Bp338 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Bp338 (Blood pressure QTL 338) Rattus norvegicus

Symbol: Bp338
Name: Blood pressure QTL 338
RGD ID: 2306899
Previously known as: Bp QTL 4
Trait: arterial blood pressure trait   (VT:2000000)    
Measurement Type: systolic blood pressure   (CMO:0000004)    
LOD Score: Not Available
P Value: 0.071
Variance: Not Available
Inheritance Type: codominant
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2481,006,124 - 120,102,625RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0481,874,073 - 119,546,974RGD_MAPPER_PIPELINERnor6.0
Rnor_5.04146,540,904 - 184,799,673RGDRnor5.0
RGSC_v3.4480,205,349 - 121,829,076RGDRGSC3.4
Cross Type: intercross
Strains Crossed: SHR.BN-(D4Rat33-D4Rat54)/Jk 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
# Reference Title Reference Citation
1. Congenic strains provide evidence that four mapped loci in chromosomes 2, 4, and 16 influence hypertension in the SHR. Aneas I, etal., Physiol Genomics. 2009 Mar 3;37(1):52-7. Epub 2009 Jan 6.
Related QTLs

Related QTL Description Reference
Bp21 maps to same region RGD:2306880


Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
620159Skap2src kinase associated phosphoprotein 248094883281100900Rat
7570592LOC102550087uncharacterized LOC10255008748110093781144318Rat
11420575LOC10835086060S ribosomal protein L31 pseudogene48119187681192258Rat
41099928LOC120102275uncharacterized LOC12010227548119303681208800Rat
11414885Hoxa1homeobox A148125581481258587Rat
7716070Hotairm1Hoxa transcript antisense RNA, myeloid-specific 148125879381262291Rat
11468112Hoxa2homeobox A248126266881266970Rat
1561431Hoxa3homeobox A348126924381313218Rat
7620814Hoxa3l1homeobox A3 like 148127531381293064Rat
40941309LOC120102276uncharacterized LOC12010227648128008781281256Rat
2814Hoxa4homeo box A448128967781291685Rat
10398773Hoxaas3Hoxa cluster antisense RNA 348130125481313958Rat
620609Hoxa5homeo box A548130234181306234Rat
1590236Hoxa6homeobox A648130491881313184Rat
1587253Hoxa7homeobox A748131573081317629Rat
1310001Hoxa9homeobox A948132323581329344Rat
2314882Mir196bmicroRNA 196b48133048781330571Rat
9410935Hoxa10homeobox A1048133159181340878Rat
1564605Hoxa11homeobox A1148134252781346189Rat
1564419Hoxa11-asHOXA11 antisense RNA48134641681350190Rat
1562483Hoxa13homeo box A1348135895681361091Rat
11434685Evx1even-skipped homeobox 148141659081420967Rat
41113909Ndufb4-ps7NADH:ubiquinone oxidoreductase subunit B4, pseudogene 748147423881474752Rat
40974159LOC120102277uncharacterized LOC12010227748157824081580768Rat
41226461LOC120102278uncharacterized LOC12010227848161340681619082Rat
708399Hibadh3-hydroxyisobutyrate dehydrogenase48164918081747244Rat
41150076LOC120102279uncharacterized LOC12010227948170440281727173Rat
708579Tax1bp1Tax1 binding protein 148182199181877906Rat
1589007Jazf1JAZF zinc finger 148187950182183237Rat
7551122Srsf7-ps5serine and arginine rich splicing factor 7, pseudogene 548214009382142214Rat
11492396LOC108350711uncharacterized LOC10835071148215375582165281Rat
40973112LOC120102280uncharacterized LOC12010228048225601382264460Rat
41294070Ckmt1-ps1creatine kinase, mitochondrial 1, pseudogene 148228467082319694Rat
41301986LOC120102651small nucleolar RNA SNORA4848229639982296539Rat
41028316LOC120102281uncharacterized LOC12010228148232552182347057Rat
1566107Creb5cAMP responsive element binding protein 548239309182794320Rat
1310827TrilTLR4 interactor with leucine-rich repeats48292232782927172Rat
41074832LOC120102667small nucleolar RNA SNORA1748298003982980170Rat
1563609Cpvlcarboxypeptidase, vitellogenic-like48298142183091730Rat
620140Chn2chimerin 248314861683407711Rat
41059633LOC120102282uncharacterized LOC12010228248317836983186721Rat
7593775LOC102553678uncharacterized LOC10255367848336464383376599Rat
1311589Prr15proline rich 1548343200283435582Rat
41347976Eef1b2-ps1eukaryotic translation elongation factor 1 beta 2, pseudogene 148344887783449544Rat
708559Wipf3WAS/WASL interacting protein family, member 348355007583629929Rat
1560999Scrn1secernin 148363212583694225Rat
7685582LOC102553885uncharacterized LOC10255388548369316083711573Rat
1311705Fkbp14FKBP prolyl isomerase 1448370553183721515Rat
1563940Plekha8pleckstrin homology domain containing A848372347083774081Rat
7537419Tomm7-ps3translocase of outer mitochondrial membrane 7, pseudogene 348373880383743666Rat
1549700Mturnmaturin, neural progenitor differentiation regulator homolog48380752883828494Rat
6500991LOC100909941uncharacterized LOC10090994148387056083875187Rat
1306645Znrf2zinc and ring finger 248395040684032676Rat
1562269Nod1nucleotide-binding oligomerization domain containing 148406087184111668Rat
41396160LOC120102675small nucleolar RNA SNORA1748411420284114328Rat
1304876Ggctgamma-glutamyl cyclotransferase48412292184129327Rat
2325113LOC10035961360S ribosomal protein L12-like48414816584152462Rat
1307856Gars1glycyl-tRNA synthetase 148417159684212609Rat
70547Crhr2corticotropin releasing hormone receptor 248422289784265924Rat
7724284LOC102550746uncharacterized LOC10255074648428875284310594Rat
1597087Inmtindolethylamine N-methyltransferase48431819784322493Rat
1562590Mindy4MINDY lysine 48 deubiquitinase 448435866084469189Rat
2141Aqp1aquaporin 148448251284494690Rat
2688Ghrhrgrowth hormone releasing hormone receptor48449815984532851Rat
7509699LOC102551107uncharacterized LOC10255110748454311884560009Rat
2038Adcyap1r1ADCYAP receptor type I48459355884642700Rat
1562793Neurod6neuronal differentiation 648484665984849905Rat
1561131Itprid1ITPR interacting domain containing 148501526485172457Rat
628647Ppp1r17protein phosphatase 1, regulatory subunit 1748521359585230607Rat
68332Pde1cphosphodiesterase 1C48530085885777948Rat
40966591Apoo-ps4apolipoprotein O, pseudogene 448531798985318559Rat
41079727Trnas-aga44transfer RNA serine (anticodon AGA) 4448548230785482381Rat
41168976Trnat-agu9transfer RNA threonine (anticodon AGU) 948552640985526483Rat
41243681LOC120102661small nucleolar RNA SNORA1748579175085791883Rat
41177763LOC120102688small nucleolar RNA SNORA1748581335885813483Rat
1565107Rpsa-ps19ribosomal protein SA, pseudogene 1948586753285868460Rat
1308655Lsm5LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated48595107385954289Rat
1564615Avl9AVL9 cell migration associated48596149386008347Rat
1310317Kbtbd2kelch repeat and BTB domain containing 248602794786050266Rat
1549757Fkbp9FKBP prolyl isomerase 948610625686156723Rat
1312013Nt5c3a5'-nucleotidase, cytosolic IIIA48616164286204656Rat
1585226Hnrnpa1-ps32heterogeneous nuclear ribonucleoprotein A1, pseudogene 3248621647386218622Rat
1585214Vom1r65vomeronasal 1 receptor 6548623591286245705Rat
11356528LOC108350861glyceraldehyde-3-phosphate dehydrogenase pseudogene48625213086253132Rat
1549708Vom1r67vomeronasal 1 receptor 6748626771986268663Rat
1549744Vom1r66vomeronasal 1 receptor 6648628841586289326Rat
2316407Vom1r-ps69vomeronasal 1 receptor pseudogene 6948632957886330574Rat
1584130Vom1r-ps70vomeronasal 1 receptor pseudogene 7048634301886343928Rat
1549721Vom1r68vomeronasal 1 receptor 6848638056786381478Rat
1549722Vom1r69vomeronasal 1 receptor 6948639457186395479Rat
2323070Selenot-ps1selenoprotein T, pseudogene 148639863886399185Rat
1549710Vom1r70vomeronasal 1 receptor 7048644781886448717Rat
1549777Vom1r71vomeronasal 1 receptor 7148653684786537749Rat
1549709Vom1r72vomeronasal 1 receptor 7248662671886627617Rat
41345109Hsp90aa1-ps7heat shock protein 90 alpha family class A member 1, pseudogene 748663089386631975Rat
1549715Vom1r73vomeronasal 1 receptor 7348668476586685682Rat
