Pur18 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Pur18 (Proteinuria QTL 18) Rattus norvegicus

Symbol: Pur18
Name: Proteinuria QTL 18
RGD ID: 2312562
Previously known as: protenuria at day 0; Prot day 0
Trait: urine total protein amount   (VT:0000032)    
Measurement Type: urine total protein excretion rate   (CMO:0000756)    
LOD Score: 2.6
P Value: 0.001
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.252,138,965 - 32,656,739RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.051,525,098 - 33,001,026RGD_MAPPER_PIPELINERnor6.0
Rnor_5.051,521,341 - 29,109,277RGDRnor5.0
RGSC_v3.451,220,773 - 24,978,263RGDRGSC3.4
Cross Type: backcross
Strains Crossed: LEW/Maas LEW/Mol 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition
antibody  (IDA)

Measurement Method

Vertebrate Trait

Rat Strain
LEW/Maas  (IEA)
LEW/Mol  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Genetic predisposition for glomerulonephritis-induced glomerulosclerosis in rats is linked to chromosome 1. Ijpelaar DH, etal., Physiol Genomics. 2008 Oct 8;35(2):173-81. Epub 2008 Aug 5.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
69340Calb1calbindin 152937562429402532Rat
619748Cdh17cadherin 1752526282025314884Rat
69426Oprk1opioid receptor, kappa 151386001613877823Rat
621017LynLYN proto-oncogene, Src family tyrosine kinase51663951216755501Rat
620242Sgk3serum/glucocorticoid regulated kinase family, member 3593457619472243Rat
621349Kcnb2potassium voltage-gated channel subfamily B member 2535670124028564Rat
727868Nsmafneutral sphingomyelinase activation associated factor51951779519578773Rat
621420Nbnnibrin52945957429494152Rat
708520Vcpip1valosin containing protein interacting protein 1595342479560889Rat
620199Mmp16matrix metallopeptidase 1653131228031556276Rat
3025Lypla1lysophospholipase 151467960514708774Rat
620108Ncoa2nuclear receptor coactivator 2558356426069693Rat
631423Tp53inp1tumor protein p53 inducible nuclear protein 152425398624272250Rat
621497Sdcbpsyndecan binding protein51947349919517188Rat
621479Stau2staufen double-stranded RNA binding protein 2528407413084935Rat
620104Gdf6growth differentiation factor 652299624623012567Rat
1307055Cspp1centrosome and spindle pole associated protein 1590771619192402Rat
70999Decr12,4-dienoyl-CoA reductase 152941117229439054Rat
735169Rpl7ribosomal protein L7532171843220192Rat
621037Rps20ribosomal protein S2051681909516820476Rat
708548Necab1N-terminal EF-hand calcium binding protein 152835785928578642Rat
620393Pdp1pyruvate dehydrogenase phosphatase catalytic subunit 152544684325455107Rat
2482Cyp7a1cytochrome P450 family 7 subfamily A member 151937697919386676Rat
1306323Osgin2oxidative stress induced growth inhibitor family member 252950040629519340Rat
1305917Npbwr1neuropeptides B and W receptor 151349531913498761Rat
1304709Car8carbonic anhydrase 852130294021402395Rat
1304796Mrpl15mitochondrial ribosomal protein L1551472996114741276Rat
3103MosMOS proto-oncogene, serine/threonine kinase51685995716861264Rat
1305828Dpy19l4dpy-19 like 452435128924410932Rat
1307132Slco5a1solute carrier organic anion transporter family, member 5A1562289386358124Rat
1308557Ubxn2bUBX domain protein 2B51930363419333181Rat
1307386GemGTP binding protein overexpressed in skeletal muscle52521430925225222Rat
1306455Bpnt23'(2'), 5'-bisphosphate nucleotidase 251777568417802570Rat
68323Rab2aRAB2A, member RAS oncogene family52167601721740035Rat
1310024Otud6bOTU deubiquitinase 6B52818199228214486Rat
1305371Sox17SRY-box transcription factor 1751501666015022228Rat
1307783Ccne2cyclin E252428507824298258Rat
1303284Trpa1transient receptor potential cation channel, subfamily A, member 1543798624434133Rat
727793Rdh10retinol dehydrogenase 10531866713215572Rat
708566St18ST18 C2H2C-type zinc finger transcription factor51258249312914221Rat
620658Elocelongin C526615272677893Rat
1309880Tcea1transcription elongation factor A151463145414668769Rat
1310455Toxthymocyte selection-associated high mobility group box51987499420171272Rat
1559717Sbsponsomatomedin B and thrombospondin, type 1 domain containing534027633433338Rat
1310846Slc26a7solute carrier family 26 member 752788440028021865Rat
1309085Ndufaf6NADH:ubiquinone oxidoreductase complex assembly factor 652414771224171981Rat
1302993Ly96lymphocyte antigen 96525822332612357Rat
1312000Asphaspartate-beta-hydroxylase52260158122814107Rat
1311574Terf1telomeric repeat binding factor 1534431033472377Rat
1312029Plekhf2pleckstrin homology and FYVE domain containing 252409107724106758Rat
1309006Tmem68transmembrane protein 6851649405416524842Rat
1549780Xkr4XK related 451589681816297733Rat
1306507Rad54bRAD54 homolog B52503211225104630Rat
1310301Cops5COP9 signalosome subunit 5591922339210498Rat
1307876Lactb2lactamase, beta 2555690805591843Rat
708554Sulf1sulfatase 1563628946526174Rat
1305490Runx1t1RUNX1 partner transcriptional co-repressor 152718767427338070Rat
1305496Mscmusculin545473354553206Rat
1306225Pip4p2phosphatidylinositol-4,5-bisphosphate 4-phosphatase 252825982128307225Rat
1309346Rb1cc1RB1-inducible coiled-coil 151316164813225560Rat
1306940Mybl1MYB proto-oncogene like 1595829059618179Rat
1307658Rbm12bRNA binding motif protein 12B52559740525610324Rat
