containing, antiviral 1 like46699419267003207Rat
1333433Or9a7-ps1olfactory receptor family 9 subfamily A member 7, pseudogene 146936072369361664Rat
1332716Or2a25olfactory receptor family 2 subfamily A member 2547187857871879519Rat
1306142Dennd2aDENN domain containing 2A46823301668332235Rat
1563848LOC312273Trypsin V-A46979766169803606Rat
1560283Try5trypsin 547021376070217034Rat
1561363Ift56intraflagellar transport 5646709062267154707Rat
1560653Fam131bfamily with sequence similarity 131, member B47120103771210292Rat
1563986Dennd11DENN domain containing 1146919716169266013Rat
1562314Tas2r144taste receptor, type 2, member 14447108618271087141Rat
1562066Or9a2olfactory receptor family 9 subfamily A member 247067145170672395Rat
1563929NoboxNOBOX oogenesis homeobox47212893172134436Rat
1333811Or2r3bolfactory receptor family 2 subfamily R member 3B47138952671390464Rat
1332737Or9a4olfactory receptor family 9 subfamily A member 446940160669402550Rat
1311823Prss37serine protease 3746932297769334555Rat
1560649Tas2r138taste receptor, type 2, member 13846942834469429339Rat
1334194Or2r11olfactory receptor family 2 subfamily R member 1147136649071367431Rat
1311058Adck2aarF domain containing kinase 246834885368362725Rat
1559476Fmc1formation of mitochondrial complex V assembly factor 146727410467282140Rat
1562046Agkacylglycerol kinase46911485069193989Rat
1560602Tas2r137taste receptor, type 2, member 13746927927669286935Rat
1334415Or2a5olfactory receptor family 2 subfamily A member 547185608471857016Rat
1564286Moxd2monooxygenase, DBH-like 246972469369733188Rat
1561194Tas2r108taste receptor, type 2, member 10846928766769288581Rat
1334159Or2a57olfactory receptor family 2 subfamily A member 5747204632872047290Rat
1334371Or2f5-ps1olfactory receptor family 2 subfamily F member 5, pseudogene 147166245671662897Rat
1334209Or2a7olfactory receptor family 2 subfamily A member 747197902671979958Rat
1333011Or2a20olfactory receptor family 2 subfamily A member 2047203190972032871Rat
1333677Or2f1bolfactory receptor family 2 subfamily F member 1B47170732671708276Rat
1587195Or2a52olfactory receptor family 2 subfamily A member 5247196511871966047Rat
1587495Klrg2killer cell lectin like receptor G246736021667374867Rat
1565470KelKell metallo-endopeptidase (Kell blood group)47056824170585666Rat
1565474Tcaf1TRPM8 channel-associated factor 147158967471639274Rat
1584755Clec5aC-type lectin domain containing 5A46940712569416872Rat
1587197Wee2WEE2 oocyte meiosis inhibiting kinase46923904369261576Rat
1566290Tas2r143taste receptor, type 2, member 14347128785771288741Rat
1561078Tas2r135taste receptor, type 2, member 13547129291271293877Rat
1565263Rab19RAB19, member RAS oncogene family46815715968166889Rat
1565373Clec2lC-type lectin domain family 2, member L46739211867414539Rat
1585938Tmem178btransmembrane protein 178B46865942569035690Rat
1583604Chmp4bl1chromatin modifying protein 4B-like 146804974268050791Rat
1597830LOC683849similar to Anionic trypsin II precursor (Pretrypsinogen II)47034433870348069Rat
1595436Tas2r139taste receptor, type 2, member 13947098528070986239Rat
1589408Tpk1thiamin pyrophosphokinase 147217013472557707Rat
1595510Llcfc1LLLL and CFNLAS motif containing 147056620670567592Rat
1594187Tmem139transmembrane protein 13947114707271149151Rat
1591778Tcaf2cTRPM8 channel associated factor 2C47155370071567820Rat
1592650Kdm7alysine demethylase 7A46789940767974264Rat
1598148Prss2-ps1protease, serine, 2, pseudogene 147031769070320752Rat
2321500Prdx1-ps1peroxiredoxin 1, pseudogene 147114152971143722Rat
2323279Dtl-ps1denticleless E3 ubiquitin protein ligase, pseudogene 147075251370753615Rat
2323329Ndufa2-ps2NADH:ubiquinone oxidoreductase subunit A2, pseudogene 247060065270601022Rat
6493911LOC100911271uncharacterized LOC10091127147003688070038079Rat
6496223Poldip2-ps1DNA polymerase delta interacting protein 2, pseudogene 146985630069858239Rat
7517929LOC102548553uncharacterized LOC10254855347208172272088278Rat
7666339Fth1-ps1ferritin heavy chain 1, pseudogene 146843185768436899Rat
7626918Tmsb10-ps5thymosin, beta 10, pseudogene 546836299068367488Rat
7643066Srsf3-ps6serine and arginine rich splicing factor 3, pseudogene 646834229268343400Rat
7618053LOC102554637anionic trypsin-2-like47033167370335768Rat
7574135LOC102555151uncharacterized LOC10255515146892487368939499Rat
