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QTL Registration

General

QTL: Vencon1 (Ventilatory control QTL 1) Rattus norvegicus

Symbol:

Vencon1

Name:

Ventilatory control QTL 1

RGD ID:

2303618

Trait:

respiration trait (VT:0001943)

Measurement Type:

oxygen consumption (CMO:0002169)

LOD Score:

3.8

P Value:

Not Available

Variance:

Not Available

Position

Rat Assembly	Chr	Position (strand)	Source	JBrowse
GRCr8	5	100,826,632 - 145,826,632	RGD_MAPPER_PIPELINE

Cross Type:

intercross

Strains Crossed:

SD/HsdCwr BN/HsdMcwiCwr

Annotation Click to see Annotation Detail View

Experimental Data Annotations Click to see Annotation Detail View

Clinical Measurement

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Vencon1	Rat	oxygen consumption		IDA		2303609		RGD

Experimental Condition

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Vencon1	Rat	control condition		IDA		2303609		RGD

Measurement Method

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Vencon1	Rat	air displacement plethysmography		IDA		2303609		RGD

Rat Strain

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Vencon1	Rat	BN/HsdMcwiCwr		IEA		2303609		RGD
Vencon1	Rat	SD/HsdCwr		IEA		2303609		RGD

Vertebrate Trait

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Vencon1	Rat	respiration trait		IDA		2303609		RGD

Experimental Data Annotations Click to see Annotation Detail View

Clinical Measurement

oxygen consumption (IDA)

Experimental Condition

control condition (IDA)

Measurement Method

air displacement plethysmography (IDA)

Vertebrate Trait

respiration trait (IDA)

Rat Strain

BN/HsdMcwiCwr (IEA)

SD/HsdCwr (IEA)

References

References - curated

#	Reference Title	Reference Citation
1.	Data registered by Dr. Moreno	Personal communication between Dr. Carol Moreno and the RGD curators.

Region

Markers in Region

The following Markers overlap with this region.

RGD ID

Symbol

Expected Size

Chr

Start

Stop

Species

Match

Position Markers

Peak: (D5Rat157)

Rat Assembly	Chr	Position (strand)	Source
GRCr8	5	123,326,551 - 123,326,713 (+)	Marker Load Pipeline
RH 3.4 Map	5	716.1	RGD
RH 3.4 Map	5	716.1	UniSTS
RH 2.0 Map	5	706.9	RGD
SHRSP x BN Map	5	63.7699	RGD

Additional Information

RGD Curation Notes

Note Type	Note	Reference
qtl_cross_type	intercross

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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QTL: Vencon1 (Ventilatory control QTL 1) Rattus norvegicus