Iddm36 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Iddm36 (Insulin dependent diabetes mellitus QTL 36) Rattus norvegicus

Symbol: Iddm36
Name: Insulin dependent diabetes mellitus QTL 36
RGD ID: 2300002
Trait: blood glucose amount   (VT:0000188)    
Measurement Type: blood glucose level   (CMO:0000046)    
LOD Score: 1.98
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2179,991,286 - 40,540,197RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01710,529,709 - 42,542,027RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01712,655,344 - 44,408,022RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41716,053,169 - 47,628,829RGD_MAPPER_PIPELINERGSC3.4
Cross Type: Not Available
Strains Crossed: ACI.BBDP-(RT1u)(Gimap5)/Sunn BBDP/WorSunn 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain

References

References - curated
# Reference Title Reference Citation
1. Unpublished observations for Iddm QTL Personal communication with Dr. Wallis
2. TYPE 1 DIABETES IN THE BB RAT: A POLYGENIC DISEASE. Wallis RH, etal., Diabetes. 2009 Apr;58(4):1007-17. Epub 2009 Jan 23

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
621353Cltbclathrin, light chain B171000151210019201Rat
1309691Higd2aHIG1 hypoxia inducible domain family, member 2A171002185310022777Rat
1305727Nop16NOP16 nucleolar protein171002295010027867Rat
1303298Arl10ADP-ribosylation factor like GTPase 10171003020910038664Rat
1359256LOC306766hypothetical LOC306766171004914210061819Rat
2319689Simc1SUMO-interacting motifs containing 1171006175210106938Rat
1566033RGD1566033similar to BC003940 protein171012156810121915Rat
1311669Thoc3THO complex subunit 3171014318410152375Rat
40998148LOC120097924uncharacterized LOC120097924171018108010210110Rat
9251698Lnc012long non-coding RNA 012171020480010237980Rat
70945Cplx2complexin 2171021957710292835Rat
2831Hrh2histamine receptor H 2171036835510407791Rat
41294837LOC120097817uncharacterized LOC120097817171044303610449288Rat
6502900Rplp0-ps1ribosomal protein lateral stalk subunit P0, pseudogene 1171046213410463316Rat
11442307LOC10834850960S ribosomal protein L35a pseudogene171047781810478314Rat
1308482Sfxn1sideroflexin 1171048625010522640Rat
40930565LOC120098019U2 spliceosomal RNA171048650010486619Rat
2518Drd1dopamine receptor D1171054044010544971Rat
41166359LOC120098032U4 spliceosomal RNA171073729910737389Rat
7662067LOC102552119uncharacterized LOC102552119171080346010809023Rat
11386207LOC108348510uncharacterized LOC108348510171093153910966537Rat
7597597LOC102552470uncharacterized LOC102552470171101673911018366Rat
40944361LOC120097819uncharacterized LOC120097819171105048111058723Rat
41316127LOC120097868uncharacterized LOC120097868171105891611066506Rat
11404592LOC108348511uncharacterized LOC108348511171107059611085374Rat
3116Msx2msh homeobox 2171109721411102879Rat
11396780LOC108348476spermatogenesis-associated protein 31-like171116291711169296Rat
41378093LOC120097738spermatogenesis-associated protein 31A3-like171136024111363236Rat
7585937LOC102547119spermatogenesis-associated protein 31C2-like171142981911438281Rat
7609640LOC102554142uncharacterized LOC102554142171182708911861334Rat
7700893LOC102554241uncharacterized LOC102554241171186512311877155Rat
1307140Sptlc1serine palmitoyltransferase, long chain base subunit 1171187724911916295Rat
1561671Uqcc1-ps1ubiquinol-cytochrome c reductase complex assembly factor 1, pseudogene 1171193602611936668Rat
1305275Ror2receptor tyrosine kinase-like orphan receptor 2171197283012148152Rat
41372426LOC120097990small nucleolar RNA SNORA17171221618312216312Rat
11492159LOC108353155uncharacterized LOC108353155171223662712279384Rat
620972Nfil3nuclear factor, interleukin 3 regulated171228049912295728Rat
41288467LOC120097877uncharacterized LOC120097877171230628612312966Rat
1306087AuhAU RNA binding methylglutaconyl-CoA hydratase171232952212424896Rat
41233374LOC120097808uncharacterized LOC120097808171250207712504880Rat
11461795LOC108348512uncharacterized LOC108348512171250403312533736Rat
41174187Rps28-ps2ribosomal protein S28, pseudogene 2171253813512582827Rat
3796Sykspleen associated tyrosine kinase171260461512678437Rat
11501598LOC108348513uncharacterized LOC108348513171268618912689484Rat
9299224LOC103694041uncharacterized LOC103694041171272432212729314Rat
1305580Diras2DIRAS family GTPase 2171273004012761511Rat
41235352LOC120098002small nucleolar RNA SNORA17171286885012868949Rat
11492955LOC108348514uncharacterized LOC108348514171287073912876327Rat
41169198LOC120097901uncharacterized LOC120097901171297591612979231Rat
7574542LOC102555869uncharacterized LOC102555869171306004213082861Rat
6498862LOC100910343uncharacterized LOC100910343171311055013133633Rat
41314589LOC120097837uncharacterized LOC120097837171315814913170015Rat
41121784LOC120097809uncharacterized LOC120097809171322849613251893Rat
1311796Gadd45ggrowth arrest and DNA-damage-inducible, gamma171337684213378587Rat
1310554Sema4dsemaphorin 4D171343032413537146Rat
620991Secisbp2SECIS binding protein 2171353851313569573Rat
1562047Cks2CDC28 protein kinase regulatory subunit 2171357061113575770Rat
41338494LOC120097978small nucleolar RNA SNORA2/SNORA34 family171357293913573075Rat
69348Shc3SHC adaptor protein 3171365224713772710Rat
1583843S1pr3sphingosine-1-phosphate receptor 3171378105013794408Rat
7587129LOC102556322uncharacterized LOC102556322171381457213820743Rat
41062017LOC120097822uncharacterized LOC120097822171386107413864947Rat
1594820Nxnl2nucleoredoxin-like 2171403115114035897Rat
1306210Spin1spindlin 1171405568514105366Rat
7610838LOC102556474uncharacterized LOC102556474171411592414122693Rat
40964660LOC120097800thymosin beta-10-like171413565414135897Rat
1594779Atp5mc2-ps5ATP synthase membrane subunit c locus 2, pseudogene 5171424519614245875Rat
7547464LOC102546542uncharacterized LOC102546542171425869914265934Rat
11459529LOC108353141uncharacterized LOC108353141171426706814285443Rat
7647881LOC102549715uncharacterized LOC102549715171428637114290564Rat
41041361LOC120097933uncharacterized LOC120097933171429506114305709Rat
1594767Wbp11-ps4WW domain binding protein 11, pseudogene 4171430358414309651Rat
41180815LOC120097801spermatogenesis-associated protein 31E1-like171431743314324559Rat
1593560LOC689303similar to vitamin A-deficient testicular protein 11-like171433870014423635Rat
1593548LOC689316hypothetical protein LOC689316171435724914421194Rat
1566133Fbxw17F-box and WD-40 domain protein 17171435953314379386Rat
1566043Nutm2fNUT family member 2F171442364614437059Rat
7655438LOC102548031uncharacterized LOC102548031171446404814472628Rat
41279858LOC120097807uncharacterized LOC120097807171447808214481647Rat
7579019LOC102546342uncharacterized LOC102546342171450942014516154Rat
11489292LOC108353122uncharacterized LOC108353122171457522214601220Rat
