Glom17 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL: Glom17 (Glomerulus QTL 17) Rattus norvegicus

Symbol: Glom17
Name: Glomerulus QTL 17
RGD ID: 2312558
Previously known as: glomerular damage score day 21; GDS day 21
Trait: kidney glomerulus morphology trait   (VT:0005325)    
Measurement Type: index of glomerular damage   (CMO:0001135)    
LOD Score: 3.9
P Value: 0.001
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21166,532,971 - 191,278,129RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01177,235,071 - 208,786,962RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01184,213,481 - 215,717,121RGDRnor5.0
RGSC_v3.41170,218,208 - 201,628,746RGDRGSC3.4
Cross Type: backcross
Strains Crossed: LEW/Maas LEW/Mol 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition
antibody  (IDA)

Vertebrate Trait

Rat Strain
LEW/Maas  (IEA)
LEW/Mol  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Genetic predisposition for glomerulonephritis-induced glomerulosclerosis in rats is linked to chromosome 1. Ijpelaar DH, etal., Physiol Genomics. 2008 Oct 8;35(2):173-81. Epub 2008 Aug 5.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
71021Parvaparvin, alpha1166547142166704958Rat
41376786LOC120100416small nucleolar RNA SNORA171166729024166729154Rat
1549742Tead1TEA domain transcription factor 11166791900167010591Rat
41147698LOC120099907NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like1166888513166888812Rat
40927122LOC120099908uncharacterized LOC1200999081166913881166916228Rat
1309847Rassf10Ras association domain family member 101167058277167063591Rat
7694563LOC102547978uncharacterized LOC1025479781167177345167193454Rat
1587415Ckap2-ps3cytoskeleton-associated protein 2, pseudogene 31167203062167213037Rat
41245374LOC120099909uncharacterized LOC1200999091167221216167259345Rat
62003Bmal1basic helix-loop-helix ARNT like 11167331756167430235Rat
1306301Btbd10BTB domain containing 101167431311167489320Rat
40976055Rnu6-26RNA, U6 small nuclear 261167476849167476955Rat
3440Pthparathyroid hormone1167508121167511530Rat
1598284Eno1-ps9enolase 1, pseudogene 91167611484167612975Rat
1306647Far1fatty acyl CoA reductase 11167644622167705868Rat
41120816LOC120099910cytochrome c, somatic-like1167660539167660823Rat
7538108LOC102548137uncharacterized LOC1025481371167724321167750850Rat
1598217Metap2-ps3methionyl aminopeptidase 2, pseudogene 31167766146167768505Rat
7593729LOC102548271uncharacterized LOC1025482711167886561167901539Rat
619918Spon1spondin 11167929049168228239Rat
11466449LOC10834962060S ribosomal protein L31 pseudogene1168146986168147396Rat
1310793Rras2RAS related 21168233693168303111Rat
1598283Rpl27a-ps4ribosomal protein L27a, pseudogene 41168336483168336924Rat
1586255Rps14-ps6ribosomal protein S14, pseudogene 61168339073168339543Rat
1565301Rps18l4ribosomal protein S18-like 41168385938168386642Rat
620861Copb1COPI coat complex subunit beta 11168404334168438589Rat
61841Psma1proteasome 20S subunit alpha 11168442421168453440Rat
41368180Atp5mj-ps1ATP synthase membrane subunit j, pseudogene 11168472019168472630Rat
61943Pde3bphosphodiesterase 3B1168606762168770078Rat
7667300LOC102548890ubiquitin-like protein FUBI-like1168627468168627978Rat
1311866Cyp2r1cytochrome P450, family 2, subfamily r, polypeptide 11168749302168798079Rat
2254Calcacalcitonin-related polypeptide alpha1168878212168883176Rat
620997Calcbcalcitonin-related polypeptide, beta1168965383168970259Rat
1311379InscINSC, spindle orientation adaptor protein1168993032169100438Rat
40942999LOC120100423small nucleolar RNA SNORA171169083085169083212Rat
41367209LOC120097959uncharacterized LOC1200979591169464515169471269Rat
1309000Sox6SRY-box transcription factor 61169723306170334846Rat
40995085Trnav-aac35transfer RNA valine (anticodon AAC) 351169956121169956193Rat
1311703C1h11orf58similar to human chromosome 11 open reading frame 581170334950170346864Rat
1598216Plekha7pleckstrin homology domain containing A71170364524170547843Rat
41271539LOC120099912uncharacterized LOC1200999121170546748170550493Rat
621027Rps13ribosomal protein S131170572925170575355Rat
41025316Snord14asmall nucleolar RNA, C/D box 14A1170574389170574475Rat
1310389Pik3c2aphosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha1170577942170684353Rat
6494996LOC100911093CCA tRNA nucleotidyltransferase 1, mitochondrial-like1170720730170722745Rat
620888Nucb2nucleobindin 21170750830170787356Rat
41201048Rnu6-651RNA, U6 small nuclear 6511170936910170937016Rat
41154129LOC120100415small nucleolar RNA SNORA171171168503171168634Rat
41035175LOC120097960uncharacterized LOC1200979601171287279171301330Rat
6486912Ybx1l1Y box binding protein 1 like 11171304587171306092Rat
620093Xylt1xylosyltransferase 11171643925171929774Rat
1586193Gapdh-ps109Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 1091172292417172292996Rat
619939Rps15aribosomal protein S15a1172420151172427021Rat
735205Arl6ip1ADP-ribosylation factor like GTPase 6 interacting protein 11172430475172439990Rat
1563508Smg1SMG1, nonsense mediated mRNA decay associated PI3K related kinase1172441892172543667Rat
7544889LOC102549940uncharacterized LOC1025499401172626577172632763Rat
41302139LOC120099915uncharacterized LOC1200999151172632858172636221Rat
6503302Clec19aC-type lectin domain containing 19A1172667793172677953Rat
708576Syt17synaptotagmin 171172695275172761906Rat
1564255Itpripl2ITPRIP like 21172801152172803047Rat
41171220LOC120099916uncharacterized LOC1200999161172832432172841087Rat
2381Coq7coenzyme Q7, hydroxylase1172836359172851173Rat
1564267Tmc7transmembrane channel-like 71172853531172905796Rat
7701116LOC102550534ubiquitin-like protein FUBI-like1172860549172861181Rat
41283769LOC120099917uncharacterized LOC1200999171172905921172914944Rat
1307037Tmc5transmembrane channel-like 51172914915172999478Rat
621788Gde1glycerophosphodiester phosphodiesterase 11173016984173032396Rat
1310509Ccp110centriolar coiled-coil protein 1101173042238173072873Rat
1564485Vps35lVPS35 endosomal protein sorting factor like1173076219173179663Rat
41014644LOC120100364small nucleolar RNA SNORA241173170301173170415Rat
1565096Knop1lysine-rich nucleolar protein 11173180400173199253Rat
6502881IqckIQ motif containing K1173199308173316982Rat
41297868LOC120100373small nucleolar RNA SNORA441173218181173218293Rat
1309510Gprc5bG protein-coupled receptor, class C, group 5, member B1173316904173340933Rat
7553300LOC102550985uncharacterized LOC1025509851173325465173358499Rat
1311729Gpr139G protein-coupled receptor 1391173478137173522615Rat
41149238LOC120100417small nucleolar RNA SNORA171173643130173643260Rat
621695Gp2glycoprotein 21173797057173812619Rat
3940Umoduromodulin1173816341173829681Rat
1307822Pdiltprotein disulfide isomerase-like, testis expressed1173837477173868685Rat
1309578Acsm5acyl-CoA synthetase medium-chain family member 51173870873173896838Rat
708383Acsm2acyl-CoA synthetase medium-chain family member 21173916368173955116Rat
1559600RGD1559600RGD15596001173973318173988758Rat
1306813Acsm1acyl-CoA synthetase medium-chain family member 11173985715174020565Rat
7656358LOC102551259uncharacterized LOC1025512591173998998174001331Rat
727928Acsm4acyl-CoA synthetase medium-chain family member 41174053931174078345Rat
1308854Thumpd1THUMP domain containing 11174078875174084915Rat