1311403Rrs1ribosome biogenesis regulator 1 homolog597334869735119Rat
1308863Adhfe1alcohol dehydrogenase, iron containing, 1597059669732580Rat
1311764Cpa6carboxypeptidase A6585267088888492Rat
1310681Cibar1CBY1 interacting BAR domain containing 152561399325632440Rat
1309167Ripk2receptor-interacting serine-threonine kinase 252963080629662804Rat
1305286Plag1PLAG1 zinc finger51690205716956727Rat
1309953Tgs1trimethylguanosine synthase 151652486416558399Rat
1310592Ints8integrator complex subunit 852429554224344642Rat
1310557Rbpjl2recombination signal binding protein for immunoglobulin kappa J region-like 2554649695466367Rat
1307865Prex2phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2579376928253112Rat
1560481Esrp1epithelial splicing regulatory protein 152442761124482157Rat
1561068Mcmdc2minichromosome maintenance domain containing 2592919679337526Rat
1359575LOC297756ribosomal protein S8-like533928463393523Rat
1562060Sdr16c6short chain dehydrogenase/reductase family 16C, member 651709520817118713Rat
1560290Sntg1syntrophin, gamma 15998055010794666Rat
68946Penkproenkephalin51718379917189160Rat
1563586Rps4x-ps8ribosomal protein S4, X-linked, pseudogene 8523498632350756Rat
1562450Atp6v1hATPase H+ transporting V1 subunit H51437902914484703Rat
1563403Fam110bfamily with sequence similarity 110, member B51878936218929647Rat
1564053C5h8orf34similar to human chromosome 8 open reading frame 34572379687777119Rat
1311921Chd7chromodomain helicase DNA binding protein 752181200721995358Rat
1560793Arfgef1ADP ribosylation factor guanine nucleotide exchange factor 1589820619076326Rat
1564095Rplp2l1ribosomal protein lateral stalk subunit P2 like 151255128712552204Rat
1560994Eif1-ps8eukaryotic translation initiation factor 1, pseudogene 852109854621099214Rat
1564278Rnps1-ps5RNA binding protein with serine rich domain 1, pseudogene 552463041024632144Rat
1359100Tram1translocation associated membrane protein 1556425795667666Rat
1359260Xkr9XK related 9555303845562168Rat
1559904Virmavir like m6A methyltransferase associated52496120825024660Rat
1549749Cfap418cilia and flagella associated protein 41852399639524015609Rat
1559441Cd99l4CD99 molecule like 452472267224769964Rat
1586167Tmem67transmembrane protein 6752553645825589378Rat
1585792Kif1c-ps1kinesin family member 1C, pseudogene 151090616110908936Rat
1585836Tra2a-ps3transformer 2 alpha, pseudogene 351010664210108431Rat
1585679Ppp1r42protein phosphatase 1, regulatory subunit 42592271099274461Rat
1586088Gabpb2-ps1GA binding protein transcription factor subunit beta 2, pseudogene 152959621329605030Rat
1586091Rpl11-ps4ribosomal protein L11, pseudogene 452413611524136752Rat
1586092LOC366310pseudogene for small nuclear RNA U3 (H3.9)52206501822065142Rat
1586095Psmd12-ps1proteasome 26S subunit, non-ATPase 12, pseudogene 151362624113708195Rat
1586096Pcmtd1protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 151228471112355680Rat
1585970Acbd5-ps2acyl-CoA binding domain containing 5, pseudogene 2523507182462194Rat
1583733Lrrc69leucine rich repeat containing 6952802359128181963Rat
1586146Rgs20regulator of G-protein signaling 2051448443614614317Rat
1586147Eef1g-ps4eukaryotic translation elongation factor 1 gamma, pseudogene 4594987619503171Rat
1565999Sdr16c5short chain dehydrogenase/reductase family 16C, member 551701881317043974Rat
1566224Tmem70transmembrane protein 70526371022654729Rat
1564405Nufip2-ps1nuclear FMR1 interacting protein 2, pseudogene 1542710524273239Rat
1564200Clvs1clavesin 152240838422604281Rat
1564981Scp2-ps1sterol carrier protein 2, pseudogene 151660859516609025Rat
1561849Vxnvexin596592139684684Rat
1563301Rps16-ps4ribosomal protein S16, pseudogene 452152477121525259Rat
1583530Alkal1ALK and LTK ligand 151301972913049913Rat
1563405Ptp4a2l1protein tyrosine phosphatase 4A2 like 151753051717532146Rat
1561260Triqktriple QxxK/R motif containing52639151126464422Rat
1565372Ube2cl1ubiquitin-conjugating enzyme E2C like 151899814819001967Rat
1565647Cyld-ps1CYLD lysine 63 deubiquitinase, pseudogene 151520207415205290Rat
1565988Bhmt-ps1betaine-homocysteine S-methyltransferase, pseudogene 153036296530390524Rat
1592300Cnbd1cyclic nucleotide binding domain containing 153223400332606765Rat
1588818Rpl24l2ribosomal protein L24 like 252454271424543178Rat
1584848Hnrnpa1-ps5heterogeneous nuclear ribonucleoprotein A1, pseudogene 551085591210856695Rat
1584849Eya1EYA transcriptional coactivator and phosphatase 1548635015101483Rat
1584850Ndufb4-ps8NADH:ubiquinone oxidoreductase subunit B4, pseudogene 8547967974797193Rat
1584867Phb1-ps14prohibitin 1, pseudogene 14553298535331546Rat
1592689Chchd7coiled-coil-helix-coiled-coil-helix domain containing 751695712716961682Rat
1596128Tmem64transmembrane protein 6452869894728745384Rat
1598345Got2-ps2glutamic-oxaloacetic transaminase 2, pseudogene 251221532912216562Rat
1597419Dnaja1-ps2DnaJ heat shock protein family (Hsp40) member A1, pseudogene 252781036927811537Rat
1595256Sumo4small ubiquitin-like modifier 451509932015100304Rat
1591751Ybx1-ps1Y box binding protein 1, pseudogene 1570336337035171Rat
1591765Tuba1b-ps1tubulin, alpha 1B, pseudogene 1570293207030910Rat
1593494Eif5-ps9eukaryotic translation initiation factor 5, pseudogene 953067638330677491Rat