1582950Vom1r-ps71vomeronasal 1 receptor pseudogene 7148671349186714388Rat
6487873Tubg1-ps2tubulin, gamma 1, pseudogene 248671611286717437Rat
1549695Vom1r74vomeronasal 1 receptor 7448674378186744692Rat
11405111Vom1r75vomeronasal 1 receptor 7548675662486757556Rat
1549714Vom1r76vomeronasal 1 receptor 7648678181586782714Rat
1597453Hsp90aa1-ps1heat shock protein 90 alpha family class A member 1, pseudogene 148679106886796467Rat
1359218Vom1r77vomeronasal 1 receptor 7748680140086802317Rat
9351699LOC10369489440S ribosomal protein S6 pseudogene48681994286820686Rat
9290612LOC10369214440S ribosomal protein S6 pseudogene48684360986845120Rat
1549704Vom1r78vomeronasal 1 receptor 7848687204986872966Rat
1359257Vom1r79vomeronasal 1 receptor 7948691076686912251Rat
1549747Vom1r80vomeronasal 1 receptor 8048695493486955833Rat
1587250Tubg1-ps4tubulin, gamma 1, pseudogene 448695738286958820Rat
1549765Vom1r81vomeronasal 1 receptor 8148697716786978099Rat
1596167Vom1r-ps72vomeronasal 1 receptor pseudogene 7248701153087012437Rat
1549746Vom1r82vomeronasal 1 receptor 8248704874187049637Rat
1560845Vom1r-ps73vomeronasal 1 receptor pseudogene 7348706579587066329Rat
1549731Vom1r83vomeronasal 1 receptor 8348711393687114844Rat
1549753Vom1r84vomeronasal 1 receptor 8448713607487136982Rat
1549732Vom1r85vomeronasal 1 receptor 8548716095987161867Rat
1549696Vom1r86vomeronasal 1 receptor 8648719852587199433Rat
1587190Vom1r-ps74vomeronasal 1 receptor pseudogene 7448723150487232398Rat
1549756Vom1r87vomeronasal 1 receptor 8748725552587256433Rat
1596849Vom1r-ps111vomeronasal 1 receptor pseudogene 11148730700087307908Rat
1549699Vom1r88vomeronasal 1 receptor 8848734693387347826Rat
1306494Vopp1VOPP1 WW domain binding protein48736367887432747Rat
1310809Lancl2LanC like glutathione S-transferase 248744182187483707Rat
1565524PyurfPIGY upstream open reading frame48750185987505494Rat
1561739Herc6HECT and RLD domain containing E3 ubiquitin protein ligase family member 648752447087566895Rat
1563162Rps7-ps20ribosomal protein S7, pseudogene 2048759277387602036Rat
1308501Ppm1kprotein phosphatase, Mg2+/Mn2+ dependent, 1K48761219887638993Rat
631345Abcg2ATP binding cassette subfamily G member 248767624187802757Rat
41258840LOC120102567U6 spliceosomal RNA48784604487846150Rat
1587249Ppid-ps16peptidylprolyl isomerase D, pseudogene 1648785508187856880Rat
41250383LOC120102287uncharacterized LOC12010228748794191487952110Rat
1307803Herc3HECT and RLD domain containing E3 ubiquitin protein ligase 348795220288042492Rat
1584123Nap1l5nucleosome assembly protein 1-like 548802267088024988Rat
1309807Fam13afamily with sequence similarity 13, member A48805652188155782Rat
41392412LOC120102697small nucleolar RNA SNORA1748824063988240769Rat
1593482Acbd5-ps1acyl-CoA binding domain containing 5, pseudogene 148826755188268264Rat
1559612Tigd2tigger transposable element derived 248841436688417458Rat
2322105Senp6-ps1SUMO specific peptidase 6, pseudogene 148855134588555553Rat
1565690Gprin3GPRIN family member 348857206288657369Rat
11451272LOC108350862uncharacterized LOC10835086248876271388780061Rat
41381715LOC120102288uncharacterized LOC12010228848944218589475598Rat
3729Sncasynuclein alpha48969642089797240Rat
1591097Eno1-ps7enolase 1, pseudogene 748987254889873844Rat
1587248Mmrn1multimerin 148987540889950814Rat
2321912Ppp6c-ps1protein phosphatase 6, catalytic subunit, pseuidogene 148997047089997261Rat
41044388LOC120102751U2 spliceosomal RNA49015113790151328Rat
1565731Ccser1coiled-coil serine-rich protein 149015387391391441Rat
41195085LOC120102492uncharacterized LOC12010249249081616490869483Rat
11440908LOC108350839high mobility group protein B1-like49130690291309095Rat
40994091Paics-ps3phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase, pseudogene 349164710291648078Rat
41059287LOC120102620U7 small nuclear RNA49171696791717031Rat
620960Hint1-ps1histidine triad nucleotide binding protein 1, pseudogene 149210099492101568Rat
9264819Tshr-ps1thyroid stimulating hormone receptor, pseudogene 149214265692143138Rat
68368Grid2glutamate ionotropic receptor delta type subunit 249241501993892472Rat
41193354LOC120102493uncharacterized LOC12010249349329282193299590Rat
40926323LOC120102600U6 spliceosomal RNA49362423893624344Rat
41104383LOC120102494uncharacterized LOC12010249449389284393911169Rat
1565171Atoh1atonal bHLH transcription factor 149391206893914163Rat
41221465LOC120102615U7 small nuclear RNA49406097694061038Rat
40929032LOC120102616U7 small nuclear RNA49406112494061185Rat
1588783Ptma-ps1prothymosin alpha, pseudogene 149406540194065784Rat
41255876LOC120102647small nucleolar RNA SNORA4849414489094145033Rat
1587189Nono-ps10non-POU domain containing, octamer-binding, pseudogene 1049415739794158751Rat
1309640Smarcad1SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1`49431144194379184Rat
69251Hpgdshematopoietic prostaglandin D synthase49436842694397931Rat
9386529Ywhaq-ps4tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta, pseudogene 449449111694491862Rat
1560028Qrfprlpyroglutamylated RFamide peptide receptor like49467837094757034Rat
1588732Tnip3TNFAIP3 interacting protein 349486725894908780Rat
1311080Ndnfneuron-derived neurotrophic factor49494439294981871Rat
40991721LOC120102726small nucleolar RNA SNORA1749499311894993219Rat
41386173Trnal-aag20transfer RNA leucine (anticodon AAG) 2049503448895034569Rat
1588700Prdm5PR/SET domain 549507573695237921Rat
735071RSA-14-44RSA-14-44 protein49525165795253029Rat
41323200LOC120102581U6 spliceosomal RNA49528482095284926Rat
1307592Lin28clin-28 homolog C (C. elegans)49541756695420497Rat
1587188Eif4g1-ps3eukaryotic translation initiation factor 4 gamma 1, pseudogene 349559026595592593Rat
1587548Havcr1-ps1hepatitis A virus cellular receptor 1, pseudogene 149563296895633283Rat
1564699Hmgb1-ps19high-mobility group box 1, pseudogene 1949574279595743265Rat
41328136LOC120102650small nucleolar RNA SNORA4849582653795826676Rat
1310889Mad2l1mitotic arrest deficient 2 like 149590669295918885Rat
1359215Vom1r89vomeronasal 1 receptor 8949594262695943550Rat
621516Gng12G protein subunit gamma 1249601111896134767Rat
2654Gadd45agrowth arrest and DNA-damage-inducible, alpha49615478996157091Rat
6488311LOC100912188uncharacterized LOC10091218849615649096204457Rat
619907Serbp1Serpine1 mRNA binding protein 149640158796421816Rat
41196388LOC120102291uncharacterized LOC12010229149641626996417217Rat
620026Il12rb2interleukin 12 receptor subunit beta 249642639696515251Rat
1586368Il23rinterleukin 23 receptor49658056896672540Rat
1359498Tacstd2tumor-associated calcium signal transducer 249670795096709650Rat
41113583LOC120102728small nucleolar RNA SNORA1749681038496810504Rat
41316092LOC120102682small nucleolar RNA SNORA1749685191196852043Rat
41337280LOC120102727small nucleolar RNA SNORA1749688594096886060Rat
11362919Igkvl-ps13immunoglobulin kappa variable like, pseudogene 1349696857496969477Rat
41059548LOC120102691small nucleolar RNA SNORA1749698993796990067Rat
41107960LOC120102702small nucleolar RNA SNORA1749700031297000443Rat
41251011LOC120102700small nucleolar RNA SNORA1749709688597097017Rat
9438141Igkvl8immunoglobulin kappa variable like 849711573297119085Rat
41170451LOC120102696small nucleolar RNA SNORA1749713082197130958Rat
41215295LOC120102732small nucleolar RNA SNORA1749715488097155000Rat
41112623LOC120102736small nucleolar RNA SNORA1749717502897175121Rat
40942068LOC120102704small nucleolar RNA SNORA1749722965597229787Rat
9102747Igkvl-ps16immunoglobulin kappa variable like, pseudogene 1649734899497349801Rat