62086Acsm3acyl-CoA synthetase medium-chain family member 31174133260174159966Rat
1583889Eri2ERI1 exoribonuclease family member 21174140831174168757Rat
1305412Rexo5RNA exonuclease 51174168633174264526Rat
1308893Dcun1d3defective in cullin neddylation 1 domain containing 31174243001174285647Rat
1563498Lyrm1LYR motif containing 11174284116174305053Rat
1305855Dnah3dynein, axonemal, heavy chain 31174305929174479490Rat
41178995LOC120100199U6 spliceosomal RNA1174355676174355782Rat
41128770LOC120099919uncharacterized LOC1200999191174417870174439858Rat
7670154Rpa3-ps1replication protein A3, pseudogene 11174474378174475061Rat
727895Ldaf1lipid droplet assembly factor 11174484438174503037Rat
620605Zp2zona pellucida glycoprotein 21174513507174525288Rat
1584204Anks4bankyrin repeat and sterile alpha motif domain containing 4B1174534195174557798Rat
620943Crymcrystallin, mu1174560423174575660Rat
1561491Abca14ATP-binding cassette, subfamily A (ABC1), member 141174577466174683407Rat
1305981Abca15ATP-binding cassette, subfamily A (ABC1), member 151174686666174794395Rat
1588550Hspd1-ps5heat shock protein family D (Hsp60) member 1, pseudogene 51174752712174754893Rat
1563534Abca16ATP-binding cassette, subfamily A (ABC1), member 161174795054174975193Rat
1598215Hnrnpa1-ps9heterogeneous nuclear ribonucleoprotein A1, pseudogene 91174829774174831052Rat
1582803Vmn2r116l-ps36vomeronasal 2, receptor 116 like, pseudogene 361174983856174997928Rat
1582795Ankrd62lankyrin repeat domain 62 like1175074189175162056Rat
40927136Rpl36-ps12ribosomal protein L36, pseudogene1175156882175167650Rat
1359150Uqcrc2ubiquinol cytochrome c reductase core protein 21175167933175198499Rat
1560558Pdzd9PDZ domain containing 91175188270175217491Rat
7606925Mosmomodulator of smoothened1175217680175288521Rat
41159195LOC120100485small nucleolar RNA U131175228635175228731Rat
7663810LOC102555900uncharacterized LOC1025559001175279154175293597Rat
1311670Vwa3avon Willebrand factor A domain containing 3A1175293782175355588Rat
41319484LOC120099921uncharacterized LOC1200999211175343435175352194Rat
6504299Sdr42e2short chain dehydrogenase/reductase family 42E, member 21175361630175382769Rat
11390492Trnal-uag1transfer RNA leucine (anticodon UAG) 11175386163175386244Rat
7669860LOC102556194uncharacterized LOC1025561941175389733175392998Rat
2538Eef2keukaryotic elongation factor-2 kinase1175393119175456756Rat
11384146Trnal-aag1transfer RNA leucine (anticodon AAG) 11175465857175465938Rat
1308086Polr3eRNA polymerase III subunit E1175466091175494679Rat
1310578Cdr2cerebellar degeneration-related protein 21175502837175527746Rat
1582763Mfsd13bmajor facilitator superfamily domain containing 13B1175528077175560263Rat
40990662LOC120100377small nucleolar RNA SNORA211175531005175531140Rat
40962139LOC120100397small nucleolar RNA SNORA481175549477175549618Rat
41267784LOC120100194U6 spliceosomal RNA1175567629175567731Rat
2311609Mettl9methyltransferase 9, His-X-His N1(pi)-histidine1175575805175623065Rat
620663Igsf6immunoglobulin superfamily, member 61175610167175620662Rat
1562741Otoaotoancorin1175642978175710528Rat
11383913LOC108349630uncharacterized LOC1083496301175811711175851645Rat
727787Hs3st2heparan sulfate-glucosamine 3-sulfotransferase 21175956161176077400Rat
41305885Gapdh-ps59Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 591175984378175985956Rat
41380449LOC120099923uncharacterized LOC1200999231176077141176106686Rat
1308183Usp31ubiquitin specific peptidase 311176211334176278183Rat
3641Scnn1gsodium channel epithelial 1 subunit gamma1176304942176338816Rat
3640Scnn1bsodium channel epithelial 1 subunit beta1176430063176484451Rat
1566058Cog7component of oligomeric golgi complex 71176489795176549455Rat
1304800Gga2golgi associated, gamma adaptin ear containing, ARF binding protein 21176552046176585332Rat
1307904Ears2glutamyl-tRNA synthetase 2, mitochondrial1176597986176625848Rat
1306614Ubfd1ubiquitin family domain containing 11176626003176640993Rat
1305619Ndufab1NADH:ubiquinone oxidoreductase subunit AB11176644696176658131Rat
1304759Palb2partner and localizer of BRCA21176665076176689053Rat
1305654Dctn5dynactin subunit 51176689176176705907Rat
3352Plk1polo-like kinase 11176716420176726400Rat
1308743Ern2endoplasmic reticulum to nucleus signaling 21176726454176743289Rat
727796Chp2calcineurin-like EF hand protein 21176757945176772443Rat
3396Prkcbprotein kinase C, beta1176832173177163539Rat
628803Cacng3calcium voltage-gated channel auxiliary subunit gamma 31177201361177297019Rat
41223864LOC120099927uncharacterized LOC1200999271177281328177289987Rat
1311964Rbbp6RB binding protein 6, ubiquitin ligase1177503988177537397Rat
1307268Tnrc6atrinucleotide repeat containing adaptor 6A1177561898177715669Rat
41045503Rnu6-799RNA, U6 small nuclear 7991177586062177586168Rat
40946073LOC120099930uncharacterized LOC1200999301177624419177630543Rat
621410Slc5a11solute carrier family 5 member 111177735511177795193Rat
628767Arhgap17Rho GTPase activating protein 171177807579177897027Rat
735118Lcmt1leucine carboxyl methyltransferase 11177904119177960111Rat
2146Aqp8aquaporin 81177993313177999158Rat
1359568Zkscan2zinc finger with KRAB and SCAN domains 21178006003178028239Rat
1598214Pkm-ps17pyruvate kinase M1/2, pseudogene 171178160227178162181Rat
11422907Hs3st4heparan sulfate-glucosamine 3-sulfotransferase 41178539078178944850Rat
41216593LOC120100422small nucleolar RNA SNORA171178691996178692130Rat
11380105Rpl32-ps5ribosomal protein L32, pseudogene 51178932751178934454Rat
41171888LOC120100410small nucleolar RNA SNORA481179035249179035391Rat
1304666Paip2l1polyadenylate-binding protein-interacting protein 2-like 11179077576179079040Rat
1596000Rps15a-ps9ribosomal protein S15a, pseudogene 91179267937179268386Rat
1598282Hsp90aa1-ps12heat shock protein 90 alpha family class A member 1, pseudogene 121179298331179300568Rat
9134980LOC103691232uncharacterized LOC1036912321179491910179525433Rat
9467587LOC103695038uncharacterized LOC1036950381179567858179588897Rat
7565604LOC102548041uncharacterized LOC1025480411179870042179895619Rat
2304343C1h16orf82similar to human chromosome 16 open reading frame 821179913067179915467Rat
41343776LOC120097358uncharacterized LOC1200973581180007548180011104Rat
1304823Kdm8lysine demethylase 81180013969180028829Rat
1307760Nsmce1NSE1 homolog, SMC5-SMC6 complex component1180030355180058541Rat
9122392LOC103691233uncharacterized LOC1036912331180060750180065930Rat
2899Il4rinterleukin 4 receptor1180115061180139981Rat
41057227LOC120097359uncharacterized LOC1200973591180145598180148961Rat
1304950Il21rinterleukin 21 receptor1180168028180195690Rat
621048Gtf3c1general transcription factor IIIC subunit 11180203995180270201Rat
1595846Katnipkatanin interacting protein1180270194180436766Rat
1562278Gsg1lGSG1-like1180440398180654342Rat
1311491Xpo6exportin 61180672114180761543Rat
11508576LOC108349639uncharacterized LOC1083496391180764861180777765Rat
41179471LOC120099931uncharacterized LOC1200999311180777618180793202Rat
11478799LOC108349640uncharacterized LOC1083496401180783169180807007Rat
628713Sbk1SH3 domain binding kinase 11180807092180851910Rat
7541351LOC102548820uncharacterized LOC1025488201180906441180915707Rat
620802Latlinker for activation of T cells1180936536180941561Rat
1305613Spns1SPNS lysolipid transporter 1, lysophospholipid1180942088180949415Rat
