Alcrsp10 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Alcrsp10 (Alcohol response QTL 10) Rattus norvegicus

Symbol: Alcrsp10
Name: Alcohol response QTL 10
RGD ID: 1641927
Previously known as: Blood ethanol concentration 1; BEC1
Trait: alcohol metabolism trait   (VT:0015089)    
Measurement Type: blood ethanol level   (CMO:0000535)    
LOD Score: Likelihood Ratio: 13.1
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2118,436,674 - 53,436,674RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0119,351,274 - 54,351,274RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01112,960,007 - 57,960,007RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4119,165,656 - 54,165,656RGD_MAPPER_PIPELINERGSC3.4
RGSC_v3.1119,204,713 - 54,204,713RGD
Cross Type: intercross
Strains Crossed: LAS1 HAS1 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait

Rat Strain
HAS1  (IEA)
LAS1  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Quantitative trait Loci mapping for ethanol sensitivity and neurotensin receptor density in an F2 intercross derived from inbred high and low alcohol sensitivity selectively bred rat lines. Radcliffe RA, etal., Alcohol Clin Exp Res 2004 Dec;28(12):1796-804.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
41370750LOC120095779small nucleolar RNA U131185147618514863Rat
1586206Poglut2-ps1protein O-glucosyltransferase 2, pseudogene 11185488328550826Rat
1586207Set-ps11Set nuclear proto-oncogene, pseudogene 111185775928578429Rat
41053307LOC120095794U2 spliceosomal RNA1186682168668292Rat
2319158Eif4e-ps10eukaryotic translation initiation factor 4E, pseudogene 101186997538700439Rat
1309968Gbe11,4-alpha-glucan branching enzyme 11187348069000226Rat
41332035LOC120095590uncharacterized LOC1200955901188701068876944Rat
7669742LOC102549549uncharacterized LOC1025495491188899268905080Rat
41100346Snord22small nucleolar RNA, C/D box 221190977999097923Rat
7708718LOC102549956uncharacterized LOC1025499561191186379123382Rat
7527339LOC102550021uncharacterized LOC1025500211192152169229868Rat
1592954Chmp6-ps1charged multivesicular body protein 6, pseudogene 11197696019770333Rat
40983549LOC120095811U6 spliceosomal RNA1198037999803905Rat
61941Robo1roundabout guidance receptor 1111058086311621675Rat
11406618LOC108352379uncharacterized LOC108352379111106235411076277Rat
7696444LOC102551469uncharacterized LOC102551469111109946211136678Rat
41174631Trnav-aac31transfer RNA valine (anticodon AAC) 31111162468911624770Rat
41281293LOC120095557uncharacterized LOC120095557111165004211661186Rat
41394409LOC120095755small nucleolar RNA SNORA17111175600511756134Rat
41140540LOC120095742small nucleolar RNA SNORA48111183929611839427Rat
620167Robo2roundabout guidance receptor 2111252894914096726Rat
41205137LOC120095537uncharacterized LOC120095537111310651913110886Rat
41303579LOC120095760small nucleolar RNA SNORA17111322574413225871Rat
40981328Trnaa-agc31transfer RNA alanine (anticodon AGC) 31111355288213552953Rat
1589452Tent5b-ps1terminal nucleotidyltransferase 5B, pseudogene 1111372510613728086Rat
1310162Lipilipase I111418932314228992Rat
40969584LOC120095819U6 spliceosomal RNA111419558714195692Rat
1305195Rbm11RNA binding motif protein 11111423485114244092Rat
2319676Snrpe-ps3small nuclear ribonucleoprotein polypeptide E, pseudogene 3111436301514363571Rat
41327136LOC120095809U6 spliceosomal RNA111437012814370234Rat
3775Hspa13heat shock protein family A (Hsp70) member 13111437566914389853Rat
620926Samsn1SAM domain, SH3 domain and nuclear localization signals, 1111448452314534900Rat
41044926LOC120095752small nucleolar RNA SNORA17111475623914756370Rat
40982247LOC120095592uncharacterized LOC120095592111478952014811653Rat
11381419LOC108352292uncharacterized LOC108352292111481178414830208Rat
1311850Nrip1nuclear receptor interacting protein 1111489584314979490Rat
40959210LOC120095593uncharacterized LOC120095593111499880415011347Rat
40937056Rpl7-ps9ribosomal protein L7, pseudogene 9111535176315354240Rat
7613925LOC102556241uncharacterized LOC102556241111537164215380095Rat
7690081LOC102548078uncharacterized LOC102548078111554318415560750Rat
40997737LOC120095594uncharacterized LOC120095594111559600015602092Rat
1309003Usp25ubiquitin specific peptidase 25111560365415711356Rat
9119122LOC103693508uncharacterized LOC103693508111587174916295079Rat
41187853LOC120095539uncharacterized LOC120095539111606394616069167Rat
2325580Mir99amicroRNA 99a111620044316200523Rat
2325435Mirlet7c1microRNA let-7c-1111620116316201256Rat
4888572Mir3588microRNA 3588111624561116245716Rat
2325575Mir125b2microRNA 125b-2111624562016245707Rat
1586139Sord-ps2sorbitol dehydrogenase, pseudogene 2111639227316394420Rat
11369037LOC108352294uncharacterized LOC108352294111641274716425621Rat
41319938LOC120095805U6 spliceosomal RNA111665509016655196Rat
7521170LOC102546782uncharacterized LOC102546782111682631516831065Rat
40966767LOC120095757small nucleolar RNA SNORA17111691977616919914Rat
41087675LOC120095595uncharacterized LOC120095595111693245316939866Rat
619794CxadrCXADR, Ig-like cell adhesion molecule111698286417030078Rat
2226Btg3BTG anti-proliferation factor 3111703015617046069Rat
41011570LOC120095596uncharacterized LOC120095596111710390017113835Rat
1563888C11h21orf91similar to human chromosome 21 open reading frame 91111722912917262307Rat
40952789LOC120095597uncharacterized LOC120095597111742449717510872Rat
1597043Hspa8-ps31heat shock protein family A (Hsp70) member 8, pseudogene 31111746669117468736Rat
1309885Chodlchondrolectin111765413717676450Rat
1311046Tmprss15transmembrane serine protease 15111767774117802255Rat
1585829Rpl27l3ribosomal protein L27 like 3111797005117970433Rat
1333570Or5b129-ps1olfactory receptor family 5 subfamily B member 129, pseudogene 1111801405118014958Rat
41156026LOC12009558440S ribosomal protein S18-like111847231118473770Rat
9135017LOC10369351040S ribosomal protein S6 pseudogene111874827418748918Rat
41256742LOC120095558uncharacterized LOC120095558111876089718767970Rat
41129591LOC120095753small nucleolar RNA SNORA17111887893618879060Rat
41203619LOC120095598uncharacterized LOC120095598111887958818880497Rat
41115113LOC120095718U6 spliceosomal RNA111957838019578477Rat