9116769LOC103692103uncharacterized LOC10369210346862670668655436Rat
9320161LOC103692107small nuclear ribonucleoprotein E pseudogene46732695167328859Rat
9369725Mgammaltase-glucoamylase46944162669602068Rat
11448653LOC108350693high mobility group protein B1 pseudogene46709136867092710Rat
11451624Trnar-ccu2transfer RNA arginine (anticodon CCU) 246727344867273520Rat
11419404LOC108350809glyceraldehyde-3-phosphate dehydrogenase pseudogene47201417272015171Rat
11481974LOC108350700uncharacterized LOC10835070047224919372293064Rat
11498065LOC10835080840S ribosomal protein S23 pseudogene47167471371675154Rat
41357395LOC120102713small nucleolar RNA SNORA1747175492771755060Rat
41384154LOC120102260uncharacterized LOC12010226047120915971219286Rat
41142180LOC120102680small nucleolar RNA SNORA1746776730567767435Rat
41142645Cdc42-ps1cell division cycle 42, pseudogene 147020715770207873Rat
41267017LOC120102261uncharacterized LOC12010226147126100871284951Rat
41372108LOC120102490insulin-induced gene 1 protein-like46733039967331371Rat
41219357LOC120102491uncharacterized LOC12010249146798822168026091Rat
41399876LOC120102605U6 spliceosomal RNA47179492871795029Rat
41072194Rpl23-ps7ribosomal protein L23,pseudogene 746725589767260205Rat
41161250Rnu6-604RNA, U6 small nuclear 60446803216868032274Rat
40956713LOC120102160uncharacterized LOC12010216047198640571989140Rat
40962184LOC120102609small nucleolar RNA SNORA7146819917868199301Rat
40994299LOC120102257uncharacterized LOC12010225746861471568622669Rat
41054799LOC120102741small nucleolar RNA SNORD8847116051571160603Rat
41055517LOC120102159uncharacterized LOC12010215947185448371905362Rat
41225554Rpl26-ps11ribosomal protein L26, pseudogene 1146839090368395785Rat
41226242LOC120102568U6 spliceosomal RNA47044930770449413Rat
41021783LOC120102259uncharacterized LOC12010225947042230970428425Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
11171D4Hri215547036205170362206Ratregion
11172D4Wox2419447036204170362226Ratregion
11173D4Arb829647036201370362309Ratregion
11174D4Mgh3238147027879370279197Ratregion
11176D4Wox2320047028245670282627Ratregion
11177D4Arb937047027962870279998Ratregion
11342D4Got4318446927604269276226Ratregion
11401D4Arb1218447041122270411406Ratregion
33682D7Mit1820046792233367922521Ratregion
36181D4Rat2616047036201770362197Ratregion
37012D4Rat2512746699318566993302Ratregion
37026D4Rat2712447250051072500627Ratregion
34845D4Rat1913347171132571711456Ratregion
38966D4Rat9320046865345668653663Ratregion
39266D4Rat10224646738666967386927Ratregion
42170D4Arb3416546926030869260484Ratregion
42174D4Arb3612047028245570282627Ratregion
42178D4Arb3812047036204870362226Ratregion
41124D4Rat16220546969588469696096Ratregion
43806D4Got4714846865726268657410Ratregion
43808D4Got4925046767659267676842Ratregion
43809D4Got5212047160242071602540Ratregion
43810D4Got5120647124172471241930Ratregion
60806D4Wox714647275270372752834Ratregion
60440D4Got4517246774119167741363Ratregion
60446D4Got5824647139971471399958Ratregion
62480D4Uia217846936437569364557Ratregion
1627601D4Got20820746821391568214121Ratregion
1635866D4Got20719147206521772065403Ratregion
1633811D4Got24622046851801768518239Ratregion
7206028Olfr44952447180016271800686Ratregion
5038644BB2834669946903533269035431Ratregion
5038776RH12732618446814184168142025Ratregion
5039036RH12747618247116719371167375Ratregion
5036749AU04908118546755668767556872Ratregion
5033909RH14057718546749730167497486Ratregion
7206214Insig118646733053167330696Ratregion
5034037RH14111919147124609171246282Ratregion
5034271RH14200818247120106771201249Ratregion
5034293RH14209621346722961067229823Ratregion
5026830RH13369521146701225167012462Ratregion
5029563BE09550915146730183067301983Ratregion
5035350BQ20563415046702926067029410Ratregion
5033007RH13726018246837884068379022Ratregion
5025014AU02331911146926168769261798Ratregion
5030429BF39757421346734479267345005Ratregion
5033231RH13806719646919721469197410Ratregion
5028454AI4474699946837913168379230Ratregion
5054895RH14348629946701328467013583Ratregion
5051763RH9464410947119985571199964Ratregion
5053793RH14285413346837617868376311Ratregion
5058840BF38714218346903366369033846Ratregion
5058356AI13694218846817893668179124Ratregion
5057834BF38624017346743648667436659Ratregion