1592325LOC689437similar to vitamin A-deficient testicular protein 11-like171460136514608162Rat
11455007Trnak-cuu17transfer RNA lysine (anticodon CUU) 17171461041314610485Rat
1592314Gtf2f2-ps1general transcription factor IIF subunit 2, pseudogene 1171461069614614672Rat
1592304LOC689458similar to vitamin A-deficient testicular protein 11-like171462039514628951Rat
41165812LOC120097805uncharacterized LOC120097805171462205114627071Rat
6497608Spata31c2SPATA31 subfamily C member 2171465709614664280Rat
41249018LOC120097804uncharacterized LOC120097804171468443114689912Rat
41030591LOC120097806uncharacterized LOC120097806171470894714739691Rat
41379058LOC120097802igE-binding protein-like171475688314791952Rat
1591101LOC689526hypothetical protein LOC689526171478035614786234Rat
40940609LOC120097917uncharacterized LOC120097917171479397714824723Rat
7733938LOC102549716high mobility group protein B1-like171484535114924605Rat
1591058LOC689569similar to vitamin A-deficient testicular protein 11-like171486848614873837Rat
621022Iars1isoleucyl-tRNA synthetase 1171494091914987277Rat
41074434LOC120097976small nucleolar RNA SNORA24171496187714961996Rat
41003373LOC120098012small nucleolar RNA SNORA84171498507314985205Rat
1309551Nol8nucleolar protein 8171499039415013784Rat
1589530Cenppcentromere protein P171501386915189312Rat
1308171Ognosteoglycin171503206915052626Rat
621818Omdosteomodulin171506021715068441Rat
41399398LOC120097749uncharacterized LOC120097749171506893115069724Rat
1549776Aspnasporin171507991015104369Rat
11498038LOC10834852360S ribosomal protein L7a pseudogene171508826715090514Rat
6495217Rpl6-ps6ribosomal protein L6, pseudogene 6171511115315112082Rat
2320282Ecm2extracellular matrix protein 2171512019415152536Rat
1311271Ippkinositol-pentakisphosphate 2-kinase171519019115235203Rat
2319147LOC100361933ribosomal protein S12-like171524259715243105Rat
735093Bicd2BICD cargo adaptor 2171525977315304889Rat
1311725Fgd3FYVE, RhoGEF and PH domain containing 3171532484815387271Rat
1310933Susd3sushi domain containing 3171540084515417851Rat
1306058Card19caspase recruitment domain family, member 19171543257215445318Rat
3179Ninj1ninjurin 1171545280415461684Rat
1307284Wnk2WNK lysine deficient protein kinase 2171550367215612479Rat
41165672Trnaa-ugc8transfer RNA alanine (anticodon UGC) 8171561598715616059Rat
7574079Kif11-ps1kinesin family member 11, pseudogene 1171566850515673667Rat
1306643Fam120afamily with sequence similarity 120A171568423315774964Rat
7615661LOC102550793uncharacterized LOC102550793171577650115782662Rat
1305228Phf2PHD finger protein 2171578322115851209Rat
7680951LOC102552096uncharacterized LOC102552096171594656815968132Rat
1310884Barx1BARX homeobox 1171599041215993887Rat
1307698Ptpdc1protein tyrosine phosphatase domain containing 1171602896416076512Rat
41118493LOC120097987small nucleolar RNA SNORA17171608215716082288Rat
41063048LOC120097935uncharacterized LOC120097935171610527116116498Rat
2325409Mirlet7a1microRNA let-7a-1171611376616113859Rat
4888607Mirlet7f-1microRNA let7f-1171611413016114226Rat
2325350Mirlet7f-1osmicroRNA let7f-1, opposite strand171611413416114222Rat
2325622Mirlet7dmicroRNA let-7d171611589316115990Rat
4888582Mir3596bmicroRNA 3596b171611589416115988Rat
11486166LOC108348525uncharacterized LOC108348525171612050116139230Rat
1304631Zfp169zinc finger protein 169171613920416167242Rat
631428Id4inhibitor of DNA binding 4171638938716391956Rat
41116927LOC120097866uncharacterized LOC120097866171648131216485779Rat
11394758LOC108348527uncharacterized LOC108348527171649932816539903Rat
7517520LOC102546683uncharacterized LOC102546683171650457716512507Rat
7665766LOC102546543uncharacterized LOC102546543171655822116565695Rat
11458415LOC108348529uncharacterized LOC108348529171671517916738936Rat
11513126LOC108348530uncharacterized LOC108348530171680555716815648Rat
41088446LOC120098023U2 spliceosomal RNA171691301416913182Rat
41196198LOC120097957uncharacterized LOC120097957171730269417306531Rat
41337267LOC120097909uncharacterized LOC120097909171732324317338286Rat
1308856Rnf144bring finger protein 144B171743127117580687Rat
7539610LOC102555870uncharacterized LOC102555870171747659317480276Rat
41228713LOC120097851uncharacterized LOC120097851171756238317563112Rat
41199942LOC120098010small nucleolar RNA U13171756722117567325Rat
1303246DekDEK proto-oncogene171758080417602825Rat
1310701Kdm1blysine demethylase 1B171760296117643865Rat
1585162Tpmtthiopurine S-methyltransferase171764408817662709Rat
1585156Nlrp4el-ps1NLR family, pyrin domain containing 4E like, pseudogene 1171766237517674258Rat
735081Nhlrc1NHL repeat containing E3 ubiquitin protein ligase 1171767437517675565Rat
41108574Nkiras1-ps1NFKB inhibitor interacting Ras-like 1, pseudogene 1171770607117708553Rat
11460312LOC108348531uncharacterized LOC108348531171774517017754615Rat
1307825Kif13akinesin family member 13A171776659717948517Rat
41071758LOC120098057U6 spliceosomal RNA171779365417793761Rat
41376518LOC120098042U6 spliceosomal RNA171793318517933292Rat
41292693LOC120097853uncharacterized LOC120097853171795560517958448Rat
2318699Rpl27-ps4ribosomal protein L27, pseudogene 4171796432517965331Rat
3216Nup153nucleoporin 153171797221718024876Rat
1307845Fam8a1family with sequence similarity 8, member A1171802660118035509Rat
41060467LOC120097854uncharacterized LOC120097854171803563818039319Rat
620310Cap2cyclase associated actin cytoskeleton regulatory protein 2171805423418203453Rat
41042245LOC120097856uncharacterized LOC120097856171806025718061663Rat
41026648LOC120097855uncharacterized LOC120097855171820273618209427Rat
7721817LOC102554989zinc finger protein 120-like171824521818247103Rat
1584029Rbm24RNA binding motif protein 24171827568118288231Rat
40946443LOC120097857uncharacterized LOC120097857171828002018355557Rat
1564013Stmnd1stathmin domain containing 1171839331218420655Rat
41314893LOC120097858uncharacterized LOC120097858171846560018481515Rat
11379150LOC108348532uncharacterized LOC108348532171853856118563808Rat
7623637LOC102554492uncharacterized LOC102554492171869579918734682Rat
3624Atxn1ataxin 1171873749119142360Rat
40936389LOC120097815uncharacterized LOC120097815171894291818949851Rat
41278316LOC120097816uncharacterized LOC120097816171910285819115253Rat
70980Gmprguanosine monophosphate reductase171915182019189626Rat
41288532LOC120098056U6 spliceosomal RNA171921150919211617Rat
1305761Mylipmyosin regulatory light chain interacting protein171928664919308295Rat
7700383LOC102549787uncharacterized LOC102549787171932381619431768Rat
41108695LOC120098037U6 spliceosomal RNA171938554119385647Rat
41032533LOC120097842uncharacterized LOC120097842171956586619579796Rat
41213519LOC120098051U6 spliceosomal RNA171966594119666044Rat