1597984Pcbp2-ps8poly(rC) binding protein 2, pseudogene 8111969395819697409Rat
1303131Ncam2neural cell adhesion molecule 2112010497420592168Rat
6499722Tmem258-ps5transmembrane protein 258, pseudogene 5112060280420603028Rat
1586138Pes1-ps1pescadillo ribosomal biogenesis factor 1, pseudogene 1112153064721532896Rat
1583562LOC681129triosephosphate isomerase 1 pseudogene112204586522046777Rat
7499203LOC102551587uncharacterized LOC102551587112209068322134713Rat
1583549Rpl32-ps15ribosomal protein L32, pseudogene 15112229514722295534Rat
41054117LOC120095600uncharacterized LOC120095600112246683022530379Rat
1587389Eno1-ps22enolase 1, pseudogene 22112253904522541205Rat
11400799LOC108352387H/ACA ribonucleoprotein complex subunit 3 pseudogene112257400922574422Rat
41257749LOC120095802U4 spliceosomal RNA112287406422874217Rat
40969201LOC120095601uncharacterized LOC120095601112357849723607404Rat
41401168LOC120095602uncharacterized LOC120095602112362682523639139Rat
2324553Tmem126a-ps3transmembrane protein 126A, pseudogene 3112366809823671133Rat
10045371Mir155hgMir155 host gene112377346823775697Rat
7489038Mir155microRNA 155112377465423774718Rat
1591507Mrpl39mitochondrial ribosomal protein L39112377965523795146Rat
41165047LOC120095730small nucleolar RNA SNORA70112379736523797457Rat
1561692Jam2junctional adhesion molecule 2112383082023880071Rat
621376Atp5pfATP synthase peripheral stalk subunit F6112388159423889581Rat
1310802GabpaGA binding protein transcription factor subunit alpha112388858623917612Rat
2139Appamyloid beta precursor protein112401977424236584Rat
1359578Cyyr1cysteine and tyrosine rich 1112455762024664007Rat
41061186LOC120095815U6 spliceosomal RNA112466935824669464Rat
1598007Naca-ps1nascent polypeptide associated complex subunit alpha, pseudogene 1112471836724719061Rat
621241Adamts1ADAM metallopeptidase with thrombospondin type 1 motif, 1112493222724941068Rat
735196Adamts5ADAM metallopeptidase with thrombospondin type 1 motif, 5112500062725047205Rat
7712322LOC102552725uncharacterized LOC102552725112504870325055640Rat
41397046LOC120095790U2 spliceosomal RNA112558462725584708Rat
7630190LOC102552813uncharacterized LOC102552813112560803025631481Rat
1586208Paics-ps8phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase, pseudogene 8112567107225672328Rat
41011007Bnip3-ps6BCL2 interacting protein 3, pseudogene 6112568033125683688Rat
41265339LOC120095764small nucleolar RNA SNORA17112603144226031570Rat
1597041Ns5atp4-ps2NS5A transactivated protein 4, pseudogene 2112616231626163298Rat
41273276LOC120095559uncharacterized LOC120095559112648711726493500Rat
2324078Atp1b3-ps2ATPase Na+/K+ transporting subunit beta 3, pseudogene 2112649743626498542Rat
41169747Srsf3-ps7serine and arginine rich splicing factor 3, pseudogene 7112655787626558364Rat
1311843N6amt1N-6 adenine-specific DNA methyltransferase 1112658475026597790Rat
1311238Ltn1listerin E3 ubiquitin protein ligase 1112660390326660871Rat
1305062Rwdd2bRWD domain containing 2B112666587726677986Rat
1307192Usp16ubiquitin specific peptidase 16112668135926711313Rat
1305452Cct8chaperonin containing TCP1 subunit 8112671037026722079Rat
41212102LOC120095748small nucleolar RNA SNORA17112675230626752441Rat
41053188Rpl32-ps14ribosomal protein L32, pseudogene 14112676245126764839Rat
9180291LOC103693536developmental pluripotency-associated protein 5A pseudogene112678469426785052Rat
1359474Map3k7clMAP3K7 C-terminal like112679104426835605Rat
6490462Pbdc1-ps3polysaccharide biosynthesis domain containing 1, pseudogene 3112685894726862536Rat
7698912LOC102555219uncharacterized LOC102555219112687073426889416Rat
7749511LOC102554346uncharacterized LOC102554346112693627926939440Rat
1306693Bach1BTB domain and CNC homolog 1112693942926974876Rat
41246429Ndufa7-ps1NADH:ubiquinone oxidoreductase subunit A7, pseudogene 1112694604626947410Rat
41235348LOC120095766small nucleolar RNA SNORA17112700708227007199Rat
2732Grik1glutamate ionotropic receptor kainate type subunit 1112716973927571131Rat
7624393LOC102549158sorting nexin-1-like112741276927414504Rat
11450786LOC108352301uncharacterized LOC108352301112744880627541899Rat
1307462Cldn17claudin 17112782745427828630Rat
1586137Kansl2-ps1KAT8 regulatory NSL complex subunit 2, pseudogene 1112784051627842398Rat
1308575Cldn8claudin 8112787585727878106Rat
2320810Krtap24-1keratin associated protein 24-1112793201527936047Rat
6488151LOC100912272keratin-associated protein 26-1-like112794742927949456Rat
1589096Krtap26-1keratin associated protein 26-1112796503327965728Rat
11409068LOC108352303uncharacterized LOC108352303112797576928012337Rat
2320648Krtap27-1keratin associated protein 27-1112798087527982002Rat
2324754Krtap13-1l1keratin associated protein 13-1 like 1112802354828024726Rat
2323555Krtap13-1keratin associated protein 13-1112804319428044666Rat
2323404LOC100363236keratin associated protein 13-like112806852928069300Rat
2323353Krtap13keratin associated protein 13112807483328075375Rat
1311682Krtap14lkeratin associated protein 14 like112808572928086516Rat
1559597Krtap13-2keratin associated protein 13-2112808968128090825Rat
9425151LOC103693537keratin-associated protein 13-1-like112811238628112985Rat
1562771Krtap13-2l1keratin associated protein 13-2 like 1112812162528122158Rat
1564302Krtap14keratin associated protein 14112812666028127502Rat
1311088Krtap15-1keratin associated protein 15-1112813034528131169Rat
1583716Rps20-ps4ribosomal protein S20, pseudogene 4112816038028160785Rat
7590870LOC102550973keratin-associated protein 19-4-like112818292828183185Rat
1595144Krtap19-5keratin associated protein 19-5112819161628191816Rat
1588263Krtap16-5keratin associated protein 16-5112824921228249796Rat
7616512LOC102550708keratin-associated protein 19-3-like112826282528263070Rat
7729737Krtap20-1keratin associated protein 20-1112835844128358599Rat
7595009Krtap20-2l1keratin associated protein 20-2-like 1112836373028363909Rat
7637203LOC102551003keratin-associated protein 20-2-like112837686428377010Rat
7505083LOC102551105keratin-associated protein 20-2-like112838299228383156Rat
7558711LOC102551168keratin-associated protein 20-2-like112839178728391981Rat
41369743LOC120095791U2 spliceosomal RNA112839319428393344Rat