5040756RH12846520847056830270568510Ratregion
5043780RH13022321546701224967012464Ratregion
5045516RH13122218046919367369193853Ratregion
5041352RH12880816246725137367251535Ratregion
5041506RH12889621546734731667347528Ratregion
5045160RH13101818146783643967837043Ratregion
5047662RH13245620246706264167062844Ratregion
5046656RH13187918146836252168362702Ratregion
5048120RH13272019446735207267352266Ratregion
5049772RH13367320147079130970791801Ratregion
5047294RH13224518046922959569229775Ratregion
5042594RH12952919746814247968142676Ratregion
5039804RH12791619347092705070927243Ratregion
5040044RH12805719646732899167329187Ratregion
5040044RH12805719646732899167329187Ratregion
5042746RH12962120247050701770507219Ratregion
5041582RH12894015847112312871123286Ratregion
5076450RH13918222346741431367414536Ratregion
5080626RH14168821646706707267067288Ratregion
5076108RH13898414846817640668176554Ratregion
5079392RH14096920447114872871148932Ratregion
5078958RH14065019147160017271600363Ratregion
5078962RH14065321947057717770577396Ratregion
5074020RH13777313146833046768330597Ratregion
5071230RH13496320046987183269872032Ratregion
5073290RH13735119046723624467236434Ratregion
5073638RH13755222247158983271590054Ratregion
5072372RH13681112746823324768233374Ratregion
5068676AU04700114247217539372175535Ratregion
5070358AI8417968446919732469197408Ratregion
5070360AV27746613647120131671201452Ratregion
5060404BI29217515046971704669717196Ratregion
5062484BF39797912046867061068670730Ratregion
5082471BF41606213046796623967966497Ratregion
5086475BE10708016046928096969281129Ratregion
5083017BF39066420146747884567479046Ratregion
5084730AI17794412046979702169797142Ratregion
5084344AI23371918246960171069601894Ratregion
5085343BE10205216146919966969199830Ratregion
5086419AI41235716447050927770509441Ratregion
5085888AW52926320346849411168494314Ratregion
5085988AW53595220246816967568169875Ratregion
5503088Zyx7547123904071239115Ratregion
5504078px-71c1025347079791070798163Ratregion
5504296D7S2119E10546903540369035508Ratregion
5505247Olfr455-ps140347145073071451133Ratregion
5505588UniSTS:48508494146936072269361663Ratregion
5505640UniSTS:48784996647129291171293877Ratregion
5505560GDB:45854138046748371567483795Ratregion
5505666UniSTS:48866996647129291171293877Ratregion
5505837UniSTS:49587962747125163171252258Ratregion
5505584UniSTS:48506293347185608371857016Ratregion
5505722UniSTS:49063588547128785671288741Ratregion
5501449Tcrb-C12547041796070418727Ratregion
5501874MARC_16655-16656:1017778016:121547115216871152636Ratregion
5505841UniSTS:49589182447050013470500958Ratregion
5502381RH12466932546836137668361701Ratregion
5502519RH12517711647123808971238205Ratregion
5506827G4626430246877419268774494Ratregion
Position Markers

Flank 1: (D4Rat25)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2466,993,185 - 66,993,302 (+)MAPPER
Rnor_6.0465,987,814 - 65,987,930NCBI
Rnor_5.0465,802,990 - 65,803,106UniSTS
RGSC_v3.4465,821,936 - 65,822,382RGD
RGSC_v3.4465,822,169 - 65,822,285UniSTS
RGSC_v3.1466,098,299 - 66,098,415RGD
Celera462,013,933 - 62,014,059UniSTS
RH 3.4 Map4419.41UniSTS
RH 3.4 Map4419.41RGD
SHRSP x BN Map434.06UniSTS
SHRSP x BN Map434.06RGD
Peak: (D4Rat26)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2470,362,017 - 70,362,197 (+)MAPPER
Rnor_6.0470,773,475 - 70,773,654NCBI
Rnor_5.04135,563,452 - 135,563,631UniSTS
RGSC_v3.4469,183,306 - 69,183,485UniSTS
RGSC_v3.4469,183,305 - 69,183,485RGD
RGSC_v3.1469,459,436 - 69,459,615RGD
Celera465,327,193 - 65,327,372UniSTS
RH 3.4 Map4419.41UniSTS
RH 3.4 Map4419.41RGD
RH 2.0 Map4437.5RGD
FHH x ACI Map444.7199RGD
Flank 2: (D4Wox7)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2472,752,703 - 72,752,834 (+)MAPPER
Rnor_6.0473,372,694 - 73,372,824NCBI
Rnor_5.04138,066,568 - 138,066,698UniSTS
RGSC_v3.4471,729,607 - 71,729,738RGD
RGSC_v3.4471,729,608 - 71,729,738UniSTS
RGSC_v3.1472,005,738 - 72,005,868RGD
Celera467,679,337 - 67,679,467UniSTS
RH 3.4 Map4437.3RGD
RH 3.4 Map4437.3UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
619616Bp79Blood pressure QTL 790.0292arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)4521460278882945Rat
2303168Bp330Blood pressure QTL 3304.250.017arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)45214602146446691Rat