40977765LOC120102731small nucleolar RNA SNORA1749748051797480618Rat
11364654Igkvl-ps17immunoglobulin kappa variable like, pseudogene 1749749492997495415Rat
9439280Igkvl9immunoglobulin kappa variable like 949757291097573408Rat
40936449LOC120102716small nucleolar RNA SNORA1749757666097576791Rat
2322825Igkv2-112l1immunoglobulin kappa variable 2-112 like 149780939697810460Rat
9330732Ndufb3l1NADH:ubiquinone oxidoreductase subunit B3 like 149782873997829070Rat
11052016Igkvl10immunoglobulin kappa variable like 1049791651997917533Rat
41045910LOC120102715small nucleolar RNA SNORA1749796989597970021Rat
6495277Igkvl12immunoglobulin kappa variable like 1249800125798002145Rat
41327009LOC120102729small nucleolar RNA SNORA1749800423498004360Rat
1561722Igkvl2immunoglobulin kappa variable like 249813078798131675Rat
41094682LOC120102721small nucleolar RNA SNORA1749813375998133886Rat
41353377LOC120102733small nucleolar RNA SNORA1749823881598238917Rat
41169229LOC120102722small nucleolar RNA SNORA1749826317398263300Rat
41125163LOC120102717small nucleolar RNA SNORA1749849391198494037Rat
41253364LOC120102725small nucleolar RNA SNORA1749858397298584104Rat
11051993Igkvl-ps11immunoglobulin kappa variable like, pseudogene 1149858862498589555Rat
41263518Igkvl-ps5immunoglobulin kappa variable like, pseudogene 549887513898875778Rat
41365694Igkvl-ps7immunoglobulin kappa variable like, pseudogene 749896141998965084Rat
41075263Igkvl-ps6immunoglobulin kappa variable like, pseudogene 649901452399015161Rat
41277236LOC120102585U6 spliceosomal RNA49914578099145884Rat
41180823LOC120102592U6 spliceosomal RNA49916978599169889Rat
41205249Rnu6-936RNA, U6 small nuclear 93649920039799200501Rat
41120707LOC120102598U6 spliceosomal RNA49921932699219429Rat
40974521LOC120102579U6 spliceosomal RNA49925367099253774Rat
41114178LOC120102583U6 spliceosomal RNA49926872299268826Rat
41107864LOC120102589U6 spliceosomal RNA49929007299290176Rat
41033320LOC120102595U6 spliceosomal RNA49930944099309544Rat
41049106Igkvl-ps15immunoglobulin kappa variable like, pseudogene 1549932280799323306Rat
40946187Igkvl-ps3immunoglobulin kappa variable like, pseudogene 349934046699340968Rat
40961802LOC120102590U6 spliceosomal RNA49934623299346336Rat
41270403Igkvl-ps4immunoglobulin kappa variable like, pseudogene 449936335399363814Rat
2320855Mak16-ps1MAK16 homolog, pseudogene 149936447499369594Rat
2323358Igkvl3immunoglobulin kappa variable like 349938974799390292Rat
40952956Arpc5l-ps4actin related protein 2/3 complex, subunit 5-like, pseudogene 449942323999424376Rat
41362761Igkvl-ps8immunoglobulin kappa variable like, pseudogene 849953181099532249Rat
11051991Igkvl-ps10immunoglobulin kappa variable like, pseudogene 1049976417199765272Rat
2321092Igkvl1immunoglobulin kappa variable like 149994200399942688Rat
2320327Igkvl-ps21immunoglobulin kappa variable like, pseudogene 214100209006100209643Rat
7521956Znf431l-ps5zinc finger protein 431 like, pseudogene 54100210123100220831Rat
2319569Igkvl14immunoglobulin kappa variable like 144100487837100488968Rat
1561547Igkvl16immunoglobulin kappa variable like 164100511688100512362Rat
11383082Igkvl-ps19immunoglobulin kappa variable like, pseudogene 194100736032100736741Rat
41136119LOC120102301uncharacterized LOC1201023014100744447100787990Rat
11458713Igkvl-ps2immunoglobulin kappa variable like, pseudogene 24100774851100775585Rat
11051990Igkvl-ps1immunoglobulin kappa variable like, pseudogene 14100900754100901355Rat
11051998Igkvl-ps18immunoglobulin kappa variable like, pseudogene 184101003409101004411Rat
2324539Igkcl1immunoglobulin kappa constant like 14101065901101066416Rat
1587247Fbl-ps5fibrillarin, pseudogene 54101138821101139593Rat
11051987Igkvl-ps20immunoglobulin kappa variable like, pseudogene 204101195589101196676Rat
1588449C17h6orf62-ps1similar to human chromosome 6 open reading frame 62, pseudogene 14101258582101259187Rat
41305950LOC120102564U6 spliceosomal RNA4101286236101286342Rat
620468Igkv28immunoglobulin kappa chain variable 284101302903101303452Rat
1592227Eif5-ps10eukaryotic translation initiation factor 5, pseudogene 104101363702101365081Rat
41091703Fbl-ps4fibrillarin, pseudogene 44101416548101417555Rat
2318882Igkvl13immunoglobulin kappa variable like 134101432815101433399Rat
41381944LOC120102305uncharacterized LOC1201023054101437202101439905Rat
2319042Igkv5-45l1immunoglobulin kappa chain variable 5-45 like 14101478715101479376Rat
1586004Fbl-ps6fibrillarin, pseudogene 64101510664101511950Rat
11497379Igkvl4immunoglobulin kappa variable like 44101645320101645700Rat
9252629Igkvl-ps12immunoglobulin kappa variable like, pseudogene 124101726300101727506Rat
1586003Igkvl5immunoglobulin kappa variable like 54101805860101806662Rat
11052049Igkv8-30l1immunoglobulin kappa chain variable 8-30 like 14101838285101839132Rat
1563231Igkv2-112l2immunoglobulin kappa variable 2-112 like 24102208069102208647Rat
1564696Igkvl6immunoglobulin kappa variable like 64102304440102305139Rat
2321310Igkvl11immunoglobulin kappa variable like 114102343796102344458Rat
1597311Gtdc1-ps1glycosyltransferase-like domain containing 1, pseudogene 14102443892102445203Rat
2320908Igkvl7immunoglobulin kappa variable like 74102446979102447648Rat
41008980LOC120102656small nucleolar RNA SNORA484102572182102572325Rat
7706369Hdac2-ps1histone deacetylase 2, pseudogene 14102624284102625962Rat
41213638LOC120102652small nucleolar RNA SNORA484102675250102675393Rat
1311377Rpiaribose 5-phosphate isomerase A4102723712102749374Rat
41120297LOC120102574U6 spliceosomal RNA4102735624102735728Rat
7583063LOC102549525uncharacterized LOC1025495254102802796102805439Rat
70884Eif2ak3eukaryotic translation initiation factor 2 alpha kinase 34102805495102866914Rat
1562720Spmip9sperm microtubule inner protein 94102885695102892934Rat
1561816Foxi3forkhead box I34102933487102937655Rat
41364677LOC120102648small nucleolar RNA SNORA484102978143102978286Rat
41236250LOC120102679U1 spliceosomal RNA4103011258103011413Rat
1309144Thnsl2threonine synthase-like 24103112974103132122Rat
2590Fabp1fatty acid binding protein 14103191015103194791Rat
1305105Smyd1SET and MYND domain containing 14103195330103252989Rat
7727476LOC102549052low molecular weight phosphotyrosine protein phosphatase-like4103247606103251384Rat
40934091Trnaa-agctransfer RNA alanine (anticodon AGC)4103258388103258469Rat
1306495Krcc1lysine-rich coiled-coil 14103261642103274672Rat
7647571Zmat1l1zinc finger, matrin-type 1 like 14103292937103297980Rat
2317Cd8bCD8 subunit beta4103312596103328523Rat
1587245Tuba1b-ps8tubulin, alpha 1B, pseudogene 84103340394103341605Rat
2316Cd8aCD8 subunit alpha4103365804103370041Rat
1309766Rmnd5arequired for meiotic nuclear division 5 homolog A4103375846103432890Rat
40952747Trnas-aga32transfer RNA serine (anticodon AGA) 324103396425103396498Rat
620586Rnf103ring finger protein 1034103526456103542529Rat
708556Chmp3charged multivesicular body protein 34103576453103622566Rat
708351Kdm3alysine demethylase 3A4103630907103675073Rat
1305230Reep1receptor accessory protein 14103746004103862347Rat
1307065Mrpl35mitochondrial ribosomal protein L354103865812103876687Rat
1310684Immtinner membrane mitochondrial protein4103880482103919116Rat
1565582Ptcd3Pentatricopeptide repeat domain 34103922440103957445Rat
41156854Snord94small nucleolar RNA, C/D box 944103924328103924464Rat
620824Polr1aRNA polymerase I subunit A4103950051104014022Rat
2319759Tmem94-ps1transmembrane protein 94, pseudogene 14104043649104046004Rat
41152181LOC120102169uncharacterized LOC1201021694104098343104105838Rat