1589398Tcf24transcription factor 24592746599282876Rat
1593555Cnga4-ps1cyclic nucleotide gated channel subunit alpha 4, pseudogene 152971705229718455Rat
1597763Dnajb6-ps2DnaJ heat shock protein family (Hsp40) member B6, pseudogene 251687884816879742Rat
1596713Rp1RP1, axonemal microtubule associated51512110415582363Rat
1596418Zfp652-ps1zinc finger protein 652, pseudogene 151787251017899024Rat
2318103Nhp2-ps2NHP2 ribonucleoprotein, pseudogene 251392485214056332Rat
2318732Ago2-ps1argonaute RISC catalytic component 2, pseudogene 151102054911023395Rat
2318778Mrpl30-ps6mitochondrial ribosomal protein L30, pseudogene 652944778629448371Rat
2320072Eif5-ps4eukaryotic translation initiation factor 5, pseudogene 452514896325152683Rat
2319513Txn2-ps1thioredoxin 2, pseudogene 1565529356558546Rat
2318359Tiprl-ps2TOR signaling pathway regulator, pseudogene 251245487912455761Rat
2318973Ppp1cc-ps1protein phosphatase 1 catalytic subunit gamma, pseudogene 153045623330458067Rat
2319590Prdm14PR/SET domain 14560821636092712Rat
2320313Ergic2-ps2ERGIC and golgi 2, pseudogene 2534774413478415Rat
2320348Idi1-ps1isopentenyl-diphosphate delta isomerase 1, pseudogene 1526561612657460Rat
2322123Tmem251-ps1Transmembrane protein 251, pseudogene 1523423672342941Rat
2321393Rpl19l4ribosomal protein L19 like 451688089916898782Rat
2321512Ap4s1-ps1adaptor related protein complex 4 subunit sigma 1, pseudogene 151908004319081080Rat
2321121Mtrfr-ps1mitochondrial translation release factor in rescue, pseudogene 152378676823787484Rat
2324828Psmd1-ps1proteasome 26S subunit, non-ATPase 1, pseudogene 152208005922092892Rat
6487307C5h8orf88similar to human chromosome 8 open reading frame 8852833016728355691Rat
6495230Rps23-ps1ribosomal protein S23, pseudogene 152451555924516265Rat
6486737LOC100912510uncharacterized LOC10091251051719041417192458Rat
6487565C5h8orf89similar to human chromosome 8 open reading frame 89532255863247575Rat
6494602Rps15-ps4ribosomal protein S15, pseudogene 451245778012458197Rat
6502160Ppid-ps3peptidylprolyl isomerase D, pseudogene 351852878218540240Rat
6503620Ube2wubiquitin-conjugating enzyme E2W526907422754491Rat
6501591Rack1-ps1receptor for activated C kinase 1, pseudogene 151898710018990913Rat
7488972Mir378bmicroRNA 378b559467235946806Rat
7526543LOC102551006uncharacterized LOC10255100652158814221628171Rat
7520808LOC102548182uncharacterized LOC102548182556719475680129Rat
7637993LOC102552817uncharacterized LOC10255281751497160815016234Rat
7653207LOC102551372uncharacterized LOC10255137252174906421759653Rat
7638920LOC102552309uncharacterized LOC10255230952515280525154273Rat
7640679LOC102549899uncharacterized LOC10254989951943565319454889Rat
7641998LOC102555040uncharacterized LOC102555040531205153149122Rat
7629665LOC102555924uncharacterized LOC10255592452406921124077248Rat
7611658Fsbpfibrinogen silencer binding protein52505800325064276Rat
7618446LOC102549737uncharacterized LOC10254973751325044113272830Rat
7556989Ormdl1-ps2ORMDL sphingolipid biosynthesis regulator 1, pseudogene 253263950232645632Rat
7604960LOC102547431uncharacterized LOC10254743152426982624283178Rat
7567361LOC102555640uncharacterized LOC102555640542246724238926Rat
7586726LOC102552692uncharacterized LOC10255269252567482125715582Rat
7708268LOC102553889uncharacterized LOC10255388952806173828076577Rat
7734898LOC102548247uncharacterized LOC102548247565406136545453Rat
7711861LOC102549805uncharacterized LOC10254980551328171613326776Rat
7731407LOC102552377uncharacterized LOC10255237752527333925289529Rat
7696412LOC102555885uncharacterized LOC102555885545287604547276Rat
7721328LOC102556004uncharacterized LOC102556004592960849316974Rat
7674456Atp6v1e1-ps1ATPase H+ transporting V1 subunit E1, pseudogene 1564864146488878Rat
7747666Eno1-ps21enolase 1, pseudogene 2152453842024540101Rat
7729019LOC102552020uncharacterized LOC10255202052204894322052627Rat
9135524LOC103695239uncharacterized LOC10369523952455805624608755Rat
9196141Son-ps1SON DNA and RNA binding protein, pseudogene 151846947618473456Rat
9116417Dlgap5l1DLG associated protein 5 like 152467117324720087Rat
9272632LOC103692300uncharacterized LOC10369230052291604222921564Rat
9323738LOC103695237uncharacterized LOC10369523751619288716195997Rat
9302605LOC103692303uncharacterized LOC10369230352483066924855700Rat
9472653Dlg5l7discs large MAGUK scaffold protein 5 like 752480548324812407Rat
9452275LOC103692281BET1 homolog pseudogene51167072111671079Rat
9685089Lnc056long non-coding RNA 05652216267422163117Rat
11434367LOC108350932uncharacterized LOC10835093252410676124123754Rat
11472967LOC10835112160S ribosomal protein L29 pseudogene52753782727538390Rat
11444056LOC108350937ferritin light chain 1 pseudogene52843074328431569Rat
11427769LOC108351114high mobility group protein B1 pseudogene524750442475680Rat
11449903LOC108350931uncharacterized LOC10835093152222723222235944Rat
11366818Rpl30-ps4ribosomal protein L30, pseudogene 4584204618420804Rat
11453663LOC108350924uncharacterized LOC10835092451804101118060823Rat
11425397LOC108351116uncharacterized LOC108351116567352806753952Rat
11385100LOC108350923uncharacterized LOC10835092351430730214312194Rat