1359096Nfatc2ipnuclear factor of activated T-cells 2 interacting protein1180954834180971847Rat
2320900Rpl36l3ribosomal protein L36 like 31180985733180986204Rat
1309086Cd19CD19 molecule1180987286180993920Rat
621416Rabep2rabaptin, RAB GTPase binding effector protein 21181010305181026651Rat
621293Atp2a1ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 11181026606181044859Rat
620132Sh2b1SH2B adaptor protein 11181048622181057036Rat
1305501TufmTu translation elongation factor, mitochondrial1181073788181077395Rat
1565868Atxn2lataxin 2-like1181078293181090079Rat
3118Mt1-ps1metallothionein 1, pseudogene 11181132896181133270Rat
1308871Eif3ceukaryotic translation initiation factor 3, subunit C1181134604181152489Rat
41098606LOC120100182U6 spliceosomal RNA1181153246181153352Rat
1359537Cln3CLN3 lysosomal/endosomal transmembrane protein, battenin1181156071181169458Rat
1565169Apobrapolipoprotein B receptor1181169019181173206Rat
1561420Il27interleukin 271181173108181178720Rat
41126597Rnu2-62RNA, U2 small nuclear 621181189588181189777Rat
1597558Rpl36a-ps16ribosomal protein L36A, pseudogene 161181198779181200729Rat
69363Nupr1nuclear protein 1, transcriptional regulator1181213292181215327Rat
1310609Sgf29SAGA complex associated factor 291181238458181271931Rat
1595928Dppa3l3developmental pluripotency associated 3 like 31181255033181256222Rat
3767Sult1a1sulfotransferase family 1A member 11181272022181276750Rat
1311568Slx1bSLX1 homolog B, structure-specific endonuclease subunit1181286190181291739Rat
1565363Bola2bolA family member 21181291967181292833Rat
620009Coro1acoronin 1A1181295561181300566Rat
11363866LOC108349642uncharacterized LOC1083496421181314109181322318Rat
3046Mapk3mitogen activated protein kinase 31181366646181372863Rat
1308386Gdpd3glycerophosphodiester phosphodiesterase domain containing 31181373505181383063Rat
1564579Ypel3yippee-like 31181384385181387706Rat
1307716Tbx6T-box transcription factor 61181387851181392762Rat
621225Ppp4cprotein phosphatase 4, catalytic subunit1181392899181399703Rat
2089Aldoaaldolase, fructose-bisphosphate A1181402275181407476Rat
9213265LOC103691235uncharacterized LOC1036912351181402275181421545Rat
41298058LOC120100124U6 spliceosomal RNA1181409122181409228Rat
1308215Tlcd3bTLC domain containing 3B1181421104181439744Rat
1563217C1h16orf92similar to human chromosome 16 open reading frame 921181434524181441000Rat
620518Doc2adouble C2 domain alpha1181457415181462528Rat
1359572Ino80eINO80 complex subunit E1181461406181472059Rat
1306463Hirip3HIRA interacting protein 31181472537181475082Rat
621590Taok2TAO kinase 21181475708181494738Rat
1560566Tmem219transmembrane protein 2191181496195181509259Rat
11415131LOC108349643uncharacterized LOC1083496431181508682181514176Rat
735189Kctd13potassium channel tetramerization domain containing 131181534534181552843Rat
1306636Asphd1aspartate beta-hydroxylase domain containing 11181552968181556902Rat
1565281Sez6l2seizure related 6 homolog like 21181557109181577456Rat
7676737CdiptosCDIP transferase, opposite strand1181579385181583017Rat
620576CdiptCDP-diacylglycerol--inositol 3-phosphatidyltransferase1181583098181587409Rat
70932Mvpmajor vault protein1181594734181622336Rat
1305592Pagr1Paxip1-associated glutamate-rich protein 11181622698181625024Rat
1564195Prrt2proline-rich transmembrane protein 21181625243181628833Rat
1594632MazMYC associated zinc finger protein1181629742181635193Rat
1311886Kif22kinesin family member 221181635347181650351Rat
11480240LOC108349644uncharacterized LOC1083496441181649574181655535Rat
620346Zg16zymogen granule protein 161181657722181660079Rat
1591907Psme2-ps3proteasome activator subunit 2, pseudogene 31181699598181701538Rat
1564503C1h16orf54similar to human chromosome 16 open reading frame 541181702447181705128Rat
1310309Qprtquinolinate phosphoribosyltransferase1181718189181733486Rat
40974486LOC120099934uncharacterized LOC1200999341181728557181731580Rat
3750Spnsialophorin1181746937181759564Rat
1311741Cd2bp2Cd2 (cytoplasmic tail) binding protein 21181809399181815269Rat
1309191Tbc1d10bTBC1 domain family, member 10b1181814972181826628Rat
3141Myl11myosin light chain 111181829703181832546Rat
1307216Septin1septin 11181832700181836566Rat
9115869Znf48zinc finger protein 481181854481181858987Rat
1305903Zfp771zinc finger protein 7711181864035181875136Rat
620933Dctpp1dCTP pyrophosphatase 11181877440181880833Rat
1308827Sephs2selenophosphate synthetase 21181893146181895464Rat
1598280Ndufa13-ps4NADH:ubiquinone oxidoreductase subunit A13, pseudogene 41181908186181908668Rat
2319903Ankrd37-ps1ankyrin repeat domain 37, pseudogene 11181915673181916779Rat
631424Itgalintegrin subunit alpha L1181918183181955735Rat
7609558Zfp768zinc finger protein 7681181966314181968950Rat
1594599Zfp764l1zinc finger protein 764 like 11182003282182005886Rat
7540019Zfp764zinc finger protein 7641182009002182013169Rat
9416532LOC103695040eukaryotic translation initiation factor 1 pseudogene1182013409182018191Rat
7690555Odc1-ps5ornithine decarboxylase 1, pseudogene 51182021072182023661Rat
1310765Zfp688zinc finger protein 6881182039366182043035Rat
628696Zfp689zinc finger protein 6891182065885182074343Rat
1594592Prr14proline rich 141182083838182089330Rat
1594591Fbrsfibrosin1182090741182104026Rat
41270294LOC120099937uncharacterized LOC1200999371182104306182122935Rat
1565642SrcapSnf2-related CREBBP activator protein1182123562182172643Rat
41103194Snora30small nucleolar RNA, H/ACA box 301182139388182139521Rat
7523242Tmem265transmembrane protein 2651182172704182176600Rat
620024Phkg2phosphorylase kinase catalytic subunit gamma 21182184362182197124Rat
1593368Cfap119cilia and flagella associated protein 1191182197171182216936Rat
628638Rnf40ring finger protein 401182202475182217899Rat
1306257Zfp629zinc finger protein 6291182217499182258585Rat
41326170LOC1201003285S ribosomal RNA1182252145182252263Rat
1308439Bcl7cBAF chromatin remodeling complex subunit BCL7C1182277163182324274Rat
9685081Mir762microRNA 7621182323863182323937Rat
2442Ctf1cardiotrophin 11182328035182336346Rat
1308254Ctf2cardiotrophin 21182334061182342406Rat
1310989Fbxl19F-box and leucine-rich repeat protein 191182356899182380839Rat
1306538Orai3ORAI calcium release-activated calcium modulator 31182381196182386055Rat
1311624Setd1aSET domain containing 1A, histone lysine methyltransferase1182386197182411695Rat
628727Hsd3b7hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 71182412216182415447Rat
3784Stx1bsyntaxin 1B1182415544182434385Rat
621019Stx4syntaxin 41182451108182459701Rat
1308623Zfp668zinc finger protein 6681182474633182484957Rat
1561579Zfp646zinc finger protein 6461182485009182494961Rat
1566127Prss53serine protease 531182494944182501607Rat
1303107Vkorc1vitamin K epoxide reductase complex, subunit 11182502491182505012Rat
2198Bckdkbranched chain ketoacid dehydrogenase kinase1182515335182520007Rat
1311512Kat8lysine acetyltransferase 81182524355182536638Rat
619973Prss8serine protease 81182536229182540745Rat
1593186Prss36serine protease 361182543085182561141Rat
1308864FusFus RNA binding protein1182576479182590417Rat
628637PycardPYD and CARD domain containing1182601657182603013Rat
41368305LOC120099938uncharacterized LOC1200999381182611965182616488Rat
1562778Trim72tripartite motif containing 721182613753182621613Rat
41367722LOC120099939uncharacterized LOC1200999391182637160182642709Rat