41013042LOC120098043U6 spliceosomal RNA171967016119670266Rat
1590759Dtnbp1dystrobrevin binding protein 1171968521819776668Rat
1591663Jarid2jumonji and AT-rich interaction domain containing 2171977748719957696Rat
40933042LOC120097934uncharacterized LOC120097934171995622019960137Rat
41335497LOC120097859uncharacterized LOC120097859172001479820026288Rat
41068176LOC120097911uncharacterized LOC120097911172007800520086112Rat
41323190LOC120097782uncharacterized LOC120097782172011596920118981Rat
11483241LOC108348536uncharacterized LOC108348536172025514920383065Rat
9163311LOC103694056proteasome maturation protein pseudogene172043174520435233Rat
11465102LOC108348537uncharacterized LOC108348537172045137520460265Rat
1596092LOC690414hypothetical protein LOC690414172055384920563628Rat
7622881LOC102550662uncharacterized LOC102550662172074021520794748Rat
9256189LOC103694054uncharacterized LOC103694054172074715120765166Rat
41243183LOC120097898uncharacterized LOC120097898172080675920815422Rat
7684578LOC102551899uncharacterized LOC102551899172082199820859865Rat
1309677Cd83CD83 molecule172088730920907009Rat
41103460LOC120097831uncharacterized LOC120097831172092314420923960Rat
40964924LOC120097907uncharacterized LOC120097907172093149320940445Rat
1560399Rnf182ring finger protein 182172102611021081760Rat
1596027Slc25a31-ps1solute carrier family 25 member 31, pseudogene 1172112521921126780Rat
1307673Mcur1mitochondrial calcium uniporter regulator 1172114252621159651Rat
41040258LOC120097874uncharacterized LOC120097874172117485221184327Rat
9123009LOC103694070uncharacterized LOC103694070172119817921201275Rat
1561940Ranbp9RAN binding protein 9172122080721303009Rat
41387636LOC120098048U6 spliceosomal RNA172127738321277488Rat
1565934Nol7nucleolar protein 7172130365021307042Rat
1303285Sirt5sirtuin 5172131002821337137Rat
41151729LOC120098011small nucleolar RNA U13172139180521391892Rat
1311507Gfod1Gfo/Idh/MocA-like oxidoreductase domain containing 1172140014221504972Rat
40962041LOC120097840eukaryotic translation initiation factor 1-like172150512121516312Rat
7593311LOC102547830uncharacterized LOC102547830172151832221530747Rat
1307661Tbc1d7TBC1 domain family, member 7172153070921548556Rat
1303187Phactr1phosphatase and actin regulator 1172156036422040166Rat
41094232LOC120097810uncharacterized LOC120097810172180470021814935Rat
41115611LOC120097835uncharacterized LOC120097835172223117222259744Rat
1593459Jpt1-ps2Jupiter microtubule associated 1, pseudogene 2172225618122257112Rat
2532Edn1endothelin 1172245492422460812Rat
7743140LOC102548003uncharacterized LOC102548003172253693022542986Rat
727847Hivep1HIVEP zinc finger 1172258501622714517Rat
41322840LOC120097876uncharacterized LOC120097876172269803822701819Rat
11494799LOC108348545uncharacterized LOC108348545172271467622746788Rat
41028282LOC120097739uncharacterized LOC120097739172287609322895115Rat
1305679Adtrpandrogen-dependent TFPI-regulating protein172293001222993834Rat
2324560LOC100362172LRRGT00112-like172296404522985226Rat
7566878Rpl9-ps9ribosomal protein L9, pseudogene 9172299441922995920Rat
41358003LOC120097814uncharacterized LOC120097814172308114423100703Rat
1561506Tmem170btransmembrane protein 170B172313115123169946Rat
7587473LOC102551541uncharacterized LOC102551541172319098523291014Rat
1306276Nedd9neural precursor cell expressed, developmentally down-regulated 9172328979323468026Rat
7509506LOC102548345uncharacterized LOC102548345172335925423405529Rat
1591023Smim13small integral membrane protein 13172349766223515705Rat
41070119LOC120097952uncharacterized LOC120097952172351561123518056Rat
4888554Mir3566microRNA 3566172351605923516167Rat
1308605Elovl2ELOVL fatty acid elongase 2172354452023584855Rat
1564922Sycp2lsynaptonemal complex protein 2-like172358921723645273Rat
1311127Gcm2glial cells missing transcription factor 2172365263723661754Rat
3036Makmale germ cell-associated kinase172368367423731125Rat
621692Tmem14ctransmembrane protein 14C172373376923739906Rat
1565353Pak1ip1PAK1 interacting protein 1172374221723753325Rat
1562963C17h6orf52similar to human chromosome 6 open reading frame 52172375335923776251Rat
9425447LOC103694058uncharacterized LOC103694058172378845923798379Rat
1303198Gcnt2glucosaminyl (N-acetyl) transferase 2172379685923901625Rat
40995008LOC120097872uncharacterized LOC120097872172380082223808093Rat
41295529LOC120097871uncharacterized LOC120097871172384817723852178Rat
1303198Gcnt2glucosaminyl (N-acetyl) transferase 2172386660223868691Rat
41224811Gcnt2-ps1glucosaminyl (N-acetyl) transferase 2, pseudogene 1172390937423917596Rat
41119229Rpl29-ps4ribosomal protein L29, pseudogene 4172398021123980662Rat
2324472Rpl13a-ps4ribosomal protein L13A, pseudogene 4172398563923986287Rat
1310267Tfap2atranscription factor AP-2 alpha172402871624047507Rat
2324338LOC100362620CDC28 protein kinase regulatory subunit 2172427143124271897Rat
1589812Ofcc1orofacial cleft 1 candidate 1172450691924813225Rat
41391418LOC120097969U1 spliceosomal RNA172497361624973777Rat
7684968LOC102555259uncharacterized LOC102555259172503663825038772Rat
40996526Rps3a-ps7ribosomal protein S3a, pseudogene 7172505761625058293Rat
41383133LOC120098031U4 spliceosomal RNA172506229225062377Rat
11490069LOC108348547uncharacterized LOC108348547172506851525073508Rat
1589788Ntmt1-ps1N-terminal Xaa-Pro-Lys N-methyltransferase 1, pseudogene 1172510218825102849Rat
2322676Prc1-ps1protein regulator of cytokinesis 1, pseudogene 1172582989325831593Rat
41019260LOC120097954uncharacterized LOC120097954172584235225846557Rat
1307183Slc35b3solute carrier family 35 member B3172584659025873115Rat
1560349Pole3-ps2DNA polymerase epsilon 3, accessory subunit, pseudogene 2172613592726136417Rat
1311056Eef1e1eukaryotic translation elongation factor 1 epsilon 1172614865226159358Rat
1306846Bloc1s5biogenesis of lysosomal organelles complex 1 subunit 5172617196526197276Rat
41255156LOC120097825uncharacterized LOC120097825172620476926214358Rat
41051359LOC120097889igE-binding protein-like172624113626242116Rat
2323973Txndc5thioredoxin domain containing 5172628988026318025Rat
2214Bmp6bone morphogenetic protein 6172631812126469034Rat
7710914LOC102556358uncharacterized LOC102556358172647853126577796Rat
41009486LOC120097821uncharacterized LOC120097821172652309426537904Rat
1309020Snrnp48small nuclear ribonucleoprotein U11/U12 subunit 48172659626626616058Rat
41097826LOC120098045U6 spliceosomal RNA172661781826617923Rat
1305794Dspdesmoplakin172662360226671692Rat
7662893LOC102546383uncharacterized LOC102546383172672250626731353Rat
1306086Riok1RIO kinase 1172676744026789900Rat
1306102Cage1cancer antigen 1172678997526828210Rat
41162238LOC120097850uncharacterized LOC120097850172682784326833614Rat
1310961Ssr1signal sequence receptor subunit 1172683372026861821Rat
