Teswt1 QTL Report (Rattus norvegicus) - Rat Genome Database

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QTL Registration

QTL: Teswt1 (Testicular weight QTL 1) Rattus norvegicus

Symbol: Teswt1
Name: Testicular weight QTL 1
RGD ID: 1641908
Trait: testis mass   (VT:1000644)    
Measurement Type: both testes wet weight   (CMO:0000175)    
LOD Score: 3.28
P Value: Not Available
Variance: Not Available
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2780,221,299 - 94,811,326RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0788,365,265 - 103,867,802RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0788,393,619 - 104,437,717RGDRnor5.0
RGSC_v3.4785,089,895 - 100,273,797RGDRGSC3.4
RGSC_v3.1785,110,626 - 100,308,027RGD
Cross Type: intercross
Strains Crossed: LEXF/Stm 
JBrowse: View Region in Genome Browser (JBrowse)
Model



Candidate Gene Status
Myc is a candidate Gene for Teswt1

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
Experimental Data Annotations     Click to see Annotation Detail View

Clinical Measurement

Experimental Condition

Measurement Method

Vertebrate Trait
testis mass  (IDA)

Rat Strain
LEXF/Stm  (IEA)

References

References - curated
# Reference Title Reference Citation
1. Ept7 influences estrogen action in the pituitary gland and body weight of rats. Kurz SG, etal., Mamm Genome. 2014 Jun;25(5-6):244-52. doi: 10.1007/s00335-014-9504-4. Epub 2014 Jan 22.
2. Quantitative trait loci determining weight reduction of testes and pituitary by diethylstilbesterol in LEXF and FXLE recombinant inbred strain rats. Tachibana M, etal., Exp Anim. 2006 Apr;55(2):91-5.