7553872LOC102556495uncharacterized LOC1025564954104131807104134481Rat
620875St3gal5ST3 beta-galactoside alpha-2,3-sialyltransferase 54104134613104192558Rat
41176189LOC120102561U6 spliceosomal RNA4104156903104157009Rat
7524413LOC102546367uncharacterized LOC1025463674104166361104168839Rat
1561512Atoh8atonal bHLH transcription factor 84104259992104292168Rat
41062867LOC120102308uncharacterized LOC1201023084104292221104321842Rat
621700Sftpbsurfactant protein B4104359303104368439Rat
1308103Usp39ubiquitin specific peptidase 394104373948104406359Rat
1587471C4h2orf68similar to human chromosome 2 open reading frame 684104402553104408317Rat
619998Tmem150atransmembrane protein 150A4104410271104414630Rat
1359698Rnf181ring finger protein 1814104414586104421433Rat
620419Vamp5vesicle-associated membrane protein 54104423813104435059Rat
620421Vamp8vesicle-associated membrane protein 84104442383104452884Rat
68383Ggcxgamma-glutamyl carboxylase4104469737104485631Rat
619985Mat2amethionine adenosyltransferase 2A4104489877104495447Rat
11355186LOC108350864ATP synthase subunit g, mitochondrial pseudogene4104555149104555540Rat
1587427Sh2d6SH2 domain containing 64104566210104574176Rat
1311724Capgcapping actin protein, gelsolin like4104594743104611856Rat
41109258Trnap-agg74transfer RNA proline (anticodon AGG) 744104598962104599042Rat
1306408Elmod3ELMO domain containing 34104614665104653122Rat
628802Retsatretinol saturase4104653306104662069Rat
620445Tgoln2trans-golgi network protein 24104663356104671208Rat
7699711LOC102549526uncharacterized LOC1025495264104672363104687654Rat
1311671Tcf7l1transcription factor 7 like 14104680734104846086Rat
7562795LOC102549458uncharacterized LOC1025494584104767270104769717Rat
1591490Kcmf1potassium channel modulatory factor 14104888452104950234Rat
41358316LOC120102632small nucleolar RNA SNORA36 family4104895641104895763Rat
41116383LOC120102170thymosin beta-10-like4104962822104963289Rat
41083750LOC120102310uncharacterized LOC1201023104104988896104994531Rat
62022Tmsb10thymosin, beta 104105009959105011095Rat
41323307LOC120102777U4 spliceosomal RNA4105038037105038123Rat
621797Dnah6dynein, axonemal, heavy chain 64105064123105284361Rat
7639290Phb1-ps4prohibitin 1, pseudogene 44105082392105084201Rat
41389009LOC120102554U4 spliceosomal RNA4105248170105248327Rat
41141586LOC120102311uncharacterized LOC1201023114105288960105294181Rat
619821Suclg1succinate-CoA ligase GDP/ADP-forming subunit alpha4105308236105337595Rat
1334150Or6c235-ps1olfactory receptor family 6 subfamily C member 235, pseudogene 14105479255105480121Rat
1562515JkamplJNK1/MAPK8 associated membrane protein like4105520442105521542Rat
1586033Ptbp1-ps3polypyrimidine tract binding protein 1, pseudogene 34105696627105698961Rat
11472949LOC108350866uncharacterized LOC1083508664105957318105981816Rat
1586032Shc1-ps1SHC adaptor protein 1, pseudogene 14105988811105991749Rat
41373605LOC120102663small nucleolar RNA SNORA174106494538106494669Rat
41121066Fam50a-ps1family with sequence similarity 50, member A, pseudogene 14106608389106609566Rat
11468430Trnas-gcu6transfer RNA serine (anticodon GCU) 64106831010106831091Rat
1586002Cactin-ps3cactin, spliceosome C complex subunit, pseudogene 34106867095106868859Rat
2320685Slc25a39-ps8solute carrier family 25 member 39, pseudogene 84107360735107361799Rat
1585901Hnrnpc-ps3heterogeneous nuclear ribonucleoprotein C, pseudogene 34107575688107585650Rat
41247803LOC120102720small nucleolar RNA SNORA174108118729108118852Rat
2316392Vom1r-ps76vomeronasal 1 receptor pseudogene 764108297905108298689Rat
2320349Tra2b-ps2transformer 2 beta, pseudogene 24108405683108421146Rat
40933947LOC120102313uncharacterized LOC1201023134108573617108627858Rat
11402703Rpl27a-ps5ribosomal protein L27a, pseudogene 54108745019108755613Rat
41291582Npm1-ps6nucleophosmin 1, pseudogene 64108791940108792947Rat
41103026Atp5mg-ps11ATP synthase membrane subunit g, pseudogene 114108818020108821027Rat
1584754Rpl6-ps15ribosomal protein L6, pseudogene 154108858856108967329Rat
41321497LOC120102565U6 spliceosomal RNA4109168372109168478Rat
1305060Ctnna2catenin alpha 24109294249110443409Rat
1585921LRRTM1leucine rich repeat transmembrane neuronal 14109701815109718924Rat
11385872LOC108350868glyceraldehyde-3-phosphate dehydrogenase pseudogene4110616441110617544Rat
41172269LOC120102644U11 spliceosomal RNA4110662076110662209Rat
3254Reg3bregenerating family member 3 beta4110861775110865015Rat
2319874Reg3b-ps1regenerating family member 3 beta, pseudogene 14110867647110870075Rat
621401Reg3aregenerating islet-derived 3 alpha4110872398110875157Rat
3552Reg1aregenerating family member 1 alpha4110892451110895115Rat
7688358LOC102556035uncharacterized LOC1025560354110915998110999186Rat
3256Reg3gregenerating family member 3 gamma4110922805110927803Rat
7552576Stxbp3-ps1syntaxin binding protein 3, pseudogene 14111049442111054421Rat
7708743LOC102556090uncharacterized LOC1025560904111069839111075961Rat
41016841LOC120102668U1 spliceosomal RNA4111394809111394970Rat
41323577LOC120102314uncharacterized LOC1201023144111407391111454991Rat
41096961LOC120102643small nucleolar RNA SNORA514111475412111475543Rat
41159196LOC120102709small nucleolar RNA SNORA174111773083111773205Rat
1560707Lrrtm4leucine rich repeat transmembrane neuronal 44112545874113338713Rat
1586028Ldha-ps9lactate dehydrogenase A, pseudogene 94113345717113349041Rat
1595483Rps9-ps10ribosomal protein S9, pseudogene 104113401645113402234Rat
41195793LOC120102315uncharacterized LOC1201023154113504541113533897Rat
1586001Plin3-ps2perilipin 3, pseudogene 24113755510113756823Rat
1594207Got2l1glutamatic-oxaloacetic transaminase 2, mitochondrial like 14114189936114190548Rat
40972357LOC120102677small nucleolar RNA SNORA174114390354114390483Rat
6493044LOC100911370uncharacterized LOC1009113704114459942114463108Rat
1304792Gcfc2GC-rich sequence DNA-binding factor 24114481613114519268Rat
1587381Mrpl19mitochondrial ribosomal protein L194114521824114526053Rat
1559797Eva1aeva-1 homolog A, regulator of programmed cell death4114593773114643011Rat
7520921Prdx6-ps2peroxiredoxin 6, pseudogene 24114684131114684952Rat
3811Tacr1tachykinin receptor 14114920844115089733Rat
41166952LOC120102316uncharacterized LOC1201023164115098139115106023Rat
1307793Pole4DNA polymerase epsilon 4, accessory subunit4115165285115171097Rat
7711844LOC102547728uncharacterized LOC1025477284115172801115177968Rat
41162732LOC120102317uncharacterized LOC1201023174115217376115228513Rat
2797Hk2hexokinase 24115234509115283530Rat
1592965Rps27a-ps18ribosomal protein S27a, pseudogene 184115353266115353807Rat
3658Sema4fssemaphorin 4F4115411411115437721Rat
1563842M1apmeiosis 1 associated protein4115445910115536745Rat
1596846Rps25-ps8ribosomal protein S25, pseudogene 84115473792115474236Rat
41270105LOC120102319uncharacterized LOC1201023194115515273115521277Rat
1309499Dok1docking protein 14115537453115540464Rat
1311011Loxl3lysyl oxidase-like 34115540640115556958Rat
1308906Htra2HtrA serine peptidase 24115556914115560202Rat
1591777Aup1AUP1, lipid droplet regulating VLDL assembly factor4115560274115563346Rat
1591766Dqx1DEAQ box RNA-dependent ATPase 14115563497115572598Rat
1595506Tlx2T-cell leukemia homeobox 24115573736115576097Rat
1549782Pcgf1polycomb group ring finger 14115576165115587019Rat
1561172Lbx2ladybird homeobox 24115591974115593859Rat
1561779Ccdc142coiled-coil domain containing 1424115606151115616223Rat
1306709Mrpl53mitochondrial ribosomal protein L534115615329115616219Rat