7588271LOC102551201keratin-associated protein 20-2-like112839958728399766Rat
7607006LOC102551304keratin-associated protein 20-2-like112840632228406507Rat
7742893LOC102551406keratin-associated protein 20-2-like112841230728412508Rat
7748348LOC102551497keratin-associated protein 20-2-like112841918928419365Rat
2323841Krtap20-2l2keratin associated protein 20-2-like 2112842417128430570Rat
7665279LOC102551679keratin-associated protein 20-2-like112843724928437840Rat
7700217LOC102551771keratin-associated protein 20-2-like112843807328443053Rat
7727214LOC102551852keratin-associated protein 20-2-like112844710928450346Rat
7547632LOC102551947keratin-associated protein 20-2-like112845807128461171Rat
7735531LOC102552046keratin-associated protein 20-2-like112846260328463655Rat
7613053LOC102552137keratin-associated protein 20-2-like112847308428473819Rat
41166462LOC120095562keratin-associated protein 20-2-like112847578428476246Rat
7688666LOC102552244keratin-associated protein 20-2-like112848154528481940Rat
41389793LOC120095563keratin-associated protein 20-2-like112851904628519204Rat
9102091Krtap21-1lkeratin-associated protein 21-1-like112861686128627513Rat
2323315Krtap8-1keratin associated protein 8-1112871779828718355Rat
1560879Krtap7-1keratin associated protein 7-1112874038728741023Rat
11381215LOC108352304uncharacterized LOC108352304112879003128991551Rat
2323257Krtap11-1keratin associated protein 11-1112880994028810944Rat
1592576Morf4l1-ps8mortality factor 4 like 1, pseudogene 8112890186928904658Rat
1307455Tiam1TIAM Rac1 associated GEF 1112903134729380153Rat
7687075LOC102552925uncharacterized LOC102552925112934660329352183Rat
3731Sod1superoxide dismutase 1112945667329462249Rat
727896Scaf4SR-related CTD-associated factor 4112946047929521153Rat
41353378LOC120095710U6 spliceosomal RNA112952750629527608Rat
11414184Cebpzos-ps1CEBPZ opposite strand, pseudogene 1112953031029530538Rat
41277807LOC120095607uncharacterized LOC120095607112957770329584399Rat
1565091Hunkhormonally upregulated Neu-associated kinase112964112229758392Rat
9389452LOC103693516uncharacterized LOC103693516112990905429912650Rat
41324871LOC120095608uncharacterized LOC120095608112992457529928452Rat
1310778Mis18aMIS18 kinetochore protein A112996803029981058Rat
1310648Mrapmelanocortin 2 receptor accessory protein112999197430003024Rat
1304621Urb1URB1 ribosome biogenesis homolog113000453930065315Rat
1307569Eva1ceva-1 homolog C113008951030163596Rat
41031335LOC120095736small nucleolar RNA SNORA2/SNORA34 family113018143130181563Rat
1306954Cfap298cilia and flagella associated protein 298113018191630191302Rat
69434Synj1synaptojanin 1113019262930269447Rat
1584739Paxbp1PAX3 and PAX7 binding protein 1113027203730301504Rat
1562726Epcipexosomal polycystin 1 interacting protein113030784230325829Rat
7532083LOC102554018uncharacterized LOC102554018113035103530356802Rat
11363569LOC108352305uncharacterized LOC108352305113037072730377409Rat
40971770LOC120095612uncharacterized LOC120095612113041930130454486Rat
1307098Olig2oligodendrocyte transcription factor 2113047551030478886Rat
621129Olig1oligodendrocyte transcription factor 1113051437930516521Rat
41116111LOC120095614uncharacterized LOC120095614113056240830568186Rat
41273260LOC120095616uncharacterized LOC120095616113057900230704218Rat
41380760LOC120095615uncharacterized LOC120095615113061014830614465Rat
1583177Ifnar2interferon alpha and beta receptor subunit 2113061357630645958Rat
1560373Il10rbinterleukin 10 receptor subunit beta113064649430668081Rat
41210253LOC120095617uncharacterized LOC120095617113067435330678151Rat
7675061LOC102554317uncharacterized LOC102554317113068363130694959Rat
1305399Ifnar1interferon alpha and beta receptor subunit 1113072577430752227Rat
1307532Ifngr2interferon gamma receptor 2113077973330798005Rat
1307561Tmem50btransmembrane protein 50B113080483530837675Rat
1309013SonSON DNA and RNA binding protein113085089030923167Rat
1359589Dnajc28DnaJ heat shock protein family (Hsp40) member C28113085556630858386Rat
1308717Gartphosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase113086489630891125Rat
1306823DonsonDNA replication fork stabilization factor DONSON113091983430933150Rat
1310219Cryzl1crystallin zeta like 1113093314030977936Rat
2935Itsn1intersectin 1113097859031160645Rat
621379Atp5poATP synthase peripheral stalk subunit OSCP113116521831171530Rat
41283450LOC120095621uncharacterized LOC120095621113120686331208811Rat
41356493LOC120095620uncharacterized LOC120095620113121099531217665Rat
2322928Mrps6mitochondrial ribosomal protein S6113129535831348483Rat
621530Slc5a3solute carrier family 5 member 3113131384731316293Rat
9394128LOC103693540uncharacterized LOC103693540113138151331395751Rat
41107969LOC120095786U2 spliceosomal RNA113139137131391550Rat
7555402LOC102548079uncharacterized LOC102548079113145618731464103Rat
621383Kcne2potassium voltage-gated channel subfamily E regulatory subunit 2113151717631530026Rat
2299853Smim11small integral membrane protein 11113153325731543002Rat
1560327C11h21orf140similar to human chromosome 21 open reading frame 140113154968931552257Rat
2956Kcne1potassium voltage-gated channel subfamily E regulatory subunit 1113158095131594116Rat
11442325LOC108352307uncharacterized LOC108352307113158259431584124Rat
631338Rcan1regulator of calcineurin 1113162220831702150Rat
727938Clic6chloride intracellular channel 6113173781331780360Rat
41063304LOC120095806U6 spliceosomal RNA113179754531797651Rat
2283Runx1RUNX family transcription factor 1113183988032074427Rat
7605601LOC102548550uncharacterized LOC102548550113217418932178241Rat
7601414LOC102549086uncharacterized LOC102549086113261356632623374Rat
2325478Mir802microRNA 802113262652532626620Rat
1562683RGD1562683RGD1562683113280365432816291Rat
619899Setd4SET domain containing 4113282950932859162Rat
41227328LOC120095803U4 spliceosomal RNA113284606532846217Rat
2286Cbr1carbonyl reductase 1113286057132862981Rat
1583715Trub2-ps1TruB pseudouridine synthase family member 2, pseudogene 1113287189332873147Rat
41210949Cbr1l1carbonyl reductase 1 like 1113287656332884234Rat
6502456Trub2-ps3TruB pseudouridine synthase family member 2, pseudogene 3113288797432889228Rat