11374185LOC108350929uncharacterized LOC10835092952190195421930923Rat
11375408LOC108350928uncharacterized LOC10835092852157041721574912Rat
11398785LOC10835112060S ribosomal protein L17 pseudogene52746049327461058Rat
11400924Trnas-aga1transfer RNA serine (anticodon AGA) 152399628823996369Rat
11502483LOC108350922uncharacterized LOC108350922583808758383459Rat
11503786LOC108351119ferritin light chain 1 pseudogene52414242024143026Rat
11517012LOC108351080endogenous retrovirus group K member 9 Pol protein-like51373648313737690Rat
11517987LOC10835108140S ribosomal protein S18 pseudogene52206558922074840Rat
41380053LOC120102810uncharacterized LOC120102810564548746457731Rat
41204020LOC120102805uncharacterized LOC120102805550600945159282Rat
41281883LOC120102821uncharacterized LOC12010282152237056722384103Rat
41355203LOC120102838uncharacterized LOC12010283852966282929715416Rat
41087792LOC120102808uncharacterized LOC120102808555815695621082Rat
41277993Trnat-agu10transfer RNA threonine (anticodon AGU) 1052693417726934249Rat
41324050LOC120102828uncharacterized LOC12010282852430018124317387Rat
41356977LOC120103323small nucleolar RNA SNORA17521594732159603Rat
41384122Srsf3-ps3serine and arginine rich splicing factor 3, pseudogene 351873441318734925Rat
41114642LOC120103224U1 spliceosomal RNA52284666122846823Rat
41114922LOC120103328small nucleolar RNA SNORA1752751011927510246Rat
41205794Trnaa-agc87transfer RNA alanine (anticodon AGC) 87556893565689436Rat
41142696LOC120103375U4 spliceosomal RNA52160213121602278Rat
41253648LOC120103271small nucleolar RNA SNORA1552933447529334604Rat
41359748LOC120103345small nucleolar RNA SNORA1752095404020954161Rat
41091925Hnrnpa1-ps48heterogeneous nuclear ribonucleoprotein A1, pseudogene 4851143347611439810Rat
41092419LOC120103370U4 spliceosomal RNA565781096578255Rat
41208256LOC120103326small nucleolar RNA SNORA1752940795329408081Rat
41209789LOC120103334small nucleolar RNA SNORA1752765310727653215Rat
41362403Eef1e1-ps3eukaryotic translation elongation factor 1 epsilon 1, pseudogene 351945564319457562Rat
41388173Wsb1-ps1WD repeat and SOCS box-containing 1, pseudogene 152488168824891528Rat
41174538Tuba2l-ps1tubulin, alpha 2 like, pseudogene 152951187629518964Rat
41210398LOC120103350small nucleolar RNA SNORA40558334695833590Rat
41390808LOC120103319small nucleolar RNA SNORA1751684576216845890Rat
41120437LOC120102815uncharacterized LOC12010281551673192316761548Rat
41188737LOC120102826uncharacterized LOC12010282652401469424029945Rat
41121936LOC120102814uncharacterized LOC12010281451497213414983916Rat
41098563Pramel7-ps2preferentially expressed antigen in melanoma-like 7, pseudogene 251183103711832415Rat
41395404LOC120103059uncharacterized LOC12010305951628400116429252Rat
41100894LOC120102832RNA-binding protein 12B-A-like52559050025597273Rat
41101046LOC120102830uncharacterized LOC12010283052486926424872255Rat
41182145Snord87small nucleolar RNA, C/D box 87592974899297573Rat
41102124Kpna1-ps1karyopherin subunit alpha 1, pseudogene 153044913630455949Rat
41347757G3bp1-ps2G3BP stress granule assembly factor 1, pseudogene 251973493319737218Rat
41195959Runx1t1lRUNX1 partner transcriptional co-repressor 1 like52716768927188550Rat
41372576LOC120102809uncharacterized LOC120102809560778966099341Rat
41105122LOC120103140uncharacterized LOC120103140567824266796179Rat
41129079LOC120103277small nucleolar RNA SNORA2/SNORA34 family571110097111144Rat
41186497LOC120102811uncharacterized LOC12010281151224979812254124Rat
41228831LOC120103365U2 spliceosomal RNA577717537771881Rat
41271882LOC120103310small nucleolar RNA SNORA17542817024281825Rat
41350556LOC120103214U6 spliceosomal RNA52234882522348930Rat
41081239LOC120102827uncharacterized LOC12010282752403682024043057Rat
41108305Hspd1-ps36heat shock protein family D (Hsp60) member 1, pseudogene 3651449799614499931Rat
41164745Snord54small nucleolar RNA, C/D box 5451681994516820012Rat
41377667Ptmal6prothymosin alpha like 6557646715765429Rat
41166424LOC120103363U2 spliceosomal RNA52849750128497630Rat
40972884LOC120102833uncharacterized LOC12010283352646198526467263Rat
40974341LOC120103228U6 spliceosomal RNA51026308710263191Rat
40976711LOC120102817uncharacterized LOC12010281751808972818103756Rat
40927816LOC120103142uncharacterized LOC12010314252423019924231625Rat
40928183LOC120102807uncharacterized LOC120102807554355395438349Rat
40956040Bex4-ps2brain expressed X-linked 4, pseudogene 252862147428684995Rat
40956976LOC120103364U2 spliceosomal RNA536612473661373Rat
41001063LOC120103384U6 spliceosomal RNA51537542215375528Rat
40938154LOC120102824uncharacterized LOC12010282452301332023022049Rat
41008049LOC120102812uncharacterized LOC12010281251332942413361574Rat
40939148LOC120103320small nucleolar RNA SNORA1751883011718830241Rat
40941923LOC120102836uncharacterized LOC12010283652871884128768110Rat
40943670Rnu6-1297RNA, U6 small nuclear 1297592263019226401Rat
40944019LOC120103219U6 spliceosomal RNA53105101031051115Rat
41046326LOC120103295small nucleolar RNA SNORA1751981437419814505Rat
41046558LOC120102806uncharacterized LOC120102806553188005323393Rat
41244691LOC120103307small nucleolar RNA SNORA17535408223540951Rat
41312846LOC120103244U7 small nuclear RNA53215196932152031Rat