41349825Rpl23-ps8ribosomal protein L23,pseudogene 84115616374115621512Rat
69240Mogsmannosyl-oligosaccharide glucosidase4115621623115625026Rat
1304961Wbp1WW domain binding protein 14115625168115627567Rat
1562258Ino80bINO80 complex subunit B4115627907115631069Rat
11518313LOC108350719uncharacterized LOC1083507194115639631115642945Rat
727874Rtknrhotekin4115640813115657952Rat
1561494Wdr54WD repeat domain 544115654968115677979Rat
1566019C4h2orf81similar to human chromosome 2 open reading frame 814115661617115667929Rat
62038Dctn1dynactin subunit 14115671024115703824Rat
1303009Slc4a5solute carrier family 4 member 54115710101115810330Rat
1311313Mthfd2methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase4115811135115822663Rat
1307014Mob1aMOB kinase activator 1A4115831581115848561Rat
1305975Bola3bolA family member 34115853350115862797Rat
1590584Tet3tet methylcytosine dioxygenase 34115867412115964433Rat
7650908LOC102548361uncharacterized LOC1025483614115950040115953954Rat
1304799Dguokdeoxyguanosine kinase4115987101116014733Rat
41161074LOC120102320uncharacterized LOC1201023204116014672116016904Rat
2027Actg2actin gamma 2, smooth muscle4116021832116046475Rat
619963StambpStam binding protein4116055563116083563Rat
41018082LOC120102321uncharacterized LOC1201023214116080648116105711Rat
621062Clec4fC-type lectin domain family 4, member F4116129023116138744Rat
1565913Cd207CD207 molecule4116155229116161587Rat
41080233Gapdh-ps70Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 704116161930116162927Rat
9389444Vax2lventral anterior homeobox 2 like4116178416116195253Rat
621133Vax2ventral anterior homeobox 24116195528116219597Rat
11488278LOC108350721uncharacterized LOC1083507214116211039116218830Rat
1310619Atp6v1b1ATPase H+ transporting V1 subunit B14116223799116242475Rat
1561200Ankrd53ankyrin repeat domain 534116245561116253018Rat
1305851Tex261testis expressed 2614116253547116260730Rat
11437638LOC10835072260S ribosomal protein L27 pseudogene4116278373116281125Rat
1305057NagkN-acetylglucosamine kinase4116281179116293870Rat
1307930Paip2bpoly(A) binding protein interacting protein 2B4116292001116323387Rat
1309746Zfp638zinc finger protein 6384116355934116475051Rat
1586000Rps15-ps12ribosomal protein S15, pseudogene 124116373761116374229Rat
41152310LOC120102555U4 spliceosomal RNA4116423166116423314Rat
41233693LOC120102633small nucleolar RNA SNORA54116471399116471527Rat
1311023Dysfdysferlin4116490877116690709Rat
11421296LOC10835086960S ribosomal protein L31 pseudogene4116921291116921723Rat
631379Cyp26b1cytochrome P450, family 26, subfamily b, polypeptide 14117041808117058628Rat
1560638Exoc6bexocyst complex component 6B4117094741117550221Rat
41340927LOC120102746small nucleolar RNA U134117499018117499122Rat
1585860Smokxl-ps3sperm motility kinase X like, pseudogene 34117569008117569987Rat
41129602LOC120102669small nucleolar RNA SNORA174117587214117587345Rat
41282493LOC120102708small nucleolar RNA SNORA174117652870117652993Rat
3753Sprsepiapterin reductase4117671948117676292Rat
41009709LOC120102711small nucleolar RNA SNORA174117685079117685209Rat
1560795Spr-ps1sepiapterin reductase, pseudogene 14117689458117693286Rat
41359859LOC120102324uncharacterized LOC1201023244117723370117725707Rat
1564002Emx1empty spiracles homeobox 14117725148117741616Rat
628706Sfxn5sideroflexin 54117750213117869826Rat
1592069Rab11fip5RAB11 family interacting protein 54117871301117908819Rat
1584703Ass1-ps2argininosuccinate synthase 1, pseudogene 24117912849117927565Rat
1562910Notonotochord homeobox4117961163117965402Rat
1309153Smyd5SMYD family member 54117969615117984082Rat
1583112Pradc1protease-associated domain containing 14117984732117989710Rat
1306422Cct7chaperonin containing TCP1 subunit 74117989232118006478Rat
1566130Fbxo41F-box protein 414118007517118039547Rat
2546Egr4early growth response 44118047869118050328Rat
1311590Alms1ALMS1, centrosome and basal body associated protein4118125581118226005Rat
9142253Ybx1-ps2Y box binding protein 1, pseudogene 24118133614118134832Rat
41200685LOC120102325uncharacterized LOC1201023254118176974118190926Rat
621607Nat8f3N-acetyltransferase 8 (GCN5-related) family member 34118241792118246010Rat
621610Nat8f5N-acetyltransferase 8 (GCN5-related) family member 54118260323118285038Rat
1586026Emilin1-ps1elastin microfibril interfacer 1, pseudogene 14118262387118266491Rat
621609Nat8N-acetyltransferase 84118279521118284671Rat
2324329Nat8-ps1N-acetyltransferase 8, pseudogene 14118303631118305781Rat
1561619Nat8f2N-acetyltransferase 8 (GCN5-related) family member 24118319984118323159Rat
7636572Nat8f4N-acetyltransferase 8 (GCN5-related) family member 44118326092118332591Rat
621606Nat8f1N-acetyltransferase 8 (GCN5-related) family member 14118336208118342923Rat
1309786TprkbTp53rk binding protein4118342910118357908Rat
621605Nat8bN-acetyltransferase 8B4118359445118364351Rat
1307038Dusp11dual specificity phosphatase 114118367673118385183Rat
7547913LOC102549328uncharacterized LOC1025493284118400779118416614Rat
41388537LOC120102326uncharacterized LOC1201023264118416642118424029Rat
1564754Figlafolliculogenesis specific bHLH transcription factor4118432517118436846Rat
2042Add2adducin 24118444594118538505Rat
3849Tgfatransforming growth factor alpha4118618043118700897Rat
11502286LOC108350725uncharacterized LOC1083507254118778620118792730Rat
1304825Fam136afamily with sequence similarity 136, member A4118805129118811046Rat
1584713Snrpgsmall nuclear ribonucleoprotein polypeptide G4118812278118819827Rat
41150073LOC120102639small nucleolar RNA SNORA2/SNORA34 family4118815877118816012Rat
628652Pcyox1prenylcysteine oxidase 14118832114118842951Rat
11508600Trnag-ccc4transfer RNA glycine (anticodon CCC) 44118852419118852489Rat
1305742Tia1TIA1 cytotoxic granule-associated RNA binding protein4118852765118883252Rat
1306746C4h2orf42similar to human chromosome 2 open reading frame 424118887688118916808Rat
1561319Pcbp1poly(rC) binding protein 14118972698118974705Rat
1584384Tma7l1translation machinery associated 7 homolog like 14118986414118988248Rat
7667063LOC102554372uncharacterized LOC1025543724119012925119030617Rat
1560859Asprv1aspartic peptidase, retroviral-like 14119077415119078887Rat
1564525Mxd1max dimerization protein 14119097353119118080Rat
1310925Snrnp27small nuclear ribonucleoprotein U4/U6.U5 subunit 274119123676119133234Rat
1359265Gmcl1germ cell-less 1, spermatogenesis associated4119140598119179891Rat
621171Anxa4annexin A44119184378119241183Rat
41374913LOC120102638small nucleolar RNA SNORA2/SNORA34 family4119234751119234887Rat
1305520Aak1AP2 associated kinase 14119300128119451834Rat
2322888Rpl22-ps2ribosomal protein L22, pseudogene 24119350419119350883Rat
41257949LOC120102328uncharacterized LOC1201023284119415816119417839Rat
1307823Nfu1NFU1 iron-sulfur cluster scaffold4119458981119480162Rat
1549703Gfpt1glutamine fructose-6-phosphate transaminase 14119496691119546472Rat
1307144Antxr1ANTXR cell adhesion molecule 14119590770119778232Rat
40955934LOC120102329uncharacterized LOC1201023294119717819119729211Rat
1311934Gkn2gastrokine 24119778326119824366Rat
735014Gkn1gastrokine 14119790101119795389Rat
1597754Gkn3gastrokine 34119828859119833924Rat
1562986Bmp10bone morphogenetic protein 104119872066119877694Rat
1562105Arhgap25Rho GTPase activating protein 254119896844119974982Rat
708443Prokr1prokineticin receptor 14120022301120033367Rat
1565557Aplfaprataxin and PNKP like factor4120070471120122656Rat
41291607LOC120102330uncharacterized LOC1201023304120086931120112957Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10513D4Arb63064118050728118051034Ratregion