7624587LOC102556135uncharacterized LOC1025561351182651431182657380Rat
41357835Rnu1-140RNA, U1 small nuclear 1401182658147182658307Rat
2926Itgamintegrin subunit alpha M1182659047182709501Rat
1561123Itgaxintegrin subunit alpha X1182709653182740709Rat
71075Itgadintegrin subunit alpha D1182759762182788422Rat
2385Cox6a2cytochrome c oxidase subunit 6A21182788528182790746Rat
90746049130023H24RikRIKEN cDNA 9130023H24 gene like1182809465182820548Rat
1306553Armc5armadillo repeat containing 51182820141182826913Rat
620173Tgfb1i1transforming growth factor beta 1 induced transcript 11182828553182835465Rat
620217Slc5a2solute carrier family 5 member 21182847185182853309Rat
1310127Rusf1RUS family member 11182852257182881652Rat
1306725Ahspalpha hemoglobin stabilizing protein1182879901182885508Rat
40967984LOC120099940uncharacterized LOC1200999401182890478182896780Rat
9242866LOC103691239uncharacterized LOC1036912391182934054182937398Rat
3562Rgs10regulator of G-protein signaling 101182946334182987729Rat
1595845Tial1Tia1 cytotoxic granule-associated RNA binding protein-like 11183008358183045092Rat
1596229Rps2-ps13ribosomal protein S2, pseudogene 131183041102183041973Rat
11482889LOC10834978340S ribosomal protein S19 pseudogene1183046566183051192Rat
1307794Bag3BAG cochaperone 31183103038183126862Rat
1305777Inpp5finositol polyphosphate-5-phosphatase F1183190480183270276Rat
1306730Mcmbpminichromosome maintenance complex binding protein1183270598183316975Rat
41171707LOC120100354small nucleolar RNA SNORA36 family1183310598183310728Rat
1309328Sec23ipSEC23 interacting protein1183320950183363944Rat
41346008LOC120100487small nucleolar RNA U1091183371628183371752Rat
11426694LOC108349652uncharacterized LOC1083496521183588849183601186Rat
1306289Plpp4phospholipid phosphatase 41183829794183959319Rat
1593335Parl-ps1presenilin associated, rhomboid-like, pseudogene 11183970720183973464Rat
41149849LOC120098013uncharacterized LOC1200980131184024534184029616Rat
9370590LOC103691243uncharacterized LOC1036912431184081122184090817Rat
1587347Wdr11WD repeat domain 111184165260184210834Rat
41136694LOC120099941uncharacterized LOC1200999411184226008184228759Rat
7704573Ska2l1spindle and kinetochore associated complex subunit 2 like 11184226732184300750Rat
7732136LOC102555965uncharacterized LOC1025559651184499296184507745Rat
41270156LOC120100399small nucleolar RNA SNORA481184576350184576490Rat
2611Fgfr2fibroblast growth factor receptor 21184745418184850655Rat
6494949LOC100911081uncharacterized LOC1009110811184919721184921647Rat
1309335Ate1arginyltransferase 11184961548185081112Rat
11478122LOC108349649glyceraldehyde-3-phosphate dehydrogenase pseudogene1185016384185017383Rat
1563285RGD1563285similar to RIKEN cDNA 1700022C211185084823185091961Rat
1309025Nsmce4aNSE4 homolog A, SMC5-SMC6 complex component1185102075185109166Rat
1303004Tacc2transforming, acidic coiled-coil containing protein 21185139223185327881Rat
41366349Trnap-agg25transfer RNA proline (anticodon AGG) 251185164152185164232Rat
9097294LOC103691241uncharacterized LOC1036912411185235012185242949Rat
1311454Btbd16BTB domain containing 161185334971185389518Rat
1564153Plekha1pleckstrin homology domain containing A11185427982185479157Rat
69235Htra1HtrA serine peptidase 11185497815185547380Rat
61984Dmbt1deleted in malignant brain tumors 11185617469185696476Rat
1562283C1h10orf120similar to human chromosome 10 open reading frame 1201185910420185913478Rat
1593322Dmbt1l1deleted in malignant brain tumors 1 like 11185949897186084340Rat
41186776LOC120100418small nucleolar RNA SNORA171186086712186086840Rat
619771Cuzd1CUB and zona pellucida-like domains 11186089422186130536Rat
1559891Sycp3l1synaptonemal complex protein 3 like 11186108544186111598Rat
1560958Fam24bfamily with sequence similarity 24 member B1186112544186115957Rat
1560948Fam24afamily with sequence similarity 24, member A1186119918186122932Rat
1305014C1h10orf88similar to human chromosome 10 open reading frame 881186132360186149932Rat
1564300Pstkphosphoseryl-tRNA kinase1186157730186168145Rat
1310965Ikzf5IKAROS family zinc finger 51186169108186188847Rat
2013Acadsbacyl-CoA dehydrogenase, short/branched chain1186188939186227796Rat
41100855Mospd3-ps1motile sperm domain containing 3, pseudogene 11186237011186249134Rat
1559927Hmx3H6 family homeobox 31186313237186315201Rat
1565366Hmx2H6 family homeobox 21186319110186326771Rat
1306654Bub3BUB3 mitotic checkpoint protein1186330358186340969Rat
41206132LOC120099942uncharacterized LOC1200999421186614202186617524Rat
619843Gpr26G protein-coupled receptor 261186766001186805435Rat
1310955Cpxm2carboxypeptidase X (M14 family), member 21186836797186947222Rat
41328408Rps27-ps7ribosomal protein S27, pseudogene 71186877655186877923Rat
7665911LOC102551752uncharacterized LOC1025517521186961903186967497Rat
628881Chst15carbohydrate sulfotransferase 151187028860187107908Rat
41353902Trnaa-agc75transfer RNA alanine (anticodon AGC) 751187277128187277208Rat
1586192Cfl1-ps5cofilin 1, pseudogene 51187296660187297219Rat
11499736LOC10834852260S ribosomal protein L27 pseudogene1187299584187299998Rat
621724Oatornithine aminotransferase1187347862187367644Rat
1306744Nkx1-2NK1 homeobox 21187386370187391252Rat
1359187Lhppphospholysine phosphohistidine inorganic pyrophosphate phosphatase1187403390187494577Rat
41012033LOC120099944uncharacterized LOC1200999441187432306187435276Rat
41017423LOC120099945uncharacterized LOC1200999451187480900187493664Rat
1310799Fam53bfamily with sequence similarity 53, member B1187500061187591186Rat
7589362LOC102552031uncharacterized LOC1025520311187595895187599379Rat
1306300Eef1akmt2EEF1A lysine methyltransferase 21187616156187640934Rat
1308918Abraxas2abraxas 2, BRISC complex subunit1187647078187672660Rat
1565272Rps23-ps4ribosomal protein S23, pseudogene 41187683563187684283Rat
2321751Zranb1zinc finger RANBP2-type containing 11187725354187780129Rat
68372Ctbp2C-terminal binding protein 21187782064187918115Rat
11454674LOC108349784ATP synthase subunit g, mitochondrial pseudogene1188001281188001656Rat
11364130LOC108349861high mobility group protein B1 pseudogene1188005315188006052Rat
7622122LOC102552773uncharacterized LOC1025527731188120174188148128Rat
1566410Tex36testis expressed 361188390062188404448Rat
41380058LOC120099946uncharacterized LOC1200999461188404479188404948Rat
9132574LOC103690347uncharacterized LOC1036903471188411066188424673Rat
7749502LOC102552907uncharacterized LOC1025529071188413379188420695Rat
1306820Edrf1erythroid differentiation regulatory factor 11188441514188478743Rat
1309332Mmp21matrix metallopeptidase 211188480186188485855Rat
1310396Urosuroporphyrinogen III synthase1188490832188513659Rat
1307362BccipBRCA2 and CDKN1A interacting protein1188512544188524957Rat
1311740Dhx32DEAH-box helicase 32 (putative)1188524512188577500Rat
1304756Fank1fibronectin type III and ankyrin repeat domains 11188577512188685501Rat
1583652Adam12ADAM metallopeptidase domain 121188686984189014206Rat
2322921Nmur1-ps1neuromedin U receptor 1, pseudogene 11188988752188990053Rat
2311471C1h10orf90similar to human chromosome 10 open reading frame 901189059744189293353Rat
40979906LOC120100145U6 spliceosomal RNA1189412198189412304Rat
1566072Dock1dedicator of cyto-kinesis 11189467143189983777Rat
2302685Insyn2ainhibitory synaptic factor 2A1189697856189753194Rat