1310904Rreb1ras responsive element binding protein 1172687668627002615Rat
41024756LOC120097784uncharacterized LOC120097784172693041726936663Rat
1563601RGD1563601similar to Tpi1 protein172710143127102823Rat
6500583LOC100909970uncharacterized LOC100909970172717681727186106Rat
41022734LOC120097830uncharacterized LOC120097830172720362027213382Rat
41115616LOC120097899uncharacterized LOC120097899172724529327253746Rat
7584662LOC102549751uncharacterized LOC102549751172730850727321615Rat
11499165LOC108348548uncharacterized LOC108348548172732163427337157Rat
40988637LOC120098041U1 spliceosomal RNA172733777527337940Rat
41289478LOC120097796uncharacterized LOC120097796172734273527349500Rat
6497764LOC100910628uncharacterized LOC100910628172734624427350547Rat
1309936Ly86lymphocyte antigen 86172741580727499695Rat
41341903Phgdh-ps3phosphoglycerate dehydrogenase, pseudogene 3172749288027494388Rat
621495F13a1coagulation factor XIII A1 chain172781572327992494Rat
1564781Eno1-ps13enolase 1, pseudogene 13172802393328025229Rat
40976926LOC120097828uncharacterized LOC120097828172804854328051080Rat
621586Nrn1neuritin 1172812996928138898Rat
41223489LOC120097730uncharacterized LOC120097730172813469328137678Rat
41034711LOC120097996small nucleolar RNA SNORA17172820150128201626Rat
1309416Fars2phenylalanyl-tRNA synthetase 2, mitochondrial172831921528746217Rat
7672286Lyrm4LYR motif containing 4172874644228861849Rat
41372163Hdac1-ps16Histone deacetylase 1, pseudogene 16172884967128850978Rat
1308930Ppp1r3gprotein phosphatase 1, regulatory subunit 3G172887495628878288Rat
7653735LOC102550566uncharacterized LOC102550566172887776428888892Rat
1310228Rpp40ribonuclease P/MRP subunit p40172894773028956790Rat
1549745Cdylchromodomain Y-like172898200929204345Rat
41292709LOC120097861uncharacterized LOC120097861172912686329136858Rat
1589720Rps7-ps16ribosomal protein S7, pseudogene 16172926770129268243Rat
41025517LOC120097993small nucleolar RNA SNORA17172956217729562309Rat
1561689Erp29-ps1endoplasmic reticulum protein 29, pseudogene 1172962366029628679Rat
1359427Eci2enoyl-CoA delta isomerase 2172985088429886781Rat
1310224Eci3enoyl-Coenzyme A delta isomerase 3172992196229943864Rat
1307537Tex56ptestis expressed 56172992985529966578Rat
1566214Fam217afamily with sequence similarity 217, member A172997502529981455Rat
1307784Prpf4bpre-mRNA processing factor 4B172998534330020285Rat
1589719Hmgb1-ps2high mobility group box 1, pseudogene 2173004087930042758Rat
1563458Fam50bfamily with sequence similarity 50, member B173017443130193627Rat
1311307Pxdc1PX domain containing 1173027599830304971Rat
40949153LOC120097754uncharacterized LOC120097754173047881530539097Rat
620302Slc22a23solute carrier family 22, member 23173054410630709790Rat
1589955Psmg4proteasome assembly chaperone 4173071068230718035Rat
41325100LOC120097753uncharacterized LOC120097753173072935630731649Rat
7560629LOC102551220uncharacterized LOC102551220173074554230747619Rat
1309427Tubb2btubulin, beta 2B class IIb173074773430750781Rat
2320008LOC100364958hypothetical LOC100364958173078574030791208Rat
1588452Tubb2atubulin, beta 2A class IIa173079684230800713Rat
1307572Bphlbiphenyl hydrolase like173080093930837277Rat
1310158Ripk1receptor interacting serine/threonine kinase 1173083963930871824Rat
735108Serpinb6aserpin family B member 6A173087142830989703Rat
1303320Nqo2N-ribosyldihydronicotinamide:quinone reductase 2173090948230938725Rat
7723369LOC102554685uncharacterized LOC102554685173095400130970983Rat
1564786RGD1564786similar to OTTMUSP00000000636173106870231085174Rat
1561697Serpinb6eserine (or cysteine) peptidase inhibitor, clade B, member 6e173117798531187261Rat
1308725Serpinb9dserine (or cysteine) peptidase inhibitor, clade B, member 9d173128643431294091Rat
1560658Serpinb1bserine (or cysteine) peptidase inhibitor, clade B, member 1b173132013531329151Rat
1562844RGD1562844similar to serine (or cysteine) proteinase inhibitor, clade B, member 9173137819031386218Rat
1549730Serpinb9serpin family B member 9173142011831443237Rat
11429054LOC108348552uncharacterized LOC108348552173143107431436254Rat
1310452Serpinb6bserine (or cysteine) peptidase inhibitor, clade B, member 6b173145509231475460Rat
7582386LOC102555109uncharacterized LOC102555109173154067631544857Rat
41136285LOC120098022U2 spliceosomal RNA173158542531585513Rat
1306203Serpinb1aserpin family B member 1A173159069531599102Rat
628836Wrnip1WRN helicase interacting protein 1173162141031641659Rat
11425070LOC108348554uncharacterized LOC108348554173164303231654258Rat
1565323RGD1565323similar to OTTMUSP00000000621173166171331678816Rat
6494757Mylk4myosin light chain kinase family, member 4173166902831747250Rat
41226905LOC120098054U6 spliceosomal RNA173168715831687268Rat
9327804Rps27a-ps20ribosomal protein S27a, pseudogene 20173171087731711529Rat
11408958LOC108348555uncharacterized LOC108348555173176936731775965Rat
1311008GmdsGDP-mannose 4, 6-dehydratase173209531532621975Rat
1589718Foxc1forkhead box C1173263137932635361Rat
41166840LOC120097742uncharacterized LOC120097742173263615932644435Rat
41035220LOC120098017U2 spliceosomal RNA173282822332828285Rat
1589717Foxf2forkhead box F2173283573032842555Rat
41355240LOC120097779uncharacterized LOC120097779173284257832848184Rat
621572Foxq1forkhead box Q1173291274432915377Rat
41110843LOC120098004small nucleolar RNA SNORA17173312192033122044Rat
9173217LOC103694077uncharacterized LOC103694077173322894933251259Rat
6490193Rps9-ps1ribosomal protein S9, pseudogene 1173347005933470620Rat
619961Exoc2exocyst complex component 2173350628933698246Rat
1585035Hus1bHUS1 checkpoint clamp component B173353411333534943Rat
7707333Rps11-ps4ribosomal protein S11, pseudogene 4173355257233553085Rat
41001744LOC120097839uncharacterized LOC120097839173356528133567359Rat
14398591Mir6319-1microRNA mir-6319-1173358671533586841Rat
41164048LOC120097838uncharacterized LOC120097838173358677133620238Rat
1308050Irf4interferon regulatory factor 4173372180033742570Rat
41155498Atp5mf-ps4ATP synthase membrane subunit f, pseudogene 4173375613233764208Rat
1307146Dusp22dual specificity phosphatase 22173378098033831540Rat
11471267LOC108348556uncharacterized LOC108348556173393810033941366Rat
7659104Gyg1-ps1glycogenin 1, pseudogene 1173396983933972043Rat
628838Uqcrfs1ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1173397790833982478Rat
2070Agtr1aangiotensin II receptor, type 1a173417344634226892Rat
1565561Mboat1membrane bound O-acyltransferase domain containing 1173433141334445088Rat
7530502Nono-ps6non-POU domain containing, octamer-binding, pseudogene 6173439690534398376Rat
41274170LOC120097945uncharacterized LOC120097945173439871834401450Rat
41197145LOC120098016U2 spliceosomal RNA173443164734431825Rat
1561600E2f3E2F transcription factor 3173460175634679139Rat