7631561Cbr1l2carbonyl reductase 1 like 2113289264032895277Rat
41127113Trub2-ps6TruB pseudouridine synthase family member 2, pseudogene 6113296589532966834Rat
2321756Cbr1l3carbonyl reductase 1 like 3113298513632992000Rat
1309728Cbr3carbonyl reductase 3113300861533016877Rat
1306097Dop1bDOP1 leucine zipper like protein B113302437633125931Rat
1306466Ifitm3-ps2interferon induced transmembrane protein3, pseudogene 2113313714633137562Rat
1307924Morc3MORC family CW-type zinc finger 3113315190633194650Rat
1307634Chaf1bchromatin assembly factor 1 subunit B113320089433221076Rat
1309165Cldn14claudin 14113323228133329440Rat
41114239LOC120095564uncharacterized LOC120095564113339300433397850Rat
7542458LOC102546699uncharacterized LOC102546699113340815833414119Rat
1308016Sim2SIM bHLH transcription factor 2113341421833453663Rat
1565360Hlcsholocarboxylase synthetase113345580633635197Rat
11459335LOC108352309small nuclear ribonucleoprotein F-like113353361433533927Rat
1308788Ripply3ripply transcriptional repressor 3113364847133656587Rat
1307205Pigpphosphatidylinositol glycan anchor biosynthesis, class P113368294333689111Rat
1308654Ttc3tetratricopeptide repeat domain 3113368911933788976Rat
41081753LOC120095762U1 spliceosomal RNA113374920433749367Rat
1306879Vps26cVPS26 endosomal protein sorting factor C113381346733841883Rat
2528Dyrk1adual specificity tyrosine phosphorylation regulated kinase 1A113389070634009420Rat
40933433LOC120095638uncharacterized LOC120095638113403870834054691Rat
2959Kcnj6potassium inwardly-rectifying channel, subfamily J, member 6113406170234308758Rat
7642969LOC102550239uncharacterized LOC102550239113410389234135702Rat
41381986LOC120095639uncharacterized LOC120095639113427641834285077Rat
1594265Hsp90ab1-ps22heat shock protein 90 alpha family class B member 1, pseudogene 22113434060334342740Rat
11450454LOC108352313uncharacterized LOC108352313113435559134410861Rat
41166587LOC120095565uncharacterized LOC120095565113448276334487531Rat
7712236LOC102550135uncharacterized LOC102550135113449810434579531Rat
621662Kcnj15potassium inwardly-rectifying channel, subfamily J, member 15113457739734621725Rat
621108ErgETS transcription factor ERG113467861434900951Rat
41068989LOC120095800U4 spliceosomal RNA113487271634872838Rat
41221339LOC120095640uncharacterized LOC120095640113500624235012335Rat
1584977Ets2ETS proto-oncogene 2, transcription factor113502153635038322Rat
9160900LOC103693523uncharacterized LOC103693523113506680235079447Rat
11377006LOC108352314uncharacterized LOC108352314113509272635118544Rat
1305454Psmg1proteasome assembly chaperone 1113527608035285541Rat
1309030Brwd1bromodomain and WD repeat domain containing 1113528636435378768Rat
7489015Mir6324microRNA 6324113533182035331940Rat
1307761Hmgn1high mobility group nucleosome binding domain 1113542232835428247Rat
735104Get1guided entry of tail-anchored proteins factor 1113543855535460156Rat
1562512Lca5llebercilin LCA5 like113546064635495133Rat
1563599Sh3bgrSH3 domain binding glutamate-rich protein113550366335527853Rat
1306727B3galt5Beta-1,3-galactosyltransferase 5113558427335630922Rat
7489018Mir6325microRNA 6325113567919635679336Rat
1359642Igsf5immunoglobulin superfamily, member 5113568651335729396Rat
1592358Itgb2l-ps1integrin beta-2-like, pseudogene 1113574170735758826Rat
3271Pcp4Purkinje cell protein 4113575971135861725Rat
619992DscamDS cell adhesion molecule113592192436507100Rat
7740143LOC102551331uncharacterized LOC102551331113622115136233362Rat
41186609Tsnax-ps1translin-associated factor X, pseudogene 1113631775236318634Rat
41158912LOC120095542uncharacterized LOC120095542113635272336363724Rat
41366650LOC120095544uncharacterized LOC120095544113648075436482857Rat
1303241Bace2beta-secretase 2113670744736789550Rat
3127Mx1MX dynamin like GTPase 1113679965936825209Rat
1311662Fam3bFAM3 metabolism regulating signaling molecule B113683153236863902Rat
628821Mx2MX dynamin like GTPase 2113690569836936308Rat
620766Tmprss2transmembrane serine protease 2113693430636973779Rat
41188497LOC120095741small nucleolar RNA SNORA48113705383037053976Rat
3220Oaz1-ps1ornithine decarboxylase antizyme 1, pseudogene 1113708458637085595Rat
11375877LOC108352390uncharacterized LOC108352390113710922437111370Rat
1311691Ripk4receptor-interacting serine-threonine kinase 4113712255537144799Rat
1310055Prdm15PR/SET domain 15113716460837225172Rat
735112C2cd2C2 calcium-dependent domain containing 2113722532137289741Rat
40936948Rps17-ps5ribosomal protein S17, pseudogene 5113729460537308944Rat
1310841Zbtb21zinc finger and BTB domain containing 21113731233737327040Rat
1586131Lrrc57-ps2leucine rich repeat containing 57, pseudogene 2113734419437344901Rat
6495041Fignl2-ps1fidgetin-like 2, pseudogene 1113738458337405340Rat
11415410Pdcd7-ps1programmed cell death 7, pseudogene 1113745712637474155Rat
41156722Nsun3-ps1NOP2/Sun RNA methyltransferase 3, pseudogene 1113746409237477551Rat
2322119Nsun3NOP2/Sun RNA methyltransferase 3113749083237575607Rat
41268022Psrc1-ps1proline and serine rich coiled-coil 1, pseudogene 1113756610637567122Rat
1565472Tmem127l1transmembrane protein 127 like 1113767967537680635Rat
41076501LOC120095714U6 spliceosomal RNA113768280437682913Rat
2320506Eif1a-ps3eukaryotic translation initiation factor 1A, pseudogene 1113783704637894987Rat
1564179Pgk1-ps11phosphoglycerate kinase 1, pseudogene 11113803209138033326Rat
40958082LOC120095759small nucleolar RNA SNORA17113828573538285868Rat
9295737LOC103693547uncharacterized LOC103693547113835449438385411Rat
1583651Pkm-ps15pyruvate kinase M1/2, pseudogene 15113840386538405544Rat
1559516Rps2-ps38ribosomal protein S2, pseudogene 38113842172838422600Rat
7705653LOC102555459uncharacterized LOC102555459113845862338542106Rat
1583614Pes1-ps3pescadillo ribosomal biogenesis factor 1, pseudogene 3113877388338774944Rat
9071267LOC103693548uncharacterized LOC103693548113935295039365668Rat
41132892LOC120095808U6 spliceosomal RNA113948477239484878Rat
1562187Vta1-ps1vesicle trafficking 1, pseudogene 1113961314839614071Rat
1304614Epha6Eph receptor A6113975750140708901Rat
41272276LOC120095545uncharacterized LOC120095545113977562839777087Rat
7604183Acat2-ps1acetyl-CoA acetyltransferase 2, pseudogene 1114038078840382809Rat