41025792LOC120102816uncharacterized LOC12010281651769069117736386Rat
41077767LOC120103251small nucleolar RNA SNORD7351869202518692080Rat
41052978LOC120103297small nucleolar RNA SNORA1751773591417736044Rat
41256875LOC120102804uncharacterized LOC120102804530227743080779Rat
41055096LOC120102823uncharacterized LOC12010282352269711922704317Rat
41152372LOC120103198U6 spliceosomal RNA562025226202625Rat
41032391Trnap-agg53transfer RNA proline (anticodon AGG) 5353214375232143824Rat
41314783St13-ps6ST13, Hsp70 interacting protein, pseudogene 652468005024684165Rat
41060632Ccnb1ip1-ps1cyclin B1 interacting protein 1, pseudogene 1542209144224617Rat
41035118LOC120103058uncharacterized LOC12010305851601108516015518Rat
41226688LOC120102835uncharacterized LOC12010283552755964727586169Rat
41301908Chtop-ps2chromatin target of PRMT1, pseudogene 252491451624919438Rat
41038477LOC120103270small nucleolar RNA SNORA851321464613214785Rat
41063004LOC120102825uncharacterized LOC12010282552402767024031806Rat
41040765LOC120102820uncharacterized LOC12010282052224295322247572Rat
41307010LOC120103144uncharacterized LOC12010314452903259729047722Rat
41020171LOC120102822uncharacterized LOC12010282252265484222679142Rat
41020351LOC120103356U6atac minor spliceosomal RNA52500862725008726Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
34387D5Mgh1719951452922514529436Ratregion
34469D5Mgh311952458344324583550Ratregion
34469D5Mgh311952458344324583550Ratregion
34469D5Mgh311952459887824598989Ratregion
34469D5Mgh311952459887824598989Ratregion
34481D5Mgh2812352483880224838943Ratregion
34599D5Mit1823651718969817189930Ratregion
34639D5Pas131052614166926141981Ratregion
36255D5Rat18913252381251823812651Ratregion
37596D5Rat118157559042635904428Ratregion
37784D5Rat59221522822262282446Ratregion
39686D5Rat119235538440183844247Ratregion
39756D5Rat12320751861599218616199Ratregion
39780D5Rat12719852660778426607972Ratregion
40414D5Rat20712552093858720938712Ratregion
40562D5Rat187172589482288948404Ratregion
40716D5Rat12411651887394718874051Ratregion
40718D5Rat120140581875018187645Ratregion
38744D5Rat116270521389652139201Ratregion
39992D5Rat21024952351305623513295Ratregion
40250D5Rat12523451739773617397969Ratregion
40330D5Rat13014553166378931663928Ratregion
39160D5Rat7323752483871024838943Ratregion
39338D5Rat20922952250972222510074Ratregion
39338D5Rat20922952250984722510074Ratregion
42190D5Arb1823452972406229724324Ratregion
42312D5Rat248239589591978959394Ratregion
42313D5Rat24920152123768721237888Ratregion
42730D5Rat214229556227075622920Ratregion
42731D5Rat215124593596939359791Ratregion
42734D5Rat21810052316678023166901Ratregion
41480D5Rat12827852450880624509116Ratregion
41480D5Rat12827852450887524509116Ratregion
40800D5Rat12620952404790024048109Ratregion
41076D5Rat121200598232669823460Ratregion
41728D5Rat18820451817359018173792Ratregion
44552D9Wox21136598842169884268Ratregion
43868D5Got3212543281744328386Ratregion
43869D5Got4296531498213150117Ratregion
43870D5Wox8163551121595112316Ratregion
43871D16Got27149594531439453292Ratregion
43872D5Rat18612751237395512374084Ratregion
43874D5Got11212652333204623332172Ratregion
43875D5Got10913052307306223073192Ratregion
43876D5Got13518652138987621390062Ratregion
60623D8Got2521552849399828494213Ratregion
60472D5Got1211577674867767685Ratregion
60478D5Got2199546582474658448Ratregion
60752D5Rat24724351402600914026245Ratregion
69540D5Uwm6195551428455143044Ratregion
69541D5Uwm7179561271396127284Ratregion
69542D5Uwm821851278975112789935Ratregion
69543D5Uwm913951635002416350163Ratregion
69544D5Uwm1012151499583414995947Ratregion
69546D5Uwm1215752726873627268904Ratregion
69568D5Uwm56116539579533958063Ratregion
69570D5Uwm57144562519846252128Ratregion
69572D5Uwm5814951479387814794021Ratregion
625790D5Got11119152323022623230415Ratregion
66416D5Mco529052354577523546079Ratregion
66658D5Mco2327151952503919525314Ratregion
66706D5Mco3620051037271110372890Ratregion
66707D5Mco3742352165449021654918Ratregion
67219D5Arb2217852801325928013437Ratregion
1630208D5Got20726551381391613814181Ratregion
1630361D5Got21111952686519226865311Ratregion
1630875D5Wox3620953154736731547578Ratregion
1631457D5Got28810453167064431670743Ratregion
1631652D5Got26299582084788208579Ratregion
1631759D5Got295154546582754658431Ratregion
1628062D5Got26125051453776414538012Ratregion
1629035D5Got20321451453226914532484Ratregion
1629157D5Got21314552748649727486644Ratregion
1629653D5Wox2619451386131313861507Ratregion
1641068D5Got20515351454121014541363Ratregion
1641273D5Got32211251219114212191254Ratregion
1641312D5Got32115151654023616540387Ratregion
1633225D5Got20612551396962113969746Ratregion
1639986D5Wox3416751938954419389711Ratregion
1640077D5Uia15976553859995386975Ratregion
1640560D5Got31718351674906616749249Ratregion
1640751D5Mco31923552354595223546187Ratregion
1635180D5Got28020151187609311876294Ratregion
1635380D5Got20412151364416513644286Ratregion
1635992D5Got200132531499723150104Ratregion
1636283D5Got299272575152057515477Ratregion
1638167D5Got28514652787870427878850Ratregion
1638319D5Got20814451602944716029591Ratregion
1633881D5Got202117589027568902873Ratregion
1634340D5Wox3125651938813419388390Ratregion
1634531D3Got2729252491974524919836Ratregion