10525D4Mit311244108086268108086390Ratregion
10560D4Mit121794103194805103194984Ratregion
10561D4Wox201444103194798103194942Ratregion
10562D4Arb212804103194656103194936Ratregion
10782D4Mit81034102684777102684881Ratregion
11229D4Wox281374110891355110891492Ratregion
33905D4Mit1129549136052791360801Ratregion
33991D4Mit282204110275411110275633Ratregion
34023D4Mit291364117809401117809515Ratregion
11381D4Mgh171374114921280114921417Ratregion
11383D4Mit231204114921294114921414Ratregion
11409D4Wox181134118699850118699963Ratregion
11410D4Arb52474118699819118700066Ratregion
33696D4Mit151874113634394113634625Ratregion
36029D4Rat511704120093877120094047Ratregion
36043D4Rat491524117764993117765145Ratregion
36109D4Rat431474115861544115861680Ratregion
36368D4Mit324116200971116201124Ratregion
36378D4Mgh3321248615232386152535Ratregion
35286D4Rat3715149330831593308457Ratregion
35310D4Rat451644119925288119925452Ratregion
35325D4Rat4117449613012396130297Ratregion
35409D4Rat3414948537942185379614Ratregion
36870D4Rat3316048100612481006281Ratregion
36978D4Rat3813949585319395853334Ratregion
37062D4Rat421424114567908114568047Ratregion
37646D4Rat10812248284404882844186Ratregion
37868D4Rat1241464115948290115948441Ratregion
36544D4Rat7716549512805695128221Ratregion
36725D4Rat781604116553490116553633Ratregion
35003D4Rat501364118313054118313190Ratregion
35635D4Rat541714120102454120102625Ratregion
35669D4Rat3516449136661091366774Ratregion
35673D4Rat391544102981170102981329Ratregion
35721D4Rat7617848525374885253946Ratregion
39916D4Rat1752114105220727105220938Ratregion
38262D4Rat10321648342841983428649Ratregion
38344D4Rat1061544116179486116179656Ratregion
38360D4Rat1201864116786396116786582Ratregion
40586D4Rat23122648865668188656903Ratregion
40636D4Rat1802464115797041115797291Ratregion
40640D4Rat17124848821695788217207Ratregion
38682D4Rat972234109588035109588254Ratregion
38748D4Rat1092014115401426115401611Ratregion
39990D4Rat1772014112478605112478794Ratregion
40014D4Rat2332244107032553107032773Ratregion
40020D4Rat17316049248951492489678Ratregion
39180D4Rat13820048244335582443549Ratregion
39520D4Rat17023748423638084236623Ratregion
39528D4Rat1762044114627026114627242Ratregion
39530D4Rat21523048257601882576250Ratregion
42306D4Rat26614348472868084728829Ratregion
42308D4Rat2901344117123710117123846Ratregion
41456D4Rat1791554116601436116601590Ratregion
42705D4Rat26524248300743383007655Ratregion
42706D4Rat28923148300745983007658Ratregion
42707D4Rat23023448753215187532391Ratregion
42708D4Rat2322004103760884103761084Ratregion
42709D4Rat2672304105530657105530888Ratregion
42710D4Rat2682434114604799114605036Ratregion
40856D4Rat17414249422276294222908Ratregion
40878D4Rat1841034118928273118928386Ratregion
41586D4Rat17213349466112194661248Ratregion
43816D4Got6420648165562081655823Ratregion
43819D4Got6617748280301482803190Ratregion
43820D4Got7527349261823292618505Ratregion
43821D4Got6520248345449583454697Ratregion
43823D4Got881344116899150116899282Ratregion
43825D4Got1491444116809187116809331Ratregion
43826D4Got851294119615498119615629Ratregion
43827D4Got841504120000469120000619Ratregion
44796D10Got1171704110341308110341478Ratregion
60803D4Wox432549144941691449741Ratregion
60431D4Got15829648206668382066979Ratregion
60447D4Got6114748114230281142449Ratregion
60448D4Got6328848367604183676329Ratregion
60449D4Got6723848590100185901239Ratregion
60451D4Got6919348725177587251968Ratregion
60452D4Got7028849319926293199550Ratregion
60454D4Got7227549078304890783319Ratregion
60455D4Got7320549401004894010253Ratregion
60456D4Got7416349299129992991462Ratregion
60457D4Got7615548756588187566036Ratregion
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5090513AU0497962784110133169110133447Ratregion
5088623AU04867919948349313983493340Ratregion
5088759AU0487601944103030125103030315Ratregion
5081358AA9238812124104414640104414852Ratregion
5090161AU0495872184103344415103344633Ratregion
5090215AU0496192734103635251103635521Ratregion
5089075AU0489401464119228457119228605Ratregion
5082595BE11981315649017649890176650Ratregion
5081020RH1419182094119097380119097589Ratregion
5084510AI40975519748804190288042100Ratregion
5082753BF3900211234117405991117406114Ratregion
5082921BF39041715048185780181857955Ratregion
5086262BM38483521048420498784205197Ratregion
5086311BM38703420348172209181722294Ratregion
5081346UniSTS:2261511824117731352117731534Ratregion
5083127BF39081515049375655593756705Ratregion
5081639BE11774115748371337383713530Ratregion
5086843AA81923221448602814086028352Ratregion
5083885AA89314120748133269081332897Ratregion
5083980AI2323511174119141273119141390Ratregion
5503014Loxl313564115555575115556931Ratregion
5503105CRHR213748422524784225787Ratregion
5503107CCT71064118003931118004576Ratregion
5507489ECD0549673748134570981346446Ratregion
5503585UniSTS:4646631164117054705117054821Ratregion
5504224RH7556324848679577886796026Ratregion
5507674Hoxa10153748133299381334530Ratregion
5507690Igk-V157049770958597710155Ratregion
5503746Hoxa956548132386381324428Ratregion
5504410PMC196074P22324104291604104291836Ratregion
5504260G4326910849641862496418732Ratregion
5504274D2S1554E2504118973700118973950Ratregion
5504408PMC196178P12484102697318102697566Ratregion
5504867ha27071884106209232106209420Ratregion
5504969Tshr11249214266292142774Ratregion
5505820UniSTS:495551105448638051986381573Ratregion
5505760UniSTS:492639105048638051986381569Ratregion
5506113UniSTS:4983868548134348681343571Ratregion
5506322UniSTS:47475131148134286381343174Ratregion
5506140UniSTS:498461704104606177104606247Ratregion
5506437UniSTS:4793056004116467421116468021Ratregion
5506445UniSTS:4803022074114921402114921609Ratregion
5506642ECD0064489648126362681264522Ratregion
5506632ECD0030890848133201581332923Ratregion
5507175UniSTS:22501117848769912887699306Ratregion
5507377REN10070423148134545181345682Ratregion
5499519stSG609304109348125449681255589Ratregion
5499517stSG61060504111297395111297655Ratregion
5499521stSG609316103248126604681267080Ratregion
5500581RH1360641464118872930118873076Ratregion
5499739UniSTS:2343962124100791207100791419Ratregion
5499567AI3247018448126363581263719Ratregion
5499649MARC_6321-6322:992007238:1914115703010115703422Ratregion
5499523stSG60934921948130201581302234Ratregion
5499525stSG609369125648132439781325653Ratregion
5499639MARC_6217-6218:992007117:123548130204981302284Ratregion
5499839UniSTS:2349592354116294332116294567Ratregion
5499915UniSTS:2354822074118005695118006215Ratregion
5500747UniSTS:5764934548130219581302539Ratregion
5503704UniSTS:46753645948127230681272765Ratregion
5503708UniSTS:46753733548130840681308741Ratregion
5501307ECD1314550748141629981416807Ratregion
5501311ECD1433250348127735781277860Ratregion
5501323ECD1607740348129079881291201Ratregion
5501796MARC_12745-12746:1030738152:139848126341781263815Ratregion
5501798MARC_12813-12814:999878148:11664116283157116283961Ratregion
5506638ECD0041690248133298381333885Ratregion
5502030MARC_24177-24178:1033563974:16594103541402103542061Ratregion
5502766RPIA1034102731716102732464Ratregion
5507333REN9980723248118258881182820Ratregion
5507335REN10030227248125700381257275Ratregion
5507337REN10033825548126457881264833Ratregion
5507339REN10033924048126481181265051Ratregion
5507341REN10036325148127014581270396Ratregion
5507343REN10037526748127279781273064Ratregion
5507345REN10043624948128548581285734Ratregion
5507347REN10044427748128749281287769Ratregion
5507349REN10046423448129163681291870Ratregion
5507351REN10050725248130109481301346Ratregion