41385321LOC120095724U7 small nuclear RNA114054666740546725Rat
1305535Arl6ARF like GTPase 6114071187840738254Rat
1305628Crybg3crystallin beta-gamma domain containing 3114074919840861753Rat
708521Riox2ribosomal oxygenase 2114086136540884782Rat
1584981Nlrp4a-ps1NLR family, pyrin domain containing 4A, pseudogene 1114088428140905699Rat
621564Gabrr3gamma-aminobutyric acid type A receptor subunit rho3114090281240955263Rat
1333369Or5ac25olfactory receptor family 5 subfamily AC member 25114099973441000654Rat
1333619Or5ac24olfactory receptor family 5 subfamily AC member 24114100899041009910Rat
1333309Or5ac23olfactory receptor family 5 subfamily AC member 23114101703341017950Rat
1332924Or5ac23bolfactory receptor family 5 subfamily AC member 23B114103367041034587Rat
1333081Or5ac22olfactory receptor family 5 subfamily AC member 22114105917041060087Rat
1334206Or5ac21olfactory receptor family 5 subfamily AC member 21114107561241076532Rat
1333204Or5ac20-ps1olfactory receptor family 5 subfamily AC member 20, pseudogene 1114111185341112768Rat
1334340Or5h26olfactory receptor family 5 subfamily H member 26114113428641135215Rat
1333449Or5h27olfactory receptor family 5 subfamily H member 27114115137241157144Rat
41029306LOC120095566olfactory receptor 5AC1-like114116051841161438Rat
1334226Or5ac19olfactory receptor family 5 subfamily AC member 19114118427841185201Rat
1333463Olr1537olfactory receptor 1537114121143641212356Rat
1332608Or5h27bolfactory receptor family 5 subfamily H member 27B114123137741232306Rat
1333239Or5h26bolfactory receptor family 5 subfamily H member 26B114124218241243111Rat
1332965Or5k3olfactory receptor family 5 subfamily K member 3114125902641259952Rat
2321335Dppa2l-ps1developmental pluripotency-associated 2 like, pseudogene 1114128999041291084Rat
1334428Or5ac15olfactory receptor family 5 subfamily AC member 15114129629641297216Rat
1332699Or5h25c-ps1olfactory receptor family 5 subfamily H member 25C, pseudogene 1114131677641317700Rat
1333347Or5h25bolfactory receptor family 5 subfamily H member 25B114133311241334035Rat
1334123Or5h25olfactory receptor family 5 subfamily H member 25114135634641357269Rat
1333633Or5h25dolfactory receptor family 5 subfamily H member 25D114136705141367974Rat
1333775Or5h24olfactory receptor family 5 subfamily H member 24114137800041378923Rat
1333231Or5h24bolfactory receptor family 5 subfamily H member 24B114138858541389508Rat
1333850Or5h19-ps1olfactory receptor family 5 subfamily H member 19, pseudogene 1114140506841405998Rat
1333073Or5h18olfactory receptor family 5 subfamily H member 18114140519441423800Rat
1333634Or5bv1-ps1olfactory receptor family 5 subfamily BV member 1, pseudogene 1114142793941428782Rat
1332847Or5h17olfactory receptor family 5 subfamily H member 17114146211641463045Rat
1332676Or5at2-ps1olfactory receptor family 5 subfamily AT member 2, pseudogene 1114148826041489090Rat
1332966Or5h17bolfactory receptor family 5 subfamily H member 17B114149485741503724Rat
1332787Or5at1-ps1olfactory receptor family 5 subfamily AT member 1, pseudogene 1114151110141512226Rat
1332995Or5h17colfactory receptor family 5 subfamily H member 17C114151786541518794Rat
1333626Or5k17olfactory receptor family 5 subfamily K member 17114158879541589748Rat
1333528Or5k16olfactory receptor family 5 subfamily K member 16114160071641601669Rat
1333735Or5k15olfactory receptor family 5 subfamily K member 15114161240141613354Rat
1333804Or5k8olfactory receptor family 5 subfamily K member 8114164417641645105Rat
1333929Or5k14olfactory receptor family 5 subfamily K member 14114166915541670084Rat
1332816Olr1563olfactory receptor 1563114172396541724894Rat
1333068Olr1564olfactory receptor 1564114175630441757230Rat
1588125Or5k1-ps1olfactory receptor family 5 subfamily K member 1, pseudogene 1114182633741827302Rat
41374848LOC120095756small nucleolar RNA SNORA17114184305941843187Rat
1359273Cldnd1claudin domain containing 1114188312041889471Rat
1306639Gpr15G protein-coupled receptor 15114189830041899646Rat
1311817Cpoxcoproporphyrinogen oxidase114193658541946568Rat
1590640Ftdc2ferritin domain containing 2114196794741973373Rat
11424835LOC108352322ferritin heavy chain-like114198171941990330Rat
1303279St3gal6ST3 beta-galactoside alpha-2,3-sialyltransferase 6114206128242121801Rat
11379447LOC108352323uncharacterized LOC108352323114210220042107136Rat
620543Dcbld2discoidin, CUB and LCCL domain containing 2114212552542179927Rat
41319680LOC120095647uncharacterized LOC120095647114212974442136208Rat
1590575Rps28l1ribosomal protein S28 like 1114225453342260302Rat
1589464Mapk3-ps3mitogen activated protein kinase 3, pseudogene 3114235289542364220Rat
1597040Ptma-ps7prothymosin alpha, pseudogene 7114237405442374940Rat
40945973LOC120095648uncharacterized LOC120095648114249835442535259Rat
41238407LOC120095745small nucleolar RNA SNORA17114266317342663305Rat
1309361Col8a1collagen type VIII alpha 1 chain114277685142906432Rat
1309437Cmss1cms1 ribosomal small subunit homolog114293439043232624Rat
1565927Filip1lfilamin A interacting protein 1-like114293735343177085Rat
1306090Tmem30ctransmembrane protein 30C114323966143258506Rat
11393230Rps13-ps3ribosomal protein S13, pseudogene 3114325865143260045Rat
1586130Rpsa-ps2ribosomal protein SA, pseudogene 2114327873543279707Rat
1307925Tbc1d23TBC1 domain family, member 23114330335543361507Rat
41238602Trnaa-agc25transfer RNA alanine (anticodon AGC) 25114331457243314644Rat
11409922LOC108352326ribosome biogenesis protein NSA2 homolog pseudogene114336196643362910Rat
1310494Nit2nitrilase family, member 2114336383943378713Rat
1303049Tomm70translocase of outer mitochondrial membrane 70114337871943417166Rat
11483287LOC108352328uncharacterized LOC108352328114341746543429188Rat
1310935Tmem45a2transmembrane protein 45A2114348350943527025Rat
7674515Rpl5-ps5ribosomal protein L5, pseudogene 5114352181643522837Rat
2320136Ube2i-ps2ubiquitin-conjugating enzyme E2I, pseudogene 2114362998243656632Rat
2323126Lnp1leukemia NUP98 fusion partner 1114366087343678727Rat
2320082Pdcd6ip-ps1programmed cell death 6 interacting protein, pseudogene114369678943697489Rat
6495353Tmem45atransmembrane protein 45A114371330943799526Rat