Region

Genes in Region
The following Genes overlap with this region.    Full Report CSV TAB Printer Analysis Tools
RGD IDSymbolNameChrStartStopSpecies
3130MycMYC proto-oncogene, bHLH transcription factor79359370593598633Rat
69298Enpp2ectonucleotide pyrophosphatase/phosphodiesterase 278620234586325050Rat
69417A1bgalpha-1-B glycoprotein79249393492498460Rat
620010Zhx1zinc fingers and homeoboxes 178958236389611337Rat
631378Aardalanine and arginine rich domain containing protein78336447883369319Rat
621553Ccn3cellular communication network factor 378609400086101022Rat
621487Taf2TATA-box binding protein associated factor 278642261386479616Rat
621596Trib1tribbles pseudokinase 179120657991213126Rat
619802Tnfrsf11bTNF receptor superfamily member 11B78556652085594526Rat
1305806Col14a1collagen type XIV alpha 1 chain78672209386937215Rat
735066Mal2mal, T-cell differentiation protein 278590045385933433Rat
735178Eif3heukaryotic translation initiation factor 3, subunit H78309103783174451Rat
727926Zhx2zinc fingers and homeoboxes 278922635889374266Rat
1304605Slc22a22solute carrier family 22 member 2278872042588750111Rat
3755Sqlesqualene epoxidase79086797390883623Rat
620373Fbxo32F-box protein 3278973142889764997Rat
1304849Atad2ATPase family, AAA domain containing 278963412389676738Rat
2781Has2hyaluronan synthase 278811332688139337Rat
1307728Sntb1syntrophin, beta 178706092687329315Rat
1305156Nsmce2NSE2/MMS21 homolog, SMC5-SMC6 complex SUMO ligase79093611291173435Rat
1307127Trmt12tRNA methyltransferase 1279041784690419472Rat
1309883Mtss1MTSS I-BAR domain containing 179048875190628007Rat
1311362Ntaq1N-terminal glutamine amidase 178968431889704484Rat
1310852RGD1310852similar to RIKEN cDNA 9130401M0178955889089569810Rat
1311883Trps1transcriptional repressor GATA binding 178191666882142733Rat
1307545Anxa13annexin A1378988435689936907Rat
1309369Med30mediator complex subunit 3078400473584026474Rat
1306670Rnf139ring finger protein 13979043972690450911Rat
1307149Colec10collectin subfamily member 1078574489585806368Rat
1307179Utp23UTP23, small subunit processome component78318518783196652Rat
1308282Slc30a8solute carrier family 30 member 878359199383627786Rat
1332703Or8i9-ps1olfactory receptor family 8 subfamily I member 9, pseudogene 178051937080519736Rat
1307114Ndufb9NADH:ubiquinone oxidoreductase subunit B979048094890487367Rat
1563224Tmem65transmembrane protein 6579033699790378930Rat
1561402Samd12sterile alpha motif domain containing 1278476885085064057Rat
1563100RGD1563100similar to KIAA008979194025891942125Rat
1560979Rps12-ps1ribosomal protein S12, pseudogene79126764591268052Rat
1565672MtbpMDM2 binding protein78697321587055775Rat
1565732Rpl31-ps5ribosomal protein L31, pseudogene 578668697286687528Rat
1564169Klhl38kelch-like family member 3878985401589864352Rat
1564703Fer1l6fer-1-like family member 679009356790216907Rat
1564901LOC500876LOC50087679161629791618030Rat
1311835Derl1derlin 178940441389427095Rat
1359587Mrpl13mitochondrial ribosomal protein L1378695154186973147Rat
1586397Rps10-ps16ribosomal protein S10, pseudogene 1678963168989634002Rat
1566354Gapdh-ps95Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 9578611280586113417Rat
1587370Tbc1d31TBC1 domain family, member 3178942735489506894Rat
1587371Ctnnb1-ps1catenin beta 1, pseudogene 178869826088702180Rat
1587372Rpl7-ps18ribosomal protein L7, pseudogene 1878650871986510997Rat
1564515RGD1564515similar to alpha 1B-glycoprotein79231493092318652Rat
1587375Ext1exostosin glycosyltransferase 178437576984654625Rat
1561030DeptorDEP domain containing MTOR-interacting protein78651485986668817Rat