631261Tcas3Tongue tumor susceptibility QTL 36.88tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)41081417091360527Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)411320076180699135Rat
6909122Insul22Insulin level QTL 224.63blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)42690728575585128Rat
6909128Pancm4Pancreatic morphology QTL 411.35pancreas mass (VT:0010144)pancreas wet weight (CMO:0000626)42690728575585128Rat
8655906Rf60Renal function QTL 603.8blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)42949419581006281Rat
12798520Anxrr55Anxiety related response QTL 554.450.01locomotor behavior trait (VT:0001392)number of rearing movements with lid-pushing in an experimental apparatus (CMO:0002715)432583980114627242Rat
8552782Vie1Viral induced encephalitis QTL 126.4brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)43443048482490359Rat
8552801Bw143Body weight QTL 1437.3body mass (VT:0001259)change in body weight to body weight ratio (CMO:0002216)43443048482490359Rat
8552809Vie5Viral induced encephalitis QTL 525.3brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)43443048482490359Rat
8655961Kidm43Kidney mass QTL 4318kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)436303261103194984Rat
1358352Srcrt3Stress Responsive Cort QTL 32.29blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)438465774146803430Rat
61475Aia2Adjuvant induced arthritis QTL 25.8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)43950527573892441Rat
1331807Rf31Renal function QTL 312.988urine potassium amount (VT:0010539)urine potassium level (CMO:0000128)43952426474726312Rat
1300139Hrtrt6Heart rate QTL 62.85heart pumping trait (VT:2000009)heart rate (CMO:0000002)439524264116179656Rat
61445Strs3Sensitivity to stroke QTL 33cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)44043338885433388Rat
8694439Bw168Body weight QTL 1689.570.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)44043341485433414Rat
6893678Bw108Body weight QTL 1082.60.006body mass (VT:0001259)body weight (CMO:0000012)44345797688457976Rat
1576305Emca6Estrogen-induced mammary cancer QTL 65.8mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)444463720155883716Rat
1354612Foco1Food consumption QTL 18.87eating behavior trait (VT:0001431)food intake rate (CMO:0000427)444463908148090542Rat
1354660Salc1Saline consumption QTL 111.26drinking behavior trait (VT:0001422)saline drink intake rate (CMO:0001627)444463908148090542Rat
2312567Glom19Glomerulus QTL 191.90.006kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)445456990146803430Rat
1298082Stresp4Stress response QTL 4blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)450119848146803430Rat
4889969Bss96Bone structure and strength QTL 964.9tibia size trait (VT:0100001)tibia cortical bone volume (CMO:0001725)45664777678882945Rat
4889972Bss97Bone structure and strength QTL 975.6tibia size trait (VT:0100001)tibia total bone volume (CMO:0001724)45664777678882945Rat
5685009Bmd86Bone mineral density QTL 863.7tibia mineral mass (VT:1000283)bone mineral density (CMO:0001226)45664777678882945Rat
5685012Bmd87Bone mineral density QTL 875.1tibia mineral mass (VT:1000283)bone mineral content (CMO:0001554)45664777678882945Rat
70200Alc18Alcohol consumption QTL 189.2drinking behavior trait (VT:0001422)ethanol intake volume to total fluid intake volume ratio (CMO:0001591)456647873149491524Rat
1641833Alc21Alcohol consumption QTL 218.60.0001drinking behavior trait (VT:0001422)ethanol drink intake rate (CMO:0001407)456698790126192555Rat
634311Sach7Saccharin preference QTL 7taste sensitivity trait (VT:0001986)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)45711443281266970Rat
631546Bp86Blood pressure QTL 863.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)45711443291360801Rat
61336Bp21Blood pressure QTL 214.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)45711470578881294Rat
1358363Sradr3Stress Responsive Adrenal Weight QTL 36.19adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)457486946102486946Rat
1558651Swd3Spike wave discharge measurement QTL 34.620.000024brain electrophysiology trait (VT:0010557)brain spike-and-wave discharge frequency (CMO:0001742)45843213392991462Rat
631671Iddm11Insulin dependent diabetes mellitus QTL 113.60.0012blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)45863587778886137Rat