41302083Tceal9-ps1transcription elongation factor A like 9, pseudogene 1114372690443727543Rat
9999453Rps27a-ps21ribosomal protein S27a, pseudogene 21114373744943738184Rat
1307217Adgrg7adhesion G protein-coupled receptor G7114380810143877539Rat
1309751Tfgtrafficking from ER to golgi regulator114388554243911976Rat
1562717Abi3bpABI family member 3 binding protein114391218744128888Rat
1596981Caprin1-ps1cell cycle associated protein 1, pseudogene 1114427547744278213Rat
708358Impg2interphotoreceptor matrix proteoglycan 2114431883644418382Rat
1305510Senp7SUMO specific peptidase 7114442373344584129Rat
41249040Mrpl45-ps1mitochondrial ribosomal protein L45, pseudogene 1114453673944538285Rat
41063052LOC120095650uncharacterized LOC120095650114456363144582482Rat
1306333Trmt10ctRNA methyltransferase 10C, mitochondrial RNase P subunit114458438844589466Rat
41314188LOC120095729small nucleolar RNA SNORA70114458628844586425Rat
1563775PcnpPEST proteolytic signal containing nuclear protein114459276644607372Rat
1308275Zbtb11zinc finger and BTB domain containing 11114459869444652559Rat
11463329Gng5-ps4G protein subunit gamma 5, pseudogene 4114462721344627733Rat
41278412LOC120095738small nucleolar RNA SNORA29114463205844632191Rat
10395320Zbtb11os1zinc finger and BTB domain containing 11, opposite strand 1114465034344652085Rat
621191Rpl24ribosomal protein L24114465393744659346Rat
1307400Cep97centrosomal protein 97114468350344711471Rat
1584648Nxpe3neurexophilin and PC-esterase domain family, member 3114472690544777694Rat
41055807Ap3s1-ps1adaptor related protein complex 3 subunit sigma 1, pseudogene 1114475353644754188Rat
1310834NfkbizNFKB inhibitor zeta114478267644810722Rat
41021352LOC120095713U6 spliceosomal RNA114485825244858353Rat
11512909LOC108352329uncharacterized LOC108352329114487172844878921Rat
41380577LOC120095651uncharacterized LOC120095651114489505144900728Rat
11459578Trnap-agg13transfer RNA proline (anticodon AGG) 13114541892345418997Rat
1308138Zpld1zona pellucida-like domain containing 1114548288345524555Rat
41034586LOC120095796U2 spliceosomal RNA114588069545880867Rat
2321510Eef1akmt4-ps1EEF1A lysine methyltransferase 4, pseudogene 1114632249946324498Rat
40982162LOC120095720small nucleolar RNA SNORA71114638078246380914Rat
40936001LOC120095816U6 spliceosomal RNA114659427246594378Rat
41045040LOC120095758small nucleolar RNA SNORA17114660723246607355Rat
41263068LOC120095767small nucleolar RNA SNORA17114660766746607801Rat
41081391LOC120095804U5 spliceosomal RNA114715126247151354Rat
1564519Hmgb2l1high mobility group box 2-like 1114725258347253646Rat
41102808LOC120095652uncharacterized LOC120095652114730688947314714Rat
1586129Nr5a2-ps2nuclear receptor subfamily 5, group A, member 2, pseudogene 2114750371947505369Rat
41240667LOC120095769small nucleolar RNA SNORA17114778177647781888Rat
1586128Cluap1-ps1clusterin associated protein 1, pseudogene 1114782705248009762Rat
41234104LOC120095771small nucleolar RNA SNORA17114798842447988511Rat
619972Alcamactivated leukocyte cell adhesion molecule114833612348536296Rat
620535CblbCbl proto-oncogene B114858987848756940Rat
6487995LOC100912248uncharacterized LOC100912248114880712248808230Rat
9148111LOC103693556uncharacterized LOC103693556114963670549651884Rat
40962625LOC120095787U2 spliceosomal RNA114971117149711350Rat
6504246LOC100909405uncharacterized LOC100909405115007456050080929Rat
40949177LOC120095653uncharacterized LOC120095653115011230950118393Rat
7583323LOC102548829uncharacterized LOC102548829115014160950243532Rat
1559779Ccdc54coiled-coil domain containing 54115022421650227313Rat
41214868LOC120095654uncharacterized LOC120095654115023706450243649Rat
41375836LOC120095655uncharacterized LOC120095655115029394850317209Rat
41178532LOC120095707U6 spliceosomal RNA115034518850345302Rat
1309769BbxBBX high mobility group box domain containing115038124950628934Rat
1585855Rpl26-ps9ribosomal protein L26, pseudogene 9115055197650552471Rat
41010029LOC120095656uncharacterized LOC120095656115084648050881941Rat
2308Cd47Cd47 molecule115090605250970000Rat
11492405LOC108352331uncharacterized LOC108352331115100272051011181Rat
1305947Ift57intraflagellar transport 57115105152051124909Rat
11472061Hhla2HHLA2 member of B7 family115125768151271408Rat
6501029Myh15l1myosin, heavy chain 15 like 1115133487051461768Rat
6500618LOC100909977leukocyte surface antigen CD47-like115155488051619586Rat
1565858Myh15myosin, heavy chain 15115162192451763037Rat
41306467LOC120095735small nucleolar RNA SNORA44115167372751673834Rat
1310335Cip2acellular inhibitor of PP2A115179214351823016Rat
1563278Dzip3DAZ interacting zinc finger protein 3115182323551893353Rat
727934Retnlgresistin-like gamma115193094851932680Rat
68349Retnlaresistin like alpha115196172651963527Rat
1624215Retnlbresistin like beta115198348251985368Rat
1563011Trat1T cell receptor associated transmembrane adaptor 1115203575052077805Rat
1565610Morc1MORC family CW-type zinc finger 1115217876952384255Rat
11414924LOC10835239360S ribosomal protein L9 pseudogene115238857852389155Rat
1588602Rplp0-ps8ribosomal protein lateral stalk subunit P0, pseudogene 8115246717852468125Rat
1595098Rps15-ps14ribosomal protein S15, pseudogene 14115252353152523970Rat
1589201Dppa2developmental pluripotency-associated 2115254902452556740Rat
1595070Dppa4developmental pluripotency associated 4115257027952578779Rat
2322285H3f3a-ps9H3.3 histone A, pseudogene 9115264725052648006Rat
40927137LOC120095721U7 small nuclear RNA115269231252692371Rat
1593835Eif4a1-ps4eukaryotic translation initiation factor 4A1, pseudogene 4115276342352764465Rat
9460259LOC103693561zinc finger CCHC domain-containing protein 10 pseudogene115288807452888596Rat
41135138LOC120095817U6 spliceosomal RNA115293808652938192Rat
1588023Cfl1-ps11cofilin 1, pseudogene 11115307688853077384Rat
1593796Rpl3-ps3ribosomal protein L3, pseudogene 3115323777453279583Rat
40998757LOC120095568uncharacterized LOC120095568115335828053373353Rat
41034013LOC120095820U6 spliceosomal RNA115339016753390269Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
11026D11Wox9153113708449637084649Ratregion
33792D11Mit2256113015999530160257Ratregion
33899D11Mit4102112183661521836709Ratregion