1634714D5Got28314353196981631969954Ratregion
7206004Eya1448550137615014209Ratregion
7193019Runx1t142252733408227334504Ratregion
7193066D5Mit1823651718969817189929Ratregion
5035767PMC165443P112151938356819383689Ratregion
5038908RH127402207597060739706280Ratregion
5038982RH12744521951718380617184025Ratregion
7206540UniSTS:546979105952733419327335253Ratregion
5039222RH12758219251316288213163074Ratregion
5039278RH127614219531874953187714Ratregion
5036673AU048828256595295209529776Ratregion
5036829AU04933724552993213229932377Ratregion
5037109SHGC-5312018552463091124631096Ratregion
5037167RH8046023852733784327338081Ratregion
5037169RH9177214251892833618928478Ratregion
5035566SON9851846946018469551Ratregion
5033849RH140347136597282889728424Ratregion
5033893RH14051814851463158214631725Ratregion
5033903RH14055421151675462516754836Ratregion
5034009RH14101319852847366028473859Ratregion
5034009RH14101319852847366028473859Ratregion
5034121RH14144319652646405926464255Ratregion
5026468RH13232622052544686625447086Ratregion
5026582RH13276522052963087829631098Ratregion
5032040AU027527126562860716286194Ratregion
5032207AB02122814353154710131547244Ratregion
5026966RH13421418152260323822603419Ratregion
5027087D8S195729151892831518928606Ratregion
5029609BF386244154573374087337562Ratregion
5032453Rbpsuh-rs3624554652285465852Ratregion
5027225AI1964529351604613116046224Ratregion
5029865AW53093718452948600629486190Ratregion
5027263AV00136011952830693728307056Ratregion
5035310BM38627220952950116729501376Ratregion
5030215AW53231315953136060031360759Ratregion
5024982RH12683020852173974321739951Ratregion
5027725D8S195010652733459727334703Ratregion
5030231BE11111315151719048217190633Ratregion
5033077RH13750512352173943721739560Ratregion
5025146RH12709222251846952118469743Ratregion
5025146RH12709222251846952118469743Ratregion
5030451BI28869517652402980824029984Ratregion
5033233RH13807413751655823716558374Ratregion
5028037MHAa74a4.seq195589621528962347Ratregion
5028208D1Mit296158595326129532770Ratregion
5030849BE120681209591300579130266Ratregion
5030879BE11445819453155310731553301Ratregion
5028430D2635214152939924629399387Ratregion
5031199RH103002144561767856176929Ratregion
5052095RH9483714051675436216754500Ratregion
5055167RH14364419751235485212355049Ratregion
5051140RH13446218053154975531549935Ratregion
5055843RH14403414152173986821740009Ratregion
5056045RH14415123552952046329520698Ratregion
5051679RH9459519951386057213860771Ratregion
5056867RH14462615352435299224353145Ratregion
5052097RH9483817351675482716755000Ratregion
5054341RH143168202597156829715884Ratregion
5059520BE09719815552277206322772218Ratregion
5059578BE097333150558995015899651Ratregion
5056637RH14449318252963164929631831Ratregion
5056965RH14468220252729158627291788Ratregion
5056821RH14460016051281734012817500Ratregion
5050016RH13381319252260400022604192Ratregion
5053179RH142499109595407549540863Ratregion
5053567RH14272311152426562724265738Ratregion
5050620RH134162183556540645654247Ratregion
5050656RH13418219451778053117780725Ratregion
5053725RH142815120560695796069699Ratregion
5053785RH14284916052250816922508329Ratregion
5050836RH13428619751892937218929569Ratregion
5054129RH14304712152431214024312261Ratregion
5053257RH14254412352435378224353905Ratregion
5043950RH130324207596592639659470Ratregion
5044082RH13039918052559691725597097Ratregion
5045074RH130969189534431773443366Ratregion
5045200RH13104119852130174521301943Ratregion
5045354RH13113016652178077221780938Ratregion
5044696RH130751181596178119617992Ratregion
5044796RH13080820052871843928718639Ratregion
5048784RH13310321552276055522760770Ratregion
5046348RH13170118452819745628197637Ratregion
5044484RH13062920351502188215022085Ratregion
5044558RH130672201593459819346182Ratregion
5045406RH131160220551011675101387Ratregion
5046512RH13179621552435145224351667Ratregion
5045180RH13103020751681381616814023Ratregion
5045954RH13147519851951795019518148Ratregion
5046152RH131588190563629306363120Ratregion
5047712RH13248519952442772224427921Ratregion
5048918RH13318118252272493222725114Ratregion
5046622RH13185919952483689024837089Ratregion
5046716RH13191419551473885014739045Ratregion
5046734RH13192418851606835016068538Ratregion
5048028RH13266720951470498414705193Ratregion
5048266RH13280419752401535324015550Ratregion
5039544RH127766217588880258888242Ratregion
5042194RH12929419151951694019517131Ratregion
5039522RH127754241579378147938055Ratregion
5043052RH12980318252442880224428984Ratregion
5039710RH12786220252830682928307031Ratregion
5040672RH128417209531867913187000Ratregion
5040866RH12852921651467966514679881Ratregion
5043498RH13005919951228486512285064Ratregion
5042556RH12950520652292063122921452Ratregion
5042784RH12964418852409089824091086Ratregion
5040942RH12857219252940091929401111Ratregion
5041474RH12887718652830571728305903Ratregion
5072322RH13678216852553659425536762Ratregion
5072432RH13684621452409117224091427Ratregion
5072506RH13688918151675666016756841Ratregion
5075876RH138848152530803383080490Ratregion
5076342RH13912013552409352324093658Ratregion
5072626RH136958217556672725667490Ratregion
5076996RH13949920651987541319875619Ratregion
5075524RH13864312052427083224270952Ratregion