1561749Dscc1DNA replication and sister chromatid cohesion 178648258886498212Rat
1564420Washc5WASH complex subunit 579088419290936096Rat
1562739RGD1562739similar to STELLA79040283290404317Rat
1562236Lratd2LRAT domain containing 279237671392387045Rat
1565606Fam83afamily with sequence similarity 83, member A78952282689547284Rat
1585145Tatdn1TatD DNase domain containing 179044997990481000Rat
1564131RGD1564131similar to solute carrier family 25, member 578880321988804706Rat
1586304Fam91a1family with sequence similarity 91, member A178996955890007546Rat
1584048LOC690120hypothetical protein LOC69012079120524991206171Rat
1594489Ppp2r1b-ps1protein phosphatase 2 scaffold subunit A beta, pseudogene 178425782784259665Rat
1594490Rps3a-ps6ribosomal protein S3a, pseudogene 678341236983413165Rat
1594491Rps16-ps9ribosomal protein S16, pseudogene 978321863783219115Rat
1594529Rad21RAD21 cohesin complex component78328786783314810Rat
1594488Psmb7-ps2proteasome 20S subunit beta 7, pseudogene 278528695685287689Rat
1594788Eef1g-ps7eukaryotic translation elongation factor 1 gamma, pseudogene 778393317183934513Rat
2321290H3f3cH3 histone, family 3C78650108586502124Rat
2323224LOC100363319high mobility group nucleosomal binding domain 278352004683520312Rat
2324771Snw1-ps2SNW domain containing 1, pseudogene 278014008780332987Rat
6487874Rpl13-ps5ribosomal protein L13, pseudogene 578755382387554447Rat
6486559Rpl37a-ps14ribosomal protein L37A, pseudogene 1478943757089438522Rat
6496716Pvt1Pvt1 oncogene79365652893879938Rat
7507053Gapdh-ps72Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 7278581179285814750Rat
7543030LOC102548035uncharacterized LOC10254803579461920794701950Rat
7533260LOC102551999uncharacterized LOC10255199979139760591407240Rat
7665134LOC102552316uncharacterized LOC10255231679174741291753435Rat
7637212Ghitm-ps1growth hormone inducible transmembrane protein, pseudogene 179245969592460814Rat
7644388LOC102553568uncharacterized LOC10255356878928907289294246Rat
7600061Rps27a-ps10ribosomal protein S27a, pseudogene 1078945418289454719Rat
7548946LOC102548754uncharacterized LOC10254875478257677982604720Rat
7551511LOC102553429uncharacterized LOC10255342978936368589373007Rat
7567645LOC102548590uncharacterized LOC10254859078223776582247335Rat
7750896LOC102552490uncharacterized LOC10255249079171694691768010Rat
7724275LOC102549374uncharacterized LOC10254937478979212289798831Rat
7683154LOC102547509uncharacterized LOC10254750979346563393487041Rat
7710569Zcchc9-ps2zinc finger CCHC-type containing 9, pseudogene 278999776890000881Rat
9109499LOC103692934ubiquitin-conjugating enzyme E2 C pseudogene78582632585826798Rat
9379903LOC103690428uncharacterized LOC10369042879038484590389902Rat
9295089LOC103692925uncharacterized LOC10369292579303137893285485Rat
9457468Eif1-ps1eukaryotic translation initiation factor 1, pseudogene 178673517886735670Rat
11458799LOC10835149960S ribosomal protein L15 pseudogene79151969791520695Rat
11437639Trnam-cau2transfer RNA methionine (anticodon CAU) 278951287089512942Rat
11452395LOC108351498uncharacterized LOC10835149879117594191181619Rat
11378131LOC108351495uncharacterized LOC10835149578813720988141630Rat
11477543LOC10835158260S ribosomal protein L15 pseudogene78281934482828097Rat
11483376LOC108351497uncharacterized LOC10835149779119165191198960Rat
41354571LOC120093813uncharacterized LOC12009381378954876389551517Rat
41137420LOC120093650uncharacterized LOC12009365078333277383340980Rat
41167073LOC120093657uncharacterized LOC12009365778632514086332561Rat
41285670LOC120093939U7 small nuclear RNA78667199086672051Rat