34003D11Mit3138112627791326278047Ratregion
34130D11Mgh6100111897620818976310Ratregion
33642D11Mit1123113491804134918164Ratregion
33642D11Mit1123113491804134918164Ratregion
35989D11Rat29145111342715713427302Ratregion
35989D11Rat29145111342715713427540Ratregion
36065D11Rat6156114428575944285911Ratregion
36095D11Rat7156114545932345459484Ratregion
36346D11Mit10229113283509832835327Ratregion
37516D11Rat39202113714899437149196Ratregion
35224D11Rat23174113765532137655495Ratregion
35298D11Rat18154112935426129354413Ratregion
35323D11Rat24138113093660530936743Ratregion
35441D11Rat48235113718413537184372Ratregion
35483D11Rat15169112952841829528587Ratregion
35565D11Rat20143111647204716472185Ratregion
36820D11Rat9162113910762339107778Ratregion
36906D11Rat17150112767241027672532Ratregion
37070D11Rat28246111304993113050172Ratregion
37904D11Rat36136113250788932508021Ratregion
34793D11Rat11150113279608632796236Ratregion
34811D11Rat13134113107111231071247Ratregion
34916D11Rat26147112666978226669935Ratregion
34929D11Rat19166112648866726488833Ratregion
34987D11Rat97134113410700034107128Ratregion
35152D11Rat21180112455591124556101Ratregion
35581D11Rat80167111085332610853485Ratregion
35679D11Rat16166113008569630085847Ratregion
35933D11Rat12145113123913431239277Ratregion
39698D11Rat67143114480316144803318Ratregion
39808D11Rat85249114030416940304418Ratregion
38250D11Rat44203112993471629934913Ratregion
40546D11Rat71162114094618840946344Ratregion
40696D11Rat73110112933571729335819Ratregion
38678D11Rat40240111580806315808309Ratregion
38678D11Rat40240111580806315808402Ratregion
39198D11Rat35230113610921436109441Ratregion
39440D11Rat77116111897199818972110Ratregion
39562D11Rat84149113765532437655473Ratregion
41242D11Rat79156111352863213528786Ratregion
41428D11Rat68156114578037245780540Ratregion
41450D11Rat72134113248934832489473Ratregion
42942D11Rat116126111671706616717194Ratregion
42943D11Rat113248111325183513252084Ratregion
42944D11Rat112143111589081915890978Ratregion
42945D11Rat100214111818514118185343Ratregion
42947D11Rat99222112549136025491589Ratregion
42948D11Rat98128113022318730223321Ratregion
42949D11Rat110210113062291830623084Ratregion
42950D11Rat109200114239671342396899Ratregion
42375D11Rat114243113332269233322937Ratregion
40822D11Rat70236113808380838084050Ratregion
40928D11Rat76249112691863526918897Ratregion
40990D11Rat74110112939573329395853Ratregion
41544D11Rat75150112962882629629090Ratregion
41544D11Rat75150112962894229629090Ratregion
41634D11Rat96171114191806341918216Ratregion
41734D11Rat101245111283104612831293Ratregion
44877D11Got40146114447652844476674Ratregion
44878D16Got11229113567361235673841Ratregion
44880D11Got38250114297814042978390Ratregion
44881D11Got37259114327745143277710Ratregion
44883D11Got39182114393681043936992Ratregion
44884D11Got41213114315041143150624Ratregion
44886D11Got36143113700823437008375Ratregion
44887D11Got84103114063791640638019Ratregion
44888D11Got34267113686859336868860Ratregion
44889D11Wox10107114193600541936116Ratregion
44890D11Got35190114219155842191749Ratregion
44893D11Got13188111800153518001723Ratregion
44894D11Got25177113353706033537232Ratregion
44895D11Got19194113354659333546787Ratregion
44896D11Got27271113323184633232121Ratregion
44897D11Got28142113273386832734009Ratregion
44898D11Got29207113149925331499460Ratregion
44901D11Got24139112969269829692837Ratregion
44902D11Got23199113015998530160184Ratregion
44903D11Got22166112921814829218314Ratregion
44904D11Got20164112962889729629061Ratregion
44906D11Got17114112700745727007571Ratregion
44908D11Got16219112380721823807437Ratregion
44909D11Got14127112409693524097059Ratregion
44913D11Got10150111313823913138389Ratregion
44914D11Got12185111087870410878889Ratregion
44915D11Got9136111276913512769271Ratregion
44916D11Got11203111099601010996213Ratregion
44917D11Got81721193681549368325Ratregion
625767D11Got18249112627680526277056Ratregion
59991D11Got21184113011982530120013Ratregion
59993D11Got31167113918618739186354Ratregion
60009D11Got83111113893457538934686Ratregion
66440D11Uia4203113762809737628308Ratregion
66626D11Mco3220112776969727769913Ratregion
66629D11Mco5220113082446630824687Ratregion
66629D11Mco5220113082446630824850Ratregion
66632D11Mco6350113422774434228097Ratregion
66635D11Mco7130111337177013371898Ratregion
67238D11Arb9217113436157934361798Ratregion
1630182D11Got114223113675121036751433Ratregion
1631039D11Got130184115051771750517895Ratregion
1631197D11Got136192113047629330476492Ratregion
1631275D11Got105110115028508750285197Ratregion
1631569D11Got119125115046488450465006Ratregion
1632029D11Got113142111187749111877630Ratregion
1633624D11Got101209111417408814174297Ratregion
1627743D11Got100199111483252614832721Ratregion
1627748D11Got129245114942585249426096Ratregion
1628752D11Got132147115264224452642391Ratregion
1628752D11Got132147115264224452643075Ratregion
1628872D11Got115253115070813050708378Ratregion
1629061D11Got133180114792332247923502Ratregion
1630052D11Got107260115051547050515730Ratregion
1638489D11Got141158113645733936457497Ratregion
1639262D11Got102248113535262635352874Ratregion
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5504244AL033711123112525575425255877Ratregion
5504127Adamts10112493466924935861Ratregion
5504187UniSTS:2596430112666866726669475Ratregion
5504817ha21530113711195437112178Ratregion
5505508RH666070114213827642139144Ratregion
5505897UniSTS:49601992113562611735626209Ratregion
5505718UniSTS:490518619112862665728627276Ratregion
5505828UniSTS:49584351113693707436937125Ratregion
5506276RH47149684113257868632579370Ratregion
5506366UniSTS:478959215112741300127413216Ratregion
5506495AFM286zb11139113320747333208612Ratregion
5506656ECD017300113089916530900021Ratregion
5506656ECD017300113089916530900052Ratregion
5507007fj02a09.x10114321282643213450Ratregion
5507007fj02a09.x10114321284643213450Ratregion
5500019UniSTS:236171108112741418327414291Ratregion
5500186REN19887234113533925735339491Ratregion
5500188REN19888207113533946735339674Ratregion
5500314GDB:185158282112402009224020374Ratregion
5500316GDB:185159326112402035424020680Ratregion
5500362GDB:335409169113092294230923111Ratregion
5500380GDB:371657918113287118232872100Ratregion