5077142RH13958620552276909522769300Ratregion
5075984RH13891012952277010722770236Ratregion
5075998RH13891817351327157713272664Ratregion
5075066RH13837921452427260524272819Ratregion
5075588RH138681171534437063443875Ratregion
5077450RH13976321451780341917803633Ratregion
5077712RH13991418551933129119331476Ratregion
5077338RH13969920952940045829400667Ratregion
5077374RH139719185527516552751840Ratregion
5077860RH14000118051932381519323995Ratregion
5077392RH13973020552260413922604344Ratregion
5077540RH13981519552561375325613948Ratregion
5078424RH14033414251987540919875551Ratregion
5078432RH14034016151079096110791122Ratregion
5079854RH14124118051642937116429453Ratregion
5079854RH14124118051807330918073391Ratregion
5078594RH14043415152276909522769246Ratregion
5078046RH14011120351464862114648824Ratregion
5070658RH134630193526378162638009Ratregion
5070780RH13470121151517583815176049Ratregion
5070874RH13475518652788457427884760Ratregion
5073130RH137255187534395613439748Ratregion
5079218RH14080414852427206424272212Ratregion
5080252RH14147315051463226414632414Ratregion
5080252RH14147315051463226414632414Ratregion
5070944RH134796186538029063803092Ratregion
5071068RH13486815052435399724354147Ratregion
5080438RH14157921951937866019378879Ratregion
5080464RH14159419451228139912281593Ratregion
5078658RH1404739251473806114738153Ratregion
5071440RH135083180529892932989473Ratregion
5071672RH13521821952187184721872066Ratregion
5071758RH135267211526776542677865Ratregion
5074170RH13786224752554118625541433Ratregion
5072110RH13665618251520593215206114Ratregion
5072110RH13665618251520593215206114Ratregion
5074230RH137896174529576272957801Ratregion
5071462RH135096182575353877535569Ratregion
5071506RH13512118751681917716819364Ratregion
5073692RH13758418052401448724014667Ratregion
5061824AW52717123652476961624769852Ratregion
5065108BF40587822651826690918267135Ratregion
5066642AU04823617752343688623437063Ratregion
5066720AU04819015751109859511098756Ratregion
5066854AU048111176554120905412266Ratregion
5066900AU048084253559098005910048Ratregion
5066986AU04803329151605032816050619Ratregion
5067124AU047949263598356469835906Ratregion
5067436AU047747153566526626652814Ratregion
5067494AU04771020851503440915034617Ratregion
5067660AU04761216151945462119454777Ratregion
5067722AU047575164567414786741642Ratregion
5067732AU04756910252152053421520636Ratregion
5067942AU04744423151721760817218054Ratregion
5068046AU04738013052659820426598334Ratregion
5068412AU04716128251677797716778256Ratregion
5068550AU04707811251374764613747758Ratregion
5069991RH9440617851511031815110494Ratregion
5068986AU04680021451996237219962581Ratregion
5069790AU02867612752395174623951870Ratregion
5062158BE10628222051050382310504043Ratregion
5063596BE10780820251629596216296164Ratregion
5065276BE12133916151932974219329903Ratregion
5062424BF40325520651386018913860395Ratregion
5065472BE11560616853154818231548350Ratregion
5064416BI30215016551288925012889415Ratregion
5062040BE10609015052261660622616756Ratregion
5064350BI30206516851426690914267077Ratregion
5063288BI30167219351548902215489215Ratregion
5066446AU04835221251719810617198318Ratregion
5086268BF41004610151952843419528535Ratregion
5087098BQ20908921552637680726377022Ratregion
5087424STS-D294955551457139014571445Ratregion
5087722Cbfa2t1h19652733498927335185Ratregion
5089781AU049360167597725989772767Ratregion
5082975BF39053417751895532018955497Ratregion
5083159BI27522013252553716725537299Ratregion
5088030Oprk112751386726113867388Ratregion
5088183AU04841725052038911420389364Ratregion
5088191AU048421205540036454003852Ratregion
5090143AU049575217575617507561967Ratregion
5087153BQ20910718351639144716391630Ratregion
5084894AI00926018951957396819574157Ratregion
5087983UniSTS:143722053045590230456083Ratregion
5085561AI23134315052187389621874046Ratregion
5090585AU049839277531705763170853Ratregion
5088753AU04875724151897185518972096Ratregion
5081076RH14195121352250586122506074Ratregion
5085611BM39205421651709276017092976Ratregion
5085900AW53588716052170395221704112Ratregion
5086068AW529472188575339357534123Ratregion
5080804RH141791220563632836363503Ratregion
5082981BF39055615851317448513174643Ratregion
5086238BQ19200018153155454131554721Ratregion
5081360AA92390217752130553321305713Ratregion
5081481AA99856816652181154321811709Ratregion
5083515BF39159212251629085516290977Ratregion
5086687BE10725818152726543827265620Ratregion
5086801BE114642152590453679045519Ratregion
5081947BE118841202550871955087397Ratregion
5081963BE11892616751473999914740166Ratregion
5081965BE11893315052724500227245152Ratregion
5507559RH68043103851342313513424173Ratregion
5503654Rbpj499554656335466132Ratregion
5504340D11S303847852685165926852137Ratregion
5504266G43537142561768146176956Ratregion
5504928Runx1t15252733519227335244Ratregion
5505992UniSTS:49675113152429610724296238Ratregion
5506463GDB:13175647852592491925924997Ratregion
5506473AFM342xc10545921134592784Ratregion
5506553MMP16_92090953154693031547841Ratregion
5506735G4487015651789659617896752Ratregion
5506883G4720419251926619219266384Ratregion
5507181UniSTS:22501415152733436227334513Ratregion
5507313fc12d10.x11402570992757100677Ratregion
5499527stSG60954810052858531728585417Ratregion