41171629LOC120093858uncharacterized LOC12009385878538125985394885Rat
41091710LOC120093932U7 small nuclear RNA78667191886671981Rat
41259774LOC120093985U1 spliceosomal RNA79037444990374604Rat
41119759LOC120093658uncharacterized LOC12009365878704169787043506Rat
41210447LOC120093982small nucleolar RNA SNORA1778379870083798831Rat
41210892LOC120093878keratin-associated protein 10-4-like79031397690317422Rat
41261377LOC120094056U6 spliceosomal RNA79206798292068087Rat
41329869Lsm6-ps1U6 small nuclear RNA and mRNA degradation associated, pseudogene 179232238592338965Rat
41391831LOC120093673uncharacterized LOC12009367379331604693325937Rat
41190574Coa6-ps2cytochrome c oxidase assembly factor 6, pseudogene 278473402184744492Rat
41366091LOC120093668uncharacterized LOC12009366879286029092892964Rat
41393725LOC120093914U6 spliceosomal RNA79169334391693442Rat
41368912LOC120093660uncharacterized LOC12009366079004013990048215Rat
41099658Nusap1-ps1nucleolar and spindle associated protein 1, pseudogene 178889526888898116Rat
41193271LOC120093937U7 small nuclear RNA78968648889686549Rat
41396341LOC120093649uncharacterized LOC12009364978202511382045293Rat
41157576LOC120093667uncharacterized LOC12009366779261620892664552Rat
41070538LOC120093670uncharacterized LOC12009367079299943793076507Rat
41102902Trnak-cuu17transfer RNA lysine (anticodon CUU) 1778734897787349051Rat
41348804Gapdh-ps31Glyceraldehyde-3-phosphate dehydrogenase, pseudogene 3178474473684746963Rat
41400961LOC120093860phosphomannomutase 1-like79348989393490745Rat
41375551LOC120094019U6atac minor spliceosomal RNA79424665794246771Rat
41108340Pgam1-ps4phosphoglycerate mutase 1, pseudogene 479148702691487671Rat
41108830LOC120094009small nucleolar RNA SNORA1779445709694457229Rat
41110337LOC120093662uncharacterized LOC12009366279054245290549865Rat
41339717LOC120093659uncharacterized LOC12009365978903345189129176Rat
40975977LOC120093671uncharacterized LOC12009367179323832593252519Rat
40980018LOC120093857uncharacterized LOC12009385778064606280652572Rat
40931067Gcm1-ps1glial cells missing transcription factor 1, pseudogene 179326131793262492Rat
40959783LOC120093675uncharacterized LOC12009367579451391194565757Rat
40934539LOC120093664uncharacterized LOC12009366479142761691449462Rat
40985792LOC120093906U6 spliceosomal RNA78917736789177472Rat
40986003LOC120093655uncharacterized LOC12009365578492961684938592Rat
41009218LOC120093661uncharacterized LOC12009366179037339690375705Rat
40939717LOC120093970small nucleolar RNA SNORA4878612446586124606Rat
40943775LOC120093986small nucleolar RNA SNORA1778491957684919697Rat
41311443LOC120093988small nucleolar RNA SNORA1779227354192273672Rat
41050819LOC120093918U6 spliceosomal RNA78379568283795784Rat
41319479LOC120093814uncharacterized LOC12009381478985043489854677Rat
41030570LOC120093672uncharacterized LOC12009367279309324193096469Rat
41135575LOC120093651uncharacterized LOC12009365178372558483732362Rat
41335646LOC12009365440S ribosomal protein S25-like78515594385156357Rat
41031164LOC120093656uncharacterized LOC12009365678483629384870077Rat
41222771LOC120093879keratin-associated protein 5-3-like79208875792089368Rat
41223521LOC120094032U2 spliceosomal RNA78378336083783437Rat
41336997LOC120094054U6 spliceosomal RNA79336014193360247Rat
41062197LOC120094018U1 spliceosomal RNA78563665085636794Rat
41226657LOC120093674uncharacterized LOC12009367479377016193787074Rat
41035867LOC120094053U6 spliceosomal RNA79137067191370777Rat
41063713LOC120093663uncharacterized LOC12009366379124652491351728Rat
41018428LOC120094017small nucleolar RNA SNORA1178969178289691908Rat