5500380GDB:371657918113288726432888181Ratregion
5502349RH124562159114188330941883468Ratregion
5502813JAM2122112387688823877010Ratregion
5500751D10S2241399112718818527189584Ratregion
5500917REN85711228113090105530901283Ratregion
5500919REN85712236113090125030901486Ratregion
5500921REN85731257113090558030905837Ratregion
5500923REN85732261113090581330906074Ratregion
5500615RH1362620114336267243362889Ratregion
5500911REN85702253113089908330899336Ratregion
5500913REN85704250113089955730899807Ratregion
5500915REN85703250113089932930899579Ratregion
5500905REN82086225113024546530245690Ratregion
5500907REN83919237113054877530549014Ratregion
5500909REN85607383113088055430880937Ratregion
5500925REN85733255113090605030906305Ratregion
5500927REN86881246113111482231115068Ratregion
5501331ECD17717276113537836535378641Ratregion
5501331ECD17717276113537836535378641Ratregion
5501474D21S39280113047724930477329Ratregion
5501530ECD24242150113051479030514940Ratregion
5501705NCAM2726112058681920587545Ratregion
5501712ETV21085113503510735036192Ratregion
5501752MARC_11511-11512:1001088403:1461113090070330901164Ratregion
5501846MARC_15619-15620:1017174255:3121113469863334699472Ratregion
5501702APP709112402002224020731Ratregion
5506585BBX90115062320650623296Ratregion
5502907Mapk30114235231542353222Ratregion
5506781G45351289113175754031757829Ratregion
5502815TIAM1188112903369929033887Ratregion
5502269RH124204128113756595037566078Ratregion
5502431RH12481496113092293930923035Ratregion
5502479RH125003330112804411828044448Ratregion
10755482rs107338789111945620519456205Ratregion
11528645rs105204296114107208041072080Ratregion
11528646rs1074208840114063876340638763Ratregion
11528647rs198448974114337633143376331Ratregion
Position Markers

Peak: (D11Rat24)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21130,936,605 - 30,936,743 (+)MAPPER
Rnor_6.01131,851,206 - 31,851,343NCBI
Rnor_5.01135,459,939 - 35,460,076UniSTS
RGSC_v3.41131,665,587 - 31,665,725RGD
RGSC_v3.41131,665,588 - 31,665,725UniSTS
RGSC_v3.11131,704,645 - 31,704,782RGD
Celera1130,604,007 - 30,604,144UniSTS
RH 3.4 Map11176.9RGD
RH 3.4 Map11176.9UniSTS
RH 2.0 Map11458.3RGD
SHRSP x BN Map1112.7099RGD
Cytogenetic Map11q11UniSTS


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
724554Iddm17Insulin dependent diabetes mellitus QTL 170.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)111897620886241447Rat
4889859Pur28Proteinuria QTL 2819.50.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)114545932375190161Rat
10755497Bp388Blood pressure QTL 3882.76arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)111945620576331918Rat
10058952Gmadr6Adrenal mass QTL 62.290.0072adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)112295940367959403Rat
1600394Edcs1Endometrial carcinoma susceptibility QTL12.90.04uterus morphology trait (VT:0001120)percentage of study population developing endometrioid carcinoma during a period of time (CMO:0001759)111897620824697116Rat
2298551Neuinf10Neuroinflammation QTL 103.7nervous system integrity trait (VT:0010566)spinal cord beta-2 microglobulin mRNA level (CMO:0002125)113123913478851519Rat
1558659Tescar1Testicular tumor resistance QTL 13.9testis integrity trait (VT:0010572)percentage of study population developing testis tumors during a period of time (CMO:0001261)11104193166113562Rat
2312566Glom20Glomerulus QTL 203.60.001kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)114428575982566702Rat
724563Uae10Urinary albumin excretion QTL 106urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)112767241082846715Rat
1581572Uae35Urinary albumin excretion QTL 350.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)114480331882846466Rat
8694424Bw162Body weight QTL 1623.80.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)112328045668280456Rat
1300110Stl7Serum triglyceride level QTL 74.64blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)112952841882566702Rat
1641927Alcrsp10Alcohol response QTL 10alcohol metabolism trait (VT:0015089)blood ethanol level (CMO:0000535)11843667453436674Rat
1300147Bp187Blood pressure QTL 1873.67arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)11169446234Rat
1598842Glom10Glomerulus QTL 103.4kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)11135331169Rat
70180BpQTLcluster10Blood pressure QTL cluster 103.19arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)113491804179918041Rat
1581565Pur10Proteinuria QTL 100.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)114480331882846466Rat
11528648Bss118Bone structure and strength QTL 1186.6582e-07femur strength trait (VT:0010010)femur ultimate displacement (CMO:0002719)114063876343376331Rat
634341Bw121Body weight QTL 1213.56abdominal fat pad mass (VT:1000711)abdominal fat pad weight (CMO:0000088)11121836709Rat
8694376Bw156Body weight QTL 1562.250.001body lean mass (VT:0010483)lean tissue morphological measurement (CMO:0002184)112328045668280456Rat
724517Uae18Urinary albumin excretion QTL 183.7urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)111647204744285911Rat
1300130Rf20Renal function QTL 204.44kidney glomerulus integrity trait (VT:0010546)kidney glomerulus diameter (CMO:0001166)112952841860324829Rat
2290451Scl58Serum cholesterol level QTL 583.48blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)111283104625121472Rat
1300135Rf19Renal function QTL 193.38blood creatinine amount (VT:0005328)creatinine clearance (CMO:0000765)114094618882566702Rat
9589032Epfw10Epididymal fat weight QTL 109.290.001epididymal fat pad mass (VT:0010421)epididymal fat pad weight to body weight ratio (CMO:0000658)112328045668280456Rat
9590313Scort20Serum corticosterone level QTL 206.510.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)112328045668280456Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general measurement method: spectrophotometric enzyme assay was done to determine the blood ethanol concentration 1334439
qtl_general number of animals used: 70 days old 363 F2 rats inducing agent: intraperitoneal administration of alcohol 3.5 g/kg 1334439
qtl_general software package used: Map Manager QTX 1334439
qtl_statistics Likelihood Ratio: 13.1 1334439