41343059LOC120100426small nucleolar RNA SNORA171189941598189941726Rat
9439981LOC103691254ubiquitin-conjugating enzyme E2 L3 pseudogene1189951742189954254Rat
2324597Npsneuropeptide S1190077040190080821Rat
7744082LOC102551753uncharacterized LOC1025517531190139001190144141Rat
621739Foxi2forkhead box I21190222857190226657Rat
1305043Clrn3clarin 31190319025190334648Rat
620771Ptpreprotein tyrosine phosphatase, receptor type, E1190344331190494815Rat
7725240LOC102551963uncharacterized LOC1025519631190441582190458258Rat
1305476Mki67marker of proliferation Ki-671190496319190522983Rat
11446129LOC108349660uncharacterized LOC1083496601190980953191004779Rat
7694619LOC102552157uncharacterized LOC1025521571191017034191039381Rat
41399316LOC120099949uncharacterized LOC1200999491191146405191161742Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10138D1Arb191891181406902181407091Ratregion
10273D1Smu111168879333168879526Ratregion
10580D1Smu51184740646184740858Ratregion
10818D1Smu101271182657959182658086Ratregion
10923D1Wox191551181133855181134010Ratregion
10951D1Mit133401181829673181830018Ratregion
10952D1Wox211041181829824181829932Ratregion
10953D1Arb183471181829744181830126Ratregion
10954D1Wox321881181829796181829988Ratregion
11142D1Smu91711177061421177061592Ratregion
11185D1Wox351591167512327167512481Ratregion
11270D1Smu81291176447349176447478Ratregion
11271D1Smu71431176447730176447875Ratregion
34300D1Mgh261371172711200172711337Ratregion
34399D1Mgh91391172949660172949803Ratregion
11359D1Arb212551182418219182418476Ratregion
11360D1Got1651461182416572182416718Ratregion
37228D1Rat2371271171754764171754905Ratregion
37244D1Rat2212361171400852171401211Ratregion
37244D1Rat2212361171400871171401211Ratregion
37434D1Rat2051051171869685171869803Ratregion
37556D1Rat1301541185145134185145286Ratregion
37560D1Rat1551431177227632177227779Ratregion
35174D1Rat661491179567751179567900Ratregion
35346D1Rat651471180381412180381541Ratregion
35413D1Rat603441171602489171602793Ratregion
35515D1Rat611661172925402172925523Ratregion
35515D1Rat611661172925402172925573Ratregion
35535D1Rat1101371185635395185635534Ratregion
37134D1Rat3572481171780469171780726Ratregion
37182D1Rat1872391170764529170764749Ratregion
37732D1Rat2082171191019702191019931Ratregion
37740D1Rat2331621172916873172917035Ratregion
37748D1Rat1201991183520307183520518Ratregion
37834D1Rat1642381166532971166533203Ratregion
37870D1Rat1701341177061447177061563Ratregion
36402D1Mgh361341177780650177780784Ratregion
36454D1Rat561651169112897169113045Ratregion
36480D1Rat591371169464638169464773Ratregion
36592D1Rat641771180359209180359386Ratregion
36606D1Rat581701173436472173436651Ratregion
36636D1Rat671741184158914184159091Ratregion
36719D1Rat1081481179773921179774069Ratregion
35150D1Rat571481173421600173421758Ratregion
35851D1Rat681561188377360188377506Ratregion
35937D1Rat621751174507659174507834Ratregion
39852D1Rat2821571172045948172046105Ratregion
38182D1Rat1981991180633892180634097Ratregion
38186D1Rat2041741166643448166643622Ratregion
38192D1Rat2192481183970203183970443Ratregion
38340D1Rat1492121172630369172630576Ratregion
40486D1Rat4371381176426412176426554Ratregion
40700D1Rat2902061190292090190292292Ratregion
40720D1Rat2811181169923731169923880Ratregion
38406D1Rat1742001172286874172287068Ratregion
40178D1Rat2861591176804291176804446Ratregion
38812D1Rat2432441168278025168278264Ratregion
38842D1Rat1572131185049847185050062Ratregion
39006D1Rat1932111178810256178810465Ratregion
39152D1Rat1472111190409744190409955Ratregion
39350D1Rat1352331172927548172927781Ratregion
39462D1Rat2892051191277928191278129Ratregion
42066D1Arb201381183618910183619055Ratregion
42075D1Arb291401176130541176130684Ratregion
42861D8Rat1831341167567130167567256Ratregion
41164D1Rat2792171167936424167936647Ratregion
42518D1Rat3642231185538160185538396Ratregion
42519D1Rat3652421188869238188869404Ratregion
42520D1Rat4402051191105768191105985Ratregion
42504D1Rat4312031168009655168009850Ratregion
42507D1Rat4332131169106670169106869Ratregion
42509D1Rat4351251173438664173438795Ratregion
42511D1Rat4341461171848065171848188Ratregion
42514D1Rat3632191174413943174414160Ratregion
42515D1Rat3621071174064367174064464Ratregion
40836D1Rat2832071173109291173109508Ratregion
40988D1Rat2852381173722820173723069Ratregion
41012D1Rat2872111185356336185356530Ratregion
41096D1Rat2841451171584911171585036Ratregion
41532D1Rat2801451166796656166796779Ratregion
41654D1Rat3592451172804146172804370Ratregion
41836D1Rat4692171171479547171479778Ratregion
43331D1Got1602041166844742166844946Ratregion
43332D1Got1591221166554583166554702Ratregion
43334D1Got1621101169131373169131483Ratregion
43338D1Got2791711173571375173571545Ratregion
43339D8Got952431178222049178222290Ratregion
43349D1Got1682311183757081183757312Ratregion
43350D1Got1662211182657961182658182Ratregion
43352D1Got1641251182336346182336470Ratregion
43353D1Got1672181182444287182444505Ratregion
43354D1Got1691671183819623183819785Ratregion
43355D1Got1731811185151421185151602Ratregion
43356D1Got1701801187264526187264706Ratregion
43357D1Got1741651186289342186289505Ratregion
43358D1Got1721451186868901186869046Ratregion
43359D1Got1791581190935481190935636Ratregion
43360D1Got1711461186617022186617166Ratregion
43363D1Got1772521186289266186289503Ratregion
43364D1Got1761381190563262190563399Ratregion
43397D1Got1911201171527794171527914Ratregion
60597D8Got1331551179722686179722841Ratregion
60239D1Got2751981179781198179781396Ratregion
60241D1Got2802081175252372175252580Ratregion
625784D1Got1631251182743688182743813Ratregion
62426D1Uia102351178114622178114840Ratregion
62428D1Uia112061170409393170409595Ratregion
66411D1Mco72781171254999171255279Ratregion
66418D1Mco92101180611319180611533Ratregion
66557D1Mco131921174149124174149306Ratregion
66559D1Mco142671174144236174144507Ratregion
66564D1Mco162221181402086181402308Ratregion
66607D1Mco321381167512331167512469Ratregion
66608D1Mco331961173500687173500889Ratregion
67299D1Arb302111167512365167512576Ratregion
67767D1Uwm61721181342124181342294Ratregion
67771D1Uwm71061186724110186724220Ratregion
1631060D1Got3821931177745340177745533Ratregion
1631665D1Got3361581186931966186932124Ratregion
1632153D1Got3852081176088362176088566Ratregion
1632242D1Got3641621172804853172805015Ratregion
1627278D1Mco292321181829743181829979Ratregion
1628147D1Got3322411175848705175848946Ratregion
1628458D1Got3872961174342927174343223Ratregion
1628485D1Got3261251172711207172711332Ratregion
1628511D1Got3811741176413248176413417Ratregion
1629174D1Got3341881180813817180814005Ratregion
1629179D1Wox741721190292132190292304Ratregion
1629242D1Got3621281173883800173883928Ratregion
1629854D1M7Mit2061011180105590180105691Ratregion
1630050D1Got3302231172065738172065961Ratregion
1639225D1Got3371141188849265188849381Ratregion
1639381D1Got328971172824397172824494Ratregion
1639624D1Wox491791174149124174149303Ratregion
1640844D1Got4312001173880600173880800Ratregion
1641202D1Got3352071184255632184255839Ratregion
1641235D1Wox602071168768601168768808Ratregion
1641409D1Got4421411179936900179937039Ratregion
1632925D1Got393921180184027180184119Ratregion
1633519D1Wox502031174144297174144500Ratregion
1639847D1Wox411191181406863181406982Ratregion
1639993D1Got3251821173375905173376087Ratregion