Markers in Region
The following Markers overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolExpected SizeChrStartStopSpeciesMatch
10935D7Wox1412779359564793595780Ratregion
10936D7Arb579359562793595833Ratregion
10937D7Wox1515579359562093595781Ratregion
10938D7Wox2913579359563393595754Ratregion
10939D7Mit2720679359563193595843Ratregion
33969D7Mit422379481108594811326Ratregion
34555D7Mgh614079141244491412594Ratregion
34713D7Mgh1614079125631191256547Ratregion
33648D7Mit514178022129980221436Ratregion
36015D7Rat2115579128113091281285Ratregion
36932D7Rat1713579479587794796025Ratregion
37642D7Rat11222878519688685197132Ratregion
37710D7Rat19018479032403890324226Ratregion
37808D7Rat8612278315339283153512Ratregion
36442D7Rat2015778986737689867533Ratregion
35787D7Rat4217478400154684001720Ratregion
35841D7Rat1917679324212393242280Ratregion
39702D7Rat16011979350828593508404Ratregion
39938D7Rat14111778359195383592070Ratregion
40068D7Rat16117578400599684006171Ratregion
40116D7Rat16229378255597082556263Ratregion
40348D7Rat14016278989811689898272Ratregion
42213D7Arb1522179141238991412612Ratregion
42836D7Rat20220279113987691140102Ratregion
41186D7Rat13918078492790684928080Ratregion
42342D7Rat23116479075610990756271Ratregion
44272D7Got5815978337455083374709Ratregion
44273D7Got5913978394715283947291Ratregion
44274D7Got6124578528769785287942Ratregion
44275D7Got6022578591358585913810Ratregion
44275D7Got6022578591358585913810Ratregion
44277D7Got6920678878793388788139Ratregion
44278D7Got15021378696127186961484Ratregion
44279D7Got6714278891620788916351Ratregion
44288D7Got7520279273463492734836Ratregion
44289D7Got7211879083629190836410Ratregion
44290D7Got7320779099577390995980Ratregion
44292D7Got7120179130026791300468Ratregion
60584D7Got6224278641483086415072Ratregion
60586D7Got6429978797287187973170Ratregion
60818D7Wox2813178915715689157281Ratregion
67821D7Uwm1216578111622981116402Ratregion
67824D7Uwm1314778519875985198911Ratregion
67828D7Uwm1527878855769688557979Ratregion
67829D7Uwm1618478974027389740457Ratregion
67830D7Uwm1724778979838889798645Ratregion
625818D7Got5720578095578480955989Ratregion
629616D7Hmgc316878556775485567922Ratregion
1638745D7Got25921379173768291737895Ratregion
1638909D7Wox4221179125631191256522Ratregion
7205768UniSTS:22471215578730177787301932Ratregion
7193132MYC29079359646193597750Ratregion
7192370Nov10478609443686095889Ratregion
7192489Myc28079359599893596278Ratregion
7206466Trps170078209987482100574Ratregion
5035939PMC314332P139478811579588116189Ratregion
5036290Ext114378437676484376907Ratregion
5035502AI22972016778336842583368592Ratregion
5035506EST3C713079045021790450347Ratregion
5031392PMC156147P114379359589493596037Ratregion
5034131RH14148018078950667689506856Ratregion
5026172RH131190078474399484744223Ratregion
5026218RH13136718078329371283293892Ratregion
5028905RH14277026779102333191023598Ratregion
5031792AU04713125378518351985183774Ratregion
5026730RH13331818878620255786202745Ratregion
5032082D15Mit18317678659185586592031Ratregion
5032289AI79039513678426145484261590Ratregion
5032309AI44731011578191971081919825Ratregion
5026942RH13412618179120535491205535Ratregion
5027038RH13449419678693687886937075Ratregion
5030037AW53102815678457744084577596Ratregion
5033137RH13773415478328853983288693Ratregion
5028173D15Mit17079359563293595781Ratregion
5030765BF40494218478189656781896751Ratregion
5025732RH12944618079359827293598452Ratregion
5033735RH13992619478936517789365371Ratregion
5053667RH14278113879387820593878343Ratregion
5053687RH14279313078642267286422802Ratregion
5051895RH9472020079359843893598638Ratregion
5055209RH14366919179120664091206831Ratregion
5054869RH14347226879366373693664004Ratregion
5056113RH14419020179053282490533025Ratregion
5055277RH14370820778397328483973491Ratregion
5055277RH14370820778397328483974574Ratregion
5059810BE09795020479000218690002390Ratregion
5059862BF40000522079062253490622754Ratregion
5050152RH13389221978319327183194542Ratregion
5050142RH13388618979086843590868624Ratregion
5050208RH13392420579048923990489444Ratregion
5050274RH13396221578705974987059964Ratregion