9393815LOC103694081uncharacterized LOC103694081173466044134663290Rat
1561310RGD1561310similar to ribosomal protein L37173470562034705949Rat
1310246Cdkal1CDK5 regulatory subunit associated protein 1-like 1173471868034769614Rat
41067460LOC120098014U2 spliceosomal RNA173474368234743788Rat
41313473LOC120093069threonylcarbamoyladenosine tRNA methylthiotransferase-like173485223835271276Rat
1310246Cdkal1CDK5 regulatory subunit associated protein 1-like 1173485223835271276Rat
41300457LOC120097733uncharacterized LOC120097733173512906335142313Rat
41006362LOC120097731uncharacterized LOC120097731173520283535220004Rat
41015448LOC120098052U1 spliceosomal RNA173529101235291164Rat
41228821LOC120097975small nucleolar RNA SNORA67173529920635299336Rat
7546074LOC102548193uncharacterized LOC102548193173535019135355917Rat
6501716Ppp1r14b-ps1protein phosphatase 1, regulatory (inhibitor) subunit 14B, pseudogene173552639435527121Rat
6501250LOC100909866uncharacterized LOC100909866173556487135595211Rat
7496066LOC102548372uncharacterized LOC102548372173559614135666254Rat
1309488Sox4SRY-box transcription factor 4173566780935672515Rat
1563300RGD1563300similar to 60S ribosomal protein L29 (P23)173572225135722729Rat
41209243LOC120097905uncharacterized LOC120097905173577622635777984Rat
40969358LOC120097904uncharacterized LOC120097904173617334636179528Rat
9204614LOC103694084uncharacterized LOC103694084173622174836224983Rat
6500048LOC100910095histone H3.3-like173625931436259721Rat
2319890LOC100361579prolactin family 5, subfamily a, member 2-like173630672436309710Rat
1583904Prl5a2prolactin family 5, subfamily A, member 2173645271236459054Rat
41378522LOC120097939prolactin-5A1-like173651657936526958Rat
620120Prl5a1prolactin family 5, subfamily A, member 1173658575436593192Rat
3404Prl4a1prolactin family 4, subfamily A, member 1173674101036748952Rat
2319750Lpcat4-ps1lysophosphatidylcholine acyltransferase 4, pseudogene 1173675727836758673Rat
1562878Prl2c1prolactin family 2, subfamily C, member 1173688109936889419Rat
620121Prl2a1prolactin family 2, subfamily A, member 1173693100036937092Rat
1593943Prl7c1prolactin family 7, subfamily c, member 1173697483836982243Rat
621307Prl7d1prolactin family 7, subfamily D, member 1173698274637053328Rat
620035Prl7a3prolactin family 7, subfamily A, member 3173708616437099039Rat
1359651Prl7a4prolactin family 7, subfamily A, member 4173714852437157580Rat
11392955Rpl7a-ps15ribosomal protein L7a, pseudogene 15173715915937162427Rat
7695636Prl7a1l-ps1prolactin family 7, subfamily a, member 1 like, pseudogene173717233337184610Rat
708582Prl7b1prolactin family 7, subfamily B, member 1173720205837214739Rat
41086015LOC120098040U6 spliceosomal RNA173721241337212519Rat
41074958LOC120097848uncharacterized LOC120097848173721541137291056Rat
1582807Prl8a1prolactin family 8, subfamily a, member 1173724112837249237Rat
619862Prl8a9prolactin family 8, subfamily A, member 9173729505437300862Rat
2428Prl3d4prolactin family 3, subfamily D, member 4173732580437332641Rat
1582802Prl8a9-ps1prolactin family 8, subfamily A, member 9, pseudogene 1173737313237376797Rat
620116Prl8a4prolactin family 8, subfamily A, member 4173742996037436053Rat
708348Prl8a5prolactin family 8, subfamily A, member 5173746564137471852Rat
3406Prl8a3prolactin family 8, subfamily A, member 3173750832837514832Rat
1589715Eef1a1-ps21eukaryotic translation elongation factor 1 alpha 1, pseudogene 21173754449137546035Rat
620115Prl8a7prolactin family 8, subfamily A, member 7173755882237564724Rat
620118Prl2b1prolactin family 2, subfamily B, member 1173759115937598186Rat
2516Prl8a2prolactin family 8, subfamily A, member 2173761326337622288Rat
3405Prl6a1prolactin family 6, subfamily A, member 1173767523937680083Rat
731250Prl3a1prolactin family 3, subfamily A, member 1173769359537711959Rat
2429Prl3b1prolactin family 3, subfamily B, member 1173774368137749340Rat
69341Prl3c1prolactin family 3, subfamily C, member 1173778467437790468Rat
1582765Ppp2ca-ps1protein phosphatase 2 catalytic subunit alpha, pseudogene 1173779676737797976Rat
1582762Prl3d2prolactin family 3, subfamily D member 2173782302737829506Rat
3403Prlprolactin173785999937870062Rat
7702534Rpl19-ps10ribosomal protein L19, pseudogene 10173799638738030035Rat
1582750Tdg-ps3thymine-DNA glycosylase, pseudogene 3173814837438149739Rat
621012Hdgfl1HDGF like 1173820790638209902Rat
1589714Pkm-ps12pyruvate kinase M1/2, pseudogene 12173825670338258380Rat
41196493Prelid1-ps2PRELI domain containing 1, pseudogene 2173882156238822894Rat
7624352LOC102547708uncharacterized LOC102547708173889286938924239Rat
41130148LOC120097912uncharacterized LOC120097912173905559039074794Rat
11436884Trnap-agg16transfer RNA proline (anticodon AGG) 16173919791739197991Rat
41214770Trnap-agg58transfer RNA proline (anticodon AGG) 58173938142739381499Rat
1596974Tpi1-ps2triosephosphate isomerase 1, pseudogene 2173962332439628409Rat
1307833Nrsn1neurensin 1173980623839824550Rat
1310227Dcdc2doublecortin domain containing 2173984595240031781Rat
7652139Rpl32-ps10ribosomal protein L32, pseudogene 10174003478840035377Rat
708529Mrs2magnesium transporter MRS2174006392440087073Rat
631371Gpld1glycosylphosphatidylinositol specific phospholipase D1174008442740132035Rat
621422Aldh5a1aldehyde dehydrogenase 5 family, member A1174013233940158677Rat
1307443RGD1307443similar to mKIAA0319 protein174016251240226666Rat
1587113Rpl37-ps1ribosomal protein L37, pseudogene 1174016749940167862Rat
1560342Tdp2tyrosyl-DNA phosphodiesterase 2174022894340240337Rat
1306513Acot13acyl-CoA thioesterase 13174024037840252851Rat
6491729C17h6orf62similar to human chromosome 6 open reading frame 62174025621140267851Rat
1308137Gmnngeminin, DNA replication inhibitor174030177140310054Rat
7707229Armh2armadillo-like helical domain containing 2174031714840322869Rat
41335353LOC120098024U2 spliceosomal RNA174032110540321289Rat
1306939Ripor2RHO family interacting cell polarization regulator 2174032386740547482Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10119D17Arb4198173422548134225727Ratregion
10119D17Arb4198173422548134225872Ratregion
10119D17Arb4198173422556634225727Ratregion
10484D17Mgh11112171053898510539099Ratregion
11150D17Wox11134173787123537871375Ratregion
11151D17Wox18232173787115737871389Ratregion
11257D17Wox16171914157719141833Ratregion
33882D17Mit2125173199078431990913Ratregion
34276D17Mgh2126171533061315330732Ratregion
34588D17Mco4215171053990410540108Ratregion
35985D17Rat20163173852519738525360Ratregion
36011D17Rat17168173583708535837242Ratregion
36185D17Rat11129172491175924911896Ratregion
36225D17Rat15136173136839131368534Ratregion
36245D17Rat7138171804572718045867Ratregion
36259D17Rat19156174022395240224109Ratregion
36269D17Rat14141172743957027439721Ratregion