1640136D1Got4291731180971147180971324Ratregion
1640419D1Wox752271168791280168791507Ratregion
1634870D1Got3752011186975825186976026Ratregion
1635213D1Got3191731176555330176555493Ratregion
1635367D1Got3572991175854118175854417Ratregion
1636248D1Got3332501183962783183963033Ratregion
1636309D1Got3981211176714884176715005Ratregion
1636930D1Got4221361174571589174571725Ratregion
1637280D1Got4032161179523501179523719Ratregion
1638033D1Got3991591176968788176968947Ratregion
1638120D1Got3271351172776347172776482Ratregion
1632492D1Got4092501179939914179940164Ratregion
1633971D1Got3242841168413465168413749Ratregion
7193073AA8592021911168404589168405529Ratregion
7193070AW527407961185461023185461119Ratregion
7206282Ptpre1011190449790190449891Ratregion
5035837PMC21657P13671181461236181461603Ratregion
5036019PMC86286P19721181632120181633092Ratregion
5038822RH1273521941166704663166704857Ratregion
5036093Bckdk01182518763182519692Ratregion
5036241RH1257082161176637386176637602Ratregion
5036243D7Wsu87e2511187779055187779306Ratregion
5039242RH1275942131181076537181077179Ratregion
5036464Prkm3-rs11691181372667181372836Ratregion
5036506UniSTS:1444911701169729239169729409Ratregion
5039024RH1274691971187348354187348551Ratregion
5039078RH1275002101189983221189983431Ratregion
5039096RH1275101841181272105181272289Ratregion
5036743AU0490632141175478560175478774Ratregion
5036871AU0494712111172341499172341710Ratregion
5037083WI-206212681175287304175287572Ratregion
5037155STS-H695351551169910327169910482Ratregion
5035514EST-CFZ977461021187671389187671491Ratregion
5031236PMC109322P18221168880516168881338Ratregion
5031270PMC123054P15961180992719180993315Ratregion
5031336PMC140962P12141168234719168234933Ratregion
5026000RH1305241811181586742181586923Ratregion
5026012RH1305711511180719599180719750Ratregion
5028653RH1258312201170364521170364741Ratregion
7206210Hs3st213141176076046176077360Ratregion
7206218Hs3st21701176076439176076609Ratregion
7206220Hs3st42451178944530178944775Ratregion
5034111RH1414021951190508058190508253Ratregion
5026222RH1313821901181213400181214661Ratregion
5031628AU0476841321172988692172988800Ratregion
5031628AU0476841321172988692172988824Ratregion
5028943RH1429132851170789778170790063Ratregion
5028969RH1430111321177534856177534988Ratregion
5028981RH1430601581177665536177665694Ratregion
5034345D16S31353071180779958180780265Ratregion
5026444RH1322362011190348670190348871Ratregion
5026506RH1324742081181813994181814208Ratregion
5026592RH1328021861173876960173877146Ratregion
5029105RH1435442571178006348178006605Ratregion
5029167RH1437681131187095324187095437Ratregion
5029351RH1444661401167489141167489281Ratregion
5032127RH944701791168878272168878451Ratregion
5034756AI0102482101184963661184963871Ratregion
5034794AA8933661921167786229167786421Ratregion
5026790RH1335381831185342409185342592Ratregion
5026886RH1339062071181975550181975757Ratregion
5032283AI4627461271181026471181026598Ratregion
5026946RH1341421821172443252172443434Ratregion
5027058RH111061341184782109184782243Ratregion
5029683AA8592021381168404504168404642Ratregion
5032381AI4295441011186133062186133163Ratregion
5035400BM3867581651186166998186167163Ratregion
5035452BQ2090861731174241067174241240Ratregion
5035477BE1173211511167005689167005840Ratregion
5027099RH689162021172445842172446044Ratregion
5034860AA8497201431185096914185098279Ratregion
5034912AI1026671521175432817175432969Ratregion
5027341C86394821168233945168234027Ratregion
5027343C776621501177512176177512326Ratregion
5027345AI1954431141182414966182415080Ratregion
5027363AI4295751131181908348181908463Ratregion
5030009BI2795731661167009915167010081Ratregion
5030015AI0726022071187779887187780094Ratregion
5032789RH1353061971181007035181007232Ratregion
5035248AA8488251841172442201172442385Ratregion
5032959RH1371071821190453992190454174Ratregion
5032987RH1372082081186231206186231414Ratregion
5025038RH1271402091172431141172431350Ratregion
5025040AI267063821189597179189597261Ratregion
5027607C879631391181816564181816703Ratregion
5030291BE1053591981175619661175619859Ratregion
502782702.mHAa3d2.seq1551184048199184048354Ratregion
502789324.MMHAP35FRH9.seq1891174284427174284616Ratregion
5030503BI288983931167647134167647227Ratregion
5030551AW5345891591185352369185352528Ratregion
5025318RH1278562071183269697183269904Ratregion
5027979D183771991172430503172430702Ratregion
5033485RH1390051671170365200170365368Ratregion
5025478RH1284751981172430649172430852Ratregion
5030731BI3019352131187329562187329775Ratregion
5030797BE1201651921182945823182946015Ratregion
5030807BE1202621591182411694182411853Ratregion
5033631RH1395341911187352792187352983Ratregion
5025748RH1295091961182788619182788899Ratregion
5028326HSC0WD0621981167431331167431529Ratregion
5030915BE1081101621174153189174153353Ratregion
5030933BF3995201941173183899173184093Ratregion
5025852RH1299371941181629815181630009Ratregion
5028478AI4138161161181439602181439718Ratregion
5051819RH946762791182790344182790624Ratregion
5054951RH1435201411184848106184848253Ratregion
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5502539RH1252061011180694294180694395Ratregion
Position Markers

Flank 1: (D1Rat164)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21166,532,971 - 166,533,203 (+)MAPPER
Rnor_6.01177,235,071 - 177,235,302NCBI
Rnor_5.01184,213,481 - 184,213,712UniSTS
RGSC_v3.41170,218,208 - 170,218,440RGD
RGSC_v3.41170,218,209 - 170,218,440UniSTS
RGSC_v3.11170,338,143 - 170,338,374RGD
Celera1164,408,369 - 164,408,600UniSTS
RH 3.4 Map11322.4UniSTS
RH 3.4 Map11322.4RGD
RH 2.0 Map1854.3RGD
SHRSP x BN Map183.4799RGD
FHH x ACI Map180.0199RGD
Peak: (D1Rat216)
Rat AssemblyChrPosition (strand)Source
Rnor_5.01205,160,980 - 205,161,264NCBI
RGSC_v3.41185,923,336 - 185,923,619RGD
RGSC_v3.11186,073,217 - 186,073,500RGD
RH 2.0 Map1961.9RGD
SHRSP x BN Map191.4399RGD
FHH x ACI Map186.55RGD
Cytogenetic Map5q22UniSTS
Flank 2: (D1Rat289)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21191,277,928 - 191,278,129 (+)MAPPER
Rnor_6.01208,786,762 - 208,786,962NCBI
Rnor_5.01215,716,921 - 215,717,121UniSTS
Celera1188,986,629 - 188,986,829UniSTS
SHRSP x BN Map199.2499RGD
SHRSP x BN Map199.2499UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10059597Bp377Blood pressure QTL 3773.420.025arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)132737458199368955Rat
634314Niddm44Non-insulin dependent diabetes mellitus QTL 44blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)149393289199050459Rat
1578780Cm52Cardiac mass QTL 523.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)181591954219808434Rat
724521Uae1Urinary albumin excretion QTL 13.80.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)190508614173018436Rat
1358902Bw47Body weight QTL 471.67body mass (VT:0001259)body weight (CMO:0000012)190508614180359386Rat
1331793Bp200Blood pressure QTL 2003.71601arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)194494440172949803Rat
1331751Bp199Blood pressure QTL 1993.60022arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)194494440181830018Rat
1331749Hrtrt11Heart rate QTL 112.973heart pumping trait (VT:2000009)heart rate (CMO:0000002)194494440198211706Rat
70209Niddm23Non-insulin dependent diabetes mellitus QTL 232.82blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)194494440198324465Rat