5507353REN10051127548130193781302212Ratregion
5507355REN10051225848130219781302454Ratregion
5507357REN10052224748130431781304564Ratregion
5507359REN10056323548131340581313640Ratregion
5507361REN10058022548131742681317651Ratregion
5507363REN10053326148130667081306931Ratregion
5507365REN10061924748132595381326200Ratregion
5507367REN10062025648132618081326436Ratregion
5507369REN10065822748133519281335419Ratregion
5507371REN10064223348133133781331570Ratregion
5507373REN10065925448133540081335654Ratregion
5507375REN10070322648134524881345474Ratregion
5507379REN10077122748136033981360566Ratregion
5507381REN10070626048134588781346147Ratregion
5507383REN10098922548142445881424683Ratregion
5507385REN10142623548153620081536435Ratregion
5502243AI3156818124118226192118227004Ratregion
5502718NEUROD643748484735884847795Ratregion
5502471RH124966844115561661115561745Ratregion
Position Markers

Flank 1: (D4Rat33)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2481,006,124 - 81,006,281 (+)MAPPER
Rnor_6.0481,874,073 - 81,874,227NCBI
Rnor_5.04146,540,904 - 146,541,058UniSTS
RGSC_v3.4480,205,350 - 80,205,504UniSTS
RGSC_v3.4480,205,349 - 80,205,504RGD
RGSC_v3.1480,481,479 - 80,481,634RGD
Celera475,898,515 - 75,898,669UniSTS
RH 3.4 Map4512.42RGD
RH 3.4 Map4512.42UniSTS
RH 2.0 Map4546.7RGD
SHRSP x BN Map440.85RGD
FHH x ACI Map447.95RGD
Cytogenetic Map4q24UniSTS
Flank 2: (D4Rat54)
Rat AssemblyChrPosition (strand)Source
mRatBN7.24120,102,454 - 120,102,625 (+)MAPPER
Rnor_6.04119,546,804 - 119,546,974NCBI
Rnor_5.04184,799,503 - 184,799,673UniSTS
RGSC_v3.44121,828,905 - 121,829,076RGD
RGSC_v3.44121,828,906 - 121,829,076UniSTS
RGSC_v3.14122,073,386 - 122,073,557RGD
Celera4109,069,673 - 109,069,839UniSTS
RH 3.4 Map4710.5RGD
RH 3.4 Map4710.5UniSTS
RH 2.0 Map4739.9RGD
SHRSP x BN Map456.08RGD
Cytogenetic Map4q34UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1582232Gluco25Glucose level QTL 253.60.0023blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)485253748148090731Rat
631689Scl4Serum cholesterol level QTL 41.90.008blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)495174120140174120Rat
1358352Srcrt3Stress Responsive Cort QTL 32.29blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)438465774146803430Rat
1549843Bw53Body weight QTL 530.0001body mass (VT:0001259)body weight gain (CMO:0000420)461697658103194791Rat
61445Strs3Sensitivity to stroke QTL 33cerebrum integrity trait (VT:0010549)post-insult time to onset of cerebrovascular lesion (CMO:0002343)44043338885433388Rat
6893678Bw108Body weight QTL 1082.60.006body mass (VT:0001259)body weight (CMO:0000012)44345797688457976Rat
1578655Bmd11Bone mineral density QTL 1111femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)490850165135850165Rat
1300116Hrtrt5Heart rate QTL 53.76heart pumping trait (VT:2000009)heart rate (CMO:0000002)4116179486151161268Rat
10755501Bp390Blood pressure QTL 3902.5arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)426775591168368347Rat
1357342Bw40Body weight QTL 400.001body mass (VT:0001259)body weight (CMO:0000012)476647384117676292Rat
631556Bp135Blood pressure QTL 1350.017arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)478881294117676292Rat
1358363Sradr3Stress Responsive Adrenal Weight QTL 36.19adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)457486946102486946Rat
61330Eau1Experimental allergic uveoretinitis QTL 10.0003uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)470362013132642728Rat
70167Bw22Body weight QTL 223.1body mass (VT:0001259)body weight (CMO:0000012)476647384117676292Rat
731165Uae21Urinary albumin excretion QTL 212.40.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)4106649412151649412Rat
737821Hcar9Hepatocarcinoma resistance QTL 93.7liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)4109866907167139601Rat
1549839Bw52Body weight QTL 520.0001body mass (VT:0001259)body weight gain (CMO:0000420)461697658115089733Rat
1549832Bss3Bone structure and strength QTL 311femur morphology trait (VT:0000559)femur midshaft cortical cross-sectional area (CMO:0001663)4109827074154827074Rat
70177Xhs1X-ray hypersensitivity QTL 125.1intestine integrity trait (VT:0010554)post-insult time to onset of moribundity (CMO:0001896)482798864152731274Rat
724522Bp146Blood pressure QTL 1462.20.0021arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)473630210118630210Rat
8694439Bw168Body weight QTL 1689.570.001retroperitoneal fat pad mass (VT:0010430)retroperitoneal fat pad weight to body weight ratio (CMO:0000635)44043341485433414Rat
61476Aia3Adjuvant induced arthritis QTL 33.9joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)486730991131730991Rat
8655906Rf60Renal function QTL 603.8blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)42949419581006281Rat
1641919Alc22Alcohol consumption QTL 220.0005drinking behavior trait (VT:0001422)ethanol drink intake rate (CMO:0001407)481192555126192555Rat
1354660Salc1Saline consumption QTL 111.26drinking behavior trait (VT:0001422)saline drink intake rate (CMO:0001627)444463908148090542Rat
2300179Bmd50Bone mineral density QTL 505.90.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)460928534105928534Rat
2317587Eae26Experimental allergic encephalomyelitis QTL 26nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)488656681103194984Rat
1298082Stresp4Stress response QTL 4blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)450119848146803430Rat
70192BpQTLcluster5Blood pressure QTL cluster 54.183arterial blood pressure trait (VT:2000000)absolute change in mean arterial blood pressure (CMO:0000533)462933508114921294Rat
2317586Eae25Experimental allergic encephalomyelitis QTL 259.300000190734863nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis duration (CMO:0001424)47888281783007655Rat
61364Iddm2Insulin dependent diabetes mellitus QTL 2blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)478885890102684881Rat
1578670Bss14Bone structure and strength QTL 1416.4femur morphology trait (VT:0000559)bone trabecular cross-sectional area (CMO:0002311)487327165132327165Rat
2317588Eae27Experimental allergic encephalomyelitis QTL 27nervous system integrity trait (VT:0010566)percentage of study population developing experimental autoimmune encephalomyelitis during a period of time (CMO:0001047)4103194805112478794Rat
1300139Hrtrt6Heart rate QTL 62.85heart pumping trait (VT:2000009)heart rate (CMO:0000002)439524264116179656Rat
70200Alc18Alcohol consumption QTL 189.2drinking behavior trait (VT:0001422)ethanol intake volume to total fluid intake volume ratio (CMO:0001591)456647873149491524Rat
1578657Bss12Bone structure and strength QTL 128.9femur morphology trait (VT:0000559)femoral neck cross-sectional area (CMO:0001697)460220938105220938Rat
1578658Bss13Bone structure and strength QTL 138femur strength trait (VT:0010010)femoral neck polar moment of inertia (CMO:0001670)460220938105220938Rat
1331759Hrtrt13Heart rate QTL 133.54628heart pumping trait (VT:2000009)heart rate (CMO:0000002)4110275411168266883Rat
724535Cm18Cardiac mass QTL 182.6heart mass (VT:0007028)calculated heart weight (CMO:0000073)4118856416163856416Rat
2316958Gluco58Glucose level QTL 5810blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)411320076180699135Rat
6478684Anxrr30Anxiety related response QTL 300.00087defecation behavior trait (VT:0010462)defecation rate (CMO:0000998)462753847107753847Rat
1578662Bss15Bone structure and strength QTL 1519.6femur width (VT:1000666)femoral neck width (CMO:0001695)487327165132327165Rat