37210D17Rat113144172280921822809348Ratregion
37322D17Rat69159173790963437909801Ratregion
37402D17Rat78154174054004140540197Ratregion
35302D17Rat9168172301710123017269Ratregion
35354D17Rat61561799912869991442Ratregion
36910D17Rat8168172178284121783009Ratregion
37606D17Rat81239172105593221056179Ratregion
37780D17Rat93206171330887813309080Ratregion
37934D17Rat72229172139491721395159Ratregion
36572D17Rat10141172502197625022117Ratregion
34827D17Rat12158172702794927028127Ratregion
35114D17Rat92131171060836710608498Ratregion
35637D17Rat13160172783515427835317Ratregion
35697D17Rat16153173455084334551001Ratregion
35935D17Rat55173173935280339352968Ratregion
39708D17Rat135200171951181819512021Ratregion
38138D17Rat66208171608644516086645Ratregion
38348D17Rat59170172188150821881669Ratregion
40514D17Rat134140171327115413271296Ratregion
40658D17Rat117212172498265224982845Ratregion
38416D17Rat70200171528186615282062Ratregion
38498D17Rat86249171245103112451284Ratregion
38590D17Rat77217173319889733199113Ratregion
38698D17Rat75268171678642716786706Ratregion
38706D17Rat84138172365318423653323Ratregion
38772D17Rat102220172129303921293263Ratregion
38786D17Rat83136172678017926780311Ratregion
40000D17Rat115220172197526821975515Ratregion
38992D17Rat61221171398677313986994Ratregion
39346D17Rat67148172908699329087143Ratregion
42032D17Arb1125172614356426143688Ratregion
42034D17Arb10230173787165137871885Ratregion
42040D17Arb14310173787115737871504Ratregion
41216D17Rat116155172444207724442230Ratregion
43094D17Rat147202173889051638890724Ratregion
43078D17Rat184247171234533112345554Ratregion
43080D17Rat157206171275609212756301Ratregion
43082D17Rat142207171631690816317111Ratregion
43083D17Rat159213171393147513931681Ratregion
43084D17Rat161200172521500025215194Ratregion
43086D17Rat163136172944593829446060Ratregion
43088D17Rat162200173164329431643498Ratregion
43089D17Rat181170173189601031896169Ratregion
42415D17Rat178203173260893032609135Ratregion
42416D17Rat179200173596462835964824Ratregion
40920D17Rat112221171502195215022177Ratregion
40982D17Rat108110171084318510843291Ratregion
41028D17Rat110136171608546816085604Ratregion
41074D17Rat114113171873510718735222Ratregion
41652D17Rat155144173213163632131780Ratregion
45466D17Got52158173623947236239629Ratregion
45467D17Got51292173607302736073321Ratregion
45469D17Got45184174020026640200450Ratregion
45470D17Got54270173934198939342259Ratregion
45471D17Got53292173819149338191785Ratregion
60139D17Got114108173074524330745351Ratregion
60146D17Got28139171942032019420459Ratregion
60147D17Got36209172620570926205918Ratregion
60148D17Got46114174051148040511594Ratregion
45424D17Got13133171209513512095268Ratregion
45428D17Got15278171422074114221019Ratregion
45429D17Got21224171683815316838377Ratregion
45431D17Got16167171754877917548946Ratregion
45432D17Got18168171647544116475609Ratregion
45433D17Got20257171607149116071747Ratregion
45434D17Got17238171646414616464386Ratregion
45435D17Got22163171685549016855653Ratregion
45436D17Got24192171844564418445836Ratregion
45437D17Got23116171844535118445468Ratregion
45438D17Got25177171861162018611799Ratregion
45439D17Got26204171864372918643933Ratregion
45440D17Got27280171933699719337277Ratregion
45443D17Got29178172066577920665957Ratregion
45444D17Got30176172372582923726005Ratregion
45445D17Got33194172498701824987212Ratregion
45446D17Got32252172490749624907747Ratregion
45448D17Got34137172718958227189719Ratregion
45449D17Got42245172715841227158657Ratregion
45450D17Wox3100172738980227389946Ratregion
45451D17Got35147172614355526143702Ratregion
45453D17Got3894172863483728634931Ratregion
45454D17Got39152172914629929146451Ratregion
45455D17Got43124173146318331463308Ratregion
45457D17Got37111172926131229261423Ratregion
45458D17Got41137172792160027921737Ratregion
45459D17Got44234173178890631789137Ratregion
45461D17Got116152173282175632821908Ratregion
45462D17Got48288173513821835138503Ratregion
45463D17Got50212173574103435741246Ratregion
45464D17Got49203173614652836146731Ratregion
45465D17Got47175173568395135684123Ratregion
625793D17Got118238174029949140299729Ratregion
61301D17Mco10194172308036823080567Ratregion
62457D17Uia3132172240536422405496Ratregion
66511D17Mco1165172339312123393334Ratregion
66514D17Mco2272172979905629799326Ratregion
66518D17Mco6206173423066934230882Ratregion
629610D17Hmgc1214173787116137871375Ratregion
67276D17Arb9289173349259533492884Ratregion
1556753D17Chm55393173446144534461838Ratregion
1630424D17Wox26221173367748733677708Ratregion
1631751D17Wox34295173422727634227609Ratregion
1632124D17Got205107172293910422939206Ratregion
1627009D17Mco9262173422703634227298Ratregion
1627271D17Mco12259171283874212839001Ratregion
1627582D17Got228139173265646032656599Ratregion
1627804D17Got202195171678330616783496Ratregion
1629166D17Wox23226171054339110543617Ratregion
1641631D17Got203113171738019917380307Ratregion
1633512D17Got204166171998570619985872Ratregion
1640215D17Got233244172713682227137065Ratregion
1635731D17Got201148171393146213931610Ratregion
1635894D17Got200196171677008316770281Ratregion
1637309D17Wox24173774996537750194Ratregion
1638394D17Got206162172481009524810257Ratregion
1632516D17Got219103173053127830531381Ratregion
7192472Agtr1a691173417588634176577Ratregion
7192488Idb4271171639114416391760Ratregion
7206288Jarid2224171979727419797498Ratregion
7206418RAN918171234719112348109Ratregion
7206458Ror2950171214691112147861Ratregion
7206508UniSTS:546781115171337793113378527Ratregion
5035751STS-N25875140173263143532631575Ratregion
5036015PMC85656P1110173460170734601817Ratregion
5036023PMC86941P1356171337706413377420Ratregion
5038802RH127341216171743161717431835Ratregion
5036175D13Cwr18268173253234032532608Ratregion
5036177D13Cwr27109173268646132686570Ratregion
5038954RH127428190171802454918024739Ratregion
5039258RH127603195171747977917479974Ratregion
5036418Mx1170171260987112610041Ratregion
5036569AU048462155173579643935796595Ratregion
5039068RH127494204173142023731420441Ratregion
5036775AU049163261173552974735530008Ratregion
5037113D6S1932180172998855629988736Ratregion
5037177RH91165179171525981815259997Ratregion
5035711TFAP2A280172403172324032003Ratregion
5033889RH140503247174025950440259751Ratregion
5025994RH130497180171766250817662688Ratregion
5028631RH125640239173718431537184554Ratregion
7206174Tubb2b188173074778030748776Ratregion
5031502AU048113178172479270424792877Ratregion
5034099RH141358212172346770023467912Ratregion
5028893RH142724227173602537836025605Ratregion
5031542AU047986165171944646019446625Ratregion
5031578AU047860140173074839430748534Ratregion
5034215RH141803211171499060414990815Ratregion
5034229RH141853210171802747218027682Ratregion
5034281RH142048198172131005221310251Ratregion
5026280RH131606190173378102033781210Ratregion