731168Bp154Blood pressure QTL 1543.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)194642644214537671Rat
8655649Arrd1Age-related retinal degeneration QTL 14.89retinal layer morphology trait (VT:0003727)percentage of study population developing retinopathy during a period of time (CMO:0002453)1100357752183970443Rat
1354591Cm36Cardiac mass QTL 364.1heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1102813953201278233Rat
1354615Cm32Cardiac mass QTL 325.2heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)1102813953201278233Rat
1354606Bp246Blood pressure QTL 2463.6arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)1102813953218753816Rat
1300158Bp173Blood pressure QTL 1733.48arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)1115540693185145286Rat
7794788Mcs32Mammary carcinoma susceptibility QTL 322.61mammary gland integrity trait (VT:0010552)mammary tumor incidence/prevalence measurement (CMO:0000946)1115540693238914717Rat
631199Cm23Cardiac mass QTL 234.60.0004heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)1115585465172949803Rat
7421630Bp362Blood pressure QTL 3620.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1118608292241799120Rat
631205Bp196Blood pressure QTL 19640.0001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1118944897199050459Rat
61442Strs1Sensitivity to stroke QTL 17.4cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)1121767634166767634Rat
2293140Bp313Blood pressure QTL 313arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1121833674166833674Rat
631544Bp84Blood pressure QTL 845.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1123350408181759564Rat
1358189Cstrr1Cold stress response QTL 10.0001catecholamine amount (VT:0010543)urine norepinephrine level (CMO:0001629)1123350408182418476Rat
1641895Bp298Blood pressure QTL 298arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1123350408182418476Rat
1578770Stresp23Stress response QTL 23kidney sympathetic nerve activity (VT:0004050)stimulated renal sympathetic nerve activity to basal renal sympathetic nerve activity ratio (CMO:0001786)1123350408182418476Rat
631549Bp89Blood pressure QTL 895.7arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1123350581201284552Rat
634348Bp138Blood pressure QTL 138arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1125611501168883176Rat
9685799Bp375Blood pressure QTL 375arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1125611501170611501Rat
631654Bp107Blood pressure QTL 107arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1125611501170611501Rat
9685802Bp376Blood pressure QTL 376arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1126540680171540680Rat
738006Anxrr14Anxiety related response QTL 1440.00035locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1130636910175636910Rat
738028Anxrr12Anxiety related response QTL 124.90.00001locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1130636910175636910Rat
6893347Bw98Body weight QTL 980.20.53body mass (VT:0001259)body weight (CMO:0000012)1133680936178680936Rat
6893361Bw104Body weight QTL 1040.590.27body mass (VT:0001259)body weight (CMO:0000012)1133680936178680936Rat
1558645Bw55Body weight QTL 553.20.004body mass (VT:0001259)body weight (CMO:0000012)1133680936178680936Rat
71118Thym1Thymus enlargement QTL 110.170.001thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)1136829932181829932Rat
724550Thym3Thymus enlargement QTL 37.820.001thymus mass (VT:0004954)thymus weight to body weight ratio (CMO:0000612)1136829932181829932Rat
631519Pia11Pristane induced arthritis QTL 115.3joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1136830018181830018Rat
1598853Memor3Memory QTL 34.5exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)1143506580212458660Rat
61348Bp30Blood pressure QTL 302.4arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1144017057197814409Rat
70160Bw18Body weight QTL 185.7body mass (VT:0001259)body weight (CMO:0000012)1144267353196383668Rat
737828Hcas3Hepatocarcinoma susceptibility QTL 34.9liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)1144267353222987745Rat
2302378Insul11Insulin level QTL 113.25blood insulin amount (VT:0001560)serum insulin level (CMO:0000358)1144267353251128347Rat
634315Niddm45Non-insulin dependent diabetes mellitus QTL 457.16blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1144267916172949660Rat
61379Bp44Blood pressure QTL 4419.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1144267916174133260Rat
7771612Cm80Cardiac mass QTL 808.4heart left ventricle mass (VT:0007031)heart left ventricle weight (CMO:0000776)1149448574221264292Rat
724531Uae5Urinary albumin excretion QTL 54urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)1150700142252085212Rat
1578759Uae30Urinary albumin excretion QTL 303.30.003urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)1150700247252085048Rat
1578778Pur4Proteinuria QTL 43.30.003urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)1150700247252085048Rat
1354602Bw35Body weight QTL 3512.2body mass (VT:0001259)body weight (CMO:0000012)1151162512201278233Rat
1354620Kidm19Kidney mass QTL 194kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1151162512201278233Rat
1354634Kidm12Kidney mass QTL 123.9kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)1151162512201278233Rat
1354636Lmblg1Limb length QTL 16.4tibia length (VT:0004357)tibia length (CMO:0000450)1151162512201278233Rat
1354610Bw34Body weight QTL 344.1body mass (VT:0001259)body weight (CMO:0000012)1151162512256448636Rat
1354646Kidm18Kidney mass QTL 185.7kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1151162512256448636Rat
1354661Bw33Body weight QTL 335.2body mass (VT:0001259)body weight (CMO:0000012)1151162512256448636Rat
1358886Bp260Blood pressure QTL 2603.67arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1151162766225824951Rat
61343Bp28Blood pressure QTL 28arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1151646613196646613Rat
1549837Hcar15Hepatocarcinoma resistance QTL 150.05liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1153136852260522016Rat
2303622Vencon6Ventilatory control QTL 60.001respiration trait (VT:0001943)respiration rate (CMO:0000289)1154561505199561505Rat
1582204Livw1Liver weight QTL 13.60.0003liver mass (VT:0003402)liver weight to body weight ratio (CMO:0000633)1155422851172949803Rat
4889428Stresp24Stress response QTL 240.05heart pumping trait (VT:2000009)absolute change in electrocardiographic low frequency R-R spectral component to high frequency R-R spectral component ratio (CMO:0002162)1155866514200866514Rat
631548Bp88Blood pressure QTL 8850.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1156677124176484451Rat
1354618Kidm15Kidney mass QTL 155kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)1156677124201278233Rat
2312420Pur17Proteinuria QTL 177.10.0001urine protein amount (VT:0005160)urine total protein excretion rate (CMO:0000756)1156677124218753816Rat
1354580Scort1Serum corticosterone level QTL 13.4blood corticosterone amount (VT:0005345)blood corticosterone level (CMO:0001172)1156677124256448636Rat
61347Bp197Blood pressure QTL 1974.2arterial blood pressure trait (VT:2000000)blood pressure measurement (CMO:0000003)1158633083203633083Rat
2292222Bp307Blood pressure QTL 3073.060.0014arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1164310393213533942Rat