5500170D4Mit104052159522921595890Ratregion
5499825UniSTS:23487222352830697528307198Ratregion
5500683D19S909052476216924763167Ratregion
5501848MARC_15705-15706:1013524302:116452491660224916766Ratregion
5502431RH1248149651846945818469554Ratregion
Position Markers

Flank 1: (D5Rat116)
Rat AssemblyChrPosition (strand)Source
mRatBN7.252,138,965 - 2,139,201 (+)MAPPER
Rnor_6.051,525,098 - 1,525,333NCBI
Rnor_5.051,521,341 - 1,521,576UniSTS
RGSC_v3.451,220,773 - 1,221,009RGD
RGSC_v3.451,220,774 - 1,221,009UniSTS
RGSC_v3.151,220,773 - 1,221,009RGD
Celera51,773,867 - 1,774,102UniSTS
SHRSP x BN Map51.1599UniSTS
SHRSP x BN Map51.1599RGD
Peak: (D5Rat125)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2517,397,736 - 17,397,969 (+)MAPPER
Rnor_6.0517,262,946 - 17,263,178NCBI
Rnor_5.0522,043,678 - 22,043,910UniSTS
RGSC_v3.4517,702,961 - 17,703,194RGD
RGSC_v3.4517,702,962 - 17,703,194UniSTS
RGSC_v3.1517,702,962 - 17,703,194RGD
Celera516,740,362 - 16,740,594UniSTS
RH 3.4 Map597.5UniSTS
RH 3.4 Map597.5RGD
SHRSP x BN Map59.2199UniSTS
SHRSP x BN Map59.2199RGD
Flank 2: (D5Rat190)
Rat AssemblyChrPosition (strand)Source
Rnor_5.0529,109,097 - 29,109,277NCBI
RGSC_v3.4524,978,084 - 24,978,263RGD
RGSC_v3.1524,978,084 - 24,978,263RGD
SHRSP x BN Map515.95RGD
SHRSP x BN Map515.95UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1331756Rf34Renal function QTL 344.16275kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)5190450412Rat
70212Niddm25Non-insulin dependent diabetes mellitus QTL 253.54blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)51131345958Rat
1331771Rf35Renal function QTL 354.36965kidney blood vessel physiology trait (VT:0100012)absolute change in renal blood flow rate (CMO:0001168)572947086724018Rat
2312562Pur18Proteinuria QTL 182.60.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)5213896532656739Rat
1576314Eutr1Estrogen induced uterine response QTL 1uterus integrity trait (VT:0010575)pyometritis severity score (CMO:0002009)52138965166875058Rat
631551Vetf1Vascular elastic tissue fragility QTL 150.0001aorta elastic tissue integrity trait (VT:0010556)artery internal elastic lamina non-tumorous lesion count (CMO:0001913)522822265904428Rat
8662454Vetf3Vascular elastic tissue fragility QTL 327.4artery integrity trait (VT:0010639)number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562)5228222669540447Rat
2313085Bss59Bone structure and strength QTL 592.90.0001long bone metaphysis morphology trait (VT:0000133)tibia midshaft total cross-sectional area (CMO:0001715)5384401826141981Rat
1300117Hrtrt8Heart rate QTL 83.49heart pumping trait (VT:2000009)heart rate (CMO:0000002)5384401847869213Rat
61462Niddm10Non-insulin dependent diabetes mellitus QTL 103.90.001blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)5511215947171491Rat
631827Alc4Alcohol consumption QTL 43.5consumption behavior trait (VT:0002069)ethanol drink intake rate (CMO:0001407)5818750118616199Rat
2293666Bmd38Bone mineral density QTL 384.4femur size trait (VT:1000369)femoral neck cortical cross-sectional area (CMO:0001702)5894822853948228Rat
7394712Emca13Estrogen-induced mammary cancer QTL 13mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)5982326699753708Rat
1641903Alcrsp3Alcohol response QTL 3response to alcohol trait (VT:0010489)duration of loss of righting reflex (CMO:0002289)51268928557689285Rat
634305Mamtr1Mammary tumor resistance QTL 10.0001mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)512789751113558310Rat
1600358Mamtr5Mammary tumor resistance QTL 5mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)51887394763873947Rat
1358353Srcrtb2Stress Responsive Cort Basal QTL 23.480.003blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)51887394774251464Rat
8552954Pigfal14Plasma insulin-like growth factor 1 level QTL 149blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)52122674466226744Rat
1549901Neudeg2Neurodegradation QTL 240nervous system integrity trait (VT:0010566)mononuclear cell count (CMO:0002119)52483871044045280Rat
1578767Stresp17Stress response QTL 174.30.01blood aldosterone amount (VT:0005346)plasma aldosterone level (CMO:0000551)52795544072955440Rat
1578776Stresp18Stress response QTL 182.9thymus mass (VT:0004954)thymus wet weight (CMO:0000855)52795544072955440Rat
6903292Stl28Serum triglyceride level QTL 282.60.0073blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)52851548973515489Rat
6903306Scl35Serum cholesterol QTL 352.60.0073blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)52851548973515489Rat
2290448Scl54Serum cholesterol level QTL 542.93blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)531663789131345958Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type backcross  
qtl_general measurement method: animals were injected with (2mg/kg body wt) anti-Thy1.1 ER4 antibody; after 24 hrs (day 0) urine samples were collected and total protein content determined by the biuret method 2312422
qtl_general inducing agent: anti-Thy-1 glomerulonephritis (antiThy1.1 ER4G) 2312422
qtl_general number of animals used: 145 females 2312422
qtl_general software used: phenotypic distribution by Kolmogorov-Smirnov test; QTL mapping by MapMaker 2312422