5026288RH131636190172088733920887529Ratregion
5026290RH131644196173511499835115194Ratregion
5026296RH131669184171802677918026963Ratregion
5026296RH131669184171802677918026963Ratregion
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5050096RH133860195171791333017913525Ratregion
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5052521RH118352170174025941540259585Ratregion
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5053939RH142938225173000872030008945Ratregion
5054507RH143264234173291333132913565Ratregion
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5050730RH134225213172350140723501620Ratregion
5050742RH134232192171561092315611115Ratregion
5050772RH134249151173030472030304871Ratregion
5051753RH94639185172631857626318761Ratregion
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5085427BQ202174158172115823521158393Ratregion
5080726RH141746194171802377218023966Ratregion
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5080742RH141755184171748414517484329Ratregion
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5084680AI171242111172154816321548274Ratregion
5083005BF390609164173080565930805823Ratregion
5086173BM386176176172707861527078791Ratregion
5081082RH141954197174008290440083101Ratregion
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5083091BI275110192174008672640086918Ratregion
5086640BM387323189172731033927310528Ratregion
5081497BF420045212172033347520333701Ratregion
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5083813AA891724230171525994915260179Ratregion
5083831AI230799201172153287921533080Ratregion
5503484CLTB_4592613171001880310019416Ratregion
5507602Bmp6134172646847326468607Ratregion
5503925Idb41468171639049416391962Ratregion
5503910UniSTS:256385641173417593634176577Ratregion
5507636Rnasep1342172895511928956732Ratregion
5503724CPLX2_9184596171022316710223764Ratregion
5504889ha3011111172461090724611018Ratregion
5505333Barx1965171599077515991740Ratregion
5505782UniSTS:493122831173353411233534943Ratregion
5505986UniSTS:49674591173566961235669703Ratregion
5506201Cks2378172427144124271819Ratregion
5506238Satt227926172158128621582212Ratregion
5506374UniSTS:479010651171500614015006791Ratregion
5506817G46247231171315345613153687Ratregion
5506879G47094237171442961714429854Ratregion
5507017fj85b10.x1101171380339813803499Ratregion
5507303fc02h02.x1396171583556715835963Ratregion
5500121UniSTS:237015200171337692913377128Ratregion
5500123UniSTS:237019240171229538512295625Ratregion
5501087PMC133998P70171639114616391956Ratregion
5501572RH79983202173567138435671586Ratregion
5501367G06234261171525979415260055Ratregion
5501748MARC_10647-10648:1000474126:1491173567195835672449Ratregion
5502072MARC_26445-26446:1030655521:1133173074912330749576Ratregion
5502072MARC_26445-26446:1030655521:1133173079868530799569Ratregion
5505279Serpinb6c60173097800030978060Ratregion
5506765G45205133172284393722844072Ratregion
Position Markers

Flank 1: (D17Rat6)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2179,991,286 - 9,991,442 (+)MAPPER
Rnor_6.01710,529,709 - 10,529,864NCBI
Rnor_5.01712,655,344 - 12,655,499UniSTS
RGSC_v3.41716,053,169 - 16,053,563RGD
RGSC_v3.41716,053,310 - 16,053,465UniSTS
RGSC_v3.11716,053,310 - 16,053,465RGD
Celera1710,064,533 - 10,064,672UniSTS
RH 3.4 Map1792.4UniSTS
RH 3.4 Map1792.4RGD
RH 2.0 Map1757.0RGD
SHRSP x BN Map178.26RGD
FHH x ACI Map174.49RGD
Peak: (D17Rat11)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21724,911,759 - 24,911,896 (+)MAPPER
Rnor_6.01725,536,932 - 25,537,068NCBI
Rnor_5.01727,469,012 - 27,469,148UniSTS
RGSC_v3.41730,929,494 - 30,929,630UniSTS
RGSC_v3.41730,929,493 - 30,929,630RGD
RGSC_v3.11730,932,335 - 30,932,471RGD
Celera1724,559,377 - 24,559,513UniSTS
RH 3.4 Map17295.7RGD
RH 3.4 Map17295.7UniSTS
RH 2.0 Map17205.9RGD
SHRSP x BN Map1719.5499RGD
Flank 2: (D17Rat78)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21740,540,041 - 40,540,197 (+)MAPPER
Rnor_6.01742,541,872 - 42,542,027NCBI
Rnor_5.01744,407,867 - 44,408,022UniSTS
RGSC_v3.41747,628,673 - 47,628,829RGD
RGSC_v3.41747,628,674 - 47,628,829UniSTS
RGSC_v3.11747,631,514 - 47,631,670RGD
Celera1740,175,973 - 40,176,128UniSTS
RH 2.0 Map17307.7RGD
SHRSP x BN Map1730.3699RGD
FHH x ACI Map1734.46RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
9590316Scort21Serum corticosterone level QTL 214.750.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)17122871563Rat
10401807Kidm52Kidney mass QTL 52kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)17131701463Rat
70184BpQTLcluster14Blood pressure QTL cluster 143.38arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)17131990913Rat
631207Niddm41Non-insulin dependent diabetes mellitus QTL 41blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)17137830672Rat
1354658Spl8Serum phospholipid level QTL 83.8blood VLDL phospholipid amount (VT:0010507)blood very low density lipoprotein phospholipid level (CMO:0001571)17160781592Rat
1354581Bp247Blood pressure QTL 2474.5arterial blood pressure trait (VT:2000000)pulse pressure (CMO:0000292)17169599340Rat
1354662Rf49Renal function QTL 492.9blood creatinine amount (VT:0005328)plasma creatinine level (CMO:0000537)17169599340Rat
1641902Colcr7Colorectal carcinoma resistance QTL 73.350.0044intestine integrity trait (VT:0010554)benign colorectal tumor surface area measurement (CMO:0001799)17211514921881669Rat
1300123Bp194Blood pressure QTL 1942.82arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)17211514934551001Rat
631499Stl1Serum triglyceride level QTL 13.6blood triglyceride amount (VT:0002644)blood triglyceride level (CMO:0000118)17327139827389946Rat
2324619Coatc4Coat color QTL 40.001coat/hair pigmentation trait (VT:0010463)pigmented coat/hair area to total coat/hair area ratio (CMO:0001810)17429913021293263Rat
2324619Coatc4Coat color QTL 40.001coat/hair pigmentation trait (VT:0010463)pigmented dorsal coat/hair area to total dorsal coat/hair area ratio (CMO:0001811)17429913021293263Rat
1354613Kidm14Kidney mass QTL 146.2kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)17429913035837242Rat
1354596Bw32Body weight QTL 324.5body mass (VT:0001259)body weight (CMO:0000012)17429913060781592Rat
1354630Cm34Cardiac mass QTL 348.7heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)17429913069599340Rat
1354638Insul1Insulin level QTL 14.8blood insulin amount (VT:0001560)plasma insulin level (CMO:0000342)17429913069599340Rat
1354651Lmblg2Limb length QTL 26tibia length (VT:0004357)tibia length (CMO:0000450)17429913069599340Rat
2293648Bmd31Bone mineral density QTL 314.50.0001femur size trait (VT:1000369)femoral neck cortical cross-sectional area (CMO:0001702)17435448727028127Rat
2293664Bmd28Bone mineral density QTL 285.10.0001femur mineral mass (VT:0010011)trabecular volumetric bone mineral density (CMO:0001729)17435448727028127Rat