738009Sach4Saccharine consumption QTL 44.90.000016consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)459948935154902892Rat
738016Alc16Alcohol consumption QTL 163.60.00015consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)459948935154902892Rat
738031Alc14Alcohol consumption QTL 147.60.00003consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)459948935154902892Rat
1578657Bss12Bone structure and strength QTL 128.9femur morphology trait (VT:0000559)femoral neck cross-sectional area (CMO:0001697)460220938105220938Rat
1578658Bss13Bone structure and strength QTL 138femur strength trait (VT:0010010)femoral neck polar moment of inertia (CMO:0001670)460220938105220938Rat
2300179Bmd50Bone mineral density QTL 505.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)460928534105928534Rat
1549843Bw53Body weight QTL 530.0001body mass (VT:0001259)body weight gain (CMO:0000420)461697658103194791Rat
1549839Bw52Body weight QTL 520.0001body mass (VT:0001259)body weight gain (CMO:0000420)461697658115089733Rat
61418Pia5Pristane induced arthritis QTL 54.5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)462277855128289560Rat
6478743Anxrr40Anxiety related response QTL 400.83076defecation behavior trait (VT:0010462)defecation rate (CMO:0000998)462753847107753847Rat
6478772Anxrr49Anxiety related response QTL 490.15488defecation behavior trait (VT:0010462)defecation rate (CMO:0000998)462753847107753847Rat
6478684Anxrr30Anxiety related response QTL 300.00087defecation behavior trait (VT:0010462)defecation rate (CMO:0000998)462753847107753847Rat
631651Bp124Blood pressure QTL 1243arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)462879517107879517Rat
7394826Bw126Body weight QTL 1260.002body mass (VT:0001259)body weight gain (CMO:0000420)46293326987483707Rat
8552807Vie4Viral induced encephalitis QTL 47.3brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)46293350882490359Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)percent change in mean arterial blood pressure (CMO:0002035)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)percent change in systolic blood pressure (CMO:0000747)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)absolute change in pulse pressure (CMO:0001882)462933508114921294Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)462933508114921294Rat
631674Iddm14Insulin dependent diabetes mellitus QTL 14blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)464528739157573521Rat
2312569Pur19Proteinuria QTL 193.40.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)46588210796130297Rat
2317577Eae24Experimental allergic encephalomyelitis QTL 24nervous system integrity trait (VT:0010566)post-insult time to onset of experimental autoimmune encephalomyelitis (CMO:0001422)46699318572752834Rat
2317577Eae24Experimental allergic encephalomyelitis QTL 24nervous system integrity trait (VT:0010566)percentage of study population developing experimental autoimmune encephalomyelitis during a period of time (CMO:0001047)46699318572752834Rat
2317577Eae24Experimental allergic encephalomyelitis QTL 24nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)46699318572752834Rat
2306547Iddm38Insulin dependent diabetes mellitus QTL 38blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)46738666970362197Rat
61330Eau1Experimental allergic uveoretinitis QTL 10.0003uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)470362013132642728Rat
634344Hcar7Hepatocarcinoma resistance QTL 77.8liver integrity trait (VT:0010547)liver tumorous lesion area to total liver area ratio (CMO:0001075)470808386115808386Rat
634344Hcar7Hepatocarcinoma resistance QTL 77.8liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)470808386115808386Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general inducing agent: myelin oligodendrocyte glycoprotein aa1-125 2317591
qtl_general this region is responsible for the severity and susceptibility of the disease 2317591
qtl_general measurement method: animals were killed 28-40 days after immunization and Eae scored on the scale of 0-4; when the disease was severe the rats were killed 2317591
qtl_general number of animals used:794 G10 generation rats from the advanced intercross line 2317591
qtl_general software used: R/QTL 2317591