2292220Bp306Blood pressure QTL 3063.470.00087arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1164310393243914901Rat
619613Bp77Blood pressure QTL 770.01arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1164747424209747424Rat
619613Bp77Blood pressure QTL 770.01arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)1164747424209747424Rat
737974Bp161Blood pressure QTL 1610.002arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1164747558181133855Rat
2312558Glom17Glomerulus QTL 173.90.001kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)1166532971191278129Rat
1354653Despr9Despair related QTL 90.00019locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)1167909849212909849Rat
619614Bp78Blood pressure QTL 780.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1169112897197261052Rat
619614Bp78Blood pressure QTL 780.001arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)1169112897197261052Rat
61341Bp26Blood pressure QTL 26arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1169537671214537671Rat
724562Rends1Renal damage susceptibility QTL 10.05kidney glomerulus integrity trait (VT:0010546)index of glomerular damage (CMO:0001135)1169537671214537671Rat
1358294Bw37Body weight QTL 3750.000011body mass (VT:0001259)body weight (CMO:0000012)1171310381216310381Rat
2293689Bss47Bone structure and strength QTL 477.250.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra trabecular cross-sectional area (CMO:0001692)1171629477216629477Rat
2293693Bss22Bone structure and strength QTL 2233.520.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)1171629477216629477Rat
2300161Bmd43Bone mineral density QTL 438.40.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)1171629477216629477Rat
2300174Bmd42Bone mineral density QTL 428.40.0001lumbar vertebra mineral mass (VT:0010511)bone mineral density (CMO:0001226)1171629477216629477Rat
2300187Bmd41Bone mineral density QTL 418.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)1171629477216629477Rat
2293654Bss30Bone structure and strength QTL 3032.650.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)1171629477216629477Rat
2293673Bss27Bone structure and strength QTL 2718.630.0001femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)1171629477216629477Rat
2293677Bss41Bone structure and strength QTL 419.380.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra cross-sectional area (CMO:0001689)1171629477216629477Rat
1549830Bss1Bone structure and strength QTL 14.8femur strength trait (VT:0010010)femur ultimate force (CMO:0001675)1172609619217609619Rat
61326Eae6Experimental allergic encephalomyelitis QTL 65.3body mass (VT:0001259)change in body weight (CMO:0002045)1172949660181830018Rat
631214Bw61Body weight QTL613.40.0001intramuscular adipose amount (VT:0010044)intramuscular fat area (CMO:0001162)1173108781218108781Rat
631670Iddm10Insulin dependent diabetes mellitus QTL 101.9blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)1174133260196383668Rat
70163Bw20Body weight QTL 205.1body mass (VT:0001259)body weight (CMO:0000012)1174133260219133260Rat
738032Hcas5Hepatocarcinoma susceptibility QTL 53.12liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)1176426412257976495Rat
1600380Niddm70Non-insulin dependent diabetes mellitus QTL 703.10.0008blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)1176550523221550523Rat
10059600Bp378Blood pressure QTL 3783.080.05arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1176869060221869060Rat
1354624Cm35Cardiac mass QTL355.7heart left ventricle mass (VT:0007031)calculated heart weight (CMO:0000073)1177227632256448636Rat
1354652Kidm20Kidney mass QTL 204.3kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1177227632256448636Rat
1558658Bw59Body weight QTL 593.50.0003body mass (VT:0001259)body weight (CMO:0000012)1178784622223784622Rat
2325727Pia41Pristane induced arthritis QTL 41joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)1178810256180814005Rat
2325725Eae31Experimental allergic encephalomyelitis QTL 31nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)1178810256188377506Rat
634321Hc1Hypercalciuria QTL 12.91urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)1178810256240830002Rat
1578763Kidm29Kidney mass QTL 293.30.0001kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)1179567751260522016Rat
1302787Stl25Serum triglyceride level QTL 252.70.0073blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)1180359209210702199Rat
6903303Scl34Serum cholesterol QTL 342.50.0033blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)1180359209218108781Rat
737977Bp160Blood pressure QTL 1600.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1181133855226133855Rat
61378Bp43Blood pressure QTL 4322.6arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1181746937196383668Rat
724559Pancm1Pancreatic morphology QTL 17.1islet of Langerhans morphology trait (VT:0005215)pancreatic islet damage composite score (CMO:0001156)1181759564214537555Rat
2293083Iddm25Insulin dependent diabetes mellitus QTL 254.18blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1181829673224569684Rat
634312Bp143Blood pressure QTL 14330.0002arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)1182623426219932796Rat
8655655Arrd2Age-related retinal degeneration QTL 27.79retinal layer morphology trait (VT:0003727)percentage of study population developing retinopathy during a period of time (CMO:0002453)1183970203243914901Rat
8655855Arrd3Age-related retinal degeneration QTL 33.07lens clarity trait (VT:0001304)cataract incidence/prevalence measurement (CMO:0001585)1183970203243914901Rat
631838Niddm36Non-insulin dependent diabetes mellitus QTL 360.01insulin secretion trait (VT:0003564)calculated pancreatic islet insulin release measurement (CMO:0001217)1184550676229550676Rat
1300145Rf7Renal function QTL 72.96urine creatinine amount (VT:0010540)urine creatinine level (CMO:0000125)1185145134221264292Rat
1359018Hrtrt20Heart rate QTL 203.08heart pumping trait (VT:2000009)heart rate (CMO:0000002)1185356336202902618Rat
2312564Glom18Glomerulus QTL 182.40.003kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)1185356336231689108Rat
1582206Kidm33Kidney mass QTL 336.9kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)1188377360224054420Rat
6480780Insul18Insulin level QTL 184.11blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)1189607473200611765Rat
1358898Bp255Blood pressure QTL 2553.6arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)1191019702246062233Rat
10059590Kidm44Kidney mass QTL 443.420.025kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)1191033875236033875Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type backcross  
qtl_general allele: homozygosity of LEW/Maas allele caused 7.8% increase in the glomerular damage score 2312422
qtl_general inducing agent: anti-Thy-1 glomerulonephritis (antiThy1.1 ER4G) 2312422
qtl_general software used: phenotypic distribution by Kolmogorov-Smirnov test; QTL mapping by MapMaker 2312422
qtl_general number of animals used: 145 females 2312422
qtl_general measurement method: animals were injected with (2mg/kg body wt) anti-Thy1.1 ER4 antibody; average percentage of abnormal glumeruli on day 21 is expressed as glomerular damage score 2312422