5050648RH13417818178328793283288113Ratregion
5051557AV32815212278336916183369283Ratregion
5043648RH13014620278693589286936094Ratregion
5041698RH12900720879000724990007457Ratregion
5044504RH13064118978593163585931825Ratregion
5047516RH13237221878940533889405556Ratregion
5049070RH13326921478958282289583036Ratregion
5049416RH13346820578973041289730617Ratregion
5042020RH12919218679048880890488994Ratregion
5042440RH12943518778695158586951772Ratregion
5043188RH129882078972597289726170Ratregion
5041258RH12875315479115841291158566Ratregion
5043738RH13019821179088336390883574Ratregion
5040480RH12830718178963424589634426Ratregion
5073922RH13771614879003330890033456Ratregion
5075348RH13854316978985942089859589Ratregion
5075538RH13865113478940463489404768Ratregion
5075922RH13887413978308700083087146Ratregion
5076964RH13948121778328853983288756Ratregion
5077242RH13964418178475785884758039Ratregion
5077676RH13989320178610069586100897Ratregion
5077702RH13990818578319642083196605Ratregion
5075668RH13872717878437661184376789Ratregion
5079818RH14122120878972797289728180Ratregion
5080058RH14135918179041913690419317Ratregion
5078926RH14063218079433522094335400Ratregion
5079040RH14070021878704175887042088Ratregion
5073486RH13746420079033787290338072Ratregion
5073006RH13718020578940324089403445Ratregion
5070862RH13474818578954779889547983Ratregion
5072438RH13684915379033637590336528Ratregion
5067590AU04763721379295591392956126Ratregion
5067726AU04757324379031844290318681Ratregion
5067898AU04747028778059999280600275Ratregion
5068508AU04710328078787799087878270Ratregion
5068626AU04703112079208092092081049Ratregion
5068688AU04699410878213196582132073Ratregion
5070029RH9442616178811470688114867Ratregion
5069222AU0466387879324205193242129Ratregion
5069312AU04658129679269776692698057Ratregion
5065126BF40599924878494481784945065Ratregion
5060408BE09801518779089012690890313Ratregion
5062100BF39744115578936998389370138Ratregion
5063546BE10777115079082217090822320Ratregion
5063744BF40496724479104380391044047Ratregion
5063140BI30134218278819538288195564Ratregion
5061514BE10538017878476908084769258Ratregion
5082083BF41597812778516467985164806Ratregion
5086125BM38468915978192148481921643Ratregion
5087436PMC165967P540879359619593596603Ratregion
5086471AA89165014578475776584757910Ratregion
5087434PMC165967P432379359285293593175Ratregion
5087438PMC165967P643079359788793598317Ratregion
5083463BE10011918179121335191213532Ratregion
5089545AU04921919078349123183491421Ratregion
5087211AW5241289079049032490490414Ratregion
5082075BF41592721578674492886745143Ratregion
5082321BE11918318779107738691077573Ratregion
5090671AU04989118978814454788144736Ratregion
5088413AU04855417578473404684734221Ratregion
5080758RH14176519079128429491284484Ratregion
5090009AU04949611178408303184083142Ratregion
5081238RH14204520778943929589439502Ratregion
5081254RH14205419178438020884380399Ratregion
5086614AW53002915178331664083316791Ratregion
5081871BI27390720378610438786104590Ratregion
5081977BE11895615078938383889383988Ratregion
5083940AA89327611678437238084372496Ratregion
5134358D7Uwm2528378113417481134459Ratregion
5503061Ctnnb137778869949688699873Ratregion
5503082Nov12278609427886094400Ratregion
5507513ECD1222555078465396084654510Ratregion
5507515ECD1283052978465454884655077Ratregion
5503224UniSTS:23729731978940562489405943Ratregion
5503228UniSTS:23730420879238638092386588Ratregion
5503892Hsh22378811577188115994Ratregion
5504815ha2170078533471085336306Ratregion
5505306Ppp2r1b39178425913984259515Ratregion
5506076UniSTS:49830023478393359083933824Ratregion
5506987fd54e08.x1116879031757790318746Ratregion
5501137PMC148819P429079359764593597935Ratregion
5500767REN1333124778465398984654236Ratregion
5500763REN1332925578465443884654693Ratregion
5500765REN1332622878465508984655317Ratregion
5501149PMC150726P940379359600393596406Ratregion
5501277PMC187450P1079359562993596103Ratregion
5501556G1598712179359590393596024Ratregion
5505165Trib124879121390691214154Ratregion
5501371STS-Z4144165978550317385503832Ratregion
5501710MYC20479359620293596406Ratregion
Position Markers