2303627Vencon8Ventilatory control QTL 80.001respiration trait (VT:0001943)tidal volume (CMO:0000222)17452803849528038Rat
10054088Scort28Serum corticosterone level QTL 282.040.0102blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)17452803849528038Rat
1581553Pur14Proteinuria QTL 145.30.0001urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)17797996816317111Rat
2303561Bw91Body weight QTL 912body mass (VT:0001259)body weight (CMO:0000012)17886846253868462Rat
1582199Insul5Insulin level QTL 53.40.0119blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)17920136523653323Rat
1582208Kidm32Kidney mass QTL 323.90.0018kidney mass (VT:0002707)both kidneys wet weight (CMO:0000085)17920136523653323Rat
1582224Epfw4Epididymal fat weight QTL 43.50.0058epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)17920136523653323Rat
1582225Bw67Body weight QTL 676.20.0001body mass (VT:0001259)body weight (CMO:0000012)17920136523653323Rat
1582226Bw64Body weight QTL 644.20.0017body mass (VT:0001259)body weight (CMO:0000012)17920136523653323Rat
1582241Bw70Body weight QTL 704.60.0003body mass (VT:0001259)body weight (CMO:0000012)17920136523653323Rat
1582245Bw73Body weight QTL 734.60.0004body mass (VT:0001259)body weight (CMO:0000012)17920136523653323Rat
1582258Bw76Body weight QTL 764.60.0005body mass (VT:0001259)body weight (CMO:0000012)17920136523653323Rat
2300002Iddm36Insulin dependent diabetes mellitus QTL 361.98blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)17999128640540197Rat
1549900Iddm20Insulin dependent diabetes mellitus QTL 203.7pancreas integrity trait (VT:0010560)percentage of study population developing diabetes mellitus during a period of time (CMO:0001114)171398677321975515Rat
1331720Rf43Renal function QTL 432.881kidney blood vessel physiology trait (VT:0100012)absolute change in renal vascular resistance (CMO:0001900)171533061323017269Rat
1331765Hrtrt15Heart rate QTL 154.094heart pumping trait (VT:2000009)heart rate (CMO:0000002)171533061355836425Rat
1354640Scl32Serum cholesterol level QTL 325.4blood HDL cholesterol amount (VT:0000184)blood high density lipoprotein cholesterol level (CMO:0000052)171578159260781592Rat
1354659Scl68Serum cholesterol level QTL 683.9blood VLDL cholesterol amount (VT:0005144)blood very low density lipoprotein cholesterol level (CMO:0000648)171578159260781592Rat
7394837Memor18Memory QTL 18exploratory behavior trait (VT:0010471)measurement of voluntary locomotion into, out of or within a discrete space in an experimental apparatus (CMO:0000957)171864018263640182Rat
1354628Stl13Serum triglyceride level QTL 133.8blood triglyceride amount (VT:0002644)blood triglyceride level (CMO:0000118)172129303960781592Rat
70157Niddm32Non-insulin dependent diabetes mellitus QTL 324.34blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)172245492450909196Rat
61394Bp8Blood pressure QTL 82.2arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)172308056759555013Rat
7488966Bp370Blood pressure QTL 3700.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)172365318457246843Rat
12903978Cm118Cardiac mass QTL 1180.001heart mass (VT:0007028)heart wet weight to body weight ratio (CMO:0002408)172365318468653184Rat
12903979Cm119Cardiac mass QTL 1190.001heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)172365318468653184Rat
12903980Cm120Cardiac mass QTL 1200.002heart right ventricle mass (VT:0007033)heart right ventricle weight to body weight ratio (CMO:0000914)172365318468653184Rat
12903981Am17Aortic mass QTL 170.001aorta mass (VT:0002845)aorta weight to aorta length to body weight ratio (CMO:0002722)172365318468653184Rat
1559055Bp278Blood pressure QTL 2780.04arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)172365318468653184Rat
12903982Kidm70Kidney mass QTL 700.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)172365318470974005Rat
1354619Bp242Blood pressure QTL 2426.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)172459934069599340Rat
4889891Eae32Experimental allergic encephalomyelitis QTL 324.80.0002nervous system integrity trait (VT:0010566)experimental autoimmune encephalomyelitis severity score (CMO:0001419)172702794936146731Rat
1581512Cm55Cardiac mass QTL 552.80.05heart left ventricle mass (VT:0007031)heart left ventricle weight to body weight ratio (CMO:0000530)172702794956836890Rat
4889955Bss93Bone structure and strength QTL 934.4tibia size trait (VT:0100001)tibia cortical bone volume to tibia total bone volume ratio (CMO:0001727)172702794960463643Rat
2302377Scl61Serum cholesterol level QTL 614.36blood HDL cholesterol amount (VT:0000184)serum high density lipoprotein cholesterol level (CMO:0000361)172738994653481766Rat
8552928Pigfal9Plasma insulin-like growth factor 1 level QTL 99blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)172840914773409147Rat
9590107Sffal7Serum free fatty acids level QTL 74.810.001blood free fatty acid amount (VT:0001553)plasma free fatty acids level (CMO:0000546)172840914773409147Rat
10450503Bp386Blood pressure QTL 3860.28arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)173136839162109574Rat
2324621Coatc5Coat color QTL 5coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)173136839173951021Rat
2313854Bp343Blood pressure QTL 3433.9life span trait (VT:0005372)age at time of death (CMO:0001193)173199078450909196Rat
724549Niddm56Non-insulin dependent diabetes mellitus QTL 560.03blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)173199078476990784Rat
1354663Bvd5Brain ventricular dilatation QTL 53.510.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)173199078481292925Rat
1300148Bp192Blood pressure QTL 1923.47arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)173455084373951021Rat
724528Uae4Urinary albumin excretion QTL 44.90.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)173583708569599340Rat
2301412Kidm40Kidney mass QTL 400.001kidney mass (VT:0002707)both kidneys wet weight to body weight ratio (CMO:0000340)173747984782479847Rat
2317054Aia12Adjuvant induced arthritis QTL 124.24joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)173828150983281509Rat
2317060Aia26Adjuvant induced arthritis QTL 263.22joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)173828150983281509Rat
1598871Memor5Memory QTL 55.3exploratory behavior trait (VT:0010471)total horizontal distance resulting from voluntary locomotion in an experimental apparatus (CMO:0001443)174054004180387013Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_general number of animals used: 574 animals which were negative for glycosuria until 165 days 2303106
qtl_general software used: R/QTL and QTL Cartographer 2303106
qtl_general susceptible allele comes from the BBDP 2303106