2302051Pia28Pristane induced arthritis QTL 285.30.001blood autoantibody amount (VT:0003725)serum immunoglobulin G-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002112)473630210118630210Rat
2302049Pia32Pristane induced arthritis QTL 325.10.001blood autoantibody amount (VT:0003725)serum immunoglobulin G-type rheumatoid factor level relative to an arbitrary reference serum (CMO:0002112)4105789505150789505Rat
2306794Ean2Experimental allergic neuritis QTL 26.4nervous system integrity trait (VT:0010566)IFNG-secreting splenocyte count (CMO:0002122)48342841995853334Rat
6478763Anxrr46Anxiety related response QTL 460.07428locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4110870972155870972Rat
8662350Eae35Experimental allergic encephalomyelitis QTL 356.2blood tumor necrosis factor amount (VT:0008552)inflammatory exudate tumor necrosis factor level (CMO:0001435)4100834579103761084Rat
6478760Anxrr45Anxiety related response QTL 450.06717locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)4110870972155870972Rat
8552782Vie1Viral induced encephalitis QTL 126.4brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)43443048482490359Rat
634311Sach7Saccharin preference QTL 7taste sensitivity trait (VT:0001986)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)45711443281266970Rat
1331802Srn5Serum renin concentration QTL 53.045renin activity (VT:0005581)plasma renin activity level (CMO:0000116)4119428175157578333Rat
738009Sach4Saccharine consumption QTL 44.90.000016consumption behavior trait (VT:0002069)saccharin intake volume to total fluid intake volume ratio (CMO:0001601)459948935154902892Rat
631261Tcas3Tongue tumor susceptibility QTL 36.88tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)41081417091360527Rat
2312567Glom19Glomerulus QTL 191.90.006kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)445456990146803430Rat
738015Pia9Pristane induced arthritis QTL 94.50.048joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)480694870125694870Rat
7207480Bss105Bone structure and strength QTL 1058.1femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)4109827074154827074Rat
6478772Anxrr49Anxiety related response QTL 490.15488defecation behavior trait (VT:0010462)defecation rate (CMO:0000998)462753847107753847Rat
634335Anxrr16Anxiety related response QTL 167.22locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)493308457167139447Rat
631646Stl4Serum triglyceride level QTL 46.50.0001blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)473169846132642728Rat
634334Xhs3X-ray hypersensitivity QTL 310intestine integrity trait (VT:0010554)post-insult time to onset of moribundity (CMO:0001896)484728680129854654Rat
2312569Pur19Proteinuria QTL 193.40.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)46588210796130297Rat
8655961Kidm43Kidney mass QTL 4318kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)436303261103194984Rat
61406Scwia1Streptococcal cell wall induced arthritis QTL 12.3joint integrity trait (VT:0010548)experimental arthritis severity measurement (CMO:0001459)4106805662151805662Rat
1354612Foco1Food consumption QTL 18.87eating behavior trait (VT:0001431)food intake rate (CMO:0000427)444463908148090542Rat
634344Hcar7Hepatocarcinoma resistance QTL 77.8liver integrity trait (VT:0010547)liver tumorous lesion number (CMO:0001068)470808386115808386Rat
2303168Bp330Blood pressure QTL 3304.250.017arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)45214602146446691Rat
8552801Bw143Body weight QTL 1437.3body mass (VT:0001259)change in body weight to body weight ratio (CMO:0002216)43443048482490359Rat
738031Alc14Alcohol consumption QTL 147.60.00003consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)459948935154902892Rat
1576316Ept5Estrogen-induced pituitary tumorigenesis QTL 53.8pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)483428419177635233Rat
8552807Vie4Viral induced encephalitis QTL 47.3brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)46293350882490359Rat
631662Hcar2Hepatocarcinoma resistance QTL 23.10.0003liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)478878504123878504Rat
1576305Emca6Estrogen-induced mammary cancer QTL 65.8mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)444463720155883716Rat
61418Pia5Pristane induced arthritis QTL 54.5joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)462277855128289560Rat
631651Bp124Blood pressure QTL 1243arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)462879517107879517Rat
8552809Vie5Viral induced encephalitis QTL 525.3brain integrity trait (VT:0010579)encephalitis incidence/prevalence measurement (CMO:0002361)43443048482490359Rat
738016Alc16Alcohol consumption QTL 163.60.00015consumption behavior trait (VT:0002069)ethanol drink intake rate to body weight ratio (CMO:0001616)459948935154902892Rat
1558651Swd3Spike wave discharge measurement QTL 34.620.000024brain electrophysiology trait (VT:0010557)brain spike-and-wave discharge frequency (CMO:0001742)45843213392991462Rat
1358202Gluco11Glucose level QTL 112.40.02adipocyte glucose uptake trait (VT:0004185)absolute change in adipocyte glucose uptake (CMO:0000873)485379421167139601Rat
1641833Alc21Alcohol consumption QTL 218.60.0001drinking behavior trait (VT:0001422)ethanol drink intake rate (CMO:0001407)456698790126192555Rat
2306899Bp338Blood pressure QTL 3380.071arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)481006124120102625Rat
631546Bp86Blood pressure QTL 863.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)45711443291360801Rat
631674Iddm14Insulin dependent diabetes mellitus QTL 14blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)464528739157573521Rat
12798519Anxrr54Anxiety related response QTL 542.540.05locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4114627026159627026Rat
6478743Anxrr40Anxiety related response QTL 400.83076defecation behavior trait (VT:0010462)defecation rate (CMO:0000998)462753847107753847Rat
12798523Anxrr56Anxiety related response QTL 562.830.05locomotor behavior trait (VT:0001392)amount of experiment time spent in a discrete space in an experimental apparatus (CMO:0000958)485253748150276390Rat
7394826Bw126Body weight QTL 1260.002body mass (VT:0001259)body weight gain (CMO:0000420)46293326987483707Rat
61434Cia3Collagen induced arthritis QTL 34.8joint integrity trait (VT:0010548)joint inflammation composite score (CMO:0000919)4103194656148194656Rat
12798520Anxrr55Anxiety related response QTL 554.450.01locomotor behavior trait (VT:0001392)number of rearing movements with lid-pushing in an experimental apparatus (CMO:0002715)432583980114627242Rat
12798527Anxrr58Anxiety related response QTL 584.110.05locomotor behavior trait (VT:0001392)distance moved per unit of time into, out of or within a discrete space in an experimental apparatus (CMO:0001493)4119463257147278687Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general smaller SBP levels observed under high salt diet as compared to parental SHR 2306880
qtl_general SBP-related phenotypes were observed only under normal salt intake 2306880
qtl_general measurement method:1% NaCl solution was given in drinking water over 2 weeks; 4-6 week old males were anesthetized with ether and catheters were implanted, blood pressure was recorded after 24 hrs over a period of 30 min; heart rate was determined by bp pulses 2306880
qtl_general allele:BN allele is responsible for low blood pressure 2306880
qtl_general software used: ANOVA 2306880
qtl_general number of animals used:23 2306880