Flank 1: (D7Mit5)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2780,221,299 - 80,221,436 (+)MAPPER
Rnor_6.0788,365,265 - 88,365,401NCBI
Rnor_5.0788,393,619 - 88,393,755UniSTS
RGSC_v3.4785,089,895 - 85,090,032RGD
RGSC_v3.4785,089,896 - 85,090,032UniSTS
RGSC_v3.1785,110,626 - 85,110,762RGD
Celera777,115,894 - 77,116,030UniSTS
RH 3.4 Map7539.2UniSTS
RH 3.4 Map7539.2RGD
RH 2.0 Map7467.1RGD
SHRSP x BN Map747.81RGD
FHH x ACI Map736.72RGD
Cytogenetic Map7 RGD
Flank 2: (D7Mit4)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2794,811,085 - 94,811,326 (+)MAPPER
Rnor_6.07103,815,550 - 103,815,788NCBI
Rnor_6.07103,867,558 - 103,867,802NCBI
Rnor_5.07104,385,465 - 104,385,703UniSTS
Rnor_5.07104,437,473 - 104,437,717UniSTS
RGSC_v3.47100,273,558 - 100,273,797RGD
RGSC_v3.47100,273,559 - 100,273,797UniSTS
RGSC_v3.17100,307,789 - 100,308,027RGD
Celera791,443,180 - 91,443,414UniSTS
RH 3.4 Map7657.0RGD
RH 3.4 Map7657.0UniSTS
RH 2.0 Map7534.0RGD
Cytogenetic Map7 RGD


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
634336Anxrr17Anxiety related response QTL 173.66locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)7924703115097879Rat
1643004Pain2Pain QTL 21mechanical nociception trait (VT:0002734)self mutilation severity score (CMO:0002145)7946224698011544Rat
1300132Bp182Blood pressure QTL 1823.49arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)71965431784928080Rat
1300127Srn1Serum renin concentration QTL 13.87blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)72940968384928080Rat
631513Scl7Serum cholesterol level QTL 74.1blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)73796056982960569Rat
61357Bp38Blood pressure QTL 381.60.052arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)741333674119109060Rat
634326Hc3Hypercalciuria QTL 32.1urine calcium amount (VT:0002985)urine calcium excretion rate (CMO:0000763)74278731487787314Rat
10053722Scort27Serum corticosterone level QTL 272.410.0083blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)74322875088228750Rat
1358361Sradr5Stress Responsive Adrenal Weight QTL 55.55adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)743747012108555253Rat
1300179Kidm5Kidney mass QTL 53.51kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)743747012135012528Rat
1300149Cm6Cardiac mass QTL 64.09heart mass (VT:0007028)heart left ventricle weight to body weight ratio (CMO:0000530)743747099102228765Rat
631504Cm27Cardiac mass QTL 273.45heart left ventricle mass (VT:0007031)heart left ventricle wet weight (CMO:0000071)744421311118198041Rat
61428Scl3Serum cholesterol level QTL 33.2blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)74486753389867533Rat
738030Anxrr8Anxiety related response QTL 84.1exploratory behavior trait (VT:0010471)number of entries into a discrete space in an experimental apparatus (CMO:0000960)74659007091590070Rat
2293696Bmd32Bone mineral density QTL 325.10.0001femur strength trait (VT:0010010)femoral neck polar moment of inertia (CMO:0001670)74765143992651439Rat
2293707Bss32Bone structure and strength QTL 327.640.0001femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)74765143992651439Rat
2300178Bmd54Bone mineral density QTL 545.30.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)74765143992651439Rat
2293644Bmd29Bone mineral density QTL 295.40.0001femur size trait (VT:1000369)femoral neck cross-sectional area (CMO:0001697)74765143992651439Rat
2293667Bss42Bone structure and strength QTL 427.250.0001lumbar vertebra size trait (VT:0010518)lumbar vertebra cross-sectional area (CMO:0001689)74765143992651439Rat
2293678Bss24Bone structure and strength QTL 246.710.0001femur morphology trait (VT:0000559)femur cross-sectional area (CMO:0001661)74765143992651439Rat
2293685Bmd21Bone mineral density QTL 214.20.0003femur mineral mass (VT:0010011)total volumetric bone mineral density (CMO:0001728)74765143992651439Rat
1300151Bp181Blood pressure QTL 1813.36arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)753612714103945643Rat
2317035Aia16Adjuvant induced arthritis QTL 162.71joint integrity trait (VT:0010548)right rear ankle joint diameter (CMO:0002150)759238038104238038Rat
1298528Bp169Blood pressure QTL 1690.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)761074194106074194Rat
1559283Emca4Estrogen-induced mammary cancer QTL 43.7mammary gland integrity trait (VT:0010552)percentage of study population developing mammary tumors during a period of time (CMO:0000948)762004452101773158Rat
1576303Ept7Estrogen-induced pituitary tumorigenesis QTL 73.7pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)762004452101773158Rat
70173Niddm19Non-insulin dependent diabetes mellitus QTL 194.330.00005blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)764002457135012528Rat
2316947Rf58Renal function QTL 587.8kidney glomerulus morphology trait (VT:0005325)index of glomerular damage (CMO:0001135)768938720113886318Rat
2316952Pur22Proteinuria QTL 225.2urine protein amount (VT:0005160)urine protein level (CMO:0000591)768938720113886318Rat
2316955Stl24Serum triglyceride level QTL 247.1blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)768938720113886318Rat
631540Bw9Body weight QTL 94.5body mass (VT:0001259)body weight (CMO:0000012)769736226117455174Rat
1357338Stl17Serum triglyceride level QTL 173.23blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)769736356112729554Rat
634331Pia17Pristane induced arthritis QTL 174.7joint integrity trait (VT:0010548)arthritic paw count (CMO:0001460)773829340130221005Rat
7411654Foco25Food consumption QTL 259.30.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)775918751120918751Rat
7411607Foco15Food consumption QTL 150.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)775918751120918751Rat
724537Niddm52Non-insulin dependent diabetes mellitus QTL 520.02blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)78022129993595843Rat
1641908Teswt1Testicular weight QTL 13.28testis mass (VT:1000644)both testes wet weight (CMO:0000175)78022129994811326Rat
631529Tls2T-lymphoma susceptibility QTL 200.001thymus integrity trait (VT:0010555)percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911)780221299109401111Rat
1331746Kidm9Kidney mass QTL 93.934kidney mass (VT:0002707)right kidney wet weight (CMO:0000082)780221299112308525Rat
1331728Bp214Blood pressure QTL 2142.825arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)780221299124373579Rat
1331768Kidm10Kidney mass QTL 104.62096kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)780221299125221299Rat
2317052Aia17Adjuvant induced arthritis QTL 172.13joint integrity trait (VT:0010548)left rear ankle joint diameter (CMO:0002149)781737938126737938Rat
634322Bw12Body weight QTL 120body mass (VT:0001259)body weight (CMO:0000012)783153392128153392Rat
1358891Bp265Blood pressure QTL 2652.21arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)783591953134666232Rat
1358914Bp266Blood pressure QTL 266arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)783591953134666232Rat
71114Niddm14Non-insulin dependent diabetes mellitus QTL 144.5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)784257275129257275Rat
2298475Eau6Experimental allergic uveoretinitis QTL 60.0029uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)784257275129257275Rat
1558655Swd4Spike wave discharge measurement QTL 43.680.0002brain electrophysiology trait (VT:0010557)brain spike-and-wave discharge severity grade (CMO:0001988)786983365131983365Rat
10450828Scl79Serum cholesterol level QTL 793.50.001blood HDL cholesterol amount (VT:0000184)blood low density lipoprotein cholesterol level (CMO:0000053)789867376101773158Rat
1549899Stresp8Stress response QTL 84.370.0008stress-related behavior trait (VT:0010451)defensive burying duration (CMO:0001961)790482196135012528Rat
2299163Iddm34Insulin dependent diabetes mellitus QTL 342.71blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)791281130135012528Rat
631687Hcas1Hepatocarcinoma susceptibility QTL 13.90.001liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)791412594129807172Rat
1331723Bw25Body weight QTL 253.348body mass (VT:0001259)body weight (CMO:0000012)79324212394811326Rat
61397Bw17Body weight QTL 176.3body mass (VT:0001259)body weight (CMO:0000012)793595647106839474Rat
2313102Bmd79Bone mineral density QTL 792.30.0001tibia mineral mass (VT:1000283)total volumetric bone mineral density (CMO:0001728)794811085116738842Rat
1357336Gluco6Glucose level QTL 63.4blood glucose amount (VT:0000188)serum glucose level (CMO:0000543)794811326116294265Rat


Additional Information

RGD Curation Notes
Note Type Note Reference
qtl_cross_type intercross  
qtl_general increase in weight of the pituitary gland was observed after DES treatment 1625009
qtl_general method details: a polystyrene tube was subcutaneously implanted in 4 week old male rats which contained ~17mg of DES, 12 weeks later the animals were sacrificed, testis removed and weighed 1625009
qtl_general software used: Map Manager/Qtb29 1625009
qtl_general inducing agent: diethylstilbesterol (DES) 1625009
qtl_general number of animals used: 21 independent recombinant inbred strains, 9 substrains, 2 parental strains and their F1 hybrids 1625009